+D GENES KO #

  KEGG Orthology (KO) - Arthrobacter sp. Rue61a

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:arr00010] D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c22510 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ARUE_c31240 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D ARUE_c12390 ywjI; uncharacterized protein YwjI K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D ARUE_232p01280 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c13840 fba2; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c05240 fba1; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c22470 tpiA3; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ARUE_c22450 gap1; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c25660 gap2; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c22460 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ARUE_c08450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ARUE_c17470 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D ARUE_c20260 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ARUE_c35260 aceE3; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c25880 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c20450 aceE1; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c16590 dltA; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c27820 putative zinc-type alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c21940 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c32130 putative acetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c38450 yihR2; uncharacterized protein YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ARUE_c12170 yihR1; uncharacterized protein YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c16380 ppgK; polyphosphate glucokinase PpgK K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D ARUE_c07830 pckG; phosphoenolpyruvate carboxykinase (GTP) PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D ARUE_c30400 simA; 6-phospho-alpha-glucosidase 1 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] C 00020 Citrate cycle (TCA cycle) [PATH:arr00020] D ARUE_c29480 gltA2; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ARUE_c16940 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D ARUE_c11370 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ARUE_c27920 kgd; 2-oxoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c09990 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ARUE_c09980 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ARUE_c05370 putative FAD-dependent oxidoreductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11810 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11800 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ARUE_c11830 sdhC; succinate:quinone oxidoreductase C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ARUE_c11820 sdhD; succinate dehydrogenase, membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ARUE_c12360 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ARUE_c05390 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ARUE_c26750 mqo; putative malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D ARUE_c15960 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D ARUE_c07830 pckG; phosphoenolpyruvate carboxykinase (GTP) PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D ARUE_c35260 aceE3; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c25880 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c20450 aceE1; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c16590 dltA; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:arr00030] D ARUE_c22510 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ARUE_c22500 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c26140 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c22480 pgl; 6-phosphogluconolactonase Pgl K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D ARUE_c00030 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ARUE_c25740 yqjI; 6-phosphogluconate dehydrogenase YqjI K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ARUE_c17260 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ARUE_c08130 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c08140 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c22530 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c37120 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c37130 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c42580 putative transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c42590 putative transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c22520 tal; transaldolase Tal K00616 TALDO1; transaldolase [EC:2.2.1.2] D ARUE_c18630 putative sugar phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c25430 rpiB2; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c42640 rpiB3; ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c10560 rpiB1; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c04640 rmpA; 3-hexulose-6-phosphate synthase RmpA K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D ARUE_c04630 rmpB; 3-hexulose-6-phosphate isomerase RmpB K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D ARUE_c19620 putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D ARUE_c12970 deoC; deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D ARUE_c37840 rbsK2; ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D ARUE_c10740 rbsK1; ribokinase RbsK K00852 rbsK; ribokinase [EC:2.7.1.15] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c12810 prs; ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ARUE_c42030 putative 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ARUE_c19750 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ARUE_c19700 gdhII; glucose 1-dehydrogenase 2 K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D ARUE_c05350 gnl; gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D ARUE_c28750 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D ARUE_c05010 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D ARUE_c42060 kdgK; 2-dehydro-3-deoxygluconokinase KdgK K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D ARUE_232p01280 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c13840 fba2; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c05240 fba1; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c12390 ywjI; uncharacterized protein YwjI K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D ARUE_c31240 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:arr00040] D ARUE_c02340 pme; pectinesterase Pme K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D ARUE_c04980 uxaC; uronate isomerase UxaC K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D ARUE_c05000 uncharacterized protein ORF2 in instable DNA locus K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D ARUE_c04990 uxuB; D-mannonate oxidoreductase UxuB K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D ARUE_c33150 rkpK; UDP-glucose 6-dehydrogenase RkpK K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c11170 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c30050 yngB; putative UTP--glucose-1-phosphate uridylyltransferase YngB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ARUE_c38430 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D ARUE_c17260 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D ARUE_c38440 araA; L-arabinose isomerase AraA K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D ARUE_c38420 araB; ribulokinase AraB K00853 araB; L-ribulokinase [EC:2.7.1.16] D ARUE_c38400 xylB; xylulose kinase XylB K00854 xylB; xylulokinase [EC:2.7.1.17] D ARUE_c38390 xylA; xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D ARUE_c00520 putative sugar alcohol dehydrogenase/oxidase/alditol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41] D ARUE_c38480 putative L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D ARUE_c38500 rhaB; rhamnulokinase RhaB K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D ARUE_c37160 gutB; sorbitol dehydrogenase GutB K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D ARUE_232p01560 aldH; NADP-dependent fatty aldehyde dehydrogenase AldH K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D ARUE_c10300 ycbD; putative aldehyde dehydrogenase YcbD K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] C 00051 Fructose and mannose metabolism [PATH:arr00051] D ARUE_c00580 frk1; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c03870 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c06580 frk2; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c20920 frk3; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c12410 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D ARUE_c07870 manB; phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c13150 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c11840 manC; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ARUE_c33120 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ARUE_c33130 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ARUE_c39320 pld; pyridoxal 4-dehydrogenase Pld K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ARUE_c39310 putative metal-dependent hydrolase, TIM barrel fold protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120] D ARUE_c39350 mandelate racemase-like protein, enolase superfamily K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68] D ARUE_c18370 fumarylacetoacetate (FAA) superfamily protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D ARUE_c39360 fumarylacetoacetate hydrolase (FAA) superfamily protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26] D ARUE_c18400 putative short-chain dehydrogenase/reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401] D ARUE_c38480 putative L-rhamnose isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-] D ARUE_c38500 rhaB; rhamnulokinase RhaB K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D ARUE_c31240 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D ARUE_c12390 ywjI; uncharacterized protein YwjI K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D ARUE_c40010 mtlD; mannitol-1-phosphate 5-dehydrogenase MtlD K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D ARUE_c02930 fruK1; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D ARUE_c08150 fruK2; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D ARUE_c37160 gutB; sorbitol dehydrogenase GutB K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D ARUE_c00520 putative sugar alcohol dehydrogenase/oxidase/alditol oxidase K00594 xyoA; alditol oxidase [EC:1.1.3.41] D ARUE_c38390 xylA; xylose isomerase XylA K01805 xylA; xylose isomerase [EC:5.3.1.5] D ARUE_232p01280 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c13840 fba2; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c05240 fba1; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c22470 tpiA3; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ARUE_c06570 sacC1; levanase SacC K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D ARUE_c13160 sacC2; levanase SacC K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] D ARUE_c18630 putative sugar phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c25430 rpiB2; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c42640 rpiB3; ribose 5-phosphate isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c10560 rpiB1; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D ARUE_c30130 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D ARUE_c02920 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D ARUE_c40020 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D ARUE_c07490 putative haloacid dehalogenase-like hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:arr00052] D ARUE_c38450 yihR2; uncharacterized protein YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ARUE_c12170 yihR1; uncharacterized protein YihR K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D ARUE_c12150 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D ARUE_c12160 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D ARUE_c23060 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c29470 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c01180 putative NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c30050 yngB; putative UTP--glucose-1-phosphate uridylyltransferase YngB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c31820 lacZ; beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D ARUE_c34460 bgaB2; beta-galactosidase 1 K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D ARUE_c42250 bgaB3; beta-galactosidase 1 K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D ARUE_c29750 gLB; beta-galactosidase GLB K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D ARUE_c10790 bgaB1; beta-galactosidase 1 K12308 bgaB; beta-galactosidase [EC:3.2.1.23] D ARUE_c28320 rfbD; putative UDP-galactopyranose mutase RfbD K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D ARUE_c35000 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D ARUE_c31240 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D ARUE_c02550 gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D ARUE_c08980 putative glycosyl hydrolases family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c20900 6-FEH: fructan 6-exohydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c32680 rafD; raffinose invertase RafD K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c08700 aglA1; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c08740 malZ; maltodextrin glucosidase MalZ K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c31590 aglA2; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c43120 glycosyl hydrolase family 31 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:arr00053] D ARUE_c33150 rkpK; UDP-glucose 6-dehydrogenase RkpK K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c11170 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c05350 gnl; gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D ARUE_c39320 pld; pyridoxal 4-dehydrogenase Pld K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D ARUE_c38430 ulaF; L-ribulose-5-phosphate 4-epimerase UlaF K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_232p01560 aldH; NADP-dependent fatty aldehyde dehydrogenase AldH K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] D ARUE_c34550 putative 5-dehydro-4-deoxyglucarate dehydratase 1 K01707 kdgD; 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] D ARUE_c00340 mdlA1; mandelate racemase MdlA K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:arr00500] D ARUE_c08980 putative glycosyl hydrolases family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c20900 6-FEH: fructan 6-exohydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c32680 rafD; raffinose invertase RafD K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D ARUE_c08700 aglA1; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c08740 malZ; maltodextrin glucosidase MalZ K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c31590 aglA2; putative alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c43120 glycosyl hydrolase family 31 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D ARUE_c13170 lsdA; levansucrase LsdA K00692 sacB; levansucrase [EC:2.4.1.10] D ARUE_c20910 levB2; levanbiose-producing levanase LevB K18775 lf2; levanbiose-producing levanase [EC:3.2.1.64] D ARUE_c30050 yngB; putative UTP--glucose-1-phosphate uridylyltransferase YngB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ARUE_c18440 bglX1; extracellular beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18700 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c20320 glycosyl hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c06220 cbg-1: beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18540 bglA3; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c30990 bglA4; beta-glucosidase BglA K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c00830 bglA1; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c30400 simA; 6-phospho-alpha-glucosidase 1 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D ARUE_c22920 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D ARUE_c08630 glgB; 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ARUE_c08600 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D ARUE_c08570 glgX1; glycogen operon protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D ARUE_c02210 amy; secreted alpha-amylase Amy K01176 AMY; alpha-amylase [EC:3.2.1.1] D ARUE_c08620 treS1; trehalose synthase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D ARUE_c08610 putative glycosyl hydrolase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D ARUE_c22930 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D ARUE_c30480 glgX2; glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D ARUE_c30470 treY; maltooligosyl trehalose synthase TreY K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D ARUE_c30460 treZ; malto-oligosyltrehalose trehalohydrolase TreZ K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D ARUE_c08840 otsA; trehalose-6-phosphate synthase OtsA K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D ARUE_c08830 otsB; trehalose-6-phosphate phosphatase OtsB K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D ARUE_c03040 putative glycosyl hydrolase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c22510 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ARUE_c00580 frk1; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c03870 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c06580 frk2; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c20920 frk3; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:arr00520] D ARUE_c33560 putative glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D ARUE_c28990 nagZ; beta-hexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ARUE_c42180 ybbD; putative lipoprotein YbbD K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ARUE_c08810 hex; beta-N-acetylhexosaminidase Hex K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c42340 nahA; beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c27440 nagA; N-acetylglucosamine-6-phosphate deacetylase NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D ARUE_c27340 nagB1; glucosamine-6-phosphate deaminase NagB K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D ARUE_c37380 nagB2; glucosamine-6-phosphate deaminase NagB K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D ARUE_c00580 frk1; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c03870 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c06580 frk2; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c20920 frk3; fructokinase Frk K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D ARUE_c30510 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ARUE_c30540 glmM; phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D ARUE_c12800 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ARUE_c11290 murQ; N-acetylmuramic acid 6-phosphate etherase MurQ K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D ARUE_c38020 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c26390 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c31470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ARUE_c07740 nanE; putative N-acetylmannosamine-6-phosphate 2-epimerase NanE K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D ARUE_c04960 putative lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D ARUE_c28350 putative acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D ARUE_c06520 abfA2; alpha-N-arabinofuranosidase AbfA K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D ARUE_c01980 abfA1; alpha-N-arabinofuranosidase AbfA K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55] D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c16380 ppgK; polyphosphate glucokinase PpgK K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c30050 yngB; putative UTP--glucose-1-phosphate uridylyltransferase YngB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ARUE_c33150 rkpK; UDP-glucose 6-dehydrogenase RkpK K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c11170 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c12150 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D ARUE_c12160 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D ARUE_c23060 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c29470 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c01180 putative NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c28320 rfbD; putative UDP-galactopyranose mutase RfbD K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D ARUE_c22510 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ARUE_c12410 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D ARUE_c07870 manB; phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c13150 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c11840 manC; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ARUE_c33120 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ARUE_c33130 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ARUE_c22920 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:arr00620] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c35260 aceE3; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c25880 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c20450 aceE1; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c16590 dltA; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c27820 putative zinc-type alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c21940 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c19610 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D ARUE_c19560 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ARUE_c17470 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D ARUE_c00510 bccA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c13260 bccA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c10710 acyP; acylphosphatase AcyP K01512 acyP; acylphosphatase [EC:3.6.1.7] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c32130 putative acetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D ARUE_c34600 lldD; putative L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D ARUE_c03300 ydaP; putative thiamine pyrophosphate-containingprotein YdaP K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D ARUE_c21630 poxB; pyruvate dehydrogenase PoxB K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D ARUE_c18410 D-lactate dehydrogenase K18930 dld; D-lactate dehydrogenase D ARUE_c04050 metallo-beta-lactamase domain containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ARUE_232p00240 metallo-beta-lactamase domain and rhodanese domain (RHOD) containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ARUE_c32230 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D ARUE_c39700 ytsJ; putative NAD-dependent malic enzyme 4 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ARUE_c35430 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ARUE_c15960 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D ARUE_c05390 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ARUE_c26750 mqo; putative malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D ARUE_c12360 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D ARUE_c07170 ppc; phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ARUE_c07830 pckG; phosphoenolpyruvate carboxykinase (GTP) PckG K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D ARUE_c20260 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ARUE_c35440 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ARUE_c06830 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c23800 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:arr00630] D ARUE_c06840 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c35440 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ARUE_c06830 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D ARUE_c05390 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ARUE_c29480 gltA2; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D ARUE_c16940 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c13340 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D ARUE_c00510 bccA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c13260 bccA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c08750 FAD/FMN-containing dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D ARUE_c32080 katA; catalase KatA K03781 katE; catalase [EC:1.11.1.6] D ARUE_c19980 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] D ARUE_c20790 gyaR; glyoxylate reductase GyaR K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D ARUE_c42790 putative glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D ARUE_c22380 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ARUE_c08380 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D ARUE_c36440 putative serine-pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c11630 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c41440 glyA3; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c39610 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c09380 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c41470 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c09390 gcvT1; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c41460 gcvT2; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c09400 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c15900 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c41450 gcvH3; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D ARUE_c36340 glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D ARUE_c17710 xylose isomerase domain protein TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D ARUE_c36320 putative hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D ARUE_c25780 putative beta-hydroxyacid dehydrogenase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D ARUE_c36330 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D ARUE_c00670 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c36350 glxK; glycerate kinase GlxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c42800 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c21200 ycsA; putative tartrate dehydrogenase/decarboxylase YcsA K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D ARUE_c42030 putative 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ARUE_c19750 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D ARUE_c27920 kgd; 2-oxoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D ARUE_113p00090 meqF; N-acetylanthranilate amidase MeqF K01432 AFMID; arylformamidase [EC:3.5.1.9] D ARUE_c39670 purU3; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ARUE_c04540 purU1; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ARUE_c11620 purU2; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:arr00640] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c19610 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D ARUE_c19560 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ARUE_c40360 pdhA4; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c33000 pdhA3; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14350 pdhA1; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c26930 pdhA2; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14360 pdhB1; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c26940 pdhB2; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c40350 pdhB4; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32990 pdhB3; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32980 pdhC2; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c14370 pdhC1; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c40340 pdhC3; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c22940 acyl-coenzyme A dehydrogenase/oxidase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c00510 bccA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c13260 bccA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c21120 putative 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c36090 putative aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ARUE_c13340 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D ARUE_c09980 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ARUE_c09990 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ARUE_c04690 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c20730 iolA1; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c21330 iolA2; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c15700 gltA1; citrate synthase GltA K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D ARUE_c15720 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D ARUE_c15710 prpB; putative methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:arr00650] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c10570 putative 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c33960 hbd; putative 3-hydroxybutyryl-CoA dehydrogenase Hbd K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c18780 crt1; 3-hydroxybutyryl-CoA dehydratase Crt K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c33970 crt2; 3-hydroxybutyryl-CoA dehydratase Crt K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c21200 ycsA; putative tartrate dehydrogenase/decarboxylase YcsA K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D ARUE_c05370 putative FAD-dependent oxidoreductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11810 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11800 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ARUE_c11830 sdhC; succinate:quinone oxidoreductase C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ARUE_c11820 sdhD; succinate dehydrogenase, membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ARUE_c41120 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D ARUE_c21120 putative 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c18110 putative succinate-semialdehyde dehydrogenase SsdA [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c08110 gabD2; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c06180 gabD1; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c12680 gabD3; succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c21110 gabD4; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c42780 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ARUE_c14440 scoA2; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ARUE_c04410 scoA1; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ARUE_c14450 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ARUE_c04400 lpsJ; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ARUE_c03640 bdhA; D-beta-hydroxybutyrate dehydrogenase BdhA K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D ARUE_c19530 adh2; alcohol dehydrogenase Adh K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-] D ARUE_c26640 ilvB2; acetolactate synthase IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c20650 putative acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c10140 ilvB1; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c26630 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ARUE_c37110 putative zinc-type alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] D ARUE_c08290 xecD; 2-(R)-hydroxypropyl-CoM dehydrogenase XecD K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:arr00660] D ARUE_c26640 ilvB2; acetolactate synthase IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c20650 putative acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c10140 ilvB1; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c26630 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ARUE_c09980 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D ARUE_c09990 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D ARUE_c40530 putative demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D ARUE_c26410 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ARUE_c26400 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ARUE_c26530 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:arr00562] D ARUE_c31850 plcN; Non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D ARUE_c13500 suhB; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ARUE_c09940 putative extragenic suppressor protein (inositolmonophosphatase family) K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ARUE_c30440 hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D ARUE_c18170 idhA; inositol 2-dehydrogenase IdhA K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21350 iolG1; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21440 iolG2; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21460 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21470 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c17840 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21340 iolE; inosose dehydratase IolE K03335 iolE; inosose dehydratase [EC:4.2.1.44] D ARUE_c18100 thiamine pyrophosphate-binding protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D ARUE_c21320 thiamine pyrophosphate binding protein, IolD family K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22] D ARUE_c21480 iolB; 5-keto-4-deoxyuronate isomerase family protein/myo-inositol catabolism protein IolB K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30] D ARUE_c21300 iolC; 5-dehydro-2-deoxygluconokinase IolC K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92] D ARUE_c04690 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c20730 iolA1; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c21330 iolA2; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c22470 tpiA3; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:arr00190] D ARUE_c09040 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D ARUE_c12040 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D ARUE_c05370 putative FAD-dependent oxidoreductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11810 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D ARUE_c11800 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D ARUE_c11830 sdhC; succinate:quinone oxidoreductase C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D ARUE_c11820 sdhD; succinate dehydrogenase, membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit D ARUE_c23640 qcrA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D ARUE_c23650 qcrB; ubiquinol-cytochrome c reductase, cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D ARUE_c23630 qcrC; putative ubiquinol-cytochrome c reductase,cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D ARUE_c22540 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D ARUE_c23680 putative integral membrane protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D ARUE_c23620 ctaE; putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D ARUE_c23690 ctaD; putative cytochrome c oxidase subunit 1-alpha K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D ARUE_c23700 ctaC; putative cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D ARUE_c22560 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ARUE_c16720 putative cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ARUE_c16730 putative cytochrome d ubiquinol oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ARUE_c27520 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ARUE_c27500 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ARUE_c27510 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ARUE_c27530 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ARUE_c27490 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ARUE_c27560 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ARUE_c27540 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ARUE_c27550 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ARUE_c01280 ppa; inorganic pyrophosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D ARUE_c31350 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ARUE_c42140 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:arr00680] D ARUE_c04490 putative aldehyde-dismutating formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D ARUE_c20010 fdhA; glutathione-independent formaldehyde dehydrogenase FdhA K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D ARUE_c11630 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c41440 glyA3; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c39610 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c36440 putative serine-pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ARUE_c07170 ppc; phosphoenolpyruvate carboxylase Ppc K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D ARUE_c05390 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ARUE_232p01280 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c13840 fba2; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c05240 fba1; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D ARUE_c12390 ywjI; uncharacterized protein YwjI K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D ARUE_c31240 pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D ARUE_c04630 rmpB; 3-hexulose-6-phosphate isomerase RmpB K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D ARUE_c04640 rmpA; 3-hexulose-6-phosphate synthase RmpA K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43] D ARUE_c06130 fae-hps: bifunctional enzyme fae/hps K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147] D ARUE_c19610 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] D ARUE_c19560 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c20260 ppsA; phosphoenolpyruvate synthase PpsA K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D ARUE_c08450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D ARUE_c26610 serA3; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c18040 serA2; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c09680 serC; putative phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ARUE_c22800 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:arr00910] D ARUE_c13240 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D ARUE_c13230 nasC; assimilatory nitrate reductase catalytic subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D ARUE_c13220 nasD1; nitrite reductase [NAD(P)H] K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-] D ARUE_c34030 nasD2; nitrite reductase [NAD(P)H] K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D ARUE_c34020 nitrite reductase [NAD(P)H], small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D ARUE_c13130 nirB; nitrite reductase [NAD(P)H] large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D ARUE_c13140 nirD; nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D ARUE_c29780 putative nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D ARUE_c20300 nitA; aliphatic nitrilase NitA K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D ARUE_c03750 gdhB1; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c28390 gdhB2; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c34610 gdh; NADP-specific glutamate dehydrogenase Gdh K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c17450 glutamate synthase [NADPH/NADH], alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ARUE_c17460 glutamate synthase [NADPH/NADH], beta subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ARUE_c12370 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D ARUE_c35580 icfA; carbonic anhydrase IcfA K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:arr00920] D ARUE_c13560 putative ABC-type sulfonate transport system K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_232p01220 putative binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c32360 putative ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c13550 ssuC1; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D ARUE_232p01200 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c32340 putative nitrate/sulfonate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c13540 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_232p01210 putative ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c32350 putative nitrate/sulfonate ABC transporter, ATP binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c42730 msuE; FMN reductase MsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] D ARUE_c32380 cysNC; bifunctional enzyme cysN/cysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ARUE_c32390 mmcV; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ARUE_c32400 cysH; phosphoadenosine phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D ARUE_c32410 sir2; sulfite reductase [ferredoxin] 2 K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D ARUE_c21570 putative NAD(FAD)-dependent dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D ARUE_c07730 sseA1; putative 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c27830 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c17120 sseA2; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c25720 nifP; putative serine acetyltransferase NifP K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ARUE_c27840 putative pyridoxal-phosphate dependent protein F13B12.4 K01738 cysK; cysteine synthase [EC:2.5.1.47] D ARUE_c25710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D ARUE_c13900 metX; homoserine O-acetyltransferase MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D ARUE_c31860 metB2; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c08420 metB1; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c37990 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:arr00061] D ARUE_c00510 bccA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c13260 bccA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c24870 putative acyl carrier protein K02078 acpP; acyl carrier protein D ARUE_c25920 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D ARUE_c24850 putative [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c25900 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c35100 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ARUE_c25910 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ARUE_c17970 kasA1; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c25930 kasA2; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c24860 fabG6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22760 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22970 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c10310 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c24880 fabZ; putative beta-hydroxyacyl-[acyl-carrier-protein]dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ARUE_c15970 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c12650 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:arr00071] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c22940 acyl-coenzyme A dehydrogenase/oxidase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D ARUE_c31770 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c14160 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c09150 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04810 acyl-coenzyme A oxidase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c15970 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c12650 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c28650 putative ferredoxin reductase / NAD(FAD)-dependent dehydrogenase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ARUE_c18900 putative NAD(FAD) dependent dehydrogenase, ferredoxin reductase-like protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ARUE_c12980 pyridine nucleotide-disulfide oxidoreductase domain protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:arr00561] D ARUE_c00670 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c36350 glxK; glycerate kinase GlxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c42800 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c27820 putative zinc-type alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c21940 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D ARUE_c01680 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D ARUE_c01690 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D ARUE_c01700 hPr1; dihydroxyacetone kinase, phosphotransfer subunit/phosphocarrier protein HPr K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D ARUE_c24020 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D ARUE_c15600 putative haloacid dehalogenase-like hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D ARUE_c22390 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c15850 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c16020 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c26380 1-acylglycerol-3-phosphate O-acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c28690 dagK; diacylglycerol kinase DagK K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ARUE_c14130 putative glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D ARUE_c20330 polysaccharide biosynthesis protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D ARUE_c35000 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:arr00564] D ARUE_c26370 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D ARUE_c24040 glpD1; glycerol-3-phosphate dehydrogenase GlpD K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D ARUE_c30140 glpD2; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D ARUE_c22390 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c15850 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c16020 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c26380 1-acylglycerol-3-phosphate O-acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c28690 dagK; diacylglycerol kinase DagK K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D ARUE_c31850 plcN; Non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D ARUE_c03420 glpQ; putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D ARUE_c00640 putative phosphodiesterase, GDPD family K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D ARUE_c14210 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D ARUE_c24620 pgsA3; CDP-diacylglycerol--inositol 3-phosphatidyltransferase PgsA K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D ARUE_c15010 pgsA2; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D ARUE_c37890 putative cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D ARUE_c41300 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D ARUE_c14110 pgsA1; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase PgsA K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D ARUE_c31850 plcN; Non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] C 00600 Sphingolipid metabolism [PATH:arr00600] D ARUE_c31820 lacZ; beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D ARUE_c16440 arylsulfatase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1] D ARUE_c36650 nedA2; sialidase NedA K01186 NEU1; sialidase-1 [EC:3.2.1.18] D ARUE_c06020 nedA1; sialidase NedA K01186 NEU1; sialidase-1 [EC:3.2.1.18] D ARUE_c35000 rafA; alpha-galactosidase RafA K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22] D ARUE_c08810 hex; beta-N-acetylhexosaminidase Hex K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c42340 nahA; beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:arr00592] D ARUE_c22940 acyl-coenzyme A dehydrogenase/oxidase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:arr01040] D ARUE_c33260 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D ARUE_c33270 putative ferredoxin reductase / flavodoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D ARUE_c22940 acyl-coenzyme A dehydrogenase/oxidase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D ARUE_c27930 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ARUE_c29530 putative lipase/esterase, SGNH-hydrolase superfamily K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ARUE_c25500 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_c41740 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_113p00210 putative acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_c40440 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:arr00230] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c12810 prs; ribose-phosphate pyrophosphokinase Prs K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D ARUE_c36510 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ARUE_c35190 purD; phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D ARUE_c11270 ade; trifunctional purine biosynthetic protein adenosine K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ARUE_c05960 purL; phosphoribosylformylglycinamidine synthase2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D ARUE_c05980 purS; phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D ARUE_c05970 purQ; phosphoribosylformylglycinamidine synthase1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ARUE_c36520 purM; phosphoribosylformylglycinamidine cyclo-ligase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D ARUE_c12440 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D ARUE_c12430 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D ARUE_c35180 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D ARUE_c40410 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ARUE_c11320 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ARUE_c07940 yhcR; endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c05200 nagD; protein NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c13180 punA; purine nucleoside phosphorylase PunA K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D ARUE_c19100 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ARUE_c16250 UPF0124 protein in ftsZ 3'region K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ARUE_c37820 putative nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D ARUE_c01320 hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D ARUE_c30180 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ARUE_c30200 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ARUE_c25260 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ARUE_c27240 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D ARUE_c35540 putative glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ARUE_c30100 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ARUE_c14750 guaD1; guanine deaminase GuaD K01487 guaD; guanine deaminase [EC:3.5.4.3] D ARUE_c35340 guaD2; guanine deaminase GuaD K01487 guaD; guanine deaminase [EC:3.5.4.3] D ARUE_c24170 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8] D ARUE_c24940 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ARUE_c24930 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ARUE_c14020 dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein Dgt K01129 dgt; dGTPase [EC:3.1.5.1] D ARUE_c24480 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ARUE_c34690 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ARUE_c12020 aroB1; bifunctional 3-dehydroquinate synthase/phosphatase AroB K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D ARUE_c00560 putative RelA / SpoT family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5] D ARUE_c13380 cya; adenylate cyclase Cya K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D ARUE_c05310 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ARUE_c11970 add2; putative adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D ARUE_c10690 add1; putative adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D ARUE_c30770 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c35630 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_113p00150 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c19270 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ARUE_c06410 putative metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D ARUE_c24630 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D ARUE_c32380 cysNC; bifunctional enzyme cysN/cysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ARUE_c32390 mmcV; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ARUE_c35390 uox; urate oxidase Uox K00365 uaZ; urate oxidase [EC:1.7.3.3] D ARUE_c36490 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D ARUE_c36480 putative OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D ARUE_c35240 hyuE; hydantoin racemase HyuE K16841 hpxA; allantoin racemase [EC:5.1.99.3] D ARUE_c36360 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5] D ARUE_c35460 ylbA; uncharacterized protein YlbA K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26] D ARUE_c02100 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ARUE_c02090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D ARUE_c02080 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:arr00240] D ARUE_c24200 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ARUE_c24210 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ARUE_c24240 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ARUE_c24230 pyrC; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3] D ARUE_c23740 pyrD; dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D ARUE_c05060 pyrE; orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D ARUE_c24190 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D ARUE_c14190 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22] D ARUE_c25260 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ARUE_c13270 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D ARUE_c15650 pyrG; CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2] D ARUE_c15840 cmk; cytidylate kinase Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D ARUE_c07940 yhcR; endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c05200 nagD; protein NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c37820 putative nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D ARUE_c19100 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D ARUE_c07460 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D ARUE_c24250 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D ARUE_c11930 cdd; cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5] D ARUE_c10620 fCA; cytosine deaminase FCA K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ARUE_c38200 dcd; deoxycytidine triphosphate deaminase Dcd K01494 dcd; dCTP deaminase [EC:3.5.4.13] D ARUE_c24940 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ARUE_c24930 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D ARUE_c35940 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D ARUE_c08410 tmk; thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9] D ARUE_c16860 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ARUE_c11940 deoA; thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D ARUE_c16820 tdk; thymidine kinase Tdk K00857 tdk; thymidine kinase [EC:2.7.1.21] D ARUE_c31400 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D ARUE_c39850 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ARUE_c00900 putative NAD(P)H:flavin oxidoreductase / NAD(P)H nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:arr00250] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c26880 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ARUE_c29670 aspC3; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c37520 aspC5; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c36440 putative serine-pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ARUE_c40120 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ARUE_c39280 aspA2; aspartate ammonia-lyase AspA K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D ARUE_c05410 aspA1; aspartate ammonia-lyase AspA K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D ARUE_c15480 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ARUE_c15490 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ARUE_c05310 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D ARUE_c40410 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D ARUE_c24240 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D ARUE_c41120 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D ARUE_c21120 putative 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c18110 putative succinate-semialdehyde dehydrogenase SsdA [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c08110 gabD2; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c06180 gabD1; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c12680 gabD3; succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c21110 gabD4; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c17450 glutamate synthase [NADPH/NADH], alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ARUE_c17460 glutamate synthase [NADPH/NADH], beta subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D ARUE_c03750 gdhB1; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c28390 gdhB2; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c34610 gdh; NADP-specific glutamate dehydrogenase Gdh K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ARUE_c06350 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c24200 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D ARUE_c24210 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D ARUE_c03330 glsA1; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c32270 glsA2; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c05970 purQ; phosphoribosylformylglycinamidine synthase1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ARUE_c30510 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ARUE_c36510 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:arr00260] D ARUE_c06250 ask; aspartokinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4] D ARUE_c31430 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ARUE_c27680 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ARUE_c27660 thrB; homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39] D ARUE_c27670 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D ARUE_c17040 ltaE; Low specificity L-threonine aldolase LtaE K01620 ltaE; threonine aldolase [EC:4.1.2.48] D ARUE_c20470 putative L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D ARUE_c11630 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c41440 glyA3; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c39610 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c36440 putative serine-pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ARUE_c00670 garK; glycerate kinase 2 K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c36350 glxK; glycerate kinase GlxK K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c42800 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D ARUE_c08450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D ARUE_c26610 serA3; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c18040 serA2; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c09680 serC; putative phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ARUE_c22800 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D ARUE_c13770 kbl; 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D ARUE_c13760 tdh1; L-threonine 3-dehydrogenase Tdh K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D ARUE_c20350 tdh2; L-threonine 3-dehydrogenase Tdh K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D ARUE_c37570 Cu2+-containing primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c05480 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c09380 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c41470 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c09390 gcvT1; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c41460 gcvT2; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c09400 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c15900 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c41450 gcvH3; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D ARUE_c39580 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D ARUE_c04830 choline oxidase K17755 codA; choline oxidase [EC:1.1.3.17] D ARUE_c04840 gbsA; betaine aldehyde dehydrogenase GbsA K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D ARUE_c07600 putative gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D ARUE_c32190 gamma-aminobutyraldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D ARUE_c04600 oxygenase component of putative two-component ring-hydroxylating dioxygenase K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251] D ARUE_c04610 FeS- and FAD-containing reductase component of two-component dioxygenase system K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251] D ARUE_c04530 N,N-dimethylglycine oxidase K00309 dmg; dimethylglycine oxidase [EC:1.5.3.10] D ARUE_c21130 soxA2; putative monomeric sarcosine oxidase SoxA K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D ARUE_c11380 soxA1; putative monomeric sarcosine oxidase SoxA K00301 E1.5.3.1; sarcosine oxidase [EC:1.5.3.1] D ARUE_c39640 soxA4; sarcosine oxidase subunit alpha K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1] D ARUE_c39620 soxB; sarcosine oxidase subunit beta K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1] D ARUE_c39650 soxG; sarcosine oxidase subunit gamma K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1] D ARUE_c39630 soxD; sarcosine oxidase subunit delta K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1] D ARUE_c31870 cbs1; putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D ARUE_c37930 cbs2; putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D ARUE_c39660 sdaA3; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c09420 sdaA1; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c19650 sdaA2; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c41430 sdaA4; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c38580 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ARUE_c12190 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ARUE_c17430 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ARUE_c17420 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ARUE_c02640 rhbB; L-2,4-diaminobutyrate decarboxylase RhbB K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:arr00270] D ARUE_c25720 nifP; putative serine acetyltransferase NifP K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ARUE_c27840 putative pyridoxal-phosphate dependent protein F13B12.4 K01738 cysK; cysteine synthase [EC:2.5.1.47] D ARUE_c25710 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D ARUE_c31870 cbs1; putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D ARUE_c37930 cbs2; putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D ARUE_c32370 homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D ARUE_c19910 metE; putative methylcobalamin:homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ARUE_c24140 metK; S-adenosylmethionine synthase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ARUE_c16250 UPF0124 protein in ftsZ 3'region K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D ARUE_c12530 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ARUE_c06250 ask; aspartokinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4] D ARUE_c31430 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ARUE_c27680 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ARUE_c13900 metX; homoserine O-acetyltransferase MetX K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D ARUE_c31860 metB2; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c08420 metB1; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c13890 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D ARUE_c37990 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D ARUE_c26520 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c07730 sseA1; putative 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c27830 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c17120 sseA2; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c05390 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D ARUE_c39660 sdaA3; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c09420 sdaA1; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c19650 sdaA2; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c41430 sdaA4; L-serine dehydratase SdaA K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D ARUE_c26610 serA3; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c18040 serA2; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c09680 serC; putative phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:arr00280] D ARUE_c26520 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ARUE_c40360 pdhA4; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c33000 pdhA3; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14350 pdhA1; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c26930 pdhA2; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14360 pdhB1; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c26940 pdhB2; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c40350 pdhB4; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32990 pdhB3; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32980 pdhC2; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c14370 pdhC1; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c40340 pdhC3; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c14430 putative acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ARUE_c13340 pccB; propionyl-CoA carboxylase beta chain K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D ARUE_c00510 bccA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c13260 bccA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D ARUE_c02530 putative oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ARUE_c06160 mmsB2; 3-hydroxyisobutyrate dehydrogenase MmsB K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ARUE_c04710 mmsB1; putative 3-hydroxyisobutyrate dehydrogenase MmsB K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ARUE_c19190 hypothetical protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D ARUE_c04690 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c20730 iolA1; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c21330 iolA2; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c36090 putative aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c14420 accA; acetyl-/propionyl-coenzyme A carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D ARUE_c14410 mccb; methylcrotonoyl-CoA carboxylase beta chain K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D ARUE_c42780 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ARUE_c14440 scoA2; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ARUE_c04410 scoA1; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D ARUE_c14450 scoB; putative succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ARUE_c04400 lpsJ; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:arr00290] D ARUE_c38580 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ARUE_c12190 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D ARUE_c26410 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D ARUE_c26400 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D ARUE_c26530 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D ARUE_c26640 ilvB2; acetolactate synthase IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c20650 putative acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c10140 ilvB1; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c26630 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ARUE_c26620 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ARUE_c26650 ilvD4; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ARUE_c03290 ilvD1; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ARUE_c26520 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ARUE_c29670 aspC3; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c37520 aspC5; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c23800 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:arr00300] D