+D GENES KO
#
KEGG Orthology (KO) - Malaciobacter mytili
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:amyt00010]
D AMYT_0863 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AMYT_1460 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AMYT_0479 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AMYT_0298 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AMYT_0296 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AMYT_0297 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AMYT_2303 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AMYT_2414 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AMYT_1802 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AMYT_1801 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_0892 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AMYT_1868 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AMYT_1869 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AMYT_2417 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_1452 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:amyt00020]
D AMYT_2338 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AMYT_1208 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AMYT_1697 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1868 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AMYT_1869 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AMYT_1870 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D AMYT_1867 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D AMYT_2363 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AMYT_2362 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AMYT_2524 frdA2; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2348 frdA1; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2523 frdB2; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2349 frdB1; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2525 frdC2; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_2347 frdC1; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_1369 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AMYT_1367 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AMYT_1805 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AMYT_0622 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AMYT_1164 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D AMYT_1454 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D AMYT_1452 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AMYT_1802 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AMYT_1801 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_0892 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:amyt00030]
D AMYT_0863 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AMYT_1875 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AMYT_2526 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_2274 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_2275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_0710 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_0711 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_2469 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AMYT_0834 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_1396 phnN; ribose 1,5-bisphosphate phosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D AMYT_0587 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AMYT_0479 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AMYT_1460 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:amyt00040]
D AMYT_0864 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AMYT_0862 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AMYT_1875 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AMYT_1647 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:amyt00051]
D AMYT_2596 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_2610 sugar-phosphate nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AMYT_0709 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AMYT_1647 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AMYT_1460 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AMYT_0479 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AMYT_0298 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AMYT_0834 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:amyt00052]
D AMYT_0888 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_2271 UDP-N-acetylglucosamine 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_0702 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_0862 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_2612 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
C 00053 Ascorbate and aldarate metabolism [PATH:amyt00053]
D AMYT_0864 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AMYT_0865 UDP-glucuronic acid epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:amyt00500]
D AMYT_0862 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_0863 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:amyt00520]
D AMYT_0556 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AMYT_0203 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AMYT_2587 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AMYT_2024 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AMYT_2629 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AMYT_2597 N-acetylneuraminate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D AMYT_0869 WxcM-like sugar acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D AMYT_0882 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D AMYT_0910 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D AMYT_0915 NDP-sugar epimerase, putative UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D AMYT_0891 aminotransferase, DegT/DnrJ/EryC1/StrS family K15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]
D AMYT_0901 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_0862 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AMYT_0864 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AMYT_0888 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_2271 UDP-N-acetylglucosamine 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_0702 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_2612 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AMYT_0865 UDP-glucuronic acid epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D AMYT_0863 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AMYT_2610 sugar-phosphate nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AMYT_2596 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AMYT_0895 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
D AMYT_0709 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AMYT_0707 aminotransferase, DegT/DnrJ/EryC1/StrS family K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:amyt00620]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_0892 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AMYT_1868 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AMYT_1869 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AMYT_1802 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AMYT_1801 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_0595 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0597 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0596 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AMYT_2414 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AMYT_0361 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AMYT_0074 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AMYT_0073 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AMYT_0558 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AMYT_2417 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AMYT_0085 FAD/FMN-containing dehydrogenase K18930 dld; D-lactate dehydrogenase
D AMYT_1381 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AMYT_1585 maeA; NAD-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AMYT_1453 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AMYT_1455 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AMYT_1164 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D AMYT_1454 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D AMYT_1805 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AMYT_0622 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D AMYT_1369 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AMYT_1367 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AMYT_2524 frdA2; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2348 frdA1; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2523 frdB2; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2349 frdB1; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2525 frdC2; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_2347 frdC1; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_1452 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_0574 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AMYT_1040 leuAII; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:amyt00630]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_1805 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AMYT_2338 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AMYT_1208 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_0898 enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D AMYT_1371 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D AMYT_1637 gmuE; coenzyme B12-dependent glutamate mutase GlmES, E (epsilon) subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D AMYT_1636 gmuS; coenzyme B12-dependent glutamate mutase GlmES, S (sigma) subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D AMYT_2035 glycolate oxidase, subunit GlcD-related protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AMYT_1423 anaerobic glycerol-3-phosphate dehydrogenase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D AMYT_0188 HAD superfamily hydrolase, probable phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AMYT_2729 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AMYT_1568 phosphoglycolate phosphatase-like HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_0856 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_0041 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_2352 glxK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AMYT_1115 fdhF; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AMYT_1120 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AMYT_1116 fdhGI; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AMYT_1121 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AMYT_1117 fdhC1; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AMYT_1122 fdhC2; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AMYT_1584 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:amyt00640]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_0595 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0597 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0596 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_0046 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_0361 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AMYT_0074 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AMYT_0073 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AMYT_0558 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AMYT_2362 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AMYT_2363 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AMYT_2383 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AMYT_2384 acnD; [Fe-S] cluster-dependent 2-methylisocitrate dehydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D AMYT_2385 prpF; aconitate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D AMYT_1208 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AMYT_2382 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D AMYT_1933 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:amyt00650]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_0898 enoyl-CoA hydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D AMYT_1453 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AMYT_2524 frdA2; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2348 frdA1; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2523 frdB2; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2349 frdB1; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2525 frdC2; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_2347 frdC1; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_0892 por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AMYT_1868 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D AMYT_1869 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D AMYT_1499 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_2359 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_1498 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:amyt00660]
D AMYT_1499 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_2359 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_1498 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AMYT_2362 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AMYT_2363 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AMYT_1637 gmuE; coenzyme B12-dependent glutamate mutase GlmES, E (epsilon) subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D AMYT_1636 gmuS; coenzyme B12-dependent glutamate mutase GlmES, S (sigma) subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D AMYT_1371 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D AMYT_0205 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AMYT_1273 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AMYT_1274 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:amyt00562]
D AMYT_0555 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AMYT_1975 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AMYT_0298 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:amyt00190]
D AMYT_2333 nuoA; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AMYT_2645 nuoA2; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AMYT_2644 nuoB2; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AMYT_2334 nuoB; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AMYT_2643 nuoC2; NADH:quinone oxidoreductase I, chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D AMYT_2642 nuoD2; NADH:quinone oxidoreductase I, chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D AMYT_2335 nuoCD; NADH:quinone oxidoreductase I, fused chains C and D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D AMYT_2336 nuoE; NADH:quinone oxidoreductase I, chain E (thioredoxin-like [2Fe-2S] ferredoxin family) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AMYT_2641 nuoE2; NADH:quinone oxidoreductase I, chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AMYT_2337 nuoF; NADH:quinone oxidoreductase I, NADH-binding chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AMYT_2640 NADH:quinone oxidoreductase I, chain G-like protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AMYT_2639 nuoG2; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AMYT_2339 nuoG; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AMYT_2638 nuoH2; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AMYT_2340 nuoH; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AMYT_2637 nuoI2; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AMYT_2341 nuoI; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AMYT_2636 nuoJ2; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AMYT_2342 nuoJ; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AMYT_2343 nuoK; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AMYT_2635 nuoK2; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AMYT_2634 nuoL2; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AMYT_2344 nuoL; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AMYT_2633 nuoM2; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AMYT_2345 nuoM; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AMYT_2632 nuoN2; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AMYT_2346 nuoN; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AMYT_2524 frdA2; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2348 frdA1; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2523 frdB2; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2349 frdB1; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D AMYT_2525 frdC2; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_2347 frdC1; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D AMYT_0375 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AMYT_0374 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AMYT_0373 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AMYT_0327 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AMYT_2754 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AMYT_0328 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AMYT_0329 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AMYT_0330 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AMYT_0926 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AMYT_0927 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AMYT_0641 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_1640 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_1663 cccA3; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_2054 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AMYT_2052 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AMYT_2053 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AMYT_2055 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AMYT_2051 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AMYT_0382 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AMYT_2056 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AMYT_2057 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AMYT_0726 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AMYT_1036 ppaB; inorganic pyrophosphatase, manganese-dependent K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D AMYT_2128 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AMYT_2129 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:amyt00680]
D AMYT_1115 fdhF; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AMYT_1120 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AMYT_1116 fdhGI; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AMYT_1121 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AMYT_1117 fdhC1; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AMYT_1122 fdhC2; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AMYT_0856 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_0041 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AMYT_1805 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AMYT_0479 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AMYT_1460 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AMYT_0929 molybdopterin-containing oxidoreductase III, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AMYT_1931 molybdopterin-containing oxidoreductase I, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AMYT_0595 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0597 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0596 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D AMYT_2303 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AMYT_1840 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_0354 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_2470 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:amyt00910]
D AMYT_0448 napA; periplasmic nitrate reductase NapAB, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D AMYT_0445 napB; periplasmic nitrate reductase NapAB, small subunit, periplasmic diheme cytochrome c550 protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D AMYT_0438 nrfA; formate-dependent nitrite reductase NrfAH, periplasmic pentaheme cytochrome c subunit K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D AMYT_0439 nrfH; formate-dependent nitrite reductase NrfAH, membrane-bound tetraheme cytochrome c subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D AMYT_0460 nitrite reductase NirS, cytochrome cd1 type K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D AMYT_0461 nitric oxide reductase, large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D AMYT_0462 cytochrome c, putative nitric oxide reductase small subunit K02305 norC; nitric oxide reductase subunit C
D AMYT_2154 nosZ; nitrous oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D AMYT_0843 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AMYT_1045 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AMYT_2413 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_1977 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AMYT_0029 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AMYT_1976 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AMYT_1165 canB1; beta carbonic anhydrase, clade B K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AMYT_2429 canB2; beta carbonic anhydrase, clade B K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AMYT_1170 cah; alpha carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:amyt00920]
D AMYT_2744 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AMYT_2743 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AMYT_0343 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D AMYT_2742 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AMYT_2356 nirA; ferredoxin-nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D AMYT_2745 cysI; sulfite reductase, iron-sulfur subunit K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D AMYT_0207 putative NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D AMYT_0209 putative NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D AMYT_1904 [Fe-S] cluster-containing dehydrogenase component K08358 ttrB; tetrathionate reductase subunit B
D AMYT_1905 anaerobic dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D AMYT_1739 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AMYT_2740 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AMYT_1294 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AMYT_0742 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:amyt00061]
D AMYT_0361 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AMYT_0074 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AMYT_0073 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AMYT_0558 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AMYT_0230 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
D AMYT_0243 acpP2; acyl carrier protein K02078 acpP; acyl carrier protein
D AMYT_0363 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein
D AMYT_2043 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AMYT_0224 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AMYT_2400 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AMYT_0244 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AMYT_0362 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AMYT_0237 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0364 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0241 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_2657 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_0299 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AMYT_1207 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:amyt00071]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_1204 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D AMYT_1207 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AMYT_2500 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:amyt00121]
D AMYT_1854 short-chain dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:amyt00561]
D AMYT_2352 glxK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AMYT_2399 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AMYT_0340 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AMYT_0289 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AMYT_2763 dgkA2; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AMYT_1970 dgkA1; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:amyt00564]
D AMYT_0088 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AMYT_1162 glycerol-3-phosphate dehydrogenase, GlpA family K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AMYT_0340 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AMYT_0289 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AMYT_2763 dgkA2; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AMYT_1970 dgkA1; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AMYT_1882 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AMYT_1161 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AMYT_2500 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D AMYT_0249 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AMYT_1502 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AMYT_2566 psd; phosphatidylserine decarboxylase, proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AMYT_1855 pgsA; phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AMYT_0158 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AMYT_0875 HAD superfamily hydrolase, subfamily IB K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:amyt00565]
D AMYT_1882 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D AMYT_1882 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D AMYT_1882 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:amyt00592]
