+C RNA KO
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Non-coding RNAs - Escherichia coli O18:K1 PMV-1 (ExPEC)
%
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ATransfer RNA
B ECOPMV1_00210 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECOPMV1_04379 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECOPMV1_04211 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECOPMV1_02598 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECOPMV1_02599 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B ECOPMV1_01414 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_01085 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_04130 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_00519 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_02505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_02948 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_02949 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_02950 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B ECOPMV1_02064 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECOPMV1_02084 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECOPMV1_02089 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECOPMV1_02087 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B ECOPMV1_00214 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECOPMV1_04099 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECOPMV1_00224 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B ECOPMV1_02000 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
B ECOPMV1_00676 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECOPMV1_00677 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECOPMV1_00673 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECOPMV1_00674 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B ECOPMV1_02779 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECOPMV1_02821 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECOPMV1_03588 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECOPMV1_04095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B ECOPMV1_02812 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_02001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_04626 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_04627 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_04628 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_03136 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B ECOPMV1_04131 tRNA-His K14226 tRNA-His; tRNA His
B ECOPMV1_00209 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECOPMV1_04210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECOPMV1_04378 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B ECOPMV1_00678 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_04132 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_04826 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_04828 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_04827 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_03483 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_01999 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_04738 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B ECOPMV1_00746 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_00750 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_02606 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_00751 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_00748 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_00752 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B ECOPMV1_01412 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03387 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_00675 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_00679 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03072 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03073 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03480 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03074 tRNA-Met K14230 tRNA-Met; tRNA Met
B ECOPMV1_03240 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B ECOPMV1_04594 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B ECOPMV1_02350 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECOPMV1_03883 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECOPMV1_04133 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B ECOPMV1_01111 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECOPMV1_00916 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECOPMV1_02062 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECOPMV1_01001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECOPMV1_02951 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B ECOPMV1_02811 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECOPMV1_00275 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECOPMV1_02814 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECOPMV1_03584 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B ECOPMV1_04100 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
B ECOPMV1_01362 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECOPMV1_01363 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECOPMV1_02813 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B ECOPMV1_00749 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_02604 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_02605 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_02603 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_00747 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_01760 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_01761 tRNA-Val K14237 tRNA-Val; tRNA Val
B ECOPMV1_04000 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
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ARibosomal RNA
B Prokaryotic rRNA
C ECOPMV1_04094 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_03589 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_04209 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_02780 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_04377 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_00208 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_02822 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C ECOPMV1_00212 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_03586 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_02777 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_02819 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_04381 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_04213 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_04097 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C ECOPMV1_00213 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_02818 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_02776 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_03585 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_04382 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_04214 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_04098 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C ECOPMV1_03583 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
B Eukaryotic rRNA
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ASmall non-coding RNA
B Micro RNA
B Small nuclear RNA
B Small nucleolar RNA
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ALong-non-coding RNA
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AOther RNA
B Signal recognition particle
C ECOPMV1_00442 Bacteria_small_SRP K01983 ffs; SRP RNA
B Ribonuclease P
C ECOPMV1_03433 RNaseP_bact_a K01978 rnpB; M1 RNA
B Antisense regulators
C ECOPMV1_03014 sok K18870 sokB; sRNA antisense regulator of MokB and HokB protein
C ECOPMV1_00016 sok K18871 sokC; sRNA antisense regulator of MokC and HokC protein
C ECOPMV1_03895 sok K18871 sokC; sRNA antisense regulator of MokC and HokC protein
C ECOPMV1_01346 rdlD K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECOPMV1_03871 rdlD K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECOPMV1_03873 rdlD K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECOPMV1_03875 rdlD K18863 rdlA_B_C_D; sRNA antisense regulator of LdrA/B/C/D protein
C ECOPMV1_02232 QUAD K18865 sibB; sRNA antisense regulator of IbsB protein
C ECOPMV1_02231 QUAD K18865 sibB; sRNA antisense regulator of IbsB protein
C ECOPMV1_03184 QUAD K18867 sibC; sRNA antisense regulator of IbsC protein
C ECOPMV1_03368 QUAD K18869 sibE; sRNA antisense regulator of IbsE protein
C ECOPMV1_04801 symR K18524 symR; sRNA antisense regulator of SymE protein
B Unclassified
C ECOPMV1_02850 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
C ECOPMV1_02043 DsrA K18502 dsrA; small regulatory RNA DsrA
C ECOPMV1_00471 sroB K18503 chiX; small regulatory RNA ChiX
C ECOPMV1_03521 ArcZ K18504 arcZ; small regulatory RNA ArcZ
C ECOPMV1_02738 GlmY_tke1 K15841 glmY; small regulatory RNA GlmY
C ECOPMV1_02737 GlmZ_SraJ K15841 glmY; small regulatory RNA GlmY
C ECOPMV1_04136 GlmZ_SraJ K18505 glmZ; small regulatory RNA GlmZ
C ECOPMV1_00074 SgrS K18506 sgrS; small regulatory RNA SgrS
C ECOPMV1_03756 RyhB K18507 ryhB; small regulatory RNA RyhB
C ECOPMV1_00849 RybB K18508 rybB; small regulatory RNA RybB
C ECOPMV1_01566 RydC K18509 rydC; small regulatory RNA RydC
C ECOPMV1_01539 frnS K18510 fnrS; small regulatory RNA FnrS
C ECOPMV1_02944 MicA K18511 micA; small regulatory RNA MicA
C ECOPMV1_01546 MicC K18512 micC; small regulatory RNA MicC
C ECOPMV1_02377 MicF K18513 micF; small regulatory RNA MicF
C ECOPMV1_01667 STnc560 K18514 mgrR; small regulatory RNA MgrR
C ECOPMV1_03049 CsrB K18515 csrB; small regulatory RNA CsrB
C ECOPMV1_04226 CsrC K18516 csrC; small regulatory RNA CsrC
C ECOPMV1_01394 DicF K18517 dicF; small regulatory RNA DicF
C ECOPMV1_01787 RprA K18518 rprA; small regulatory RNA RprA
C ECOPMV1_02053 rseX K18519 rseX; small regulatory RNA RseX
C ECOPMV1_02245 CyaR_RyeE K18520 cyaR; small regulatory RNA CyaR
C ECOPMV1_03066 GcvB K18521 gcvB; small regulatory RNA GcvB
C ECOPMV1_03125 OmrA-B K18522 omrA; small regulatory RNA OmrA
C ECOPMV1_03126 OmrA-B K18523 omrB; small regulatory RNA OmrB
C ECOPMV1_03847 GadY K18525 gadY; small regulatory RNA GadY
C ECOPMV1_04224 Spot_42 K18527 spf; small regulatory RNA Spot 42
C ECOPMV1_04366 OxyS K18528 oxyS; small regulatory RNA OxyS
C ECOPMV1_01532 IS061 K21091 mcaS; small regulatory RNA McaS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 23, 2024