ARUE_c27680 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D ARUE_c06250 ask; aspartokinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4] D ARUE_c31430 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ARUE_c07760 dapA1; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c14980 dapA2; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c41050 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c10320 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c14940 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D ARUE_c29430 putative tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D ARUE_c15450 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ARUE_c26290 putative aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D ARUE_c29420 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ARUE_c15100 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ARUE_c27690 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ARUE_c40280 putative aminotransferase, aspartate aminotransferase family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] D ARUE_c16160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ARUE_c16170 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:arr00310] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c31770 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c14160 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c09150 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04810 acyl-coenzyme A oxidase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c11570 iaaM; tryptophan 2-monooxygenase IaaM K00468 davB; lysine 2-monooxygenase [EC:1.13.12.2] D ARUE_c41510 putative gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c18110 putative succinate-semialdehyde dehydrogenase SsdA [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c08110 gabD2; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c06180 gabD1; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c12680 gabD3; succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c21110 gabD4; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c09200 L-2-hydroxyglutarate dehydrogenase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:arr00220] D ARUE_c15460 argF; ornithine carbamoyltransferase ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D ARUE_c15480 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ARUE_c15490 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ARUE_c01810 putative urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] D ARUE_c01800 putative allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D ARUE_c02100 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ARUE_c02090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D ARUE_c02080 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D ARUE_c03330 glsA1; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c32270 glsA2; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c05970 purQ; phosphoribosylformylglycinamidine synthase1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c03750 gdhB1; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c28390 gdhB2; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c34610 gdh; NADP-specific glutamate dehydrogenase Gdh K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c29670 aspC3; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c37520 aspC5; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c01650 acetyltransferase, GNAT family protein K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D ARUE_c15430 argJ; glutamate N-acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D ARUE_c24420 acetyltransferase, GNAT family protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D ARUE_c15440 argB; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D ARUE_c15420 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D ARUE_c15450 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:arr00330] D ARUE_c10620 fCA; cytosine deaminase FCA K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D ARUE_232p01680 hyuA; N-methylhydantoinase A / oxoprolinase HyuA K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D ARUE_c18070 hyuA; hydantoin utilization protein A K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14] D ARUE_232p01690 hyuB; N-methylhydantoinase B/oxoprolinase HyuB K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D ARUE_c18080 hypothetical protein K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14] D ARUE_c39580 creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3] D ARUE_c39190 putative arginase family protein K01480 speB; agmatinase [EC:3.5.3.11] D ARUE_c37030 aguA; putative agmatine deiminase AguA K10536 aguA; agmatine deiminase [EC:3.5.3.12] D ARUE_c09260 aguA: putative agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12] D ARUE_c00400 puo; putrescine oxidase Puo K03343 puo; putrescine oxidase [EC:1.4.3.10] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c41510 putative gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D ARUE_c10130 gbh1; guanidinobutyrase Gbh K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D ARUE_c41490 gbh2; guanidinobutyrase Gbh K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D ARUE_c08050 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c00960 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c37020 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c05500 NAD(P)-dependent aldehyde dehydrogenase, PuuC-like protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D ARUE_c06150 NAD(P)-dependent aldehyde dehydrogenase, PuuC-like protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D ARUE_c34660 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D ARUE_c06350 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ARUE_c25190 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ARUE_c25180 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_232p01430 hypothetical protein K01777 prdF; proline racemase [EC:5.1.1.4] D ARUE_232p01320 hypothetical protein K01777 prdF; proline racemase [EC:5.1.1.4] C 00340 Histidine metabolism [PATH:arr00340] D ARUE_c17340 hisG; ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D ARUE_c17330 hisE; phosphoribosyl-ATP pyrophosphatase HisE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D ARUE_c17370 hisI; phosphoribosyl-AMP cyclohydrolase HisI K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D ARUE_c15190 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D ARUE_c15180 type 1 glutamine amidotransferase domain-containing protein K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D ARUE_c17350 hisF; imidazole glycerol phosphate synthase, cyclase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D ARUE_c15170 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c28020 hypothetical protein K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D ARUE_c16350 hisD; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D ARUE_c39780 hutH3; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D ARUE_c03720 hutH1; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D ARUE_c37940 hutH2; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D ARUE_c39790 hutU2; urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49] D ARUE_c03710 hutU1; urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49] D ARUE_c13790 hutI; imidazolonepropionase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:arr00350] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c37570 Cu2+-containing primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c05480 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c05860 hpaB; putative 4-hydroxyphenylacetate 3-monooxygenase oxygenase component HpaB K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D ARUE_c40600 hpcC; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase HpcC K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60] D ARUE_c40620 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase HpaG K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-] D ARUE_c40580 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase HpcG K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-] D ARUE_c40570 hpcH; 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase HpcH K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D ARUE_c18110 putative succinate-semialdehyde dehydrogenase SsdA [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c08110 gabD2; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c06180 gabD1; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c12680 gabD3; succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c21110 gabD4; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c15500 hypothetical protein K16163 K16163; maleylpyruvate isomerase [EC:5.2.1.4] D ARUE_c41760 fumarylacetoacetate hydrolase superfamily protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] D ARUE_113p00190 putative fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism [PATH:arr00360] D ARUE_c37570 Cu2+-containing primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c05480 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c33810 paaK; phenylacetate-coenzyme A ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D ARUE_c33800 paaI; phenylacetic acid degradation protein, thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D ARUE_c33640 paaA; ring 1,2-phenylacetyl-CoA epoxidase component K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D ARUE_c33630 paaB; ring 1,2-phenylacetyl-CoA epoxidase component K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D ARUE_c33620 paaC; ring 1,2-phenylacetyl-CoA epoxidase component K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D ARUE_c33610 paaD; ring 1,2-phenylacetyl-CoA epoxidase component K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D ARUE_c33600 paaE; ring 1,2-phenylacetyl-CoA epoxidase component K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D ARUE_c33830 maoC; protein MaoC K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c10570 putative 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c33960 hbd; putative 3-hydroxybutyryl-CoA dehydrogenase Hbd K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c08050 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c00960 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c37020 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c22620 Rieske-type ferredoxin component of a three-component non-heme iron oxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D ARUE_c28650 putative ferredoxin reductase / NAD(FAD)-dependent dehydrogenase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ARUE_c18900 putative NAD(FAD) dependent dehydrogenase, ferredoxin reductase-like protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D ARUE_c12980 pyridine nucleotide-disulfide oxidoreductase domain protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] C 00380 Tryptophan metabolism [PATH:arr00380] D ARUE_c22130 kynA; tryptophan 2,3-dioxygenase KynA K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D ARUE_113p00090 meqF; N-acetylanthranilate amidase MeqF K01432 AFMID; arylformamidase [EC:3.5.1.9] D ARUE_c22120 kynU; kynureninase KynU K01556 KYNU; kynureninase [EC:3.7.1.3] D ARUE_c17900 metal-dependent hydrolase, TIM barrel fold protein K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c31770 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c14160 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c09150 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04810 acyl-coenzyme A oxidase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c20300 nitA; aliphatic nitrilase NitA K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D ARUE_c08050 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c00960 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c37020 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c32080 katA; catalase KatA K03781 katE; catalase [EC:1.11.1.6] D ARUE_c19980 katE; catalase HPII K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:arr00400] D ARUE_c34380 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ARUE_c16030 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ARUE_c24300 aroB2; 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D ARUE_c35010 aroQ; 3-dehydroquinate dehydratase AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D ARUE_c41880 hpd; 4-hydroxyphenylpyruvate dioxygenase Hpd K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D ARUE_c41890 aroE2; shikimate dehydrogenase AroE K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24] D ARUE_c24310 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D ARUE_c28000 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D ARUE_c24320 aroC; chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5] D ARUE_c17380 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ARUE_c23610 trpD; anthranilate phosphoribosyltransferase TrpD K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D ARUE_c36680 trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D ARUE_c15190 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D ARUE_c17410 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D ARUE_c17430 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D ARUE_c17420 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D ARUE_c28590 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5] D ARUE_c15830 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D ARUE_c37610 arogenate dehydratase/prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D ARUE_c00990 pheA; prephenate dehydratase PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:arr00410] D ARUE_c38530 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D ARUE_c41120 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D ARUE_c21120 putative 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c20710 putative aminotransferase, acetyl-ornithine aminotransferase family K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D ARUE_c37570 Cu2+-containing primary amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c05480 Cu2+-containing amine oxidase K00276 AOC3; primary-amine oxidase [EC:1.4.3.21] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c41510 putative gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D ARUE_c01440 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D ARUE_c39850 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ARUE_c36090 putative aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c22940 acyl-coenzyme A dehydrogenase/oxidase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D ARUE_c04690 mmsA; methylmalonate-semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c20730 iolA1; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D ARUE_c21330 iolA2; methylmalonate semialdehyde dehydrogenase IolA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:arr00430] D ARUE_c41120 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D ARUE_c36000 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ARUE_c40120 ald; alanine dehydrogenase Ald K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D ARUE_c20710 putative aminotransferase, acetyl-ornithine aminotransferase family K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55] D ARUE_c03750 gdhB1; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c28390 gdhB2; NAD-specific glutamate dehydrogenase GdhB K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D ARUE_c19560 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D ARUE_c19610 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:arr00450] D ARUE_c31860 metB2; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c08420 metB1; cystathionine gamma-synthase MetB K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D ARUE_c19910 metE; putative methylcobalamin:homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D ARUE_c12880 csd1; putative cysteine desulfurase Csd K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D ARUE_c37650 trxB1; putative thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ARUE_c20070 tRR; thioredoxin reductase TRR K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ARUE_c43260 trxB2; thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D ARUE_c35300 FeS- and molybdenum cofactor-binding subunit of putative xanthine dehydrogenase/xanthine oxidase K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D ARUE_c32380 cysNC; bifunctional enzyme cysN/cysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ARUE_c32390 mmcV; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ARUE_c26580 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:arr00460] D ARUE_c18440 bglX1; extracellular beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18700 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c20320 glycosyl hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c06220 cbg-1: beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18540 bglA3; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c30990 bglA4; beta-glucosidase BglA K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c00830 bglA1; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c20300 nitA; aliphatic nitrilase NitA K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D ARUE_c36000 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ARUE_c11630 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c41440 glyA3; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c39610 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:arr00470] D ARUE_c11550 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c30380 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c26360 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ARUE_c03330 glsA1; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c32270 glsA2; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c05970 purQ; phosphoribosylformylglycinamidine synthase1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D ARUE_c27270 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D ARUE_c16190 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ARUE_c15100 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D ARUE_c27690 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D ARUE_c13780 putative FAD dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6] D ARUE_c10130 gbh1; guanidinobutyrase Gbh K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D ARUE_c41490 gbh2; guanidinobutyrase Gbh K25365 gbh; guanidinobutyrase / D-arginase [EC:3.5.3.7 3.5.3.10] D ARUE_232p01430 hypothetical protein K01777 prdF; proline racemase [EC:5.1.1.4] D ARUE_232p01320 hypothetical protein K01777 prdF; proline racemase [EC:5.1.1.4] D ARUE_232p01410 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-] D ARUE_232p01530 dapA; dihydrodipicolinate synthase DapA K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22] D ARUE_232p01560 aldH; NADP-dependent fatty aldehyde dehydrogenase AldH K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26] C 00480 Glutathione metabolism [PATH:arr00480] D ARUE_c36000 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D ARUE_c03370 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D ARUE_c00480 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D ARUE_c40500 LamB/YcsF superfamily protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D ARUE_c02980 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D ARUE_c38010 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D ARUE_c30320 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D ARUE_c16610 pepA; putative cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ARUE_c22860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ARUE_c25440 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ARUE_c11370 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D ARUE_c00030 6-phosphogluconate dehydrogenase-like protein K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ARUE_c25740 yqjI; 6-phosphogluconate dehydrogenase YqjI K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D ARUE_c22500 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c26140 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c06400 gpx; glutathione peroxidase Gpx K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:arr00515] D ARUE_c12660 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:arr00514] D ARUE_c12660 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:arr00511] D ARUE_c36650 nedA2; sialidase NedA K01186 NEU1; sialidase-1 [EC:3.2.1.18] D ARUE_c06020 nedA1; sialidase NedA K01186 NEU1; sialidase-1 [EC:3.2.1.18] D ARUE_c31820 lacZ; beta-galactosidase LacZ K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D ARUE_c08810 hex; beta-N-acetylhexosaminidase Hex K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c42340 nahA; beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c09790 MAN2C1: alpha-mannosidase 2C1 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D ARUE_c39340 fuca; plasma alpha-L-fucosidase Fuca K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D ARUE_c05720 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:arr00540] D ARUE_c01130 gmhA; putative phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ARUE_c10510 SIS (sugar ISomerase) domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ARUE_c01140 hldE1; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ARUE_c01170 hldE2; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ARUE_c01090 putative haloacid dehalogenase-like hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] C 00542 O-Antigen repeat unit biosynthesis [PATH:arr00542] D ARUE_c27590 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:arr00541] D ARUE_c30050 yngB; putative UTP--glucose-1-phosphate uridylyltransferase YngB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D ARUE_c23060 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c29470 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c01180 putative NAD dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D ARUE_c28320 rfbD; putative UDP-galactopyranose mutase RfbD K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D ARUE_c33150 rkpK; UDP-glucose 6-dehydrogenase RkpK K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c11170 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D ARUE_c23210 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ARUE_c23200 rmlB; dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ARUE_c23190 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D ARUE_c12410 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D ARUE_c07870 manB; phosphomannomutase ManB K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c13150 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D ARUE_c11840 manC; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D ARUE_c33120 GDP-mannose 4,6 dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D ARUE_c33130 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D ARUE_c12800 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D ARUE_c04960 putative lipopolysaccharide biosynthesis protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D ARUE_c28350 putative acyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] C 00550 Peptidoglycan biosynthesis [PATH:arr00550] D ARUE_c38020 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c26390 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c31470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ARUE_c16220 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ARUE_c16190 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ARUE_c16160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ARUE_c26360 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ARUE_c16170 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ARUE_c23780 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ARUE_c23230 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ARUE_c16180 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ARUE_c16210 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ARUE_c16150 spoVD; stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ARUE_c00270 pbpA1; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D ARUE_c01290 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c24570 putative UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D ARUE_c24580 putative glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D ARUE_c09440 putative FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] C 00552 Teichoic acid biosynthesis [PATH:arr00552] D ARUE_c23230 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ARUE_c27590 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ARUE_c27610 putative glycosyl transferase, WecB/TagA/CpsF family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D ARUE_c33110 glycosyl transferase, WecG/TagA family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D ARUE_c12420 putative transcriptional attenuator domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D ARUE_c33670 lytR; transcriptional regulator LytR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-] D ARUE_c20330 polysaccharide biosynthesis protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D ARUE_c14130 putative glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:arr00543] D ARUE_c33090 putative serine O-acetyltransferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D ARUE_c27590 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ARUE_c07150 putative family 2 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D ARUE_c35730 glycosyl transferase domain, group 2 family protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D ARUE_c25720 nifP; putative serine acetyltransferase NifP K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D ARUE_c06330 putative acyltransferase K13663 gumF; acyltransferase [EC:2.3.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:arr00730] D ARUE_c26110 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D ARUE_c25230 thiED; multifunctional protein ThiED K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D ARUE_c26860 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c28660 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c29170 putative glycine/D-amino acid oxidase (ThiO-like) K03153 thiO; glycine oxidase [EC:1.4.3.19] D ARUE_c16950 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ARUE_c29150 thiG; thiazole synthase ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D ARUE_c29180 thiE; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D ARUE_c26340 thiL; thiamine-monophosphate kinase ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D ARUE_c29720 GTPase, YjeQ/EngC-like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ARUE_c28010 GTPase, YjeQ/EngC-like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ARUE_c30770 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c35630 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_113p00150 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c04760 tenA; protein TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:arr00740] D ARUE_c17310 ribBA2; riboflavin biosynthesis protein RibBA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ARUE_c17280 ribD4; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ARUE_c17300 ribBA1; riboflavin biosynthesis protein RibBA K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D ARUE_c17320 ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D ARUE_c17290 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D ARUE_c14800 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D ARUE_c42730 msuE; FMN reductase MsuE K00299 ssuE; FMN reductase [EC:1.5.1.38] C 00750 Vitamin B6 metabolism [PATH:arr00750] D ARUE_c06890 pdxK; pyridoxine kinase PdxK K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D ARUE_c09680 serC; putative phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D ARUE_c27670 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1] D ARUE_c24610 pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D ARUE_c04560 pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D ARUE_c24560 putative glutamine amidotransferase (GATase_I) involved in pyridoxine biosynthesis K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:arr00760] D ARUE_c26880 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D ARUE_c20700 nadX; putative L-aspartate dehydrogenase NadX K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21] D ARUE_c26890 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D ARUE_c26870 nadC; putative nicotinate-nucleotide pyrophosphorylase NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D ARUE_c27300 pncB1; nicotinate phosphoribosyltransferase PncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D ARUE_c13180 punA; purine nucleoside phosphorylase PunA K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D ARUE_c07940 yhcR; endonuclease YhcR K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c05200 nagD; protein NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D ARUE_c25160 nadD; putative nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D ARUE_c28900 nudC; NADH pyrophosphatase NudC K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D ARUE_c04900 nadE; NH(3)-dependent NAD(+) synthetase NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5] D ARUE_c15020 cinA; putative competence-damage inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D ARUE_c27310 pncA; pyrazinamidase/nicotinamidase PncA K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D ARUE_c15630 ppnK; putative inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D ARUE_c41590 NAD/NADP transhydrogenase alpha subunit-like protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D ARUE_c41600 pntAA; NAD(P) transhydrogenase subunit alpha part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D ARUE_c41580 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D ARUE_c18110 putative succinate-semialdehyde dehydrogenase SsdA [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c08110 gabD2; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c06180 gabD1; succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c12680 gabD3; succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c21110 gabD4; putative succinate-semialdehyde dehydrogenase [NAD(P)+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D ARUE_c35280 hypothetical protein K19190 nboR; nicotine blue oxidoreductase [EC:1.1.1.328] C 00770 Pantothenate and CoA biosynthesis [PATH:arr00770] D ARUE_c26640 ilvB2; acetolactate synthase IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c20650 putative acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c10140 ilvB1; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D ARUE_c26630 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D ARUE_c26620 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D ARUE_c26650 ilvD4; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ARUE_c03290 ilvD1; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D ARUE_c16410 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D ARUE_c08880 panE; 2-dehydropantoate 2-reductase PanE K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D ARUE_c01440 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D ARUE_c30520 coaA; pantothenate kinase CoaA K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D ARUE_c24150 coaBC; coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D ARUE_c26280 coaD; phosphopantetheine adenylyltransferase CoaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D ARUE_c22260 coaE; dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D ARUE_c30500 acpS; holo-[acyl-carrier-protein] synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D ARUE_c15370 4'-phosphopantetheinyl transferase family protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D ARUE_c26520 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ARUE_c39850 amaB; N-carbamoyl-L-amino acid hydrolase AmaB K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D ARUE_c38530 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:arr00780] D ARUE_c17970 kasA1; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c25930 kasA2; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c24860 fabG6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22760 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22970 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c10310 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c24880 fabZ; putative beta-hydroxyacyl-[acyl-carrier-protein]dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ARUE_c10420 putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ARUE_c10430 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ARUE_c10410 bioD; dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D ARUE_c10440 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D ARUE_c13360 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:arr00785] D ARUE_c16520 lipB; octanoyltransferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D ARUE_c41420 lipA; lipoyl synthase LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8] D ARUE_c16510 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D ARUE_c24750 hypothetical protein K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204] D ARUE_c22850 putative biotin/lipoate A/B protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c35260 aceE3; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c25880 aceE2; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c20450 aceE1; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D ARUE_c16590 dltA; dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D ARUE_c27920 kgd; 2-oxoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D ARUE_c40360 pdhA4; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c33000 pdhA3; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14350 