D AMYT_1882 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D AMYT_2365 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:amyt00230]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_0587 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AMYT_0320 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AMYT_1492 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AMYT_2776 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AMYT_0146 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D AMYT_2098 purL; phosphoribosylformylglycinamidine synthase PurLQS, PurL subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D AMYT_0286 purS; phosphoribosylformylglycinamidine synthase PurLQS, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D AMYT_0287 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AMYT_0150 purM; phosphoribosylformylglycinamide cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AMYT_2243 purE2; 5-aminoimidazole ribonucleotide (AIR) carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AMYT_0285 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AMYT_0024 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AMYT_2097 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AMYT_0920 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AMYT_2703 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AMYT_0937 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AMYT_1268 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AMYT_1586 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AMYT_1285 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AMYT_2396 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AMYT_0681 putative dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AMYT_1918 putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D AMYT_1788 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AMYT_0637 gmk; deoxyguanylate kinase / guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AMYT_0025 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AMYT_0026 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AMYT_1426 nrdD2; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AMYT_1986 dgt; dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AMYT_1871 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
D AMYT_0845 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AMYT_1973 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AMYT_1501 exopolyphosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AMYT_0826 CHASE2 sensor-containing adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AMYT_0851 CHASE2 sensor-containing adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D AMYT_0155 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AMYT_1985 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D AMYT_0532 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AMYT_0997 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AMYT_0957 histidine triad nucleotide-binding protein, Fhit branch K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D AMYT_2744 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AMYT_2743 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:amyt00240]
D AMYT_0887 carbamoylphosphate synthase-like protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AMYT_1297 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AMYT_0157 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AMYT_2410 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AMYT_2492 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AMYT_1851 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AMYT_2721 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AMYT_2016 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AMYT_0847 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AMYT_2396 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AMYT_0306 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AMYT_2357 peptidase, M48 family (DUF45 domain) K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D AMYT_2694 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AMYT_2703 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AMYT_0937 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AMYT_1268 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AMYT_1914 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AMYT_0532 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D AMYT_1426 nrdD2; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AMYT_0025 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AMYT_0026 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AMYT_0075 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AMYT_1736 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AMYT_2380 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AMYT_0392 short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:amyt00250]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_1791 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AMYT_1027 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_1324 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_2520 ansB; asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AMYT_1034 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AMYT_0067 asnBII1; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AMYT_2618 asnBII2; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AMYT_0033 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D AMYT_2522 aspA3; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AMYT_1031 aspA1; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AMYT_1033 aspA2; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AMYT_1408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AMYT_0818 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AMYT_0155 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AMYT_0024 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AMYT_2410 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AMYT_1977 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AMYT_0029 dihydropyrimidine dehydrogenase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AMYT_1976 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AMYT_1045 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AMYT_2413 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AMYT_1514 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_0887 carbamoylphosphate synthase-like protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AMYT_1297 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AMYT_0157 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AMYT_2766 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AMYT_0287 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AMYT_0556 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AMYT_0320 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:amyt00260]
D AMYT_1659 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1473 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1946 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AMYT_0104 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AMYT_0347 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AMYT_1550 type II homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D AMYT_0376 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AMYT_0856 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_0041 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_2352 glxK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AMYT_2303 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AMYT_1840 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_0354 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_2470 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AMYT_0392 short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1502 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AMYT_0383 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AMYT_2181 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AMYT_0921 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AMYT_1383 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AMYT_1657 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AMYT_1656 ectA; diaminobutanoate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D AMYT_1658 ectC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:amyt00270]
D AMYT_1739 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AMYT_2740 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AMYT_0743 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AMYT_2332 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AMYT_0170 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AMYT_1798 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AMYT_0557 metK1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AMYT_2394 metK2; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AMYT_0149 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AMYT_2042 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D AMYT_1586 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AMYT_a0020 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0029 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0049 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_0178 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AMYT_0482 acd; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D AMYT_1659 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1473 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1946 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AMYT_0104 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AMYT_1294 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AMYT_0742 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AMYT_2738 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AMYT_0168 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AMYT_1430 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_1805 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AMYT_1840 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_0354 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:amyt00280]
D AMYT_0168 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:amyt00290]
D AMYT_0383 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AMYT_0205 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AMYT_1273 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AMYT_1274 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AMYT_1499 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_2359 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_1498 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AMYT_2446 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AMYT_2543 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AMYT_0168 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AMYT_0574 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AMYT_1040 leuAII; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:amyt00300]
D AMYT_0104 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AMYT_1659 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1473 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1946 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AMYT_1853 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AMYT_0319 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AMYT_1254 dapD; tetrahydrodipicolinate succinylase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AMYT_2411 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AMYT_1320 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AMYT_0147 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AMYT_0300 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AMYT_1921 PLP-dependent aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AMYT_0626 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AMYT_0956 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:amyt00310]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:amyt00220]
D AMYT_1425 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AMYT_1408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AMYT_0818 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AMYT_2766 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AMYT_0287 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_1045 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AMYT_2413 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_1720 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AMYT_1949 argJ; bifunctional ornithine acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AMYT_0377 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AMYT_0822 argC; N-acetyl-gamma-glutamylphosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AMYT_2411 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:amyt00330]
D AMYT_1738 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D AMYT_1042 speB; arginase/agmatinase/formiminoglutamate hydrolase, arginase family K01480 speB; agmatinase [EC:3.5.3.11]
D AMYT_0149 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AMYT_2130 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D AMYT_0685 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AMYT_1514 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AMYT_2063 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AMYT_0043 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:amyt00340]
D AMYT_0398 hisG(S); ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AMYT_0165 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D AMYT_0579 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AMYT_0907 wbuY; glutamine amidotransferase WbuY K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AMYT_0581 hisH; imidazole glycerol phosphate synthase HisFH, HisH subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AMYT_0052 hisF; imidazole glycerol phosphate synthase HisFH, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AMYT_0908 wbuZ; glycosyl amidation-associated protein WbuZ K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AMYT_1725 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AMYT_2308 hisJ; histidinol-phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D AMYT_0485 hisD; histidinal dehydrogenase / histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AMYT_0513 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AMYT_0238 aromatic amino acid lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
C 00350 Tyrosine metabolism [PATH:amyt00350]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:amyt00360]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AMYT_0963 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AMYT_0699 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00380 Tryptophan metabolism [PATH:amyt00380]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:amyt00400]
D AMYT_2468 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AMYT_1309 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AMYT_0592 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AMYT_1587 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AMYT_0484 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AMYT_0357 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AMYT_2072 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AMYT_0854 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AMYT_2325 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AMYT_1410 trpD; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpD subunit K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AMYT_1873 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AMYT_1863 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AMYT_2181 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AMYT_0921 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AMYT_1383 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AMYT_0302 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AMYT_1469 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:amyt00410]
D AMYT_0545 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AMYT_2475 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:amyt00430]
D AMYT_1045 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D AMYT_0596 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AMYT_0595 ackA1; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AMYT_0597 ackA2; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:amyt00440]
D AMYT_1391 phnI; carbon-phosphorus lyase core complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D AMYT_1390 phnH; carbon-phosphorus lyase core complex subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D AMYT_1394 phnL; methylphosphonate degradation complex subunit PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D AMYT_1395 phnM; RPnTP hydrolase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D AMYT_1392 phnJ; carbon-phosphorus lyase core complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D AMYT_1397 phnP; 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:amyt00450]
D AMYT_0742 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AMYT_0743 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AMYT_2332 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AMYT_0170 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AMYT_1798 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AMYT_0807 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AMYT_0012 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AMYT_0139 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AMYT_0318 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AMYT_1146 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AMYT_2744 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AMYT_2743 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AMYT_1105 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AMYT_1101 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AMYT_1458 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:amyt00460]
D AMYT_2520 ansB; asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AMYT_1034 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AMYT_0856 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_0041 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:amyt00470]
D AMYT_1000 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_0697 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_0954 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AMYT_2766 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AMYT_0287 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D AMYT_2390 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AMYT_2301 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AMYT_1027 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_1324 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_0147 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AMYT_0300 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AMYT_0963 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AMYT_0699 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:amyt00480]
D AMYT_1072 lactam utilization protein, LamB/YcsF family K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AMYT_1430 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AMYT_0923 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AMYT_1375 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AMYT_1697 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AMYT_1749 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AMYT_0149 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:amyt00540]
D AMYT_2658 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AMYT_0345 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AMYT_1497 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AMYT_0823 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AMYT_2656 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AMYT_1618 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AMYT_0055 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AMYT_2019 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AMYT_1724 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AMYT_1415 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AMYT_2238 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AMYT_1971 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AMYT_2762 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AMYT_2601 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AMYT_1953 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AMYT_0919 waaE; D,D-heptose 1-phosphate adenosyltransferase / D,D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AMYT_0917 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AMYT_0918 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AMYT_0706 GHMP kinase family protein K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D AMYT_0705 sugar-phosphate nucleotidyltransferase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D AMYT_1972 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AMYT_1954 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AMYT_1653 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D AMYT_1967 putative membrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:amyt00541]
D AMYT_0862 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AMYT_0888 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_2271 UDP-N-acetylglucosamine 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_0702 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AMYT_2612 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D AMYT_0864 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AMYT_0865 UDP-glucuronic acid epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D AMYT_0866 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AMYT_0867 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_2602 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_0707 aminotransferase, DegT/DnrJ/EryC1/StrS family K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D AMYT_2596 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D AMYT_0709 GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D AMYT_0895 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
D AMYT_2587 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AMYT_0882 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D AMYT_0910 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D AMYT_0911 polysaccharide biosynthesis protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D AMYT_0883 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D AMYT_0912 UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D AMYT_0915 NDP-sugar epimerase, putative UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D AMYT_0869 WxcM-like sugar acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:amyt00550]
D AMYT_2024 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AMYT_2629 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AMYT_2459 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AMYT_2301 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AMYT_0626 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AMYT_0954 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AMYT_0956 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AMYT_2585 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AMYT_2313 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AMYT_2302 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AMYT_2314 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AMYT_2306 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AMYT_1717 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AMYT_2316 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:amyt00552]
D AMYT_2313 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:amyt00543]
D AMYT_2689 membrane-bound O-acyl transferase, MBOAT family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D AMYT_0550 membrane-bound O-acyl transferase, MBOAT family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D AMYT_2267 membrane-bound O-acyl transferase, MBOAT family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D AMYT_2279 membrane-bound O-acyl transferase, MBOAT family K19294 algI; alginate O-acetyltransferase complex protein AlgI
D AMYT_1739 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:amyt00730]
D AMYT_0162 thiC; HMP-P synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AMYT_2112 thiD; hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AMYT_0813 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1126 NifS/IscS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1614 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AMYT_0304 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AMYT_0259 thiG; 1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AMYT_0559 thiE; thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AMYT_0380 thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AMYT_0949 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AMYT_0997 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:amyt00740]
D AMYT_1435 ribA2; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_1084 ribA1; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_1450 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AMYT_0352 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AMYT_2018 ribH; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AMYT_2664 ribE; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, alpha subunit) K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AMYT_2030 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AMYT_0065 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D AMYT_1734 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:amyt00750]
D AMYT_1748 pdxH; pyridoxine 5'-phosphate oxidase / pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AMYT_0849 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AMYT_0850 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AMYT_0376 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:amyt00760]
D AMYT_1791 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AMYT_0341 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AMYT_0342 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AMYT_2703 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AMYT_0295 nadD; nicotinate-mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AMYT_1620 nadE; NAD synthetase, NH3-dependent K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AMYT_0621 pncC; NMN amidohydrolase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AMYT_2249 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:amyt00770]
