+F Repair protein KO
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DNA Repair and Recombination Proteins - Zygosaccharomyces rouxii
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D ZYRO0A09900g hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D ZYRO0A13530g hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D ZYRO0G22418g hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E ZYRO0D13178g hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E ZYRO0B14146g hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E ZYRO0D05566g hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E ZYRO0G02838g hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E ZYRO0C13222g hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F ZYRO0A07524g hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F ZYRO0F01738g hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F ZYRO0E02948g hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E DNA polymerase epsilon complex
F ZYRO0F16412g hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F ZYRO0D01166g hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F ZYRO0D06864g hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F ZYRO0G20878g hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E ZYRO0C15730g hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E ZYRO0G02860g hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E ZYRO0F11572g hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E ZYRO0E01914g hypothetical protein K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E ZYRO0F11924g hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E ZYRO0A07744g hypothetical protein K08075 E3.1.3.32; polynucleotide 3'-phosphatase [EC:3.1.3.32]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F ZYRO0B11572g hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F ZYRO0F05192g hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F ZYRO0C03058g hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
E NER4 complex
F ZYRO0C09548g hypothetical protein K15082 RAD7; DNA repair protein RAD7
F ZYRO0C16544g hypothetical protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F ZYRO0F05918g hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F ZYRO0D11770g hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F ZYRO0D15796g hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F ZYRO0D02992g hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F ZYRO0B06006g hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F ZYRO0D00880g hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F ZYRO0D11726g hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F ZYRO0F06644g hypothetical protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F ZYRO0G08800g hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F ZYRO0F06226g hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F ZYRO0C07502g hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F ZYRO0G05038g hypothetical protein K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F ZYRO0C03058g hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F ZYRO0A03234g hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F ZYRO0E03190g hypothetical protein K10841 ERCC6; DNA excision repair protein ERCC-6
F ZYRO0G16170g hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E ZYRO0G14630g hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E ZYRO0B11836g hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E ZYRO0C14212g hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E ZYRO0A11176g hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E ZYRO0C16016g hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E ZYRO0F11088g hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E ZYRO0B11242g hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E ZYRO0A07062g hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E ZYRO0F13046g hypothetical protein K06634 CCNH; cyclin H
E ZYRO0D13882g hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E ZYRO0G10428g hypothetical protein K07466 RFA1; replication factor A1
E ZYRO0C02948g hypothetical protein K10739 RFA2; replication factor A2
D Other NER factors
E ZYRO0C05522g hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E ZYRO0A00550g hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E ZYRO0A02860g hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E ZYRO0D07788g hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5
E ZYRO0F11572g hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E ZYRO0A01298g hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E ZYRO0G10934g hypothetical protein K03869 CUL3; cullin 3
E ZYRO0F08360g hypothetical protein K03872 ELOC; elongin-C
E ZYRO0F15444g hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E ZYRO0B06160g hypothetical protein K08735 MSH2; DNA mismatch repair protein MSH2
E ZYRO0D17490g hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E ZYRO0B11792g hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E ZYRO0A08800g hypothetical protein K10864 PMS1; DNA mismatch repair protein PMS1
E ZYRO0A07282g hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E ZYRO0C15180g hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
E ZYRO0F07634g hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E ZYRO0A07524g hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E ZYRO0F01738g hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E ZYRO0E02948g hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
D RPA (replication factor A)
E ZYRO0G10428g hypothetical protein K07466 RFA1; replication factor A1
E ZYRO0C02948g hypothetical protein K10739 RFA2; replication factor A2
D RFC (replication factor C)
E ZYRO0F06446g hypothetical protein K10754 RFC1; replication factor C subunit 1
E ZYRO0B06248g hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
E ZYRO0G02002g hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
E ZYRO0F12914g hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
E ZYRO0C02090g hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E ZYRO0C15730g hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E ZYRO0C11110g hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E ZYRO0F11572g hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E ZYRO0F11374g hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E ZYRO0A05918g hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
E ZYRO0F16038g hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E ZYRO0F10054g hypothetical protein K10868 XRS2; DNA repair protein XRS2
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E ZYRO0A05918g hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
E ZYRO0F16038g hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E ZYRO0B03190g hypothetical protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E ZYRO0B03190g hypothetical protein K04482 RAD51; DNA repair protein RAD51
E ZYRO0G14872g hypothetical protein K10957 RAD55; DNA repair protein RAD55
E ZYRO0A04708g hypothetical protein K10958 RAD57; DNA repair protein RAD57
D Rad52 family proteins
E ZYRO0D13772g hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
E ZYRO0B12166g hypothetical protein K10959 RAD59; DNA repair protein RAD59
D Rad54 family proteins
E ZYRO0F04906g hypothetical protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E ZYRO0G12474g hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E ZYRO0E08250g hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E ZYRO0E08250g hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E ZYRO0C04642g hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E ZYRO0A02816g hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E ZYRO0G10428g hypothetical protein K07466 RFA1; replication factor A1