pdhA1; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c26930 pdhA2; pyruvate dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D ARUE_c14360 pdhB1; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c26940 pdhB2; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c40350 pdhB4; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32990 pdhB3; pyruvate dehydrogenase E1 component subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D ARUE_c32980 pdhC2; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c14370 pdhC1; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c40340 pdhC3; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D ARUE_c09380 gcvP1; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c41470 gcvP2; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D ARUE_c09390 gcvT1; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c41460 gcvT2; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c09400 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c15900 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein D ARUE_c41450 gcvH3; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:arr00790] D ARUE_c01360 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D ARUE_c37500 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D ARUE_c01380 folB; dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D ARUE_c01390 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D ARUE_c01370 folP; dihydropteroate synthase FolP K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D ARUE_c31410 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D ARUE_c25280 fgs; folylpolyglutamate synthase Fgs K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D ARUE_c17310 ribBA2; riboflavin biosynthesis protein RibBA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ARUE_c00240 trpG; anthranilate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D ARUE_c37880 pab; para-aminobenzoate synthase Pab K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D ARUE_c37900 putative 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D ARUE_c07410 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D ARUE_c29140 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ARUE_c14860 moaA; putative molybdopterin cofactor synthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ARUE_113p00120 putative MoaA-like protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ARUE_c14910 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ARUE_c14930 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ARUE_113p00130 putative MoaE-like protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ARUE_c14900 moeA2; molybdenum cofactor synthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ARUE_c04480 moeA1; putative molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D ARUE_c09760 gphn; gephyrin K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:arr00670] D ARUE_c31410 folA; dihydrofolate reductase FolA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D ARUE_c30430 fhs; formate--tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D ARUE_c04510 folD1; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ARUE_c11640 folD2; bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D ARUE_c04520 putative methenyltetrahydrofolate cyclohydrolase or formimidoyltetrahydrofolate cyclodeaminase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9] D ARUE_c11630 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c41440 glyA3; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c39610 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D ARUE_c11270 ade; trifunctional purine biosynthetic protein adenosine K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D ARUE_c11320 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ARUE_c17240 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ARUE_c09390 gcvT1; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c41460 gcvT2; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D ARUE_c31400 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45] D ARUE_c39670 purU3; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ARUE_c04540 purU1; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ARUE_c11620 purU2; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D ARUE_c30060 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:arr00860] D ARUE_c26490 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c39450 putative glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c29090 hemA; glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D ARUE_c18050 hemL1; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ARUE_c29000 hemL2; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ARUE_c29020 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ARUE_c29040 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D ARUE_c29030 hemD2; uroporphyrinogen III synthase HemD K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D ARUE_c13110 bifunctional uroporphyrinogen-III synthase/response regulator domain protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D ARUE_c29080 hemE; uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D ARUE_c29070 hemG; protoporphyrinogen oxidase HemG K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D ARUE_c29050 hemH; ferrochelatase HemH K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D ARUE_c32250 cysG3; siroheme synthase 3 K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D ARUE_c13120 hemD1; porphyrin biosynthesis protein HemD K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D ARUE_c22540 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D ARUE_c22560 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ARUE_c29880 ferritin-like diiron-carboxylate protein K22336 bfrB; bacterioferritin B [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:arr00130] D ARUE_c32550 putative methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D ARUE_c32560 dhbC; isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D ARUE_c32600 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D ARUE_c32630 menC; o-succinylbenzoate synthase MenC K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D ARUE_c34140 menE2; O-succinylbenzoate-CoA ligase MenE K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D ARUE_c34130 menB; naphthoate synthase MenB K01661 menB; naphthoate synthase [EC:4.1.3.36] D ARUE_c34150 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:arr00900] D ARUE_c16950 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D ARUE_c14560 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D ARUE_c08510 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D ARUE_c12750 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D ARUE_c08520 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D ARUE_c14590 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D ARUE_c29620 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c03190 idi; isopentenyl-diphosphate delta-isomerase Idi K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D ARUE_c03180 putative geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ARUE_c16080 putative dimethylallyltransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ARUE_c12270 uppS1; undecaprenyl pyrophosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D ARUE_c23780 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:arr00906] D ARUE_c03170 crtB; phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:arr00907] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c13350 putative short chain dehydrogenase/reductase family protein K13775 atuG; citronellol/citronellal dehydrogenase D ARUE_c42780 yngG; hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D ARUE_c08130 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c08140 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c22530 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c37120 putative transketolase N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c37130 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c42580 putative transketolase subunit B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D ARUE_c42590 putative transketolase subunit A K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:arr00523] D ARUE_c23210 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ARUE_c23200 rmlB; dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ARUE_c23190 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D ARUE_c32560 dhbC; isochorismate synthase DhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D ARUE_c23200 rmlB; dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:arr00946] D ARUE_c18440 bglX1; extracellular beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18700 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c20320 glycosyl hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c06220 cbg-1: beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18540 bglA3; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c30990 bglA4; beta-glucosidase BglA K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c00830 bglA1; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c18450 putative rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] D ARUE_c18520 alpha-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D ARUE_c35390 uox; urate oxidase Uox K00365 uaZ; urate oxidase [EC:1.7.3.3] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:arr00311] D ARUE_c34390 cah; cephalosporin C deacetylase Cah K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D ARUE_c11690 hypothetical protein K19200 IAL; isopenicillin-N N-acyltransferase like protein D ARUE_c38040 putative penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:arr00332] D ARUE_c25190 proB; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D ARUE_c25180 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:arr00261] D ARUE_c32380 cysNC; bifunctional enzyme cysN/cysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D ARUE_c32390 mmcV; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D ARUE_c06250 ask; aspartokinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4] D ARUE_c31430 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D ARUE_c07760 dapA1; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c14980 dapA2; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c41050 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c10320 dihydrodipicolinate synthetase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D ARUE_c14940 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:arr00521] D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c00920 celB; phosphoglucomutase CelB K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D ARUE_c30440 hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D ARUE_c13500 suhB; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ARUE_c09940 putative extragenic suppressor protein (inositolmonophosphatase family) K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D ARUE_c18170 idhA; inositol 2-dehydrogenase IdhA K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21350 iolG1; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21440 iolG2; inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21460 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c21470 putative oxidoreductase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c17840 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369] D ARUE_c23210 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ARUE_c23200 rmlB; dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D ARUE_c23190 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase RfbC K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D ARUE_c13820 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c15980 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_232p01260 glk; glucokinase Glk K25026 glk; glucokinase [EC:2.7.1.2] D ARUE_c07750 putative transcriptional regulator/glucokinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:arr00525] D ARUE_c23210 rmlA; glucose-1-phosphate thymidylyltransferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D ARUE_c23200 rmlB; dTDP-glucose 4,6-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:arr00401] D ARUE_c15830 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D ARUE_c17380 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D ARUE_c24850 putative [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c25900 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c24860 fabG6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22760 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22970 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c10310 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D ARUE_c24870 putative acyl carrier protein K02078 acpP; acyl carrier protein D ARUE_c25920 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:arr00999] D ARUE_c24140 metK; S-adenosylmethionine synthase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D ARUE_c18440 bglX1; extracellular beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18700 bglB; thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c20320 glycosyl hydrolase family 3 protein K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c06220 cbg-1: beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D ARUE_c18540 bglA3; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c30990 bglA4; beta-glucosidase BglA K05350 bglB; beta-glucosidase [EC:3.2.1.21] D ARUE_c00830 bglA1; beta-glucosidase A K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D ARUE_c02650 putative lysine/ornithine N-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:arr00362] D ARUE_c41840 pcaD; 3-oxoadipate enol lactone hydrolase PcaD K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D ARUE_c41810 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D ARUE_c41800 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D ARUE_c17860 putative extradiol dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c26090 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c41860 pcaG; protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D ARUE_c41870 pcaH; protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D ARUE_c41850 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase PcaB K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D ARUE_c41830 pcaC; 4-carboxymuconolactone decarboxylase PcaC K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D ARUE_c40530 putative demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17] D ARUE_c41200 pobA; 4-hydroxybenzoate hydroxylase PobA K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D ARUE_c42620 putative short-chain type dehydrogenase/reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D ARUE_c31770 gcdH; glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c14160 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c09150 acyl-coenzyme A dehydrogenase/oxidase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04810 acyl-coenzyme A oxidase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c10570 putative 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c33960 hbd; putative 3-hydroxybutyryl-CoA dehydrogenase Hbd K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:arr00627] D ARUE_c08050 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c00960 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c37020 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c20300 nitA; aliphatic nitrilase NitA K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D ARUE_c10710 acyP; acylphosphatase AcyP K01512 acyP; acylphosphatase [EC:3.6.1.7] D ARUE_c21850 putative flavoprotein monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D ARUE_c41730 putative benzoate-/anthranilate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D ARUE_113p00220 anthranilate coenzyme A ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32] D ARUE_113p00230 putative 2-aminobenzoyl-coenzyme A monooxygenase/reductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D ARUE_c41720 putative 2-aminobenzoyl-CoA monooxygenase/reductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40] D ARUE_c24110 vanA; vanillate O-demethylase oxygenase component K03862 vanA; vanillate monooxygenase [EC:1.14.13.82] D ARUE_c24100 vanB-like reductase component (flavin-iron/sulfur protein) of oxygenase system K03863 vanB; vanillate monooxygenase ferredoxin subunit D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:arr00364] D ARUE_c24820 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:arr00625] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c18820 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D ARUE_c04490 putative aldehyde-dismutating formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D ARUE_c20010 fdhA; glutathione-independent formaldehyde dehydrogenase FdhA K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] D ARUE_c38820 alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D ARUE_c21170 putative L-2-haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:arr00361] D ARUE_c24820 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D ARUE_c17860 putative extradiol dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c26090 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c21170 putative L-2-haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D ARUE_c38820 alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:arr00623] D ARUE_c19020 putative enoyl-CoA hydratase/isomerase K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180] D ARUE_c21850 putative flavoprotein monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7] D ARUE_c24820 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:arr00622] D ARUE_c17860 putative extradiol dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c26090 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00633 Nitrotoluene degradation [PATH:arr00633] D ARUE_c10520 NAD(P)H:flavin oxidoreductase, OYE family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D ARUE_c17010 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:arr00643] D ARUE_c08050 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c00960 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c37020 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D ARUE_c20300 nitA; aliphatic nitrilase NitA K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D ARUE_c17860 putative extradiol dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D ARUE_c26090 putative ring-cleavage extradiol dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2] C 00791 Atrazine degradation [PATH:arr00791] D ARUE_c01800 putative allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D ARUE_c01810 putative urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] D ARUE_c02100 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D ARUE_c02090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D ARUE_c02080 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:arr00930] D ARUE_c05350 gnl; gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D ARUE_c34530 aldH; NADP-dependent fatty aldehyde dehydrogenase AldH K14519 aldH; NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4] D ARUE_c04720 echA; putative enoyl-CoA hydratase EchA K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D ARUE_c40930 nylB; 6-aminohexanoate-dimer hydrolase NylB K01453 nylB; 6-aminohexanoate-oligomer exohydrolase [EC:3.5.1.46] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:arr00626] D ARUE_c19430 adhA1; putative alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D ARUE_c32120 adhA2; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D ARUE_c41860 pcaG; protocatechuate 3,4-dioxygenase alpha chain K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D ARUE_c41870 pcaH; protocatechuate 3,4-dioxygenase beta chain K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:arr03020] D ARUE_c31060 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ARUE_c31050 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ARUE_c30680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ARUE_c24160 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D ARUE_c09620 rad25; putative DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:arr03010] D ARUE_c22240 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ARUE_c14170 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ARUE_c30910 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ARUE_c24390 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ARUE_c30810 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ARUE_c42950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ARUE_c31030 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ARUE_c30840 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ARUE_c30550 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ARUE_c30980 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ARUE_c30690 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ARUE_c31040 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ARUE_c30700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ARUE_c38870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ARUE_c14810 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ARUE_c26070 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ARUE_c30880 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ARUE_c42930 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ARUE_c30930 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ARUE_c23960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ARUE_c31130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ARUE_c30940 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ARUE_c30970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ARUE_c30960 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ARUE_c30850 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ARUE_c30830 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ARUE_c31090 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ARUE_c42920 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ARUE_c31100 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ARUE_c31140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ARUE_c30560 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ARUE_c30870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ARUE_c30790 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ARUE_c30900 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ARUE_c30670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ARUE_c30820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ARUE_c26030 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ARUE_c15250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ARUE_c25220 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ARUE_c30920 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ARUE_c30950 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ARUE_c30860 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ARUE_c12830 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ARUE_c25210 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ARUE_c38890 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ARUE_c30890 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ARUE_c30800 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ARUE_c22840 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D ARUE_c26260 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ARUE_c38880 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ARUE_c15240 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ARUE_c01460 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38810 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01500 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c15560 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c08640 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38860 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01470 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38800 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c08650 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c01510 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38850 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c15570 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c01480 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38790 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c15580 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38840 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c08660 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c01520 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:arr00970] D ARUE_c30010 trnA4; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c00090 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c25110 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c25130 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c09910 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c07820 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c25540 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c27740 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c14040 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ARUE_c14050 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ARUE_c03900 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ARUE_c03760 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ARUE_c17190 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ARUE_c26470 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ARUE_c12790 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ARUE_c03890 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ARUE_c26460 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ARUE_c38240 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c17170 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c17200 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c25410 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c25610 trnH; tRNA-His K14226 tRNA-His; tRNA His D ARUE_c00080 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ARUE_c12060 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c26730 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c00320 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c17490 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c22990 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c42970 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c01970 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c26690 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c26700 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c28830 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c31660 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c14140 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c28840 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c03910 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ARUE_c35160 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c15870 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c25400 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c07900 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c06320 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c07960 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c07390 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c08860 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c08370 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c31670 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c31170 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ARUE_c32010 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ARUE_c17180 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c17210 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c25840 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c26490 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c39450 putative glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c13660 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ARUE_c13670 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ARUE_c13650 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ARUE_c24360 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ARUE_c24430 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ARUE_c13970 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D ARUE_c24640 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ARUE_c01010 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ARUE_c08540 cysS1; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ARUE_c26580 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ARUE_c17240 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D ARUE_c25320 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ARUE_c24010 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ARUE_c25290 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ARUE_c01590 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ARUE_c27700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ARUE_c14650 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ARUE_c24440 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ARUE_c03090 pheS1; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15340 pheS2; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15350 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ARUE_c15540 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ARUE_c11730 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:arr03060] D ARUE_c30780 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ARUE_c31160 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D ARUE_c24500 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ARUE_c24490 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ARUE_c24510 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D ARUE_c43360 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D ARUE_c28450 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ARUE_c26130 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ARUE_c26180 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ARUE_c23390 tatA; twin-arginine translocation protein, TatA/E K03116 tatA; sec-independent protein translocase protein TatA D ARUE_c29310 putative twin-arginine translocation protein K03117 tatB; sec-independent protein translocase protein TatB D ARUE_c23400 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D ARUE_c26010 lepB1; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_c26020 lepB2; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_c33680 lepB3; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_232p00550 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_232p00720 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_c16300 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_c29990 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D ARUE_c41240 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:arr04122] D ARUE_c26860 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c28660 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c07730 sseA1; putative 3-mercaptopyruvate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c27830 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c17120 sseA2; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D ARUE_c28640 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ARUE_c14930 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ARUE_113p00130 putative MoaE-like protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D ARUE_c14860 moaA; putative molybdopterin cofactor synthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ARUE_113p00120 putative MoaA-like protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D ARUE_c41940 ThiS family protein K03636 moaD; sulfur-carrier protein D ARUE_c14850 moaD; putative molybdopterin cofactor synthesis protein MoaD K03636 moaD; sulfur-carrier protein D ARUE_c29100 MoeZ-like protein possibly involved in molybdopterin or thiamin biosynthesis K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D ARUE_c14910 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D ARUE_c29160 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:arr03050] D ARUE_c23290 arc; proteasome-associated ATPase Arc K13527 mpa; proteasome-associated ATPase D ARUE_c23330 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D ARUE_c23320 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:arr03018] D ARUE_c25240 rng; ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ARUE_c14820 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ARUE_c31690 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ARUE_c07880 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c09010 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c27650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D ARUE_c14990 ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D ARUE_c37220 dnaK2; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c20080 danK; chaperone protein Dank K04043 dnaK; molecular chaperone DnaK D ARUE_c34240 dnaK1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c09520 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30260 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c31350 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ARUE_c42140 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ARUE_c43220 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:arr03030] D ARUE_c28950 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_232p02020 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c27190 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c16320 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ARUE_c06300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ARUE_c08400 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ARUE_c23970 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ARUE_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ARUE_c42680 