D AMYT_1499 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_2359 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AMYT_1498 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AMYT_2446 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AMYT_2543 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AMYT_2182 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AMYT_0307 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AMYT_2475 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AMYT_0397 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D AMYT_2586 dfp; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AMYT_1735 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AMYT_0148 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AMYT_2473 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AMYT_1289 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D AMYT_0168 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AMYT_0545 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:amyt00780]
D AMYT_2717 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D AMYT_0244 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AMYT_0362 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AMYT_0237 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0364 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0241 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_2657 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_0299 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AMYT_2427 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AMYT_2095 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AMYT_2192 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AMYT_2626 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D AMYT_2060 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:amyt00785]
D AMYT_1803 lplA; lipoate--protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AMYT_1804 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_1802 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AMYT_1801 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:amyt00790]
D AMYT_2103 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AMYT_2240 Nif3-like dinuclear metal center protein, putative GTP cyclohydrolase K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D AMYT_0339 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AMYT_0590 folK; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AMYT_1470 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AMYT_2379 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AMYT_0501 folC; bifunctional folypolyglutamate synthetase / dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AMYT_1435 ribA2; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_1084 ribA1; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_1450 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AMYT_2409 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AMYT_2406 branched-chain amino acid aminotransferase, possible 4-amino-4-deoxychorismate lyase PabC K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AMYT_0367 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AMYT_0366 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AMYT_0368 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AMYT_0013 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AMYT_0468 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AMYT_2708 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AMYT_2310 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AMYT_1314 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AMYT_1127 moeA2; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AMYT_1527 moeA3; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AMYT_0369 moeA1; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AMYT_0206 mobA; molybdenum cofactor guanylyltransferase protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:amyt00670]
D AMYT_2379 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AMYT_0836 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AMYT_0856 glyA1; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_0041 glyA2; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AMYT_2776 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AMYT_2097 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AMYT_0889 formyltransferase domain-containing protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AMYT_2062 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AMYT_0170 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AMYT_2380 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AMYT_1584 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AMYT_1829 fau; 5-formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:amyt00860]
D AMYT_0048 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1465 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_0488 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AMYT_1267 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AMYT_1434 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AMYT_2387 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AMYT_1493 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AMYT_1944 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AMYT_1424 hemN1; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D AMYT_0058 UPF0093 domain-containing membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D AMYT_0643 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AMYT_1249 cysG2; uroporphyrinogen-III (C7)-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AMYT_0454 cysG1; uroporphyrinogen-III (C7)-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AMYT_0451 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D AMYT_0450 putative siroheme decarboxylase K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D AMYT_0459 cytochrome d1 heme domain protein, putative NirN K24867 nirN; dihydro-heme d1 dehydrogenase
D AMYT_1552 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AMYT_1480 sirohydrochlorin ferrochelatase family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AMYT_1551 cbiL; cobalt-sirohydrochlorin (C20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D AMYT_1561 cbiH; cobalt-precorrin-3 (C17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D AMYT_1559 cbiF; cobalt precorrin-4 (C11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D AMYT_1560 cbiG; cobalt-precorrin 5A hydrolase K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D AMYT_1557 cbiD; cobalt-precorrin-6A synthase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D AMYT_1558 cbiET; cobalt-precorrin-6B (C15)-methyltransferase / cobalt-precorrin-7 (C5)-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D AMYT_1555 cbiC; cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D AMYT_1554 cbiA; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D AMYT_1176 cobaltochelatase / magnesium chelatase family protein K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D AMYT_2549 cbiP; adenosyl-cobyrate synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D AMYT_2548 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AMYT_2554 cobU; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D AMYT_2553 cobS; adenosylcobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D AMYT_2552 cobD; L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D AMYT_1747 heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:amyt00130]
D AMYT_0112 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AMYT_2331 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D AMYT_1734 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AMYT_0536 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AMYT_2312 mqnA2; 6-amino-6-deoxyfutalosine synthase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D AMYT_2431 menaquinone biosynthesis protein, SCO4494 family K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D AMYT_0593 metallo-dependent hydrolase, subgroup D K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D AMYT_2042 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D AMYT_1467 mqnC; dehypoxanthinylfutalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D AMYT_2630 mqnD; 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:amyt00900]
D AMYT_0304 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AMYT_0250 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AMYT_0160 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D AMYT_0325 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AMYT_0860 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AMYT_0356 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_1734 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AMYT_0547 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AMYT_0487 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AMYT_2585 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:amyt00907]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AMYT_2526 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_2274 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_2275 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_0710 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AMYT_0711 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:amyt00523]
D AMYT_0866 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AMYT_0867 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_2602 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures [PATH:amyt01054]
D AMYT_1027 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_1324 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D AMYT_0867 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_2602 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:amyt00332]
D AMYT_2063 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AMYT_0043 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:amyt00261]
D AMYT_2744 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AMYT_2743 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AMYT_1659 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1473 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AMYT_1946 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AMYT_1853 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AMYT_0319 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:amyt00521]
D AMYT_0034 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AMYT_0555 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AMYT_1975 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AMYT_0866 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AMYT_0867 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_2602 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:amyt00525]
D AMYT_0866 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AMYT_0867 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AMYT_2602 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:amyt00401]
D AMYT_1469 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AMYT_0854 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AMYT_2325 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AMYT_2043 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AMYT_0237 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0364 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0299 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AMYT_0230 acpP1; acyl carrier protein K02078 acpP; acyl carrier protein
D AMYT_0243 acpP2; acyl carrier protein K02078 acpP; acyl carrier protein
D AMYT_0363 acpP3; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:amyt00999]
D AMYT_0557 metK1; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AMYT_2394 metK2; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AMYT_1587 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:amyt00362]
D AMYT_1988 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AMYT_2377 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AMYT_1453 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D AMYT_1734 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D AMYT_1988 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AMYT_2377 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:amyt00633]
D AMYT_1210 [Ni-Fe] hydrogenase, small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D AMYT_0185 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D AMYT_0184 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D AMYT_0186 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:amyt00930]
D AMYT_1205 fadJ; 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D AMYT_1988 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AMYT_2377 4-oxalocrotonate tautomerase family enzyme K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:amyt03020]
D AMYT_2287 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AMYT_2286 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AMYT_1282 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AMYT_0846 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:amyt03010]
D AMYT_0355 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AMYT_0633 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AMYT_0973 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AMYT_1281 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AMYT_0984 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AMYT_2440 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AMYT_2251 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AMYT_0981 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AMYT_0190 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AMYT_0966 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AMYT_1280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AMYT_2252 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AMYT_1279 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AMYT_0980 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AMYT_0470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AMYT_2235 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AMYT_0976 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AMYT_2438 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AMYT_0971 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AMYT_0202 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AMYT_2709 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AMYT_2290 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AMYT_0970 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AMYT_0967 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AMYT_0968 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AMYT_0979 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AMYT_0982 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AMYT_2288 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AMYT_1732 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AMYT_2289 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AMYT_2291 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AMYT_0191 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AMYT_0977 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AMYT_0985 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AMYT_0974 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AMYT_1283 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AMYT_0983 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AMYT_0385 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AMYT_0213 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AMYT_2066 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AMYT_0972 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AMYT_0969 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AMYT_0978 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AMYT_0838 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AMYT_2065 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AMYT_1951 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AMYT_0975 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AMYT_0109 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AMYT_2398 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AMYT_2295 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AMYT_2083 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AMYT_0214 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AMYT_1278 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AMYT_0171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2322 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2714 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0174 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_0272 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2319 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2711 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_0175 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2318 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_0273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2710 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:amyt00970]
D AMYT_2039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0271 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0173 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2712 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0268 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_0114 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_0265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_1940 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_1942 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_1941 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_0617 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_0613 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_0609 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_2539 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AMYT_2008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_1449 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_1444 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_0615 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0619 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0608 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0611 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_1299 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_2013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_2297 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_0267 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_2012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_0264 tRNA-His K14226 tRNA-His; tRNA His
D AMYT_2005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2321 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_0172 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2713 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_0270 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_1179 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_1649 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_2542 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0266 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_0612 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_0616 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_2010 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1446 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_2014 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_2011 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1448 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AMYT_2300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AMYT_0263 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AMYT_2541 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AMYT_2015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AMYT_1445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2299 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2294 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AMYT_2298 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AMYT_1181 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AMYT_0618 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_0610 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_0614 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_1102 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AMYT_0048 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1465 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1284 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AMYT_0087 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AMYT_2466 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AMYT_0313 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AMYT_0993 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AMYT_2241 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AMYT_1440 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AMYT_0216 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AMYT_0436 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AMYT_1101 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AMYT_2437 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AMYT_1458 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AMYT_0889 formyltransferase domain-containing protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AMYT_2062 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AMYT_0669 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AMYT_0499 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AMYT_0623 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AMYT_0857 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AMYT_0293 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AMYT_0489 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AMYT_1737 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_0154 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_0359 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AMYT_0358 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AMYT_0844 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AMYT_0403 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:amyt03060]
D AMYT_0986 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AMYT_2293 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AMYT_2718 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AMYT_0494 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AMYT_0495 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D AMYT_0493 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AMYT_2080 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AMYT_1693 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AMYT_2236 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AMYT_0019 srpB; bacterial signal recognition particle RNA (4.5S RNA) K01983 ffs; SRP RNA
D AMYT_1831 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AMYT_0292 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AMYT_1625 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D AMYT_1626 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
D AMYT_0835 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AMYT_0204 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:amyt04122]
D AMYT_0813 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1126 NifS/IscS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_0589 mnmA; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AMYT_2310 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AMYT_0468 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AMYT_2311 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D AMYT_1296 thiF; ThiS adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AMYT_2186 FeThRed_B, RHOD domain-containing protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D AMYT_2708 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AMYT_1314 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AMYT_1614 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AMYT_2420 thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:amyt03018]
D AMYT_1474 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AMYT_1488 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AMYT_2443 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AMYT_0072 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AMYT_2392 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D AMYT_1828 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AMYT_0054 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AMYT_2571 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D AMYT_0549 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AMYT_2128 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AMYT_2129 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:amyt03030]
D AMYT_0598 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_0602 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1872 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1993 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_2702 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AMYT_2389 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AMYT_1471 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AMYT_2441 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AMYT_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_a0010 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_0861 dnaB; replicative DNA helicase (homing endonuclease-associated domain) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AMYT_a0162 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AMYT_2068 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2070 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AMYT_2088 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:amyt03410]