E ZYRO0C02948g hypothetical protein K10739 RFA2; replication factor A2
D Protein phosphatase 4
E ZYRO0G14850g hypothetical protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E ZYRO0C10252g hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E ZYRO0G01584g hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E ZYRO0B12122g hypothetical protein K22804 SMC6; structural maintenance of chromosomes protein 6
E ZYRO0A11110g hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E ZYRO0E03498g hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E ZYRO0G16522g hypothetical protein K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E ZYRO0A07304g hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E ZYRO0C15928g hypothetical protein K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E ZYRO0D11066g hypothetical protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E ZYRO0F09878g hypothetical protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E ZYRO0D10450g hypothetical protein K10991 SWI5; DNA repair protein Swi5/Sae3
E ZYRO0F11044g hypothetical protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E ZYRO0E01804g hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E ZYRO0F10516g hypothetical protein K15079 SLX4; structure-specific endonuclease subunit SLX4
E ZYRO0E08932g hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E ZYRO0E02398g hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E ZYRO0D03938g hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E ZYRO0D16346g hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E ZYRO0G05456g hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E ZYRO0G03938g hypothetical protein K14635 MPH1; ATP-dependent DNA helicase MPH1 [EC:5.6.2.4]
E ZYRO0D05126g hypothetical protein K15080 SAW1; single-strand annealing weakened protein 1
E ZYRO0B09020g hypothetical protein K26124 RTT101; cullin 8
E ZYRO0G10890g hypothetical protein K26122 MMS22; E3 ubiquitin-protein ligase substrate receptor MMS22
E ZYRO0D01496g hypothetical protein K26123 MMS1; E3 ubiquitin-protein ligase linker protein MMS1
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E ZYRO0C14850g hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E ZYRO0G02486g hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E ZYRO0A05918g hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
E ZYRO0F16038g hypothetical protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E ZYRO0F10054g hypothetical protein K10868 XRS2; DNA repair protein XRS2
D DNA Ligase 4 complex
E ZYRO0C07854g hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E ZYRO0G08118g hypothetical protein K10982 LIF1; ligase-interacting factor 1
E ZYRO0C06930g hypothetical protein K10983 NEJ1; non-homologous end-joining protein 1
D X-family DNA polymerases
E ZYRO0E04048g hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E ZYRO0F11924g hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
D Bloom's syndrome complex (BTR)
E ZYRO0E08250g hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E ZYRO0C04642g hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E ZYRO0A02816g hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E ZYRO0B03190g hypothetical protein K04482 RAD51; DNA repair protein RAD51
E ZYRO0C12694g hypothetical protein K11137 TELO2; telomere length regulation protein
E ZYRO0B05984g hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E ZYRO0C09878g hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E ZYRO0F11374g hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D ZYRO0D12452g hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D ZYRO0D04664g hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D ZYRO0F07766g hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
D ZYRO0C15202g hypothetical protein K03508 POLZ2; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D ZYRO0C04950g hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D ZYRO0D08404g hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D ZYRO0A08932g hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D ZYRO0G08228g hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D ZYRO0B11682g hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D ZYRO0C15730g hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D ZYRO0C00616g hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D ZYRO0B11880g hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D ZYRO0B06248g hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
D ZYRO0G02002g hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
D ZYRO0F12914g hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D ZYRO0C02090g hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D ZYRO0C00616g hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
D ZYRO0D14674g hypothetical protein K02544 MEC3; G2-specific checkpoint protein
D ZYRO0G08492g hypothetical protein K06663 DDC1; DNA damage checkpoint protein
C FPC (fork protection complex)
D ZYRO0F16742g hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D ZYRO0F00638g hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D ZYRO0F18480g hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D ZYRO0C12694g hypothetical protein K11137 TELO2; telomere length regulation protein
D ZYRO0B02222g hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D ZYRO0C06886g hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D ZYRO0B03982g hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D ZYRO0B09196g hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D ZYRO0A07546g hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D ZYRO0F01056g hypothetical protein K02555 MIH1; M-phase inducer tyrosine phosphatase [EC:3.1.3.48]
D ZYRO0B11990g hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D ZYRO0F07370g hypothetical protein K02831 RAD53; ser/thr/tyr protein kinase RAD53 [EC:2.7.11.-]
D ZYRO0A09438g hypothetical protein K06661 RAD9; DNA repair protein RAD9
D ZYRO0C17270g hypothetical protein K02543 MEC1; cell cycle checkpoint protein MEC1
D ZYRO0F08712g hypothetical protein K15081 AMN1; antagonist of mitotic exit network protein 1
D ZYRO0C12078g hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D ZYRO0C00528g hypothetical protein K24663 NDD1; nuclear division defective protein 1
D ZYRO0A01254g hypothetical protein K24664 FKH; forkhead protein FKH
D ZYRO0D01210g hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D ZYRO0F00440g hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D ZYRO0A08514g hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D ZYRO0F08910g hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
C PSO4 complex
D ZYRO0G07898g hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D ZYRO0F09526g hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D ZYRO0F07282g hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D ZYRO0D15356g hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D ZYRO0C08514g hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D ZYRO0F10956g hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D ZYRO0G14388g hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D ZYRO0A09900g hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D ZYRO0A13530g hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D ZYRO0G22418g hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E ZYRO0D13178g hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E ZYRO0G06886g hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E ZYRO0D05566g hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E ZYRO0G15224g hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E ZYRO0G15224g hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D ZYRO0D15356g hypothetical protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024