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ARUE_c14030 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c09530 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ARUE_c26000 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:arr03410] D ARUE_c34890 putative DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ARUE_c09480 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ARUE_c01770 putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ARUE_c15520 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D ARUE_c25330 mutM1; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ARUE_c26240 mutM2; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ARUE_c07330 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D ARUE_c25420 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D ARUE_c15510 ada; putative regulatory protein Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ARUE_c00170 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D ARUE_c04330 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ARUE_c11720 exoA; exodeoxyribonuclease ExoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:arr03420] D ARUE_c12940 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ARUE_c22370 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ARUE_c21640 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ARUE_c22270 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D ARUE_c22400 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D ARUE_c28890 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c28920 pcrA2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c09950 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ARUE_c09620 rad25; putative DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:arr03430] D ARUE_c28890 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c28920 pcrA2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c09950 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c29640 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ARUE_c29650 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c16320 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ARUE_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ARUE_c06300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ARUE_c23970 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ARUE_c08400 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ARUE_c28950 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_232p02020 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c27190 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:arr03440] D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D ARUE_c23790 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ARUE_c06290 recR; recombination protein RecR K06187 recR; recombination protein RecR D ARUE_c15060 recA; protein RecA K03553 recA; recombination protein RecA D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c24530 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ARUE_c24520 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ARUE_c24540 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ARUE_c26320 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ARUE_c16320 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ARUE_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ARUE_c06300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ARUE_c23970 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ARUE_c08400 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ARUE_c28950 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_232p02020 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c27190 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c24130 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:arr03450] D ARUE_c02820 putative DNA repair protein K10979 ku; DNA end-binding protein Ku D ARUE_c21610 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D ARUE_c02810 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:arr03250] D ARUE_c00130 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:arr02010] D ARUE_c13560 putative ABC-type sulfonate transport system K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_232p01220 putative binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c32360 putative ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c13550 ssuC1; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D ARUE_232p01200 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c32340 putative nitrate/sulfonate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c13540 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_232p01210 putative ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c32350 putative nitrate/sulfonate ABC transporter, ATP binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c36610 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ARUE_c36600 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D ARUE_c36590 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ARUE_c20500 extracellular solute-binding domain protein K02012 afuA; iron(III) transport system substrate-binding protein D ARUE_c07060 putative Fe(3+)-binding extracellular protein K02012 afuA; iron(III) transport system substrate-binding protein D ARUE_c20490 putative ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein D ARUE_c07050 putative Fe(3+)-transport system, permease protein K02011 afuB; iron(III) transport system permease protein D ARUE_c07040 putative Fe(3+) transport system, ATP binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ARUE_c20480 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ARUE_c39800 ABC transporter, substrate binding component K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c29680 proX; glycine betaine/choline-binding protein of an ABC-type transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c06120 osmF; putative osmoprotectant uptake system substrate-binding protein OsmF K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c39810 proline/glycine/betaine transporer, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c39820 ABC transporter, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c29690 proZ; ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c29700 proW; ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c06090 yehY; putative osmoprotectant uptake system permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c06110 opuBB; choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c39830 glycine betaine/carnitine/choline transport ATP-binding protein, OpuCA-like protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c29710 opuCA2; glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c06100 opuCA1; glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c08820 ugpC1; sn-glycerol-3-phosphate import ATP-bindingprotein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c08710 malE; maltose-binding protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D ARUE_c08720 malF; maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D ARUE_c08730 ganQ; putative arabinogalactan oligomer transport system permease protein GanQ K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D ARUE_c18500 putative secreted sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c31620 extracellular solute-binding domain protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c08970 putative extracellular sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c04120 yurO1; putative ABC transporter extracellular-binding protein YurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c17680 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c14530 yurO2; putative ABC transporter extracellular-binding protein YurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c04130 yurN1; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c08960 yurN4; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c18480 putative sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c17690 putative sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c14520 yurN5; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c31610 msmF; multiple sugar-binding transport system permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c04140 yurM1; putative ABC transporter permease protein YurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c18490 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c08950 yurM3; putative ABC transporter permease protein YurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c31600 msmG; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c17700 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c14510 putative ABC transporter permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c04280 aglE; alpha-glucosides-binding extracellular protein AglE K10232 aglE; alpha-glucoside transport system substrate-binding protein D ARUE_c04290 aglF; alpha-glucoside transport system permease protein AglF K10233 aglF; alpha-glucoside transport system permease protein D ARUE_c04300 aglG; alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein D ARUE_c10820 extracellular solute-binding domain protein K17318 lplA; putative aldouronate transport system substrate-binding protein D ARUE_c13720 lplA; putative lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein D ARUE_c10800 lplB1; protein LplB K17319 lplB; putative aldouronate transport system permease protein D ARUE_c13700 lplB2; protein LplB K17319 lplB; putative aldouronate transport system permease protein D ARUE_c10810 lplC; protein LplC K17320 lplC; putative aldouronate transport system permease protein D ARUE_c13710 ytcP; putative ABC transporter permease protein YtcP K17320 lplC; putative aldouronate transport system permease protein D ARUE_c36170 putative ABC transporter-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D ARUE_c36160 putative ABC transporter permease protein K10237 thuF; trehalose/maltose transport system permease protein D ARUE_c36150 putative ABC transporter permease protein K10238 thuG; trehalose/maltose transport system permease protein D ARUE_c05800 putative extracellular solute-binding domain protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein D ARUE_c05810 yurN2; putative ABC transporter permease protein YurN K10201 ngcF; N-acetylglucosamine transport system permease protein D ARUE_c05820 yurM2; putative ABC transporter permease protein YurM K10202 ngcG; N-acetylglucosamine transport system permease protein D ARUE_c00860 putative extracellular sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D ARUE_c00850 lacF1; lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein D ARUE_c00840 araQ1; L-arabinose transport system permease protein AraQ K10242 cebG; cellobiose transport system permease protein D ARUE_c42370 putative extracellular sugar-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein D ARUE_c42360 putative ABC transporter permease protein K17330 dasB; N,N'-diacetylchitobiose transport system permease protein D ARUE_c42350 putative ABC transporter permease protein y4oR K17331 dasC; N,N'-diacetylchitobiose transport system permease protein D ARUE_c11490 sugar-binding extracellular receptor protein of ABC transporter system K10546 chvE; putative multiple sugar transport system substrate-binding protein D ARUE_c05020 chvE; multiple sugar-binding extracellular receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein D ARUE_c11500 xylH2; xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D ARUE_c05040 xylH1; xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D ARUE_c11510 araG2; L-arabinose transport ATP-binding protein AraG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c05030 araG1; L-arabinose transport ATP-binding protein AraG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c11890 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D ARUE_c11910 yufP; putative ABC transporter permease protein YufP K23535 nupB; general nucleoside transport system permease protein D ARUE_c11920 yufQ; putative ABC transporter permease protein YufQ K23536 nupC; general nucleoside transport system permease protein D ARUE_c11900 yufO; putative ABC transporter ATP-binding protein YufO K23537 nupA; general nucleoside transport system ATP-binding protein D ARUE_c08260 rbsB1; D-ribose-binding extracellular protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c20210 rbsB3; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c18200 rbsB2; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c08280 rbsC1; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c20200 rbsC3; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c18190 rbsC2; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c20240 rbsA3; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c08270 rbsA1; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c22780 rbsA4; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c18180 rbsA2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c30750 ugpB; sn-glycerol-3-phosphate-binding extracellular protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ARUE_c19290 putative ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ARUE_c30730 ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19260 ugpA1; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ARUE_c30740 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19250 yesQ2; putative ABC transporter permease protein YesQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19300 ugpC2; sn-glycerol-3-phosphate import ATP-bindingprotein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ARUE_c01890 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D ARUE_c01900 pstC; phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D ARUE_c01910 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D ARUE_c01920 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ARUE_c11410 phnD; phosphate-binding protein of phosphonate ABC transporter PhnD K02044 phnD; phosphonate transport system substrate-binding protein D ARUE_c11390 phnE; putative phosphonates transport system permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ARUE_c11400 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ARUE_c29390 gluB; glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D ARUE_c29400 glnM1; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D ARUE_c29410 gluD; glutamate transport system permease protein GluD K10007 gluD; glutamate transport system permease protein D ARUE_c29380 gluA; glutamate transport ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c09840 tcyA; L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein D ARUE_c09830 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein D ARUE_c09820 tcyC1; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c12070 braC; branched-chain amino acid ABC transporter BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein D ARUE_c12120 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D ARUE_c12110 braE; high-affinity branched-chain amino acid transport system permease protein BraE K01998 livM; branched-chain amino acid transport system permease protein D ARUE_c12100 livG; putative branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D ARUE_c12090 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein D ARUE_c29580 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D ARUE_c29560 dppB2; dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D ARUE_c29550 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D ARUE_c29540 gsiA3; glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D ARUE_c40170 hypothetical protein K13889 gsiB; glutathione transport system substrate-binding protein D ARUE_c40200 putative peptide transport permease protein K13890 gsiC; glutathione transport system permease protein D ARUE_c40190 putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D ARUE_c40180 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D ARUE_c05290 Fe3+-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D ARUE_c38990 Fe3+-siderophore binding protein, FepB family K25286 fagD; iron-siderophore transport system substrate-binding protein D ARUE_c03590 Fe3+-siderophore ABC transporter, transmembrane subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c05280 Fe3+-siderophore ABC transporter, transmembrane subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c38980 Fe3+-siderophore ABC transporter, permease subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c03600 Fe3+-siderophore ABC transporter, transmembrane subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c05270 Fe3+-siderophoreABC transporter, transmembrane subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c38970 Fe3+-siderophore ABC transporter, permease subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c03610 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c05260 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c38960 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c21690 Fe3+-siderophore binding protein, FhuD family K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D ARUE_c21700 Fe3+-hydroxamate ABC transporter, permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D ARUE_c21680 Fe3+-siderophore ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D ARUE_c34100 metal-binding extracellular protein interacting with ABC transporter K11601 mntC; manganese transport system substrate-binding protein D ARUE_c34080 permease component of ABC-type metal cation transporter K11602 mntB; manganese transport system permease protein D ARUE_c34090 ATPase component of ABC-type metal cation transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D ARUE_c22700 putative BioY family protein K03523 bioY; biotin transport system substrate-specific component D ARUE_c22680 putative cobalt transport protein K16783 bioN; biotin transport system permease protein D ARUE_c22690 putative ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D ARUE_c38060 putative cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D ARUE_c24840 putative ABC transporter, integral membrane protein K11051 cylB; multidrug/hemolysin transport system permease protein D ARUE_c24830 yfiL; putative ABC transporter ATP-binding protein YfiL K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D ARUE_c11660 putative ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein D ARUE_c11670 nodJ; nodulation protein J K09694 nodJ; lipooligosaccharide transport system permease protein D ARUE_c11650 nodI1; Nod factor export ATP-binding protein I K09695 nodI; lipooligosaccharide transport system ATP-binding protein D ARUE_c43150 putative ABC transporter, permease protein K09813 hrtB; hemin transport system permease protein D ARUE_c43160 ATPase component of putative ABC transporter K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D ARUE_c26590 ATPase component of ABC-type transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ARUE_c28110 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ARUE_c28120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ARUE_c10170 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c35830 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c35820 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c10180 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c16740 cydD; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D ARUE_c34050 tlrC; tylosin resistance ATP-binding protein TlrC K18230 tylC; macrolide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:arr02060] D ARUE_c40040 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ARUE_c02910 hPr2; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c23670 hPr3; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c40050 hPr4; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c40020 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D ARUE_c02920 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D ARUE_c30130 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D ARUE_c02930 fruK1; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D ARUE_c08150 fruK2; 1-phosphofructokinase FruK K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:arr03070] D ARUE_c24500 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ARUE_c24490 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ARUE_c31160 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D ARUE_c30780 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ARUE_c24510 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D ARUE_c43360 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D ARUE_c28450 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ARUE_c26180 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ARUE_c26130 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ARUE_c23390 tatA; twin-arginine translocation protein, TatA/E K03116 tatA; sec-independent protein translocase protein TatA D ARUE_c29310 putative twin-arginine translocation protein K03117 tatB; sec-independent protein translocase protein TatB D ARUE_c23400 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D ARUE_232p02040 protein, TraG family K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:arr02020] D ARUE_c10270 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c33760 resE; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c37500 phoD; alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D ARUE_c08470 senX; signal-transduction histidine kinase SenX K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D ARUE_c08480 regX2; sensory transduction protein RegX K07776 regX3; two-component system, OmpR family, response regulator RegX3 D ARUE_c01890 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D ARUE_c30650 putative extracellular protease K04771 degP; serine protease Do [EC:3.4.21.107] D ARUE_c31730 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D ARUE_c31720 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D ARUE_232p01720 putative potassium-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D ARUE_c19220 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ARUE_c06660 putative 52.8 kDa protein in TAR-I ttuC' 3'region K07793 tctA; putative tricarboxylic transport membrane protein D ARUE_c19230 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D ARUE_c06670 putative integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein D ARUE_c06680 yflP; UPF0065 protein YflP K07795 tctC; putative tricarboxylic transport membrane protein D ARUE_c19210 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ARUE_c22560 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ARUE_c13170 lsdA; levansucrase LsdA K00692 sacB; levansucrase [EC:2.4.1.10] D ARUE_c28790 degQ; protease DegQ K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D ARUE_c28500 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D ARUE_c28510 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D ARUE_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ARUE_c34100 metal-binding extracellular protein interacting with ABC transporter K11601 mntC; manganese transport system substrate-binding protein D ARUE_c34090 ATPase component of ABC-type metal cation transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D ARUE_c34080 permease component of ABC-type metal cation transporter K11602 mntB; manganese transport system permease protein D ARUE_c27460 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ARUE_c14080 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c14470 citE; citrate lyase subunit beta-like protein CitE K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D ARUE_c31530 hypothetical protein, malate synthase superfamily K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D ARUE_c39700 ytsJ; putative NAD-dependent malic enzyme 4 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ARUE_c35430 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D ARUE_c19500 devS; redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D ARUE_c19490 devR; transcriptional regulatory protein devR (dosR) K07695 devR; two-component system, NarL family, response regulator DevR D ARUE_c30600 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30080 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30610 cpaE; putative flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D ARUE_c34840 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c28200 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c30620 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_113p00830 putative type II/IV secretion system protein,VirB11 -like protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c34830 hypothetical protein K12510 tadB; tight adherence protein B D ARUE_c28190 putative bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D ARUE_c30630 putative bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D ARUE_c28180 putative type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D ARUE_c30640 putative bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D ARUE_c26150 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c35220 dctA2; C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D ARUE_c15780 dctA1; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D ARUE_c35030 putative cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ARUE_c03330 glsA1; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c32270 glsA2; glutaminase GlsA K01425 glsA; glutaminase [EC:3.5.1.2] D ARUE_c16720 putative cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D ARUE_c16730 putative cytochrome d ubiquinol oxidase subunit K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D ARUE_c37870 ptpA; Low molecular weight protein-tyrosine-phosphatase PtpA K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D ARUE_c33650 Low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D ARUE_c02340 pme; pectinesterase Pme K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D ARUE_c41230 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:arr02024] D ARUE_c17380 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D ARUE_c34380 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ARUE_c16030 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase AroH K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D ARUE_c31720 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D ARUE_c41120 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D ARUE_c05510 putative amino acid permease K20265 gadC; glutamate:GABA antiporter D ARUE_c12070 braC; branched-chain amino acid ABC transporter BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein D ARUE_c12120 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D ARUE_c12110 braE; high-affinity branched-chain amino acid transport system permease protein BraE K01998 livM; branched-chain amino acid transport system permease protein D ARUE_c12100 livG; putative branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D ARUE_c12090 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein D ARUE_c02340 pme; pectinesterase Pme K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D ARUE_c13390 hypothetical protein K20276 bapA; large repetitive protein D ARUE_c15970 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c12650 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c35030 putative cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ARUE_c17310 ribBA2; riboflavin biosynthesis protein RibBA K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D ARUE_c17280 ribD4; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D ARUE_c13960 putative membrane protein, DUF606 family K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D ARUE_c29580 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D ARUE_c29560 dppB2; dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D ARUE_c29550 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D ARUE_c29540 gsiA3; glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D ARUE_c07630 gsiB1; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c07800 gsiB2; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c26740 hbpA; heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_232p01620 calT6; protein CalT6 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c28630 dppA; dipeptide transport protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c20850 putative ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c21220 ddpA; putative D,D-dipeptide-binding extracellular protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c07640 gsiC; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c07790 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_232p01590 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c28620 dppB1; dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c20860 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c21230 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c28610 gsiD2; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c20870 dppC1; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c21240 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c07780 putative peptide import ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_232p01600 appC; oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c07660 gsiA1; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_232p01610 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c28600 gsiA2; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c21250 yejF; putative ABC transporter ATP-binding protein YejF K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c20880 putative peptide ABC transporter ATP-binding protein y4tR K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c07770 appF1; oligopeptide transport ATP-binding proteinAppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ARUE_c20890 appF2; oligopeptide transport ATP-binding proteinAppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ARUE_c43360 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D ARUE_c15360 blaSE; glutamyl endopeptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D ARUE_c32890 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c32750 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c31160 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D ARUE_c30780 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ARUE_c24510 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D ARUE_c28450 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ARUE_c26180 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ARUE_c26130 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ARUE_c31850 plcN; Non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D ARUE_c08260 rbsB1; D-ribose-binding extracellular protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c20210 rbsB3; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c18200 rbsB2; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein C 02040 Flagellar assembly [PATH:arr02040] D ARUE_c09840 tcyA; L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein D ARUE_c16650 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:arr01501] D ARUE_c28990 nagZ; beta-hexosaminidase NagZ K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ARUE_c42180 ybbD; putative lipoprotein YbbD K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D ARUE_c29580 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D ARUE_c29560 dppB2; dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D ARUE_c29550 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D ARUE_c29540 gsiA3; glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D ARUE_c16700 putative peptidase family M48 K02172 blaR1; bla regulator protein blaR1 D ARUE_c16710 putative transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ARUE_c16150 spoVD; stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:arr01502] D ARUE_c26360 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ARUE_c11550 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c30380 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c16170 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D ARUE_c16180 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ARUE_c16210 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:arr01503] D ARUE_c30650 putative extracellular protease K04771 degP; serine protease Do [EC:3.4.21.107] D ARUE_c00130 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ARUE_c27460 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ARUE_c14080 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:arr01000] C 01001 Protein kinases [BR:arr01001] D ARUE_c00250 pknB; putative serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ARUE_c16040 spk1; serine/threonine-protein kinase PK-1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ARUE_c00260 pknA; putative serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ARUE_c40900 putative serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ARUE_c41330 putative serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D ARUE_c36420 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D ARUE_c33050 yveL; putative tyrosine-protein kinase YveL K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D ARUE_c10270 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c33760 resE; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c08470 senX; signal-transduction histidine kinase SenX K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D ARUE_c31730 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D ARUE_c28500 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D ARUE_c07530 putative signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ARUE_c09550 yycG; sensor histidine kinase YycG K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ARUE_c19500 devS; redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D ARUE_c13600 citS2; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c06690 citS1; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c15770 citS3; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c14270 yehU; inner membrane protein YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D ARUE_c28380 pdtaS; putative sensor histidine kinase PdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D ARUE_c33710 dhkJ; hybrid signal transduction histidine kinase J K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:arr01009] D ARUE_c12530 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ARUE_c00290 pstP1; PP2C-family Ser/Thr phosphatase PstP K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D ARUE_c13440 pstP2; PP2C-family Ser/Thr phosphatase PstP K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D ARUE_c22800 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:arr01002] D ARUE_232p00550 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_232p00720 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_c16300 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36] D ARUE_c12310 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c30570 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_113p00920 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c15310 pcp; pyrrolidone-carboxylate peptidase Pcp K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D ARUE_c35540 putative glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ARUE_c30100 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D ARUE_c10010 glutamine amidotransferase domain-containing protein K07010 K07010; putative glutamine amidotransferase D ARUE_c09730 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D ARUE_c03810 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D ARUE_c36510 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D ARUE_c17450 glutamate synthase [NADPH/NADH], alpha subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D ARUE_c30510 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D ARUE_c11690 hypothetical protein K19200 IAL; isopenicillin-N N-acyltransferase like protein D ARUE_c00790 yraA; putative cysteine protease YraA K05520 yhbO; deglycase [EC:3.5.1.124] D ARUE_c00230 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D ARUE_c20430 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D ARUE_c09210 putative CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D ARUE_c34110 putative CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D ARUE_c05590 putative CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D ARUE_c13870 putative CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein D ARUE_c22860 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ARUE_c25440 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D ARUE_c39130 hypothetical protein K01414 prlC; oligopeptidase A [EC:3.4.24.70] D ARUE_c24600 dcp; peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D ARUE_232p01330 microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] D ARUE_c23810 endothelin-converting enzyme K07386 pepO; putative endopeptidase [EC:3.4.24.