D AMYT_0829 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AMYT_2728 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AMYT_0991 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AMYT_0127 exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_1018 xth1; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_2667 xth2; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_2652 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AMYT_2695 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:amyt03420]
D AMYT_0512 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AMYT_1742 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AMYT_0825 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AMYT_1001 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AMYT_0323 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_0667 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:amyt03430]
D AMYT_0578 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS
D AMYT_1316 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D AMYT_0323 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_0667 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_0537 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AMYT_1295 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AMYT_1628 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AMYT_2695 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2702 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AMYT_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_a0010 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_2389 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AMYT_2441 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AMYT_1471 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AMYT_0598 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_0602 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1872 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1993 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AMYT_0118 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_0792 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:amyt03440]
D AMYT_2695 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_1399 recR; recombination protein K06187 recR; recombination protein RecR
D AMYT_2621 recA; recombinase K03553 recA; recombination protein RecA
D AMYT_0953 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AMYT_2183 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AMYT_2777 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AMYT_0379 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AMYT_1710 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AMYT_2702 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AMYT_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_a0010 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_2389 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AMYT_2441 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AMYT_1471 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AMYT_0598 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_0602 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1872 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1993 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1253 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:amyt02010]
D AMYT_1128 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D AMYT_1129 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein
D AMYT_1130 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D AMYT_1131 molybdate/sulfate/tungstate ABC transporter, periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D AMYT_1133 molybdate/sulfate/tungstate ABC transporter, permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D AMYT_1132 molybdate/sulfate/tungstate ABC transporter, ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D AMYT_1355 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AMYT_2444 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AMYT_1353 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D AMYT_1352 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AMYT_2328 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AMYT_2329 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D AMYT_2330 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AMYT_1196 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AMYT_0279 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AMYT_0281 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AMYT_0280 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AMYT_1308 ABC transporter, periplasmic substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AMYT_0958 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_0200 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_0959 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D AMYT_0198 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D AMYT_0960 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D AMYT_0197 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein
D AMYT_0961 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AMYT_0196 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AMYT_1387 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AMYT_1388 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D AMYT_1386 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AMYT_0407 amino acid ABC transporter, periplasmic amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AMYT_0406 amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D AMYT_1519 livK2; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1242 livK1; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_2087 periplasmic ligand-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1518 livH2; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1243 livH1; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1517 livM2; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1244 livM1; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1516 livG2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1245 livG1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1515 livF2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1246 livF1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1754 metQ; DL-methionine ABC transporter MetINQ, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AMYT_1755 metI; DL-methionine ABC transporter MetINQ, permease protein K02072 metI; D-methionine transport system permease protein
D AMYT_1756 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AMYT_0720 nikA; nickel ABC transporter, periplasmic substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D AMYT_1236 nickel ABC transporter, periplasmic substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D AMYT_0719 nikB; nickel ABC transporter, permease protein K15585 nikB; nickel transport system permease protein
D AMYT_1237 nickel ABC transporter, permease protein K15585 nikB; nickel transport system permease protein
D AMYT_0718 nikC; nickel ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D AMYT_1238 nickel ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D AMYT_0717 nikD; nickel ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_1239 nickel ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_0716 nikE; nickel ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_1240 nickel ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_0994 metal-binding protein, ZntC/ZnuA family K09815 znuA; zinc transport system substrate-binding protein
D AMYT_0739 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AMYT_0649 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein
D AMYT_0648 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AMYT_2261 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D AMYT_2259 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D AMYT_2258 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D AMYT_1859 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D AMYT_2262 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D AMYT_2260 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein
D AMYT_1860 putative membrane protein K16915 cbiL; nickel transport protein
D AMYT_2753 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AMYT_2583 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein
D AMYT_0840 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein
D AMYT_1412 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AMYT_1258 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AMYT_1259 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AMYT_0412 ABC transporter, ATP-binding/permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D AMYT_0411 ABC transporter, ATP-binding/permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D AMYT_1850 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AMYT_1885 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AMYT_1677 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AMYT_2532 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:amyt03070]
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1884 type I secretion system membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D AMYT_1885 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AMYT_2027 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D AMYT_2104 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F
D AMYT_0916 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D AMYT_2105 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AMYT_0494 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AMYT_0495 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D AMYT_2293 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AMYT_2718 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AMYT_0986 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AMYT_0493 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AMYT_2080 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AMYT_1693 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AMYT_1831 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AMYT_2236 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AMYT_0292 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AMYT_1625 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D AMYT_1626 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:amyt02020]
D AMYT_0958 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_0200 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_2544 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D AMYT_0093 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system
D AMYT_0092 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein
D AMYT_1661 putative flagellar protein K02406 fliC; flagellin
D AMYT_2188 fla1; flagellin K02406 fliC; flagellin
D AMYT_2591 fla2; flagellin K02406 fliC; flagellin
D AMYT_2593 fla3; flagellin K02406 fliC; flagellin
D AMYT_2594 fla4; flagellin K02406 fliC; flagellin
D AMYT_2214 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D AMYT_0181 tripartite tricarboxylate transport protein TctABC, permease subunit TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AMYT_0182 tripartite tricarboxylate transport protein TctABC, membrane-spanning subunit TctB K07794 tctB; putative tricarboxylic transport membrane protein
D AMYT_0183 tripartite tricarboxylate transport protein TctABC, extracytoplasmic tricarboxylate-binding receptor TctC K07795 tctC; putative tricarboxylic transport membrane protein
D AMYT_0569 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AMYT_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D AMYT_1235 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D AMYT_0180 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1068 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1929 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1233 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_0677 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AMYT_2519 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D AMYT_2304 signal transduction response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D AMYT_1370 putative CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AMYT_1373 putative (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AMYT_2499 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AMYT_2493 nitrogen regulatory protein P-II, GlnB/GlnK K04751 glnB; nitrogen regulatory protein P-II 1
D AMYT_2495 nitrogen regulatory protein P-II, GlnB/GlnK K04751 glnB; nitrogen regulatory protein P-II 1
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_1433 PAS sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1028 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1110 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1910 signal transduction sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1927 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1981 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_0474 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_2193 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1210 [Ni-Fe] hydrogenase, small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D AMYT_1214 hyaC; [Ni-Fe] hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D AMYT_1219 hydC; [Ni-Fe] hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D AMYT_1485 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AMYT_0381 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0952 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0694 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0724 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0725 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1570 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1573 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2423 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2425 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2426 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1685 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0947 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1011 Cache sensor-containing signal transduction histidine kinase K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1067 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1085 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2747 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1225 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2031 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2120 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2140 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1401 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2246 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1569 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0538 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0540 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AMYT_1486 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AMYT_2229 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1487 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1702 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1483 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AMYT_0819 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AMYT_1978 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP
D AMYT_1979 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AMYT_1980 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AMYT_1071 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AMYT_1904 [Fe-S] cluster-containing dehydrogenase component K08358 ttrB; tetrathionate reductase subunit B
D AMYT_2766 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AMYT_0375 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AMYT_0374 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AMYT_0373 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AMYT_0641 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_1640 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_1663 cccA3; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D AMYT_0327 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AMYT_2754 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AMYT_0328 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AMYT_0329 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AMYT_0330 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AMYT_0926 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AMYT_0927 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0032 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AMYT_0375 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:amyt02024]
D AMYT_0178 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AMYT_0854 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AMYT_2325 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AMYT_2468 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AMYT_1519 livK2; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1242 livK1; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_2087 periplasmic ligand-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1518 livH2; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1243 livH1; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1517 livM2; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1244 livM1; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1516 livG2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1245 livG1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1515 livF2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1246 livF1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1207 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AMYT_1435 ribA2; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_1084 ribA1; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AMYT_0352 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AMYT_0189 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AMYT_1928 putative periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AMYT_2474 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AMYT_1825 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AMYT_2305 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AMYT_2080 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AMYT_2293 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AMYT_2718 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AMYT_0986 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AMYT_0493 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AMYT_1693 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AMYT_1831 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AMYT_2236 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AMYT_2304 signal transduction response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:amyt02030]
D AMYT_0381 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0952 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0694 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0724 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0725 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1570 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1573 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2423 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2425 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2426 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1685 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0947 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1011 Cache sensor-containing signal transduction histidine kinase K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1067 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1085 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2747 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1225 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2031 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2120 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2140 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1401 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2246 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1569 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0538 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1308 ABC transporter, periplasmic substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AMYT_1486 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AMYT_0540 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AMYT_2229 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1487 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1702 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1703 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC
D AMYT_1483 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AMYT_0819 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AMYT_1484 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AMYT_1485 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AMYT_2224 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D AMYT_2491 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D AMYT_2215 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D AMYT_2222 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D AMYT_2214 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D AMYT_2213 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:amyt02040]
D AMYT_2206 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AMYT_2225 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AMYT_2224 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D AMYT_2223 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D AMYT_2200 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AMYT_2485 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL
D AMYT_2491 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D AMYT_2215 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D AMYT_2222 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D AMYT_1718 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D AMYT_2488 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D AMYT_2203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D AMYT_2198 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D AMYT_2202 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D AMYT_2226 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AMYT_2205 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AMYT_2221 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AMYT_2219 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D AMYT_2220 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D AMYT_2227 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D AMYT_2230 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D AMYT_2483 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AMYT_2490 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AMYT_2212 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AMYT_2482 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1
D AMYT_2199 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D AMYT_1661 putative flagellar protein K02406 fliC; flagellin
D AMYT_2188 fla1; flagellin K02406 fliC; flagellin
D AMYT_2591 fla2; flagellin K02406 fliC; flagellin
D AMYT_2593 fla3; flagellin K02406 fliC; flagellin
D AMYT_2594 fla4; flagellin K02406 fliC; flagellin
D AMYT_2481 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D AMYT_2480 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AMYT_2214 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D AMYT_2213 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D AMYT_1272 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D AMYT_0170 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:amyt01501]
D AMYT_1235 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D AMYT_0942 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AMYT_0410 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AMYT_1304 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_0796 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_1305 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_2306 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AMYT_1717 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AMYT_2316 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:amyt01502]
D AMYT_0180 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1068 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1929 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1233 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_0677 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_0954 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AMYT_1000 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_0697 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_0956 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AMYT_2302 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AMYT_2314 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:amyt01503]
D AMYT_2762 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AMYT_0842 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AMYT_0760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AMYT_2544 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D AMYT_1304 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_0796 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_1305 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_2658 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:amyt01000]
C 01001 Protein kinases [BR:amyt01001]
D AMYT_a0177 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AMYT_0569 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AMYT_1665 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0525 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_2546 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0096 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0098 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1902 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_2773 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0476 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1834 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1579 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_2519 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D AMYT_1433 PAS sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1028 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1110 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1910 signal transduction sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1927 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1981 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_0474 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_2193 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_0932 multi-sensor domain-containing two-component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_0141 Cache sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2084 Cache sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2156 PAS sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2536 Cache sensor-containing two-component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_1486 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AMYT_1094 two-component system sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D AMYT_1996 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_0671 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_0676 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_1187 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:amyt01009]
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D AMYT_2470 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:amyt01002]
D AMYT_0204 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AMYT_2584 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AMYT_1215 hyaD; [Ni-Fe] hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D AMYT_1220 hydD; [Ni-Fe] hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D AMYT_1788 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AMYT_0311 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D AMYT_0320 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AMYT_1977 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AMYT_0556 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AMYT_0067 asnBII1; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AMYT_2618 asnBII2; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AMYT_1150 GATase1_PfpI_1 domain-containing protein K05520 yhbO; deglycase [EC:3.5.1.124]
D AMYT_2699 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D AMYT_1477 zinc-dependent peptidase, M3 family K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AMYT_0666 peptidase, M15 family K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AMYT_0923 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AMYT_1320 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AMYT_1375 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AMYT_0987 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AMYT_0591 pepQ; Xaa-Pro dipeptidase, M24 metallopeptidase family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AMYT_0565 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AMYT_1312 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AMYT_2075 htpX; heat shock protein HtpX, M48 family peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AMYT_1856 RseP-like zinc metalloprotease, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AMYT_2544 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D AMYT_2123 clpP; serine protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AMYT_0687 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AMYT_0655 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AMYT_0794 peptidase S24 LexA-like protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AMYT_0835 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AMYT_0284 ctpA; carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AMYT_0594 sppA; signal peptide peptidase protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D AMYT_1731 hslV; heat shock protein HslVU, ATP-dependent protease subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AMYT_2245 collagenase-like peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:amyt01003]
D AMYT_2306 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:amyt01005]
D AMYT_2658 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AMYT_2656 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AMYT_0345 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AMYT_1497 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AMYT_0823 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AMYT_1618 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AMYT_1971 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AMYT_2238 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AMYT_2762 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AMYT_2019 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AMYT_1415 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AMYT_1724 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AMYT_0055 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AMYT_1972 waaC; heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AMYT_1954 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AMYT_1967 putative membrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D AMYT_1653 phosphoethanolamine transferase K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-]
D AMYT_2601 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AMYT_1953 gmhA; sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AMYT_0917 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AMYT_0919 waaE; D,D-heptose 1-phosphate adenosyltransferase / D,D-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AMYT_0918 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:amyt01011]
D AMYT_2024 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AMYT_2629 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AMYT_2459 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AMYT_2301 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AMYT_0626 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AMYT_0954 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AMYT_1000 alr2; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_0697 alr1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AMYT_2390 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AMYT_2302 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AMYT_2314 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AMYT_2313 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AMYT_1849 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D AMYT_2306 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AMYT_1717 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AMYT_2316 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AMYT_0311 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D AMYT_0666 peptidase, M15 family K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AMYT_1463 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AMYT_2569 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AMYT_0632 lytic murein transglycosylase C (DUF3393 domain) K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D AMYT_1727 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AMYT_1696 YceG-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AMYT_1726 rlpA; septal ring lytic transglycosylase K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AMYT_0842 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AMYT_0760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:amyt01004]
D AMYT_2043 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AMYT_0224 3-oxoacyl-[acp] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AMYT_2400 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AMYT_0244 beta-ketoacyl-[acp] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AMYT_0362 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AMYT_0237 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0364 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AMYT_0241 hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_2657 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AMYT_0299 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AMYT_2365 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AMYT_1372 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AMYT_1207 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AMYT_2399 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AMYT_0340 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AMYT_0289 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:amyt01008]
D AMYT_1027 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
D AMYT_1324 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:amyt01006]
D AMYT_0547 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D AMYT_0487 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AMYT_2585 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AMYT_0110 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AMYT_0112 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:amyt01007]
D AMYT_0048 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1465 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_0844 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AMYT_0403 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AMYT_2437 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AMYT_0293 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AMYT_1458 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AMYT_0623 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AMYT_0669 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AMYT_0499 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AMYT_0857 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AMYT_0993 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AMYT_1737 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_0154 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_2241 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AMYT_1440 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AMYT_0436 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AMYT_0489 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AMYT_0216 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AMYT_0313 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AMYT_0359 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AMYT_0358 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AMYT_1794 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AMYT_0105 aspartate aminotransferase, class I and II aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D AMYT_0303 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AMYT_2427 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AMYT_2332 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AMYT_2411 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AMYT_1657 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AMYT_2095 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AMYT_1267 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AMYT_0168 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AMYT_0895 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:amyt00194]
D AMYT_2051 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AMYT_2052 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AMYT_2053 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AMYT_2054 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AMYT_2055 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AMYT_2056 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AMYT_2057 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AMYT_0726 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AMYT_0382 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:amyt03000]
D AMYT_a0020 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0029 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0049 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_0006 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D AMYT_1816 transcriptional regulator, AraC family K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D AMYT_1922 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator
D AMYT_1163 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator
D AMYT_0432 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator
D AMYT_0040 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AMYT_0322 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D AMYT_1056 transcriptional regulator, LysR family K21959 ftsR; LysR family transcriptional regulator, cell division regulator
D AMYT_1385 phnF; phosphonate metabolism transcriptional regulator PhnF K03710 K03710; GntR family transcriptional regulator
D AMYT_1329 transcriptional regulator, MocR family (aminotransferase domain) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AMYT_1019 transcriptional regulator, TetR/AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AMYT_2378 transcriptional regulator, TetR/AcrR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AMYT_1706 hspR; heat shock transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D AMYT_2102 ectR; transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D AMYT_2176 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AMYT_2165 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AMYT_1844 perR; peroxide stress transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D AMYT_1149 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D AMYT_1374 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D AMYT_0453 putative nitrosative stress-response regulator NssR, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D AMYT_2143 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D AMYT_0471 transcriptional regulator, IscR/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AMYT_2739 iscR; transcriptional regulator, IscR/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D AMYT_2510 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AMYT_1898 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D AMYT_1925 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D AMYT_2060 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AMYT_1356 modE; transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D AMYT_1125 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D AMYT_2516 PAS domain-containing transcriptional regulator, YheO family K21829 dauR; D-arginine utilization repressor
D AMYT_1514 putA; proline dehydrogenase / 1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AMYT_2679 metal/formaldehyde-sensitive transcriptional repressor, RcnR/FrmR family K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D AMYT_2058 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AMYT_a0141 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AMYT_2573 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D AMYT_0561 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_2735 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_0276 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:amyt03021]
D AMYT_1282 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AMYT_2287 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AMYT_2286 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AMYT_0846 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AMYT_1272 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D AMYT_2436 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D AMYT_2017 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D AMYT_2292 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D AMYT_0561 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_2735 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_0276 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_0821 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AMYT_1763 greB; transcription elongation factor GreB K03624 greA; transcription elongation factor GreA
D AMYT_2392 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D AMYT_2730 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:amyt03019]
D AMYT_2071 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AMYT_0054 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D AMYT_1828 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D AMYT_2443 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AMYT_0072 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AMYT_1488 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AMYT_2392 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D AMYT_2571 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D AMYT_0549 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AMYT_2128 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AMYT_2129 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D AMYT_1474 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AMYT_1166 ribonuclease activity regulator, RraA family K02553 rraA; regulator of ribonuclease activity A
D AMYT_1635 ribonuclease activity regulator, RraA family K02553 rraA; regulator of ribonuclease activity A
D AMYT_1775 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:amyt03011]
D AMYT_0355 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AMYT_0633 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AMYT_0973 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AMYT_1281 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AMYT_0984 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AMYT_2440 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AMYT_2251 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AMYT_0981 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AMYT_0190 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AMYT_0966 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AMYT_1280 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AMYT_2252 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AMYT_1279 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AMYT_0980 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AMYT_0470 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AMYT_2235 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AMYT_0976 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AMYT_2438 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AMYT_0971 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AMYT_0202 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AMYT_2709 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AMYT_2290 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AMYT_0970 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AMYT_0967 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AMYT_0968 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AMYT_0979 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AMYT_0982 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AMYT_1732 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AMYT_2289 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AMYT_2291 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AMYT_2288 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AMYT_0191 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AMYT_0977 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AMYT_0985 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AMYT_0974 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AMYT_1283 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AMYT_0983 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AMYT_0385 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AMYT_0213 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AMYT_2066 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AMYT_0972 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AMYT_0969 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AMYT_0978 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AMYT_2065 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AMYT_1951 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AMYT_0975 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AMYT_0109 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AMYT_2398 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AMYT_2295 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AMYT_2083 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AMYT_0214 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AMYT_1278 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AMYT_0838 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AMYT_0175 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2318 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_0273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2710 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_0171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2322 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2714 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0174 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_0272 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2319 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2711 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:amyt03009]
D AMYT_2071 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AMYT_2118 era; GTP-binding protein K03595 era; GTPase
D AMYT_2064 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D AMYT_0561 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_2735 DksA family protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_0276 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D AMYT_2436 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D AMYT_2017 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D AMYT_2292 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D AMYT_0053 rsmA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AMYT_0371 rsmE; 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AMYT_1436 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AMYT_1646 rsmH; 16S rRNA m4C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AMYT_0108 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AMYT_2029 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D AMYT_0107 rRNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AMYT_0560 SPOUT methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AMYT_1762 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AMYT_0049 rlmN; 23S rRNA m2A2503 methyltransferase / tRNA m2A37 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AMYT_0056 rluB; 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AMYT_0023 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AMYT_2237 rluA; 23S rRNA and tRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AMYT_1262 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AMYT_0833 rimI; ribosomal-protein-S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AMYT_1862 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D AMYT_2233 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D AMYT_2477 radical SAM methylthiotransferase, MiaB/RimO family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AMYT_0564 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AMYT_2472 Holliday junction resolvase-like protein (UPF0081 domain) K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AMYT_1080 DEAD-box ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D AMYT_0072 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AMYT_1494 engA; GTP-binding protein K03977 engA; GTPase
D AMYT_0845 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AMYT_0350 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AMYT_0351 DUF150 domain-containing protein K09748 rimP; ribosome maturation factor RimP
D AMYT_0294 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AMYT_1842 ybeY; rRNA maturation RNase K07042 ybeY; probable rRNA maturation factor
D AMYT_1495 raiA; translation inhibitor protein RaiA K05808 hpf; ribosome hibernation promoting factor
D AMYT_0933 ychF; GTP-binding protein, putative GTP-dependent translation factor K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:amyt03016]
D AMYT_0491 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2'nucleotidase / phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AMYT_0048 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1465 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_0489 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AMYT_0623 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AMYT_0499 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AMYT_1458 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AMYT_0293 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AMYT_0857 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AMYT_0993 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AMYT_0313 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AMYT_0216 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AMYT_0436 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AMYT_2437 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AMYT_0669 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AMYT_1737 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_0154 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AMYT_0359 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AMYT_0358 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AMYT_0844 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AMYT_0403 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AMYT_0360 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AMYT_1260 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AMYT_2582 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AMYT_0324 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AMYT_0950 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D AMYT_0277 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D AMYT_0813 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1126 NifS/IscS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_0110 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AMYT_2078 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AMYT_2665 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AMYT_1105 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AMYT_2082 rnpA; ribonuclease P, protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AMYT_1691 rnpB; ribonuclease P, RNA component K01978 rnpB; M1 RNA