-] D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c05150 putative peptidase M16 family K07263 pqqL; zinc protease [EC:3.4.24.-] D ARUE_c16610 pepA; putative cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D ARUE_c29420 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D ARUE_c19150 abgB; aminobenzoyl-glutamate utilization proteinB K12941 abgB; aminobenzoyl-glutamate utilization protein B D ARUE_c30760 map4; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ARUE_c09280 map1; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ARUE_c25570 map3; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ARUE_c16390 map2; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D ARUE_232p01570 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ARUE_c29260 pepPI; Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D ARUE_c01350 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ARUE_c32040 putative protease, peptidase M48 superfamily K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D ARUE_c36040 putative zinc metallopeptidase family protein K16922 yydH; putative peptide zinc metalloprotease protein D ARUE_c16700 putative peptidase family M48 K02172 blaR1; bla regulator protein blaR1 D ARUE_c24260 putative integral membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-] D ARUE_c15360 blaSE; glutamyl endopeptidase K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D ARUE_c30650 putative extracellular protease K04771 degP; serine protease Do [EC:3.4.21.107] D ARUE_c28790 degQ; protease DegQ K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D ARUE_c32890 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c32750 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c07910 putative peptidase y4nA K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D ARUE_c33730 ptrB; protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D ARUE_c01290 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ARUE_c25360 clpP1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D ARUE_c25370 clpP2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D ARUE_113p00730 putative ATP-dependent Lon-protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D ARUE_c28860 ylbL; uncharacterized protein YlbL K07177 K07177; Lon-like protease D ARUE_c15140 lexA; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D ARUE_113p00480 putative UmuD-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ARUE_c13030 umuD; putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ARUE_c26010 lepB1; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_c26020 lepB2; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_c33680 lepB3; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D ARUE_c29990 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D ARUE_c41240 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D ARUE_c16550 tri; putative tricorn protease Tri K08676 tri; tricorn protease [EC:3.4.21.-] D ARUE_c38040 putative penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11] D ARUE_c23330 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D ARUE_c23320 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D ARUE_c36000 ggt; gamma-glutamyltranspeptidase Ggt K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] C 01003 Glycosyltransferases [BR:arr01003] D ARUE_c23430 dpm; dolichol-phosphate mannosyltransferase Dpm K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D ARUE_c12660 hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D ARUE_c14130 putative glycosyl transferase, group 1 family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D ARUE_c20330 polysaccharide biosynthesis protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315] D ARUE_c11180 glycosyl transferase, GT1 family K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D ARUE_c22930 putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D ARUE_c27610 putative glycosyl transferase, WecB/TagA/CpsF family protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D ARUE_c33110 glycosyl transferase, WecG/TagA family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187] D ARUE_c27590 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D ARUE_c13170 lsdA; levansucrase LsdA K00692 sacB; levansucrase [EC:2.4.1.10] D ARUE_c03250 putative integral membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D ARUE_c25590 putative integral membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D ARUE_c28310 putative glycosyltransferase K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D ARUE_c07150 putative family 2 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D ARUE_c35730 glycosyl transferase domain, group 2 family protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D ARUE_c01630 putative glucosyl transferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173] D ARUE_c08840 otsA; trehalose-6-phosphate synthase OtsA K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] C 01005 Lipopolysaccharide biosynthesis proteins [BR:arr01005] D ARUE_c01130 gmhA; putative phosphoheptose isomerase GmhA K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ARUE_c10510 SIS (sugar ISomerase) domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D ARUE_c01090 putative haloacid dehalogenase-like hydrolase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D ARUE_c01140 hldE1; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ARUE_c01170 hldE2; bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D ARUE_c27590 wecA; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:arr01011] D ARUE_c38020 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c26390 murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D ARUE_c31470 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D ARUE_c16220 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D ARUE_c16190 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D ARUE_c16160 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D ARUE_c26360 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D ARUE_c09440 putative FemAB family protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10] D ARUE_c11550 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c30380 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1] D ARUE_c27270 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3] D ARUE_c16180 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D ARUE_c16210 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D ARUE_c23230 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D ARUE_c43240 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D ARUE_c16150 spoVD; stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ARUE_c00270 pbpA1; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D ARUE_c01290 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c09730 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D ARUE_c03810 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D ARUE_c00230 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D ARUE_c20430 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70] D ARUE_c24340 putative uncharacterized BCR YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:arr01004] D ARUE_c24850 putative [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c25900 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D ARUE_c35100 putative 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ARUE_c25910 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D ARUE_c17970 kasA1; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c25930 kasA2; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D ARUE_c24860 fabG6; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22760 fabG4; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c22970 fabG5; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c10310 putative 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D ARUE_c24880 fabZ; putative beta-hydroxyacyl-[acyl-carrier-protein]dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D ARUE_c27930 hypothetical protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ARUE_c29530 putative lipase/esterase, SGNH-hydrolase superfamily K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D ARUE_c25500 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_c41740 putative acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_113p00210 putative acyl-CoA thioesterase K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D ARUE_c40440 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D ARUE_c33260 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D ARUE_c04800 acsm; acyl-coenzyme A synthetase ACSM K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c34910 acsA; acetyl-coenzyme A synthetase AcsA K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D ARUE_c15970 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c12650 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c31920 putative acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D ARUE_c22390 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c15850 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c16020 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D ARUE_c26380 1-acylglycerol-3-phosphate O-acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:arr01006] D ARUE_c16080 putative dimethylallyltransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ARUE_c03180 putative geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D ARUE_c12270 uppS1; undecaprenyl pyrophosphate synthase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D ARUE_c23780 uppS2; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D ARUE_c03170 crtB; phytoene synthase CrtB K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D ARUE_c15090 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ARUE_c34150 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D ARUE_c22540 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:arr01007] D ARUE_c26490 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c39450 putative glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c15540 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ARUE_c11730 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ARUE_c08540 cysS1; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ARUE_c27700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ARUE_c26580 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ARUE_c25290 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ARUE_c25320 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ARUE_c24010 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ARUE_c01590 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ARUE_c24430 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ARUE_c24440 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ARUE_c13970 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D ARUE_c01010 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ARUE_c14650 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ARUE_c24640 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ARUE_c24360 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ARUE_c03090 pheS1; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15340 pheS2; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15350 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ARUE_c40540 aspartate aminotransferase family protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c14760 aspC1; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c31180 aspC4; aspartate aminotransferase AspC K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D ARUE_c29670 aspC3; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c37520 aspC5; putative aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D ARUE_c26290 putative aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D ARUE_c15160 hisC2; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c05920 hisC1; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c40380 pyridoxalphosphate dependent enzyme, aspartate aminotransferase superfamily K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D ARUE_c13770 kbl; 2-amino-3-ketobutyrate coenzyme A ligase Kbl K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D ARUE_c10420 putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D ARUE_c36090 putative aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D ARUE_c15450 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D ARUE_c32180 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D ARUE_c21120 putative 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D ARUE_c10430 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D ARUE_c18050 hemL1; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ARUE_c29000 hemL2; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D ARUE_c26520 ilvE; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D ARUE_c36440 putative serine-pyruvate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] D ARUE_c09680 serC; putative phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:arr00194] D ARUE_c27490 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D ARUE_c27500 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D ARUE_c27510 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D ARUE_c27520 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D ARUE_c27530 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D ARUE_c27540 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D ARUE_c27550 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D ARUE_c27560 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ARUE_c27580 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I D ARUE_c27570 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:arr03000] D ARUE_c40680 ydeE; putative HTH-type transcriptional regulator YdeE K13653 K13653; AraC family transcriptional regulator D ARUE_c15510 ada; putative regulatory protein Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ARUE_c09580 HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D ARUE_c21000 cynR; HTH-type transcriptional regulator CynR K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D ARUE_c17670 LysR family transcriptional regulator K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator D ARUE_c40510 nac; nitrogen assimilation regulatory protein Nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D ARUE_c13850 glpR; glycerol-3-phosphate regulon repressor GlpR K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D ARUE_c02940 gatR; galactitol utilization operon repressor GatR K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D ARUE_c14540 cytR3; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c10940 cytR2; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c02400 purR3; HTH-type transcriptional repressor PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c04110 degA2; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c05610 ccpA2; glucose-resistance amylase regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c06590 purR5; HTH-type transcriptional repressor PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c08940 purR6; HTH-type transcriptional repressor PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c18470 ccpA4; glucose-resistance amylase regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c19770 degA3; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c20840 galR; HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c32670 degA4; HTH-type transcriptional regulator DegA K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c34580 ccpA5; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c37810 cytR4; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c34950 HTH-type transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c38320 putative transcriptional regulator, lacI family domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c38460 purR8; HTH-type transcriptional repressor PurR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D ARUE_c04910 cytR1; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D ARUE_c06480 purR4; HTH-type transcriptional repressor PurR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D ARUE_c36180 ccpA6; glucose-resistance amylase regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D ARUE_c23660 dasR3; HTH-type transcriptional repressor DasR K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D ARUE_c22100 dasR2; HTH-type transcriptional repressor DasR K24969 dasR; GntR family transcriptional regulator, nutrient-sensing system regulator D ARUE_c28820 transcription regulator, GntR family K03710 K03710; GntR family transcriptional regulator D ARUE_c11430 transcriptional regulator, GntR-family K03710 K03710; GntR family transcriptional regulator D ARUE_c20390 transcription regulator, GntR family K03710 K03710; GntR family transcriptional regulator D ARUE_c18660 GntR domain protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ARUE_c39300 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ARUE_c00330 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ARUE_c34590 putative transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ARUE_c07610 tetracycline repressor protein (TetR family) K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D ARUE_c11010 putative transcriptional regulator, TetR family K09017 rutR; TetR/AcrR family transcriptional regulator D ARUE_c18850 hypothetical protein K09017 rutR; TetR/AcrR family transcriptional regulator D ARUE_c39710 transcriptional regulator, TetR family K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D ARUE_c04870 betI; HTH-type transcriptional regulator BetI K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D ARUE_c31950 transcriptional regulator, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D ARUE_c41320 pknK2; serine/threonine-protein kinase PknK K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D ARUE_c11860 ohrR; organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ARUE_c06060 MerR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ARUE_c26710 putative transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ARUE_c33440 putative transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D ARUE_232p00810 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ARUE_c36760 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D ARUE_c37190 hspR; putative heat shock protein HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ARUE_c11210 putative transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D ARUE_c04880 putative transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D ARUE_c27860 fur1; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ARUE_c32070 fur2; ferric uptake regulation protein Fur K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D ARUE_c35910 KdgR acetate operon repressor, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ARUE_c35420 iclR; acetate operon repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ARUE_c18390 transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ARUE_c42330 yagI3; putative HTH-type transcriptional regulator YagI K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ARUE_c37090 putative transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D ARUE_c41790 pcaR; Pca regulon regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D ARUE_c35030 putative cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ARUE_c07850 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D ARUE_c37700 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ARUE_c37670 arsR; transcriptional regulator, ArsR family/phosphatase family protein K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D ARUE_232p00440 putative transcriptional regulator, ArsR family K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D ARUE_232p00570 transcriptional regulator, ArsR family K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D ARUE_232p00700 transcriptional regulator, ArsR family K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D ARUE_232p00460 putative transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D ARUE_c06850 putative helix-turn-helix domain protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D ARUE_c15030 putative helix-turn-helix domain protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator D ARUE_c24120 putative transcriptional regulator, PadR family K26740 vanR; PadR family transcriptional regulator, regulator of vanillate utilization D ARUE_c29940 putative transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D ARUE_c11590 putative transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D ARUE_c39910 putative transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D ARUE_c09700 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D ARUE_232p00600 putative Mn-or Fe-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D ARUE_c28050 putative iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D ARUE_c16710 putative transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ARUE_c13360 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ARUE_c18030 sigma 54 specific transcriptional regulator, fisfamily K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D ARUE_c34330 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D ARUE_c06350 putA; bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D ARUE_c12470 whiB; transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D ARUE_c42380 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D ARUE_c32200 putative transcription regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D ARUE_232p01000 putative partitioning protein, parB-family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ARUE_c43320 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ARUE_c08500 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D ARUE_c15470 argR; arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism D ARUE_c23900 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D ARUE_c04760 tenA; protein TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D ARUE_c22110 putative transcriptional regulator, PaaX-like protein family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ARUE_113p00240 putative transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ARUE_232p01750 putative transcriptional regulator, PaaX family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ARUE_c41670 putative transcriptional regulator, PaaX-like protein family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ARUE_113p00160 putative transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ARUE_c31230 putative stress-responsive transcriptional regulator PspC K03973 pspC; phage shock protein C D ARUE_c24050 deoR; deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D ARUE_c24250 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D ARUE_c02750 putative protease synthase and sporulation negative regulatory protein K07734 paiB; transcriptional regulator D ARUE_c21750 putative dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D ARUE_c16360 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D ARUE_c16120 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:arr03021] D ARUE_c09620 rad25; putative DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D ARUE_c30680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ARUE_c31060 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ARUE_c31050 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ARUE_c24160 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ARUE_c16650 hrdB; RNA polymerase principal sigma factor HrdB K03086 rpoD; RNA polymerase primary sigma factor D ARUE_c40780 putative RNA polymerase sigma (70) factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ARUE_c27980 rpoE1; RNA polymerase sigma-E factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ARUE_c28720 sigK; RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ARUE_c36870 putative RNA polymerase ECF-subfamily sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ARUE_c04240 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D ARUE_c01070 sigF; RNA polymerase sigma-F factor SigF K03090 sigB; RNA polymerase sigma-B factor D ARUE_c14710 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D ARUE_c24270 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D ARUE_c31150 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ARUE_c36390 cseB; transcriptional regulatory protein CseB K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D ARUE_c07300 putative STAS domain protein K04749 rsbV; anti-sigma B factor antagonist D ARUE_c36410 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D ARUE_c36420 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D ARUE_c21750 putative dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D ARUE_c12210 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D ARUE_c27650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:arr03019] D ARUE_c39390 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D ARUE_c25240 rng; ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D ARUE_c26250 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ARUE_c14990 ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-] D ARUE_c08580 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D ARUE_c25600 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D ARUE_c31690 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ARUE_c07880 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c09010 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ARUE_c14820 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D ARUE_c27650 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D ARUE_c37220 dnaK2; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c20080 danK; chaperone protein Dank K04043 dnaK; molecular chaperone DnaK D ARUE_c34240 dnaK1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c09520 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30260 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c31350 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D ARUE_c42140 putative polyphosphate kinase 2 family protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D ARUE_c43220 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D ARUE_c39760 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A D ARUE_c22410 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D ARUE_c23410 helY; putative helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D ARUE_c27800 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D ARUE_c21950 hrpB; ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:arr03011] D ARUE_c22240 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D ARUE_c14170 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D ARUE_c30910 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D ARUE_c24390 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D ARUE_c30810 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D ARUE_c42950 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D ARUE_c31030 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D ARUE_c30840 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D ARUE_c30550 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D ARUE_c30980 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D ARUE_c30690 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D ARUE_c31040 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D ARUE_c30700 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D ARUE_c38870 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D ARUE_c14810 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D ARUE_c26070 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D ARUE_c30880 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D ARUE_c42930 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D ARUE_c30930 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D ARUE_c23960 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D ARUE_c31130 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D ARUE_c30940 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D ARUE_c30970 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D ARUE_c30960 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D ARUE_c30850 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D ARUE_c30830 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D ARUE_c42920 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D ARUE_c31100 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D ARUE_c31140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D ARUE_c31090 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D ARUE_c30560 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D ARUE_c30870 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D ARUE_c30790 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D ARUE_c30900 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D ARUE_c30670 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D ARUE_c30820 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D ARUE_c26030 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D ARUE_c15250 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D ARUE_c25220 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D ARUE_c30920 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D ARUE_c30950 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D ARUE_c30860 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D ARUE_c25210 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D ARUE_c38890 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D ARUE_c30890 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D ARUE_c30800 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D ARUE_c22840 rpmE; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D ARUE_c26260 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D ARUE_c38880 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D ARUE_c15240 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D ARUE_c12830 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D ARUE_c01480 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38790 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c15580 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38840 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c08660 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c01520 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c01460 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38810 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01500 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c15560 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c08640 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38860 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01470 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38800 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c08650 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c01510 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38850 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c15570 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:arr03009] D ARUE_c26250 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ARUE_c25600 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-] D ARUE_c39390 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D ARUE_c23830 era; GTP-binding protein Era K03595 era; GTPase D ARUE_c25200 GTP-binding protein, Obg subfamily K03979 obgE; GTPase [EC:3.6.5.