D AMYT_2241 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AMYT_1440 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AMYT_1044 ybaK; cysteinyl-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AMYT_0563 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AMYT_2434 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AMYT_2032 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D AMYT_1378 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D AMYT_2590 trmA; tRNA m5U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D AMYT_0384 trmD; tRNA m1G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AMYT_1583 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AMYT_1866 yfiC; tRNA m6A37 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D AMYT_0589 mnmA; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AMYT_1508 ttcA; tRNA cytosine32 2-sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AMYT_1700 FAD-dependent oxidoreductase, possible FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D AMYT_1627 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AMYT_0368 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AMYT_0367 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AMYT_0366 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AMYT_0013 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AMYT_2655 DUF208 domain-containing protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D AMYT_2463 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AMYT_1614 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AMYT_2478 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AMYT_0346 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AMYT_0254 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AMYT_1411 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AMYT_0820 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AMYT_2443 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AMYT_1488 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:amyt03012]
D AMYT_0255 eIF1/SUI1 family translation initiation factor K03113 EIF1; translation initiation factor 1
D AMYT_0349 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AMYT_0215 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AMYT_0388 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AMYT_0634 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D AMYT_2296 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AMYT_2250 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D AMYT_1100 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D AMYT_0201 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AMYT_2720 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D AMYT_1476 hemK; protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AMYT_0839 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AMYT_0988 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AMYT_0353 efp; translation elongation factor EF-P K02356 efp; elongation factor P
D AMYT_0336 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:amyt03110]
D AMYT_2190 clpA; ATP-dependent protease specificity component and chaperone K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AMYT_2085 clpB; ClpB chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AMYT_2659 clpX; ATP-dependent protease specificity component and chaperone K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AMYT_1730 hslU; heat shock protein HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D AMYT_2571 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D AMYT_0549 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AMYT_1398 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D AMYT_1705 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D AMYT_1624 djlA; DnaJ-like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D AMYT_2572 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AMYT_2750 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D AMYT_0548 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D AMYT_2544 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D AMYT_0565 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AMYT_1312 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AMYT_0382 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AMYT_0523 CpxP family two-component system-associated protein K06006 cpxP; periplasmic protein CpxP/Spy
D AMYT_2771 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D AMYT_1232 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D AMYT_1227 hypB; hydrogenase nickel insertion protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D AMYT_2317 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AMYT_1709 putative periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D AMYT_2044 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AMYT_1776 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AMYT_0478 peb4; major antigenic peptide / PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AMYT_0044 thioredoxin K03671 TXN; thioredoxin
D AMYT_2562 thioredoxin K03671 TXN; thioredoxin
D AMYT_0314 trxA; thioredoxin K03671 TXN; thioredoxin
D AMYT_0576 thioredoxin K03671 TXN; thioredoxin
D AMYT_1506 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AMYT_1332 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AMYT_2561 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:amyt04131]
D AMYT_2396 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AMYT_2021 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AMYT_0296 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AMYT_2414 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:amyt03051]
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:amyt03032]
D AMYT_2070 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AMYT_a0020 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0029 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0049 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_1648 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AMYT_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D AMYT_0861 dnaB; replicative DNA helicase (homing endonuclease-associated domain) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AMYT_a0162 putative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AMYT_2068 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2702 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AMYT_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_a0010 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_2441 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AMYT_1471 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AMYT_0598 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_0602 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1872 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1993 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_2389 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AMYT_2088 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AMYT_0118 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_0792 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_1947 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AMYT_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AMYT_2628 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AMYT_a0128 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:amyt03036]
D AMYT_a0020 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0029 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0049 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_2071 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AMYT_1648 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AMYT_1705 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D AMYT_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D AMYT_1845 DNA-binding ferritin-like protein K04047 dps; starvation-inducible DNA-binding protein
D AMYT_1536 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D AMYT_1708 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AMYT_1259 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AMYT_2316 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AMYT_1496 ftsK; DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AMYT_2315 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D AMYT_1258 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AMYT_1707 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AMYT_0842 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AMYT_0760 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AMYT_1304 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_0796 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_2660 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AMYT_2661 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AMYT_1263 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D AMYT_2059 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AMYT_2058 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AMYT_a0141 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AMYT_2665 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AMYT_1436 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AMYT_2683 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D AMYT_1482 xerH; integrase / recombinase K04763 xerD; integrase/recombinase XerD
D AMYT_a0087 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D AMYT_a0196 site-specific tyrosine recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D AMYT_0163 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AMYT_1721 engB; ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:amyt03400]
D AMYT_2108 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AMYT_2728 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AMYT_0829 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AMYT_a0079 Nudix domain-containing protein, MTH1 family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AMYT_2155 putative ADP-ribose pyrophosphatase YjhB, Nudix family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AMYT_0040 ada; O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AMYT_1349 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AMYT_0991 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AMYT_0127 exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_1018 xth1; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_2667 xth2; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AMYT_2652 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AMYT_2695 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AMYT_1363 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AMYT_1742 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D AMYT_0825 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D AMYT_1001 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D AMYT_0323 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_0667 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AMYT_2287 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AMYT_2286 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AMYT_1282 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AMYT_0846 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AMYT_0512 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AMYT_0578 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS
D AMYT_1316 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D AMYT_0537 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AMYT_1295 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AMYT_1628 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AMYT_2702 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AMYT_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_a0010 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AMYT_2441 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AMYT_1471 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AMYT_0598 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_0602 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1872 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_1993 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AMYT_2389 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_0118 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_0792 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_0379 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AMYT_1710 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AMYT_2621 recA; recombinase K03553 recA; recombination protein RecA
D AMYT_0953 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AMYT_2183 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AMYT_2777 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AMYT_1253 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AMYT_1999 SbcCD-like exonuclease, ATPase subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D AMYT_1609 sbcC; DNA repair exonuclease SbcCD, ATPase subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D AMYT_2000 SbcCD-like exonuclease, nuclease subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D AMYT_1610 sbcD; DNA repair exonuclease SbcCD, nuclease subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D AMYT_1841 radA; DNA repair and recombination protein K04485 radA; DNA repair protein RadA/Sms
D AMYT_1399 recR; recombination protein K06187 recR; recombination protein RecR
D AMYT_2248 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AMYT_0334 addB; AddAB recombination complex, helicase AddB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D AMYT_1818 cas1; CRISPR/Cas system-associated endonuclease Cas1, type II-C K15342 cas1; CRISP-associated protein Cas1
D AMYT_1947 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AMYT_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AMYT_2628 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AMYT_a0128 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AMYT_1648 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D AMYT_a0002 DNA single-strand annealing protein, RecT family K07455 recT; recombination protein RecT
D AMYT_0690 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AMYT_0655 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AMYT_0794 peptidase S24 LexA-like protein K01356 lexA; repressor LexA [EC:3.4.21.88]
D AMYT_0025 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AMYT_0026 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AMYT_0343 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:amyt03029]
D AMYT_0374 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AMYT_0349 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AMYT_0215 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AMYT_0634 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D AMYT_2296 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AMYT_2250 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D AMYT_2589 HELICc and SUV3_C domain-containing protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D AMYT_2118 era; GTP-binding protein K03595 era; GTPase
D AMYT_0844 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AMYT_0499 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AMYT_0993 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AMYT_0293 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AMYT_1284 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AMYT_0087 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AMYT_2466 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AMYT_2139 hypothetical protein K23499 RMND1; required for meiotic nuclear division protein 1
D AMYT_a0007 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_2439 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D AMYT_1468 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D AMYT_2571 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D AMYT_2572 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AMYT_0549 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AMYT_0548 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D AMYT_1398 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D AMYT_0813 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1126 NifS/IscS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_0163 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AMYT_2080 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:amyt02000]
D AMYT_0412 ABC transporter, ATP-binding/permease components K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D AMYT_0411 ABC transporter, ATP-binding/permease components K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D AMYT_1850 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AMYT_1885 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AMYT_1677 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AMYT_2532 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AMYT_1808 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D AMYT_1355 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AMYT_2444 extracellular solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AMYT_1353 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D AMYT_1352 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AMYT_1131 molybdate/sulfate/tungstate ABC transporter, periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D AMYT_1133 molybdate/sulfate/tungstate ABC transporter, permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D AMYT_1132 molybdate/sulfate/tungstate ABC transporter, ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D AMYT_1128 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D AMYT_1129 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein
D AMYT_1130 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D AMYT_2328 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AMYT_2329 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D AMYT_2330 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AMYT_2450 nitrate/sulfonate/bicarbonate ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AMYT_2453 nitrate/sulfonate/bicarbonate ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AMYT_2452 nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AMYT_1308 ABC transporter, periplasmic substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D AMYT_0089 UPF0014 domain-containing membrane protein, putative permease K02069 STAR2; UDP-glucose/iron transport system permease protein
D AMYT_0279 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AMYT_0281 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AMYT_0280 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AMYT_0278 putative lipid asymmetry ABC transporter MlaABCDEF component MlaB K18480 linN; cholesterol transport system auxiliary component
D AMYT_1196 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AMYT_0958 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_0200 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D AMYT_0959 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D AMYT_0198 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D AMYT_0960 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D AMYT_0197 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein
D AMYT_0961 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AMYT_0196 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AMYT_1387 phnD; phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AMYT_1388 phnE; phosphonate ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D AMYT_1386 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AMYT_1519 livK2; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1242 livK1; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_2087 periplasmic ligand-binding domain-containing protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AMYT_1518 livH2; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1243 livH1; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D AMYT_1517 livM2; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1244 livM1; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D AMYT_1516 livG2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1245 livG1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AMYT_1515 livF2; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1246 livF1; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AMYT_1754 metQ; DL-methionine ABC transporter MetINQ, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AMYT_1755 metI; DL-methionine ABC transporter MetINQ, permease protein K02072 metI; D-methionine transport system permease protein
D AMYT_1756 metN; DL-methionine ABC transporter MetINQ, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AMYT_0407 amino acid ABC transporter, periplasmic amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D AMYT_0406 amino acid ABC transporter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D AMYT_0812 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AMYT_2370 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AMYT_2369 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D AMYT_0720 nikA; nickel ABC transporter, periplasmic substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D AMYT_1236 nickel ABC transporter, periplasmic substrate-binding protein K15584 nikA; nickel transport system substrate-binding protein
D AMYT_0719 nikB; nickel ABC transporter, permease protein K15585 nikB; nickel transport system permease protein
D AMYT_1237 nickel ABC transporter, permease protein K15585 nikB; nickel transport system permease protein
D AMYT_0718 nikC; nickel ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D AMYT_1238 nickel ABC transporter, permease protein K15586 nikC; nickel transport system permease protein
D AMYT_0717 nikD; nickel ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_1239 nickel ABC transporter, ATP-binding protein K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_0716 nikE; nickel ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_1240 nickel ABC transporter, ATP-binding protein K10824 nikE; nickel transport system ATP-binding protein [EC:7.2.2.11]
D AMYT_0189 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AMYT_1928 putative periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AMYT_2474 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AMYT_1825 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AMYT_2305 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AMYT_1547 iron siderophore ABC transporter, periplasmic substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D AMYT_1545 iron siderophore ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D AMYT_1546 iron siderophore ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D AMYT_0994 metal-binding protein, ZntC/ZnuA family K09815 znuA; zinc transport system substrate-binding protein
D AMYT_0739 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D AMYT_0649 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein
D AMYT_0648 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AMYT_2259 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D AMYT_2261 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D AMYT_2258 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D AMYT_1859 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D AMYT_2262 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D AMYT_2260 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein
D AMYT_1860 putative membrane protein K16915 cbiL; nickel transport protein
D AMYT_2583 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein
D AMYT_0840 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein
D AMYT_1412 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AMYT_2753 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AMYT_1258 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D AMYT_1259 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AMYT_2145 nosY; copper ABC transporter NosDFY, putative permease protein NosY K01992 ABC-2.P; ABC-2 type transport system permease protein
D AMYT_0231 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AMYT_0232 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AMYT_2147 nosF; copper ABC transporter NosDFY, putative ATP-binding protein NosF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AMYT_1694 lolC; lipoprotein releasing system, transmembrane protein, LolC/E family K02004 ABC.CD.P; putative ABC transport system permease protein
D AMYT_2752 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AMYT_1566 ABC transporter, permease protein, FtsX/LolE family K02004 ABC.CD.P; putative ABC transport system permease protein
D AMYT_0635 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AMYT_1565 ABC transporter, ATP-binding protein, FtsE/LolD family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AMYT_0809 sufC; [Fe-S] cluster assembly scaffold SufBCD, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AMYT_1315 sodium:dicarboxylate cotransporter (permease SLC13 domain) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D AMYT_0103 MATE family efflux protein K26937 dinF; MATE family, multidrug efflux pump
D AMYT_1241 MATE family efflux protein K26937 dinF; MATE family, multidrug efflux pump
D AMYT_0945 MATE family efflux protein K26937 dinF; MATE family, multidrug efflux pump
D AMYT_1758 major facilitator superfamily transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D AMYT_2723 putative major facilitator superfamily transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D AMYT_0942 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AMYT_0410 major facilitator superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AMYT_2732 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AMYT_2253 major facilitator superfamily transporter K08156 araJ; MFS transporter, DHA1 family, arabinose polymer utilization protein