-] D ARUE_c21750 putative dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D ARUE_c14710 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA D ARUE_c24270 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D ARUE_c31150 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D ARUE_c12740 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D ARUE_c17250 putative RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D ARUE_c25090 rlmG; ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D ARUE_c15110 ybxB; uncharacterized protein YbxB K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D ARUE_c26310 putative SAM-dependent methyltransferase, class I K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D ARUE_c23880 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D ARUE_c43340 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ARUE_c16130 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D ARUE_c12670 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D ARUE_c15620 yqxC; uncharacterized protein YqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D ARUE_c23470 S-adenosylmethionine-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D ARUE_c08550 putative rRNA methyltransferase TrmH/SpoU family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D ARUE_c07220 putative RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ARUE_c15820 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D ARUE_c16310 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D ARUE_c30350 rimI; ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D ARUE_c38770 putative ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D ARUE_c30040 putative ribosomal-protein-alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D ARUE_c26050 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D ARUE_c36050 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D ARUE_c25240 rng; ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12] D ARUE_c24350 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D ARUE_c31690 deaD; cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D ARUE_c29720 GTPase, YjeQ/EngC-like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ARUE_c28010 GTPase, YjeQ/EngC-like protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D ARUE_c15860 engA; GTP-binding protein EngA K03977 engA; GTPase D ARUE_c15120 ynbA; putative GTP-binding protein YnbA K03665 hflX; GTPase D ARUE_c27620 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ARUE_c24480 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D ARUE_c14740 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D ARUE_c14700 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D ARUE_c13950 putative S4 domain protein K14761 rlbA; ribosome-associated protein D ARUE_c25140 hypothetical protein K09710 ybeB; ribosome-associated protein D ARUE_c23850 putative metalloprotease K07042 ybeY; probable rRNA maturation factor D ARUE_c29600 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase D ARUE_c26270 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:arr03016] D ARUE_c08580 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D ARUE_c26490 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c39450 putative glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c14650 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D ARUE_c25290 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D ARUE_c24010 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ARUE_c26580 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D ARUE_c27700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ARUE_c01590 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D ARUE_c24430 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ARUE_c24360 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D ARUE_c13970 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D ARUE_c24640 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D ARUE_c01010 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D ARUE_c08540 cysS1; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D ARUE_c25320 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D ARUE_c24440 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D ARUE_c03090 pheS1; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15340 pheS2; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D ARUE_c15350 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D ARUE_c15540 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ARUE_c11730 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D ARUE_c23280 trmI; tRNA (adenine-N(1)-)-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D ARUE_c36830 trmB; tRNA (guanine-N(7)-)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D ARUE_c30660 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D ARUE_c14770 putative tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D ARUE_c26860 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c28660 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c27620 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D ARUE_c15090 miaA; tRNA dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D ARUE_c27250 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D ARUE_c17020 putative ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D ARUE_c17100 putative deacylase, YbaK family K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ARUE_c31080 putative ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D ARUE_c07450 putative cytidine deaminase / nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D ARUE_c15080 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D ARUE_c26040 trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D ARUE_c28710 putative tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D ARUE_c15260 putative rRNA methyltransferase, SpoU class K03437 spoU; RNA methyltransferase, TrmH family D ARUE_c07220 putative RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D ARUE_c28640 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D ARUE_c31290 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ D ARUE_c07410 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D ARUE_c06980 tgt; queuine tRNA-ribosyltransferase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D ARUE_c01310 putative tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D ARUE_c30360 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D ARUE_c30340 gcp; putative O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D ARUE_c30370 ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D ARUE_c14820 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:arr03012] D ARUE_c14730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ARUE_c15230 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ARUE_c14180 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D ARUE_c31010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D ARUE_c22000 elongation factor G-like protein K02355 fusA; elongation factor G D ARUE_c31020 fusA; elongation factor G K02355 fusA; elongation factor G D ARUE_c27640 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D ARUE_c14200 frr; ribosome-recycling factor Frr K02838 frr; ribosome recycling factor D ARUE_c02790 putative SAM-dependent methyltransferase, PrmC-/HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D ARUE_c27630 putative SAM-dependent methyltransferase, PrmC-/HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D ARUE_c12840 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D ARUE_c30710 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D ARUE_c24280 efp; elongation factor P K02356 efp; elongation factor P D ARUE_c28130 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D ARUE_c21670 hypothetical protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:arr03110] D ARUE_c20120 clpB2; chaperone protein ClpB 2 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D ARUE_c36570 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D ARUE_c01620 clpC; putative ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D ARUE_c25350 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D ARUE_c37220 dnaK2; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c20080 danK; chaperone protein Dank K04043 dnaK; molecular chaperone DnaK D ARUE_c34240 dnaK1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c09520 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30260 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c37200 dnaJ3; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D ARUE_c23890 dnaJ2; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D ARUE_c20100 dnaJ1; chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein D ARUE_c37210 grpE2; protein GrpE K03687 GRPE; molecular chaperone GrpE D ARUE_c20090 grpE1; protein grpE K03687 GRPE; molecular chaperone GrpE D ARUE_c11220 18 kDa antigen 1 K13993 HSP20; HSP20 family protein D ARUE_c39200 putative S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D ARUE_c30270 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D ARUE_c30650 putative extracellular protease K04771 degP; serine protease Do [EC:3.4.21.107] D ARUE_c01350 ftsH; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D ARUE_c27560 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D ARUE_c07360 putative nuclear export factor GLE1 family protein K09796 pccA; periplasmic copper chaperone A D ARUE_c32890 putative serine protease, subtilase family K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c32750 extracellular protease K14645 K14645; serine protease [EC:3.4.21.-] D ARUE_c08810 hex; beta-N-acetylhexosaminidase Hex K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c42340 nahA; beta-hexosaminidase NahA K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D ARUE_c00130 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ARUE_c24450 ppiB; putative peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D ARUE_c04030 trx1; thioredoxin Trx K03671 TXN; thioredoxin D ARUE_c31940 trx2; thioredoxin Trx K03671 TXN; thioredoxin D ARUE_c43270 trxA; thioredoxin TrxA K03671 TXN; thioredoxin D ARUE_232p00250 thioredoxin K03671 TXN; thioredoxin D ARUE_c20130 thioredoxin C-1 K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D ARUE_c27380 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:arr04131] D ARUE_c25260 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D ARUE_c39390 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D ARUE_c09790 MAN2C1: alpha-mannosidase 2C1 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24] D ARUE_c22450 gap1; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c25660 gap2; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c08450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D ARUE_c17470 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D ARUE_c38160 putative major facilitator superfamily (MFS) transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:arr04121] C 03051 Proteasome [BR:arr03051] D ARUE_c23330 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D ARUE_c23320 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D ARUE_c23290 arc; proteasome-associated ATPase Arc K13527 mpa; proteasome-associated ATPase D ARUE_c23340 putative proteasome component K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D ARUE_c23370 pafB; protein PafB K24033 pafBC; proteasome accessory factor BC D ARUE_c23300 putative proteaseome component K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:arr03032] D ARUE_c09530 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D ARUE_c38760 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ARUE_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ARUE_c42680 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D ARUE_c14030 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101] D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c16320 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ARUE_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ARUE_c23970 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ARUE_c08400 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ARUE_c28950 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_232p02020 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c27190 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c06300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ARUE_c26000 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ARUE_c00060 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ARUE_c16780 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ARUE_c00050 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ARUE_c16670 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ARUE_c34710 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ARUE_c02880 DNA topoisomerase 1B K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:arr03036] D ARUE_c26250 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D ARUE_c01600 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2 D ARUE_c38760 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ARUE_c20100 dnaJ1; chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein D ARUE_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D ARUE_c02870 putative DNA-binding stress response protein, Dps family K04047 dps; starvation-inducible DNA-binding protein D ARUE_c09580 HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D ARUE_c26190 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein D ARUE_c15800 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A D ARUE_c15810 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B D ARUE_c28120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ARUE_c16150 spoVD; stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D ARUE_c15000 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ARUE_c13480 essC1; protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ARUE_c28360 essC2; protein EssC K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D ARUE_c16230 ftsQ; putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D ARUE_c16200 ftsW-like protein K03588 ftsW; cell division protein FtsW D ARUE_c28110 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ARUE_c16240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ARUE_c29870 yhcM; uncharacterized protein YhcM K06916 zapE; cell division protein ZapE D ARUE_c17130 putative ATPase, AFG1 family protein K06916 zapE; cell division protein ZapE D ARUE_c16270 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF D ARUE_c15790 hypothetical protein K03496 parA; chromosome partitioning protein D ARUE_c43330 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D ARUE_c15950 putative ParA-family protein K03496 parA; chromosome partitioning protein D ARUE_113p00790 putative ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D ARUE_232p00010 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D ARUE_232p01000 putative partitioning protein, parB-family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ARUE_c43320 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ARUE_c43340 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D ARUE_c25950 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D ARUE_c15670 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D ARUE_232p01820 putative site-specific recombinase K04763 xerD; integrase/recombinase XerD D ARUE_c29300 mrp; protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D ARUE_c22430 uncharacterized protein K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:arr03400] D ARUE_c00190 ogt1; methylated-DNA--protein-cysteine methyltransferase Ogt K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ARUE_c00210 ogt2; methylated-DNA--protein-cysteine methyltransferase Ogt K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D ARUE_c04670 putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D ARUE_c09480 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D ARUE_c15520 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D ARUE_c01770 putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D ARUE_c34890 putative DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D ARUE_c09620 rad25; putative DNA repair helicase RAD25 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D ARUE_c15290 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c15690 putative mutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c35960 DNA hydrolase, MutT/nudix family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c09890 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c26900 hydrolase, NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c29740 putative mutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D ARUE_c16860 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ARUE_c00180 putative DNA repair protein K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D ARUE_c15510 ada; putative regulatory protein Ada K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D ARUE_c00170 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D ARUE_c25330 mutM1; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ARUE_c26240 mutM2; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D ARUE_c07330 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D ARUE_c25420 DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D ARUE_c04330 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ARUE_c11720 exoA; exodeoxyribonuclease ExoA K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D ARUE_c13490 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D ARUE_c22200 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D ARUE_c22370 uvrA2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ARUE_c21640 uvrA1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D ARUE_c22270 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D ARUE_c22400 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D ARUE_c28890 uvrD; putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c28920 pcrA2; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c09950 pcrA1; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D ARUE_c31060 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D ARUE_c31050 rpoC; DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D ARUE_c30680 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D ARUE_c24160 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D ARUE_c12940 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D ARUE_c29640 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D ARUE_c29650 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D ARUE_c16320 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D ARUE_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D ARUE_c23970 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D ARUE_c08400 putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D ARUE_c28950 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_232p02020 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c27190 putative DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D ARUE_c06300 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c10390 vsr; XorII very short patch repair endonuclease Vsr K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D ARUE_c15060 recA; protein RecA K03553 recA; recombination protein RecA D ARUE_c24530 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D ARUE_c24520 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D ARUE_c24540 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D ARUE_c24130 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D ARUE_c27120 sbcC; nuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50 D ARUE_c27130 sbcD; nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D ARUE_c01870 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D ARUE_c00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D ARUE_c26320 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D ARUE_c23790 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D ARUE_c06290 recR; recombination protein RecR K06187 recR; recombination protein RecR D ARUE_c15640 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D ARUE_c38710 yjgR; uncharacterized protein YjgR K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D ARUE_c02820 putative DNA repair protein K10979 ku; DNA end-binding protein Ku D ARUE_c21610 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D ARUE_c02810 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D ARUE_c00060 gyrA1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ARUE_c16780 gyrA2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D ARUE_c00050 gyrB1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ARUE_c16670 gyrB2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D ARUE_c34710 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ARUE_c02880 DNA topoisomerase 1B K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D ARUE_c38760 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D ARUE_c07880 recQ1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c09010 recQ2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D ARUE_c37780 dinB2; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ARUE_c16100 dinB1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D ARUE_c13100 umuC; protein UmuC K03502 umuC; DNA polymerase V D ARUE_113p00490 putative UmuC-like protein K03502 umuC; DNA polymerase V D ARUE_113p00480 putative UmuD-like protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ARUE_c13030 umuD; putative SOS mutagenesis protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D ARUE_c15140 lexA; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D ARUE_c24650 dnaE2; error-prone DNA polymerase DnaE K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D ARUE_c15070 recX; regulatory protein RecX K03565 recX; regulatory protein D ARUE_c15130 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D ARUE_c07340 lhr; putative ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D ARUE_c31360 mutT; putative mutator mutT1 protein MutT K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D ARUE_c15660 putative mutT/nudix family protein K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D ARUE_c24940 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ARUE_c24930 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:arr03029] D ARUE_c14730 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D ARUE_c15230 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D ARUE_c14180 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D ARUE_c31010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D ARUE_c22000 elongation factor G-like protein K02355 fusA; elongation factor G D ARUE_c31020 fusA; elongation factor G K02355 fusA; elongation factor G D ARUE_c23830 era; GTP-binding protein Era K03595 era; GTPase D ARUE_c15540 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D ARUE_c24010 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D ARUE_c24430 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D ARUE_c13970 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D ARUE_c27700 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D ARUE_c13660 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D ARUE_c13670 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D ARUE_c13650 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D ARUE_c09430 uncharacterized protein y4fB K01173 ENDOG; endonuclease G, mitochondrial D ARUE_113p00380 putative single-strand DNA binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c25550 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_232p01050 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c42940 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D ARUE_c37220 dnaK2; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c20080 danK; chaperone protein Dank K04043 dnaK; molecular chaperone DnaK D ARUE_c34240 dnaK1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c37210 grpE2; protein GrpE K03687 GRPE; molecular chaperone GrpE D ARUE_c20090 grpE1; protein grpE K03687 GRPE; molecular chaperone GrpE D ARUE_c09520 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30260 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30270 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D ARUE_c37200 dnaJ3; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D ARUE_c23890 dnaJ2; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ D ARUE_c26860 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c28660 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c29300 mrp; protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning D ARUE_c22540 ctaB; protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141] D ARUE_c22560 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9] D ARUE_c43360 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:arr02000] D ARUE_c10170 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c35830 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c35820 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c10180 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump D ARUE_c35140 ygaD2; putative multidrug export ATP-binding/permease protein YgaD K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ARUE_c35150 yknV; putative ABC transporter ATP-binding protein YknV K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ARUE_c30190 msbA2; lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D ARUE_c16740 cydD; ATP-binding/permease protein CydD K16014 cydCD; ATP-binding cassette, subfamily C, bacterial CydCD D ARUE_c34050 tlrC; tylosin resistance ATP-binding protein TlrC K18230 tylC; macrolide transport system ATP-binding/permease protein D ARUE_c12760 yfmR; putative ABC transporter ATP-binding protein YfmR K15738 uup; ABC transport system ATP-binding/permease protein D ARUE_c03550 putative ABC transporter, ATP-binding protein K02021 ABC.MR; putative ABC transport system ATP-binding protein D ARUE_c36610 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D ARUE_c36600 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D ARUE_c36590 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D ARUE_c13560 putative ABC-type sulfonate transport system K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_232p01220 putative binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c32360 putative ABC transporter, substrate-binding protein, aliphatic sulfonates family K15553 ssuA; sulfonate transport system substrate-binding protein D ARUE_c13550 ssuC1; putative aliphatic sulfonates transport permease protein SsuC K15554 ssuC; sulfonate transport system permease protein D ARUE_232p01200 putative ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c32340 putative nitrate/sulfonate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D ARUE_c13540 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_232p01210 putative ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c32350 putative nitrate/sulfonate ABC transporter, ATP binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D ARUE_c20500 extracellular solute-binding domain protein K02012 afuA; iron(III) transport system substrate-binding protein D ARUE_c07060 putative Fe(3+)-binding extracellular protein K02012 afuA; iron(III) transport system substrate-binding protein D ARUE_c20490 putative ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein D ARUE_c07050 putative Fe(3+)-transport system, permease protein K02011 afuB; iron(III) transport system permease protein D ARUE_c07040 putative Fe(3+) transport system, ATP binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ARUE_c20480 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D ARUE_c39800 ABC transporter, substrate binding component K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c29680 proX; glycine betaine/choline-binding protein of an ABC-type transport system K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c06120 osmF; putative osmoprotectant uptake system substrate-binding protein OsmF K05845 opuC; osmoprotectant transport system substrate-binding protein D ARUE_c39810 proline/glycine/betaine transporer, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c39820 ABC transporter, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c29690 proZ; ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c29700 proW; ABC-type proline/glycine betaine transport systems, permease component K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c06090 yehY; putative osmoprotectant uptake system permease protein YehY K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c06110 opuBB; choline transport system permease protein OpuBB K05846 opuBD; osmoprotectant transport system permease protein D ARUE_c39830 glycine betaine/carnitine/choline transport ATP-binding protein, OpuCA-like protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c29710 opuCA2; glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c06100 opuCA1; glycine betaine/carnitine/choline transport ATP-binding protein OpuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D ARUE_c31560 tauC2; putative ABC-type nitrate/sulfonate/bicarbonate transporter, permease protein TauC K02050 ABC.SN.P; NitT/TauT family transport system permease protein D ARUE_c31550 tauB2; putative ABC-type nitrate/sulfonate/bicarbonate transporter, ATP-binding protein TauB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ARUE_c27050 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D ARUE_c08820 ugpC1; sn-glycerol-3-phosphate import ATP-bindingprotein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c08710 malE; maltose-binding protein MalE K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D ARUE_c08720 malF; maltose transport system permease protein MalF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D ARUE_c08730 ganQ; putative arabinogalactan oligomer transport system permease protein GanQ K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D ARUE_c18500 putative secreted sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c31620 extracellular solute-binding domain protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c08970 putative extracellular sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c04120 yurO1; putative ABC transporter extracellular-binding protein YurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c17680 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c14530 yurO2; putative ABC transporter extracellular-binding protein YurO K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein D ARUE_c04130 yurN1; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c08960 yurN4; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c18480 putative sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c17690 putative sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c14520 yurN5; putative ABC transporter permease protein YurN K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c31610 msmF; multiple sugar-binding transport system permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein D ARUE_c04140 yurM1; putative ABC transporter permease protein YurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c18490 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c08950 yurM3; putative ABC transporter permease protein YurM K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c31600 msmG; multiple sugar-binding transport system permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c17700 putative sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c14510 putative ABC transporter permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein D ARUE_c04280 aglE; alpha-glucosides-binding extracellular protein AglE K10232 aglE; alpha-glucoside transport system substrate-binding protein D ARUE_c04290 aglF; alpha-glucoside transport system permease protein AglF K10233 aglF; alpha-glucoside transport system permease protein D ARUE_c04300 aglG; alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein D ARUE_c36170 putative ABC transporter-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D ARUE_c36160 putative ABC transporter permease protein K10237 thuF; trehalose/maltose transport system permease protein D ARUE_c36150 putative ABC transporter permease protein K10238 thuG; trehalose/maltose transport system permease protein D ARUE_c05800 putative extracellular solute-binding domain protein K10200 ngcE; N-acetylglucosamine transport system substrate-binding protein D ARUE_c05810 yurN2; putative ABC transporter permease protein YurN K10201 ngcF; N-acetylglucosamine transport system permease protein D ARUE_c05820 yurM2; putative ABC transporter permease protein YurM K10202 ngcG; N-acetylglucosamine transport system permease protein D ARUE_c00860 putative extracellular sugar-binding protein K10240 cebE; cellobiose transport system substrate-binding protein D ARUE_c00850 lacF1; lactose transport system permease protein LacF K10241 cebF; cellobiose transport system permease protein D ARUE_c00840 araQ1; L-arabinose transport system permease protein AraQ K10242 cebG; cellobiose transport system permease protein D ARUE_c42370 putative extracellular sugar-binding protein K17329 dasA; N,N'-diacetylchitobiose transport system substrate-binding protein D ARUE_c42360 putative ABC transporter permease protein K17330 dasB; N,N'-diacetylchitobiose transport system permease protein D ARUE_c42350 putative ABC transporter permease protein y4oR K17331 dasC; N,N'-diacetylchitobiose transport system permease protein D ARUE_c10820 extracellular