D AMYT_2194 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D AMYT_2577 major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D AMYT_1950 putative potassium channel protein (TrkA domain) K10716 kch; voltage-gated potassium channel
D AMYT_2020 TrkA domain-containing protein K10716 kch; voltage-gated potassium channel
D AMYT_1915 ion transporter K08714 VGSC; voltage-gated sodium channel
D AMYT_1994 ion transporter K08714 VGSC; voltage-gated sodium channel
D AMYT_2494 ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family
D AMYT_2496 ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family
D AMYT_0628 von Willebrand factor type A (vWA) domain-containing protein (BatA domain), putative oxygen tolerance protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D AMYT_2125 von Willebrand factor type A (vWA) domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D AMYT_2715 BAX inhibitor (BI)-1 like protein (UPF0005 domain) K19416 yccA; modulator of FtsH protease
D AMYT_0490 mscS; small conductance mechanosensitive channel protein K03442 mscS; small conductance mechanosensitive channel
D AMYT_1317 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D AMYT_2101 magnesium/cobalt/nickel transporter, MgtE family K06213 mgtE; magnesium transporter
D AMYT_2138 magnesium/cobalt/nickel transporter, MgtE family K06213 mgtE; magnesium transporter
D AMYT_2214 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D AMYT_2213 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D AMYT_0481 exbB2; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D AMYT_1576 exbB3; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D AMYT_0418 exbB1; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D AMYT_0419 ExbB domain-containing protein K03561 exbB; biopolymer transport protein ExbB
D AMYT_2050 tolQ; Tol-Pal system subunit TolQ K03561 exbB; biopolymer transport protein ExbB
D AMYT_1575 exbD3; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D AMYT_2049 tolR; Tol-Pal system subunit TolR K03559 exbD; biopolymer transport protein ExbD
D AMYT_0417 exbD1; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D AMYT_0480 exbD2; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D AMYT_1083 corAII; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D AMYT_0290 crcB; putative fluoride ion transporter K06199 crcB; fluoride exporter
D AMYT_1107 putative mercuric transport protein MerT K08363 merT; mercuric ion transport protein
D AMYT_1108 heavy-metal-associated domain-containing protein, putative mercuric reductase K08364 merP; periplasmic mercuric ion binding protein
D AMYT_1745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AMYT_2512 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AMYT_0586 cadF; outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AMYT_a0090 porin family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AMYT_1548 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D AMYT_0427 TonB-dependent ferric coprogen/ferric-rhodotorulic acid receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AMYT_0428 TonB-dependent ferric coprogen/ferric-rhodotorulic acid receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AMYT_0506 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AMYT_1177 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AMYT_2449 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AMYT_1088 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AMYT_1092 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AMYT_0830 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_2511 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_0940 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_1578 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_0413 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_0424 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_2533 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D AMYT_1235 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D AMYT_1468 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D AMYT_0686 beta-barrel assembly machinery complex, BamD/YfiO lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D AMYT_1888 RTX toxin-related calcium-binding protein (peptidase M10 serralysin domains) K21449 ata; trimeric autotransporter adhesin
D AMYT_1611 RTX toxin-related calcium-binding protein (peptidase M10 serralysin domains) K21449 ata; trimeric autotransporter adhesin
D AMYT_2457 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D AMYT_1722 lptA; lipooligosaccharide transport system, periplasmic component LptA K09774 lptA; lipopolysaccharide export system protein LptA
D AMYT_1490 lptD; lipooligosaccharide transport system, OM translocon component LptD K04744 lptD; LPS-assembly protein
D AMYT_2515 lrgA; murein hydrolase effector protein LrgA K06518 cidA; holin-like protein
D AMYT_1795 divalent metal cation transporter (ZT_dimer domain) K13283 fieF; ferrous-iron efflux pump FieF
D AMYT_1759 putative zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D AMYT_0092 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein
D AMYT_1305 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump
D AMYT_0799 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AMYT_2503 rarD; resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AMYT_1650 UPF0060 domain-containing membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D AMYT_1509 YuiF family protein, putative amino acid transporter K07084 yuiF; putative amino acid transporter
D AMYT_2521 anaerobic C4-dicarboxylate transporter, DcuA/DcuB family K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D AMYT_1010 lctP; L-lactate permease K03303 lutP; lactate permease
D AMYT_0531 BCCT (betaine/carnitine/choline) family transporter K02168 betT; choline/glycine/proline betaine transport protein
D AMYT_1543 tellurite-resistance/dicarboxylate transporter (TDT) family protein K03304 tehA; tellurite resistance protein
D AMYT_0521 calcium:sodium antiporter K07301 yrbG; cation:H+ antiporter
D AMYT_1843 calcium:sodium antiporter K07301 yrbG; cation:H+ antiporter
D AMYT_0600 actP1; acetate permease K14393 actP; cation/acetate symporter
D AMYT_0604 cation:acetate symporter K14393 actP; cation/acetate symporter
D AMYT_2111 actP2; acetate permease K14393 actP; cation/acetate symporter
D AMYT_1760 sstT; sodium ion-motive force-driven serine/threonine transporter K07862 sstT; serine/threonine transporter
D AMYT_2455 nhaA1; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D AMYT_2458 nhaA2; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D AMYT_0674 potassium:proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D AMYT_0505 glutathione-regulated potassium-efflux system protein, KefB/KefC family K03455 KEA1_2_3; K+:H+ antiporter
D AMYT_1147 glutathione-regulated potassium-efflux system protein, KefB/KefC family K03455 KEA1_2_3; K+:H+ antiporter
D AMYT_1913 xanthine/uracil permease K02824 uraA; uracil permease
D AMYT_1919 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AMYT_2560 sodium:sulfate symporter family protein K11106 ttdT; L-tartrate/succinate antiporter
D AMYT_2355 voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D AMYT_2501 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D AMYT_1766 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D AMYT_1978 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP
D AMYT_1979 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AMYT_1980 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AMYT_1071 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AMYT_1070 TRAP transporter, small permease subunit K21394 yiaM; TRAP-type transport system small permease protein
D AMYT_1069 TRAP transporter, substrate binding protein, DctP family K21395 yiaO; TRAP-type transport system periplasmic protein
D AMYT_1581 sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter
D AMYT_2508 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D AMYT_1849 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D AMYT_2649 putative permease K13936 mdcF; malonate transporter and related proteins
D AMYT_0308 putative permease K24180 mleP; malate permease and related proteins
D AMYT_1335 putative permease K24180 mleP; malate permease and related proteins
D AMYT_1342 putative permease K24180 mleP; malate permease and related proteins
D AMYT_2061 putative permease K24180 mleP; malate permease and related proteins
D AMYT_0310 putative permease K24180 mleP; malate permease and related proteins
D AMYT_2367 transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AMYT_0151 transporter, LysE family K05834 rhtB; homoserine/homoserine lactone efflux protein
D AMYT_0007 threonine/homoserine/homoserine lactone efflux protein, LysE family K05835 rhtC; threonine efflux protein
D AMYT_0261 branched-chain amino acid transport protein, AzlC family K26605 azlC; branched chain amino acid efflux pump
D AMYT_2403 branched-chain amino acid transport protein, AzlC family K26605 azlC; branched chain amino acid efflux pump
D AMYT_0260 branched-chain amino acid transport protein, AzlD family K26606 azlD; branched chain amino acid efflux pump
D AMYT_2402 branched-chain amino acid transport protein, AzlD family K26606 azlD; branched chain amino acid efflux pump
D AMYT_0181 tripartite tricarboxylate transport protein TctABC, permease subunit TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AMYT_0182 tripartite tricarboxylate transport protein TctABC, membrane-spanning subunit TctB K07794 tctB; putative tricarboxylic transport membrane protein
D AMYT_0183 tripartite tricarboxylate transport protein TctABC, extracytoplasmic tricarboxylate-binding receptor TctC K07795 tctC; putative tricarboxylic transport membrane protein
D AMYT_0129 putative membrane protein K23675 fmnP; riboflavin transporter
D AMYT_2555 MarC family membrane protein K05595 marC; multiple antibiotic resistance protein
D AMYT_2368 MarC family membrane protein K05595 marC; multiple antibiotic resistance protein
D AMYT_1247 small neutral amino acid transporter, MarC family K05595 marC; multiple antibiotic resistance protein
D AMYT_2315 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D AMYT_2021 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AMYT_0408 manganese efflux pump MntP K23242 mntP; manganese efflux pump family protein
D AMYT_0740 metal ion ABC transporter, permease protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D AMYT_1574 tonB3; energy transduction protein TonB K03832 tonB; periplasmic protein TonB
D AMYT_0416 tonB1; energy transduction protein TonB K03832 tonB; periplasmic protein TonB
D AMYT_2048 tolA; Tol-Pal system subunit TolA K03832 tonB; periplasmic protein TonB
D AMYT_1266 TonB domain-containing protein K03832 tonB; periplasmic protein TonB
D AMYT_2046 pal; Tol-Pal system peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D AMYT_2047 tolB; Tol-Pal system translocation protein TolB K03641 tolB; TolB protein
D AMYT_1453 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D AMYT_1455 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D AMYT_0929 molybdopterin-containing oxidoreductase III, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AMYT_1931 molybdopterin-containing oxidoreductase I, DMSO/TMAO/BSO reductase family, catalytic subunit K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AMYT_1905 anaerobic dehydrogenase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D AMYT_1904 [Fe-S] cluster-containing dehydrogenase component K08358 ttrB; tetrathionate reductase subunit B
D AMYT_0093 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system
D AMYT_1884 type I secretion system membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D AMYT_2531 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D AMYT_1676 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D AMYT_1304 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_0796 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_1005 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D AMYT_2174 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D AMYT_2175 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:amyt02044]
D AMYT_1885 type I secretion system ABC transporter, HlyB family K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D AMYT_1884 type I secretion system membrane fusion protein, HlyD family K11003 hlyD; membrane fusion protein, hemolysin D
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1677 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AMYT_2532 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AMYT_2531 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D AMYT_1676 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D AMYT_2533 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D AMYT_2027 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D AMYT_2105 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AMYT_2104 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F
D AMYT_0916 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D AMYT_2584 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AMYT_1464 YggT family membrane protein K02221 yggT; YggT family protein
D AMYT_0075 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D AMYT_1630 competence protein, ComEC family K02238 comEC; competence protein ComEC
D AMYT_0584 ctsW; transformation system, predicted amidophosphoribosyltransferase CtsW K02242 comFC; competence protein ComFC
D AMYT_2198 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D AMYT_2202 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D AMYT_1715 FlhB C-terminus-related protein K04061 flhB2; flagellar biosynthesis protein
D AMYT_2225 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AMYT_2223 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D AMYT_2200 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AMYT_2215 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D AMYT_2222 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D AMYT_1718 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D AMYT_2488 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D AMYT_2203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D AMYT_a0096 F-type type IV conjugative transfer system protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D AMYT_a0110 F-type type IV conjugative transfer system, ATPase TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D AMYT_a0117 F-type type IV conjugative transfer system protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D AMYT_a0109 F-type type IV conjugative transfer system, coupling factor TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D AMYT_1332 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AMYT_a0102 F-type type IV conjugative transfer system protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D AMYT_1693 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AMYT_0494 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AMYT_2293 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AMYT_0495 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D AMYT_2718 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AMYT_0986 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AMYT_2236 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AMYT_1831 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AMYT_0493 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AMYT_2080 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AMYT_0292 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AMYT_1625 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D AMYT_1626 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:amyt02042]
D AMYT_1745 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AMYT_2512 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:amyt02022]
D AMYT_0569 two-component system sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D AMYT_0180 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1068 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1929 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1233 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_0677 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1665 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0525 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_2546 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0096 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0098 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1902 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_2773 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0476 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1834 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_1579 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AMYT_0524 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_2545 cprR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_1903 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_2772 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_0477 cosR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_0081 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_0097 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_0099 two-component system response regulator, putative CusR K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_1666 dccR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AMYT_2519 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D AMYT_2304 signal transduction response regulator K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D AMYT_2113 two-component system response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D AMYT_1433 PAS sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1028 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1110 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1910 signal transduction sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1927 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1981 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_0474 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_2193 Cache sensor-containing signal transduction histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AMYT_1231 hypX; [Ni-Fe] hydrogenase maturation protein HypX K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX
D AMYT_0932 multi-sensor domain-containing two-component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_0141 Cache sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2084 Cache sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2156 PAS sensor-containing signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_2536 Cache sensor-containing two-component system histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D AMYT_1486 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AMYT_2229 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1487 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1702 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1483 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AMYT_0819 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AMYT_1094 two-component system sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D AMYT_1996 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_0671 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_0676 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D AMYT_1187 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:amyt02035]
D AMYT_1486 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AMYT_0540 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AMYT_1703 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC
D AMYT_1484 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D AMYT_1485 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AMYT_1483 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AMYT_2229 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1487 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_1702 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AMYT_0819 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D AMYT_0381 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0952 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0694 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0724 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0725 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1570 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1573 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2423 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2425 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2426 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1685 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0947 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1011 Cache sensor-containing signal transduction histidine kinase K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1067 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1085 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2747 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1225 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2031 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2120 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2140 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1401 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2246 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_1569 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_0538 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D AMYT_2223 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D AMYT_2200 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AMYT_1718 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D AMYT_2488 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D AMYT_2203 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D AMYT_2198 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D AMYT_2202 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D AMYT_2224 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D AMYT_2491 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D AMYT_2215 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D AMYT_2222 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D AMYT_2225 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AMYT_2490 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AMYT_2483 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D AMYT_2485 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL
D AMYT_2206 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AMYT_2226 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AMYT_2205 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AMYT_2221 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AMYT_2227 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D AMYT_2230 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D AMYT_2212 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AMYT_2219 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D AMYT_2220 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D AMYT_2482 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1
D AMYT_2199 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D AMYT_1661 putative flagellar protein K02406 fliC; flagellin
D AMYT_2188 fla1; flagellin K02406 fliC; flagellin
D AMYT_2591 fla2; flagellin K02406 fliC; flagellin
D AMYT_2593 fla3; flagellin K02406 fliC; flagellin
D AMYT_2594 fla4; flagellin K02406 fliC; flagellin
D AMYT_2481 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D AMYT_2480 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AMYT_2214 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D AMYT_2213 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D AMYT_1713 putative flagellin level sensor protein FliW K13626 fliW; flagellar assembly factor FliW
D AMYT_2442 fliW; putative flagellin level sensor protein FliW K13626 fliW; flagellar assembly factor FliW
D AMYT_2209 flhF; polar flagellar biogenesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D AMYT_2208 flhG; polar flagellar biogenesis regulatory protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D AMYT_2584 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:amyt04812]
D AMYT_2660 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AMYT_1707 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AMYT_1708 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AMYT_2059 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AMYT_2058 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AMYT_a0141 partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:amyt04147]
D AMYT_1053 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D AMYT_2622 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AMYT_0296 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AMYT_0297 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AMYT_2414 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AMYT_0140 ahpC1; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D AMYT_2393 ahpC2; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D AMYT_0549 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AMYT_2571 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D AMYT_0863 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AMYT_1285 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AMYT_2296 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AMYT_0360 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AMYT_1207 fadD; long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AMYT_1206 fadI; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AMYT_0997 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AMYT_0920 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AMYT_0818 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AMYT_1408 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AMYT_1460 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AMYT_2307 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AMYT_1434 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AMYT_1840 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_0354 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AMYT_2097 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AMYT_1800 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AMYT_0298 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:amyt02048]
D AMYT_1818 cas1; CRISPR/Cas system-associated endonuclease Cas1, type II-C K15342 cas1; CRISP-associated protein Cas1
D AMYT_1819 cas2; CRISPR/Cas system-associated endoribonuclease Cas2, type II-C K09951 cas2; CRISPR-associated protein Cas2
D AMYT_1817 cas9; CRISPR/Cas system-associated RNA-guided endonuclease Cas9, type II-C K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D AMYT_0118 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_0792 type II DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AMYT_1599 type II DNA methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AMYT_a0020 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0029 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_a0049 type II cytosine-specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AMYT_2682 type III restriction/modification system, restriction subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D AMYT_2681 type III restriction/modification system, modification subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D AMYT_a0177 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AMYT_1707 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AMYT_2660 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AMYT_0048 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_1465 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AMYT_0813 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_1126 NifS/IscS family cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AMYT_a0042 DndC family protein K19170 dndC; DNA sulfur modification protein DndC
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:amyt01504]
D AMYT_2194 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D AMYT_1235 outer membrane porin, OprD family K18093 oprD; imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
D AMYT_0180 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1068 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1929 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_1233 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_0677 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D AMYT_2706 D-alanyl-D-alanine carboxypeptidase, VanY family K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D AMYT_1304 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_0796 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D AMYT_1305 RND family efflux system, inner membrane transporter, AcrB family K18138 acrB; multidrug efflux pump
D AMYT_1886 type I secretion system outer membrane protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1881 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_1303 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D AMYT_0798 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:amyt03100]
D AMYT_2039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0271 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2320 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0173 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_2712 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AMYT_0268 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_0114 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_0265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AMYT_1940 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_1942 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_1941 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AMYT_0617 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_0613 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_0609 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AMYT_2539 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AMYT_2008 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_1449 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_1444 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AMYT_0615 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0619 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0608 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_0611 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_1299 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AMYT_2013 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_2297 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_0267 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_2012 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AMYT_0264 tRNA-His K14226 tRNA-His; tRNA His
D AMYT_2005 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2321 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_0172 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2713 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_0270 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_2040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AMYT_1179 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_1649 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_2542 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0266 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AMYT_0620 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_0612 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_0616 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AMYT_2010 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1446 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_2014 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_2011 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1448 tRNA-Met K14230 tRNA-Met; tRNA Met
D AMYT_1180 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AMYT_2300 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AMYT_0263 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AMYT_2541 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AMYT_2015 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AMYT_1445 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2299 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AMYT_2294 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AMYT_2298 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AMYT_1181 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AMYT_0618 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_0610 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_0614 tRNA-Val K14237 tRNA-Val; tRNA Val
D AMYT_1102 selC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AMYT_0171 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0269 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2006 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2322 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_2714 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AMYT_0174 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_0272 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2319 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2038 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_2711 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AMYT_0175 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2318 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_0273 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2002 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2710 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_2037 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AMYT_0019 srpB; bacterial signal recognition particle RNA (4.5S RNA) K01983 ffs; SRP RNA
D AMYT_1691 rnpB; ribonuclease P, RNA component K01978 rnpB; M1 RNA
D AMYT_2133 ssrA; 10Sa RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AMYT_1757 short-chain dehydrogenase/reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D AMYT_2606 TPP-dependent dehydrogenase, beta subunit K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D AMYT_1774 glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D AMYT_0879 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D AMYT_2132 saccharopine dehydrogenase-like protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D AMYT_1338 flavodoxin-like fold domain-containing protein, putative NAD(P)H (quinone) dehydrogenase/reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D AMYT_1835 cytochrome c K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D AMYT_2092 msrAB; bifunctional (RS)-methionine sulfoxide reductase A/B K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D AMYT_0653 yedY; periplasmic DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D AMYT_0036 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AMYT_1086 ccpA; periplasmic diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AMYT_0732 diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AMYT_2033 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AMYT_0651 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AMYT_1213 hyaB; [Ni-Fe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D AMYT_1218 hydB; [Ni-Fe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D AMYT_1212 hyaA; [Ni-Fe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D AMYT_1217 hydA; [Ni-Fe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D AMYT_0018 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AMYT_0948 superoxide reductase-like protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D AMYT_1035 nonheme-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D AMYT_1712 arsenate reductase (ArsC) family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AMYT_2506 arsC; arsenate reductase, LMWPc family K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AMYT_1428 nrdG; anaerobic ribonucleoside triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D AMYT_0646 AmmeMemoRadiSam system radical SAM enzyme/protein B K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D AMYT_0583 carbamoyltransferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D AMYT_2688 carbamoyltransferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D AMYT_2278 carbamoyltransferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D AMYT_2257 acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D AMYT_0492 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AMYT_1038 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D AMYT_1321 acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D AMYT_2187 aat; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AMYT_2180 ate; arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D AMYT_1351 modD; quinolinate phosphoribosyltransferase-like protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D AMYT_1422 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AMYT_0745 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AMYT_0885 sugar transferase K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D AMYT_1533 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AMYT_2076 sixA2; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D AMYT_2077 sixA1; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D AMYT_1920 DUF89 domain-containing protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D AMYT_1350 two-component system response regulator c-di-GMP phosphodiesterase, RpfG family K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AMYT_1167 DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D AMYT_1728 tatD; ssDNA/RNA exonuclease, 3' - 5' specific K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AMYT_2122 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AMYT_0890 deacetylase, PIG-L family K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D AMYT_2719 polysaccharide deacetylase K21478 icaB; poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
D AMYT_0700 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AMYT_2067 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AMYT_0631 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AMYT_a0108 ATP-binding protein (AAA domain) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AMYT_0253 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D AMYT_0257 carbohydrate kinase, YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AMYT_1140 2-hydroxyacyl-CoA dehydratase activator protein K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D AMYT_1899 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D AMYT_1926 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D AMYT_1772 putative sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A
D AMYT_0130 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D AMYT_0077 lutA; L-lactate utilization protein LutA K18928 lldE; L-lactate dehydrogenase complex protein LldE
D AMYT_0078 lutB; L-lactate utilization protein LutB K18929 lldF; L-lactate dehydrogenase complex protein LldF
D AMYT_0079 lutC; L-lactate utilization protein LutC K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D AMYT_1123 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D AMYT_0814 iscU; [Fe-S] cluster assembly scaffold protein K13819 K13819; NifU-like protein
D AMYT_0442 napD; periplasmic nitrate reductase assembly protein K02570 napD; periplasmic nitrate reductase NapD
D AMYT_0444 napF; ferredoxin-type protein K02572 napF; ferredoxin-type protein NapF
D AMYT_2162 fldA1; flavodoxin K03839 fldA; flavodoxin I
D AMYT_2163 fldA2; flavodoxin K03839 fldA; flavodoxin I
D AMYT_2164 fldA3; flavodoxin K03839 fldA; flavodoxin I
D AMYT_0447 napG; menaquinol dehydrogenase NapGH, periplasmic component NapG K02573 napG; ferredoxin-type protein NapG
D AMYT_2151 nosG; menaquinol dehydrogenase NosGH, periplasmic component NosG K02573 napG; ferredoxin-type protein NapG
D AMYT_0446 napH; menaquinol dehydrogenase NapGH, membrane component NapH K02574 napH; ferredoxin-type protein NapH
D AMYT_2148 nosH; menaquinol dehydrogenase NosGH, membrane component NosH K02574 napH; ferredoxin-type protein NapH
D AMYT_0455 cytochrome d1 heme domain protein, putative heme d1 dehydrogenase NirF K19345 nirF; protein NirF
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D AMYT_1857 type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AMYT_2069 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D AMYT_0456 heme d1 biosynthesis radical SAM protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D AMYT_1461 mobB; molybdenum cofactor guanylyltransferase protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D AMYT_1173 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D AMYT_0946 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase
D AMYT_0748 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AMYT_2263 cold shock protein K03704 cspA; cold shock protein
D AMYT_1078 transcriptional accessory protein Tex K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D AMYT_2538 META domain-containing protein K03668 hslJ; heat shock protein HslJ
D AMYT_2191 clpS; ClpAP chaperone-protease complex specificity factor K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AMYT_2124 tig; trigger factor (peptidyl-prolyl cis/trans isomerase, chaperone) K03545 tig; trigger factor
D AMYT_0654 yedZ; periplasmic DMSO/TMAO reductase YedYZ, heme-binding membrane subunit K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D AMYT_0326 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D AMYT_1228 hypC; hydrogenase assembly chaperone HypC K04653 hypC; hydrogenase expression/formation protein HypC
D AMYT_1229 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D AMYT_1230 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D AMYT_1222 hypF; [Ni-Fe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D AMYT_2119 magnesium chelatase-related protein K07391 comM; magnesium chelatase family protein
D AMYT_0137 2OG-Fe(II) oxygenase family protein K07394 K07394; SM-20-related protein
D AMYT_1012 DsbA family protein, FrnE-like subfamily K07396 K07396; putative protein-disulfide isomerase
C 99976 Replication and repair
D AMYT_1529 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D AMYT_0533 magIII; 3-methyladenine DNA glycosylase K07457 K07457; endonuclease III related protein
D AMYT_2421 UPF0102 domain-containing protein K07460 yraN; putative endonuclease
D AMYT_2448 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D AMYT_0057 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D AMYT_2674 integrase (rve domain) K07497 K07497; putative transposase
D AMYT_0754 prophage Mu, DNA transposition protein A K07497 K07497; putative transposase
D AMYT_0115 site-specific tyrosine recombinase, phage integrase family (INT_ICEBs1_C_like domain) K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D AMYT_0546 YbaB/EbfC DNA-binding family protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AMYT_1880 RND family efflux system, inner membrane transporter, AcrB family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D AMYT_0070 inorganic phosphate transporter, PitA family K03306 TC.PIT; inorganic phosphate transporter, PiT family
D AMYT_1223 sodium-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AMYT_1629 sodium-dependent transporter, SNF family K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D AMYT_1026 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AMYT_0256 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AMYT_0317 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AMYT_0698 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D AMYT_2374 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D AMYT_2079 Jag domain-containing protein K06346 jag; spoIIIJ-associated protein
D AMYT_1073 allophanate hydrolase, subunit 1 K06351 kipI; inhibitor of KinA
C 99993 Cell motility
C 99995 Signaling proteins
D AMYT_2751 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D AMYT_0059 putative ribonuclease, YlaK/PhoH family K07175 phoH2; PhoH-like ATPase
D AMYT_1098 putative ribonuclease, YlaK/PhoH family K07175 phoH2; PhoH-like ATPase
D AMYT_0599 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein
D AMYT_0603 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein
D AMYT_1909 putative YajQ-like nucleotide-binding protein (DUF520 domain) K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AMYT_1692 lolA; periplasmic outer membrane-specific lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein
D AMYT_1197 mlaA; lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AMYT_2535 putative autoinducer 2 (AI-2E family) transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D AMYT_0195 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D AMYT_1623 BFD-like [2Fe-2S]-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin
D AMYT_0258 putative CutA divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D AMYT_1393 phnK; carbon-phosphorus lyase subunit PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D AMYT_2734 hemerythrin (two domain) K07216 hr; hemerythrin
D AMYT_2152 nosD; copper ABC transporter NosDFY, periplasmic copper-binding protein NosD K07218 nosD; nitrous oxidase accessory protein
D AMYT_0728 imelysin-like iron-regulated protein A-like protein, IrpA family K07231 K07231; putative iron-regulated protein
D AMYT_0652 putative heme-copper protein NnrS K07234 K07234; uncharacterized protein involved in response to NO
D AMYT_2451 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D AMYT_2146 NosL domain-containing protein K19342 nosL; copper chaperone NosL
D AMYT_2144 NosL domain-containing protein K19342 nosL; copper chaperone NosL
D AMYT_1563 hypothetical protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AMYT_0858 CvpA family membrane protein K03558 cvpA; membrane protein required for colicin V production
D AMYT_2631 hypothetical protein K03796 bax; Bax protein
D AMYT_1048 globin K06886 glbN; hemoglobin
D AMYT_2701 Patatin-like phospholipase K07001 K07001; NTE family protein
D AMYT_0810 sufB; [Fe-S] cluster assembly scaffold SufBCD, SufB protein K09014 sufB; Fe-S cluster assembly protein SufB
D AMYT_0808 sufD; [Fe-S] cluster assembly scaffold SufBCD, SufD protein K09015 sufD; Fe-S cluster assembly protein SufD
D AMYT_2036 BrkB/YihY/UPF0761 family membrane protein, possible virulence factor K07058 K07058; membrane protein
D AMYT_1489 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D AMYT_0806 sufE; sulfur acceptor/SufS accessory protein K02426 sufE; cysteine desulfuration protein SufE
D AMYT_1082 LemA family protein K03744 lemA; LemA protein
D AMYT_1877 pqiA1; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D AMYT_1878 pqiA2; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D AMYT_2725 YchJ family protein (SEC-C domain) K09858 K09858; SEC-C motif domain protein
D AMYT_2737 Cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
D AMYT_0132 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D AMYT_1261 fibronectin type III domain-containing protein K06882 K06882; uncharacterized protein
D AMYT_0780 phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D AMYT_0791 putative phage tail protein K06905 D; Bacteriophage probable baseplate hub protein
D AMYT_0785 major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D AMYT_1255 DUF234 domain-containing protein K06921 K06921; uncharacterized protein
D AMYT_a0143 ATP-binding protein (AAA domain) K06921 K06921; uncharacterized protein
D AMYT_a0170 ATP-binding protein (AAA domain) K06921 K06921; uncharacterized protein
D AMYT_1682 putative ATPase, archaeal AAA+ ATPase superfamily K06921 K06921; uncharacterized protein
D AMYT_0394 ATP-binding protein (AAA, DUF815 domains) K06923 K06923; uncharacterized protein
D AMYT_0475 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein
D AMYT_2074 putative DNA-binding protein (DUF134 domain) K06933 K06933; uncharacterized protein
D AMYT_1865 putative [Fe-S] cluster-containing protein K06940 K06940; uncharacterized protein
D AMYT_1437 hypothetical protein K06950 K06950; uncharacterized protein
D AMYT_2234 putative RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D AMYT_1861 peptidase M14 family metallocarboxypeptidase, succinylglutamate desuccinylase/aspartoacylase-like protein K06987 K06987; uncharacterized protein
D AMYT_1836 esterase (UPF0227 domain) K07000 K07000; uncharacterized protein
D AMYT_1195 RND superfamily transporter K07003 K07003; uncharacterized protein
D AMYT_0234 putative membrane protein K07003 K07003; uncharacterized protein
D AMYT_1331 nitroimidazol reductase (NimA) family protein K07005 K07005; uncharacterized protein
D AMYT_0580 NAD-dependent epimerase/dehydratase (DUF1731 domain) K07071 K07071; uncharacterized protein
D AMYT_2578 TRAP transporter, substrate binding protein, TAXI family K07080 K07080; uncharacterized protein
D AMYT_1058 TRAP transporter, substrate binding protein, TAXI family K07080 K07080; uncharacterized protein
D AMYT_2505 arsP; arsenic resistance permease K07089 K07089; uncharacterized protein
D AMYT_1740 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AMYT_1037 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AMYT_1055 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AMYT_1936 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AMYT_1024 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AMYT_2627 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein
D AMYT_0472 oligoribonuclease NrnB K07097 K07097; uncharacterized protein
D AMYT_2748 membrane-associated metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein
D AMYT_2758 metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein
D AMYT_2764 fdhT; formate dehydrogenase biogenesis protein FdhT K07112 K07112; uncharacterized protein
D AMYT_1669 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D AMYT_0999 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D AMYT_0848 ATP-binding protein (AAA domain) K07133 K07133; uncharacterized protein
D AMYT_0321 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D AMYT_0744 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D AMYT_1939 putative membrane protein K07149 K07149; uncharacterized protein
D AMYT_2239 zinc ribbon domain-containing protein (DUF164 domain) K07164 K07164; uncharacterized protein
D AMYT_2081 membrane protein insertion efficiency factor, YidD family K08998 K08998; uncharacterized protein
D AMYT_1809 GatB/YqeY family protein K09117 K09117; uncharacterized protein
D AMYT_0644 AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein
D AMYT_2707 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D AMYT_2620 DUF354 domain-containing protein K09726 K09726; uncharacterized protein
D AMYT_2283 YciI domain-containing protein K09780 K09780; uncharacterized protein
D AMYT_1562 sulfite exporter TauE/SafE family protein (DsbD_2 domain) K09792 K09792; uncharacterized protein
D AMYT_1948 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D AMYT_2447 divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D AMYT_0156 DUF507 domain-containing protein K09804 K09804; uncharacterized protein
D AMYT_0650 putative RNA-binding protein (S1 domain) K00243 K00243; uncharacterized protein
D AMYT_2724 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D AMYT_1892 DUF2062 domain-containing membrane protein K09928 K09928; uncharacterized protein
D AMYT_1827 putative membrane protein K09939 K09939; uncharacterized protein
D AMYT_1087 putative membrane protein K09939 K09939; uncharacterized protein
D AMYT_1291 putative membrane protein K09943 K09943; uncharacterized protein
D AMYT_2462 hypothetical protein K09944 K09944; uncharacterized protein
D AMYT_2416 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D AMYT_0520 putative transcriptional regulator (zinc finger domain) K09981 K09981; uncharacterized protein
D AMYT_0832 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D AMYT_0348 putative RNA-binding protein (DUF448 domain) K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024