solute-binding domain protein K17318 lplA; putative aldouronate transport system substrate-binding protein D ARUE_c13720 lplA; putative lipoprotein LplA K17318 lplA; putative aldouronate transport system substrate-binding protein D ARUE_c10800 lplB1; protein LplB K17319 lplB; putative aldouronate transport system permease protein D ARUE_c13700 lplB2; protein LplB K17319 lplB; putative aldouronate transport system permease protein D ARUE_c10810 lplC; protein LplC K17320 lplC; putative aldouronate transport system permease protein D ARUE_c13710 ytcP; putative ABC transporter permease protein YtcP K17320 lplC; putative aldouronate transport system permease protein D ARUE_c11490 sugar-binding extracellular receptor protein of ABC transporter system K10546 chvE; putative multiple sugar transport system substrate-binding protein D ARUE_c05020 chvE; multiple sugar-binding extracellular receptor ChvE K10546 chvE; putative multiple sugar transport system substrate-binding protein D ARUE_c11500 xylH2; xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D ARUE_c05040 xylH1; xylose transport system permease protein XylH K10547 gguB; putative multiple sugar transport system permease protein D ARUE_c11510 araG2; L-arabinose transport ATP-binding protein AraG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c05030 araG1; L-arabinose transport ATP-binding protein AraG K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c08260 rbsB1; D-ribose-binding extracellular protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c20210 rbsB3; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c18200 rbsB2; D-ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein D ARUE_c08280 rbsC1; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c20200 rbsC3; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c18190 rbsC2; ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein D ARUE_c20240 rbsA3; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c08270 rbsA1; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c22780 rbsA4; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c18180 rbsA2; ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D ARUE_c30750 ugpB; sn-glycerol-3-phosphate-binding extracellular protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ARUE_c19290 putative ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D ARUE_c30730 ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19260 ugpA1; sn-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D ARUE_c30740 ugpE; sn-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19250 yesQ2; putative ABC transporter permease protein YesQ K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D ARUE_c19300 ugpC2; sn-glycerol-3-phosphate import ATP-bindingprotein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D ARUE_c34470 yesO4; putative ABC transporter substrate-bindingprotein YesO K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D ARUE_c02370 yesO1; putative ABC transporter substrate-bindingprotein YesO K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D ARUE_c11780 yesO2; putative ABC transporter substrate-binding protein YesO K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D ARUE_c34450 yesO3; putative ABC transporter substrate-bindingprotein YesO K25676 yesO; pectin-derived oligosaccharide transport system substrate-binding protein D ARUE_c34490 yesP3; putative ABC transporter permease protein YesP K25677 yesP; pectin-derived oligosaccharide transport system permease protein D ARUE_c02360 yesP1; putative ABC transporter permease protein YesP K25677 yesP; pectin-derived oligosaccharide transport system permease protein D ARUE_c34440 yesP2; putative ABC transporter permease protein YesP K25677 yesP; pectin-derived oligosaccharide transport system permease protein D ARUE_c34480 yesQ4; putative ABC transporter permease protein YesQ K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D ARUE_c02350 yesQ1; putative ABC transporter permease protein YesQ K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D ARUE_c34430 yesQ3; putative ABC transporter permease protein YesQ K25678 yesQ; pectin-derived oligosaccharide transport system permease protein D ARUE_c11890 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D ARUE_c11910 yufP; putative ABC transporter permease protein YufP K23535 nupB; general nucleoside transport system permease protein D ARUE_c11920 yufQ; putative ABC transporter permease protein YufQ K23536 nupC; general nucleoside transport system permease protein D ARUE_c11900 yufO; putative ABC transporter ATP-binding protein YufO K23537 nupA; general nucleoside transport system ATP-binding protein D ARUE_c31790 putative solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c33890 putative binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c25070 extracellular solute-binding domain protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c04920 putative extracellular sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c19870 extracellular solute-binding protein, family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c06490 extracellular solute-binding domain protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c34990 putative extracellular sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c42240 putative extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c37440 putative extracellular solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c40820 putative extracellular solute-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c06630 putative extracellular sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c32710 extracellular solute-binding domain protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D ARUE_c04930 putative ABC transporter permease protein y4oQ K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c06500 yurN3; putative ABC transporter permease protein YurN K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c06620 putative ABC transporter permease protein y4oQ K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c25060 amyD; putative ABC transporter permease protein AmyD K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c19860 putative ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c33900 putative ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c32700 yurN6; putative ABC transporter permease protein YurN K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c37350 ABC transporter permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c37450 yurN8; putative ABC transporter permease protein YurN K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c31800 lacF2; lactose transport system permease protein LacF K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c42230 ugpA3; sn-glycerol-3-phosphate transport system permease protein UgpA K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c34970 yurN7; putative ABC transporter permease protein YurN K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c40830 putative ABC-type sugar transport system, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein D ARUE_c31810 araQ3; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c06610 putative ABC transporter permease protein y4oR K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c06510 araQ2; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c25050 putative ABC transporter permease protein ORF1 K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c19850 binding-protein-dependent transport systems inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c33910 yurM4; putative ABC transporter permease protein YurM K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c32690 putative ABC transporter permease protein ORF2 K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c37360 araQ4; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c37460 araQ5; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c42220 araQ7; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c34980 yurM5; putative ABC transporter permease protein YurM K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c40840 araQ6; L-arabinose transport system permease protein AraQ K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c04940 ycjP; inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein D ARUE_c21410 putative ABC-type sugar transport system K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D ARUE_c21420 yphD; putative ABC transporter permease protein YphD K02057 ABC.SS.P; simple sugar transport system permease protein D ARUE_c21430 putative ribose/galactose/methyl galactoside import ATP-binding protein 2 K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D ARUE_c01890 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D ARUE_c01900 pstC; phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein D ARUE_c01910 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D ARUE_c01920 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D ARUE_c11410 phnD; phosphate-binding protein of phosphonate ABC transporter PhnD K02044 phnD; phosphonate transport system substrate-binding protein D ARUE_c11390 phnE; putative phosphonates transport system permease protein PhnE K02042 phnE; phosphonate transport system permease protein D ARUE_c11400 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D ARUE_c29390 gluB; glutamate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D ARUE_c29400 glnM1; putative glutamine ABC transporter permease protein GlnM K10006 gluC; glutamate transport system permease protein D ARUE_c29410 gluD; glutamate transport system permease protein GluD K10007 gluD; glutamate transport system permease protein D ARUE_c29380 gluA; glutamate transport ATP-binding protein GluA K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c09840 tcyA; L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein D ARUE_c09830 tcyB; L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein D ARUE_c09820 tcyC1; L-cystine import ATP-binding protein TcyC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c12070 braC; branched-chain amino acid ABC transporter BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein D ARUE_c12120 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D ARUE_c12110 braE; high-affinity branched-chain amino acid transport system permease protein BraE K01998 livM; branched-chain amino acid transport system permease protein D ARUE_c12100 livG; putative branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D ARUE_c12090 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein D ARUE_c05620 argT; lysine-arginine-ornithine-binding extracellular protein ArgT K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_232p01520 amino acid ABC transporter, extracellular amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_c32570 glnH; glutamine-binding extracellular protein GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_c38570 putative ABC transporter, solute binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_c38660 putative ABC transporter, solute binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_c21160 hisJ; ABC-type amino acid transport/signal transduction system, extracellular K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_c28960 putative amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D ARUE_232p01500 yckA1; amino-acid ABC transporter permease protein YckA1 K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c38680 yecS2; inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c32580 glnM2; putative glutamine ABC transporter permease protein GlnM K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c21150 yecS1; inner membrane amino-acid ABC transporter permease protein YecS K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_232p01510 yckA2; amino-acid ABC transporter permease protein YckA2 K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c28970 artQ2; arginine transport system permease proteinArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c05630 artQ1; arginine transport system permease proteinArtQ K02029 ABC.PA.P; polar amino acid transport system permease protein D ARUE_c05640 glnQ1; glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c28980 tcyC2; L-cystine import ATP-binding protein TcyC K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c38670 tcyC3; L-cystine import ATP-binding protein TcyC K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c32590 glnQ3; glutamine transport ATP-binding protein GlnQ K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D ARUE_c29580 oppA; oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D ARUE_c29560 dppB2; dipeptide transport system permease protein DppB K15581 oppB; oligopeptide transport system permease protein D ARUE_c29550 oppC; oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein D ARUE_c29540 gsiA3; glutathione import ATP-binding protein GsiA K10823 oppF; oligopeptide transport system ATP-binding protein D ARUE_c40170 hypothetical protein K13889 gsiB; glutathione transport system substrate-binding protein D ARUE_c40200 putative peptide transport permease protein K13890 gsiC; glutathione transport system permease protein D ARUE_c40190 putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D ARUE_c40180 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D ARUE_c07630 gsiB1; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c07800 gsiB2; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c26740 hbpA; heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_232p01620 calT6; protein CalT6 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c28630 dppA; dipeptide transport protein DppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c20850 putative ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c21220 ddpA; putative D,D-dipeptide-binding extracellular protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D ARUE_c07640 gsiC; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c07790 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_232p01590 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c28620 dppB1; dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c20860 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c21230 putative peptide transport system permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D ARUE_c28610 gsiD2; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c20870 dppC1; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c21240 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c07780 putative peptide import ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_232p01600 appC; oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein D ARUE_c07660 gsiA1; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_232p01610 putative ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c28600 gsiA2; glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c21250 yejF; putative ABC transporter ATP-binding protein YejF K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c20880 putative peptide ABC transporter ATP-binding protein y4tR K02031 ddpD; peptide/nickel transport system ATP-binding protein D ARUE_c07770 appF1; oligopeptide transport ATP-binding proteinAppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ARUE_c20890 appF2; oligopeptide transport ATP-binding proteinAppF K02032 ddpF; peptide/nickel transport system ATP-binding protein D ARUE_c21690 Fe3+-siderophore binding protein, FhuD family K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D ARUE_c21700 Fe3+-hydroxamate ABC transporter, permease subunit K23228 fhuB; ferric hydroxamate transport system permease protein D ARUE_c21680 Fe3+-siderophore ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D ARUE_c05290 Fe3+-siderophore binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D ARUE_c38990 Fe3+-siderophore binding protein, FepB family K25286 fagD; iron-siderophore transport system substrate-binding protein D ARUE_c03590 Fe3+-siderophore ABC transporter, transmembrane subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c05280 Fe3+-siderophore ABC transporter, transmembrane subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c38980 Fe3+-siderophore ABC transporter, permease subunit K23186 fepD; iron-siderophore transport system permease protein D ARUE_c03600 Fe3+-siderophore ABC transporter, transmembrane subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c05270 Fe3+-siderophoreABC transporter, transmembrane subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c38970 Fe3+-siderophore ABC transporter, permease subunit K23187 fepG; iron-siderophore transport system permease protein D ARUE_c03610 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c05260 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c38960 Fe3+-siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D ARUE_c40000 siderophore binding protein, CeuA-like protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D ARUE_c39980 Fe3+-siderophore ABC transporter, permease subunit, CeuC-like protein K25283 yclO; iron-siderophore transport system permease protein D ARUE_c39990 Fe3+-siderophore ABC transporter, permease subunit, CeuB/CeuC-like protein K25284 yclN; iron-siderophore transport system permease protein D ARUE_c39970 Fe3+-siderophore ABC transporter, ATP-binding protein, CeuD-like protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D ARUE_c03570 ABC-type Fe3+-hydroxamate transporter, extracellular iron-siderophore binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D ARUE_c22810 ylmA; putative ABC transporter ATP-binding protein YlmA K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D ARUE_c34100 metal-binding extracellular protein interacting with ABC transporter K11601 mntC; manganese transport system substrate-binding protein D ARUE_c34080 permease component of ABC-type metal cation transporter K11602 mntB; manganese transport system permease protein D ARUE_c34090 ATPase component of ABC-type metal cation transporter K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5] D ARUE_c22700 putative BioY family protein K03523 bioY; biotin transport system substrate-specific component D ARUE_c22680 putative cobalt transport protein K16783 bioN; biotin transport system permease protein D ARUE_c22690 putative ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D ARUE_c38060 putative cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein D ARUE_c38070 ykoD; putative HMP/thiamine import ATP-binding protein YkoD K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D ARUE_c38080 putative integral membrane protein K16925 ykoE; energy-coupling factor transport system permease protein D ARUE_c27890 putative solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D ARUE_c20960 fimA; manganese ABC transporter substrate-binding lipoprotein FimA K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D ARUE_c27870 putative ABC-type Mn2+/Zn2+/Fe2+ transport system, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D ARUE_c27880 mntB2; manganese transport system ATP-binding protein MntB K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D ARUE_c20930 putative ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D ARUE_c24840 putative ABC transporter, integral membrane protein K11051 cylB; multidrug/hemolysin transport system permease protein D ARUE_c24830 yfiL; putative ABC transporter ATP-binding protein YfiL K11050 cylA; multidrug/hemolysin transport system ATP-binding protein D ARUE_c11660 putative ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein D ARUE_c11670 nodJ; nodulation protein J K09694 nodJ; lipooligosaccharide transport system permease protein D ARUE_c11650 nodI1; Nod factor export ATP-binding protein I K09695 nodI; lipooligosaccharide transport system ATP-binding protein D ARUE_c43150 putative ABC transporter, permease protein K09813 hrtB; hemin transport system permease protein D ARUE_c43160 ATPase component of putative ABC transporter K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D ARUE_c31970 putative ABC transporter, permease protein K25147 berB; beta-exotoxin I transport system permease protein D ARUE_c31960 nosF; copper transport ATP-binding protein NosF K25148 berA; beta-exotoxin I transport system ATP-binding protein D ARUE_c26590 ATPase component of ABC-type transport system K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D ARUE_c28110 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D ARUE_c28120 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D ARUE_c36930 putative membrane protein (DUF990 family) K25154 evrC; viologen exporter family transport system permease protein D ARUE_c36940 putative membrane protein (DUF990 family) K25155 evrB; viologen exporter family transport system permease protein D ARUE_c36920 natA; ATP-binding transport protein NatA K25156 evrA; viologen exporter family transport system ATP-binding protein D ARUE_c14630 putative ABC transporter efflux protein, DrrB family K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c22050 putative permease component of ABC transport system K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c22570 putative ABC transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c31910 putative permease protein of ABC-type transport system K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c39940 putative ABC transporter, efflux permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c27350 putative integral membrane transport protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c05090 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c28300 rfbA; O-antigen export system permease protein RfbA K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c43040 putative permease component of ABC-type transport system K01992 ABC-2.P; ABC-2 type transport system permease protein D ARUE_c22580 nodI3; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c31900 ATPase component of putative ABC-type transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c36030 ydbJ; putative ABC transporter ATP-binding protein YdbJ K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c39930 drrA; daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c43050 ATPase component of putative antimicrobial peptides ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c22060 ATPase component of putative multidrug ABC-type transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c19380 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c27210 yhcG2; putative ABC transporter ATP-binding protein YhcG K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c14640 nodI2; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c05080 yhaQ; putative ABC transporter ATP-binding protein YhaQ K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c27360 nodI4; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c28290 rfbB; O-antigen export system ATP-binding protein RfbB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c42880 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D ARUE_c26570 permease protein of ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein D ARUE_c11480 putative ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein D ARUE_c26560 ATPase component of ABC-type antimicrobial peptide transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ARUE_c11470 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ARUE_c34930 ATPase component of ABC-type antimicrobial peptide transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D ARUE_c22630 sufC; putative FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D ARUE_c42470 putative MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump D ARUE_c39170 putative integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D ARUE_c13060 yfiG; putative metabolite transport protein YfiG K06609 iolT; MFS transporter, SP family, major inositol transporter D ARUE_c36800 kgtP4; alpha-ketoglutarate permease KgtP K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D ARUE_c37170 kgtP5; alpha-ketoglutarate permease KgtP K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D ARUE_c06930 kgtP1; alpha-ketoglutarate permease KgtP K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D ARUE_c10360 kgtP2; alpha-ketoglutarate permease KgtP K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D ARUE_c02780 proP1; proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D ARUE_c19080 proP3; proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D ARUE_c05460 proP2; proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D ARUE_c39590 proP4; proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D ARUE_c40470 proP5; proline/betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D ARUE_c42600 shiA8; shikimate transporter ShiA K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D ARUE_c25810 shiA6; shikimate transporter ShiA K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D ARUE_c10590 yfaV; inner membrane transport protein YfaV K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein D ARUE_c41710 benK2; benzoate transport protein K05548 benK; MFS transporter, AAHS family, benzoate transport protein D ARUE_c24090 pcaK; 4-hydroxybenzoate transporter PcaK K26744 vanK; MFS transporter, AAHS family, vanillate permease D ARUE_c36810 yycB2; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D ARUE_c32210 putative major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D ARUE_c19810 yycB1; putative transporter YycB K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D ARUE_c06820 putative major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D ARUE_c08760 putative major facilitator superfamily (MFS) transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D ARUE_c13240 nitrite extrusion protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D ARUE_c14090 ydgK; putative MFS-type transporter YdgK K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D ARUE_c08320 ydhP1; inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D ARUE_c15280 ydhP2; inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D ARUE_c15890 ydhP3; inner membrane transport protein YdhP K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D ARUE_c09360 EmrB/QacA subfamily drug resistance transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D ARUE_c01450 EmrB/QacA subfamily drug resistance transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D ARUE_c40870 putative major facilitator superfamily (MFS) transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D ARUE_c39880 yfmO; multidrug efflux protein YfmO K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D ARUE_c29800 ynfM; inner membrane transport protein YnfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D ARUE_c38160 putative major facilitator superfamily (MFS) transporter K06902 UMF1; MFS transporter, UMF1 family D ARUE_c04580 yaaU; putative metabolite transport protein YaaU K08368 yaaU; MFS transporter, putative metabolite transport protein D ARUE_232p01670 yceI; putative metabolite transport protein YceI K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D ARUE_c11280 yceI1; putative metabolite transport protein YceI K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D ARUE_c35670 yceI2; putative metabolite transport protein YceI K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D ARUE_c40040 ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D ARUE_c02910 hPr2; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c23670 hPr3; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c40050 hPr4; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D ARUE_c30130 PTS system, IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D ARUE_c02920 fruA; PTS system fructose-specific EIIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D ARUE_c40020 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D ARUE_c01700 hPr1; dihydroxyacetone kinase, phosphotransfer subunit/phosphocarrier protein HPr K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D ARUE_c27140 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z D ARUE_c24030 glpF; glycerol uptake facilitator protein GlpF K02440 glpF; glycerol uptake facilitator D ARUE_c32000 putative voltage-gated potassium channel protein K10716 kch; voltage-gated potassium channel D ARUE_c26160 amt1; putative ammonia channel K03320 amt; ammonium transporter, Amt family D ARUE_c35560 amt2; putative ammonia channel K03320 amt; ammonium transporter, Amt family D ARUE_c25000 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D ARUE_c25010 putative von willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog D ARUE_c41530 mscL; large conductance mechanosensitive channelprotein MscL K03282 mscL; large conductance mechanosensitive channel D ARUE_c25470 mscS; putative mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel D ARUE_c29860 putative CorA-like metal ion (Mg2+/Co2+) transporter K03284 corA; magnesium transporter D ARUE_c29890 putative crcB-like protein K06199 crcB; fluoride exporter D ARUE_c29900 putative crcB-like protein K06199 crcB; fluoride exporter D ARUE_c29810 putative membrane protein (DUF1211 family) K24915 TMEM175; TMEM175 potassium channel family protein D ARUE_c19970 putative integral membrane protein (DUF1211) K24915 TMEM175; TMEM175 potassium channel family protein D ARUE_c27900 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c32870 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_232p00620 CBS-pair_CorC_Hly-domain-(transporter associated domain-) containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c32860 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_232p00630 CBS-pair_CorC_Hly-domain-(transporter associated domain-) containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c23840 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c27910 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c20410 hypothetical protein K21449 ata; trimeric autotransporter adhesin D ARUE_c18570 gutA; putative glucitol transport protein GutA K16248 gutA; probable glucitol transport protein GutA D ARUE_c42990 gabP; GABA permease GabP K11735 gabP; GABA permease D ARUE_c07930 cycA1; D-serine/D-alanine/glycine transporter CycA K11737 cycA; D-serine/D-alanine/glycine transporter D ARUE_c39950 cycA2; D-serine/D-alanine/glycine transporter CycA K11737 cycA; D-serine/D-alanine/glycine transporter D ARUE_c39290 ansP2; L-asparagine permease K11738 ansP; L-asparagine permease D ARUE_c34010 ansP1; L-asparagine permease AnsP K11738 ansP; L-asparagine permease D ARUE_c03660 proY; proline-specific permease ProY K16234 hutT; histidine transporter D ARUE_c37910 ybgF; putative amino acid permease YbgF K16235 mmuP; S-methylmethionine transporter D ARUE_c11050 puuP; putrescine importer PuuP K14052 puuP; putrescine importer D ARUE_c05510 putative amino acid permease K20265 gadC; glutamate:GABA antiporter D ARUE_c03850 czcD; putative cation (cobalt-zinc-cadmium) efflux transporter CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D ARUE_232p00430 czcD; cation (cobalt-zinc-cadmium) efflux transporter CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein D ARUE_c41010 putative ZIP zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family D ARUE_c41260 putative integral membrane protein K07238 TC.ZIP; zinc transporter, ZIP family D ARUE_232p00580 putative divalent metal ion transporter K07238 TC.ZIP; zinc transporter, ZIP family D ARUE_c36700 putative small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D ARUE_c36710 putative small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D ARUE_c07590 eamA; putative amino-acid metabolite efflux pump K15268 eamA; O-acetylserine/cysteine efflux transporter D ARUE_c41040 putative integral membrane protein (DMT superfamily) K11939 rhtA; inner membrane transporter RhtA D ARUE_c32160 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D ARUE_c13960 putative membrane protein, DUF606 family K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D ARUE_c42960 UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D ARUE_c02540 ygbN1; inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family D ARUE_c42020 ygbN2; inner membrane permease YgbN K03299 TC.GNTP; gluconate:H+ symporter, GntP family D ARUE_c28740 gnuT; gluconate permease GnuT K03299 TC.GNTP; gluconate:H+ symporter, GntP family D ARUE_c20380 kdgT; 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D ARUE_c14290 ywcA; putative symporter YwcA K14393 actP; cation/acetate symporter D ARUE_c14240 putative sodium:solute symporter family protein K14393 actP; cation/acetate symporter D ARUE_c35220 dctA2; C4-dicarboxylate transport protein DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D ARUE_c15780 dctA1; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein D ARUE_c12900 nhaA; Na(+)/H(+) antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D ARUE_c31640 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D ARUE_c05550 putative sodium/hydrogen exchanger family protein K24160 NHA1; sodium/hydrogen antiporter D ARUE_c38170 putative TrkA-C domain protein K07228 khtT; K+:H+ antiporter subunit KhtT D ARUE_c38180 yhaU; K(+)/H(+) antiporter YhaU K26732 khtU; K+:H+ antiporter subunit KhtU D ARUE_c34640 TrkH-like potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D ARUE_232p00510 TrkH-type potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D ARUE_c34650 potassium transport system dinucleotide-binding component TrkA K03499 trkA; trk/ktr system potassium uptake protein D ARUE_c16900 trkA1; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D ARUE_c16910 trkA2; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein D ARUE_c35400 pbuX; xanthine permease PbuX K24206 uacT; uric acid transporter D ARUE_c03790 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease D ARUE_c35330 pbuG; guanine/hypoxanthine permease PbuG K06901 pbuG; adenine/guanine/hypoxanthine permease D ARUE_c17140 ydcO; inner membrane protein YdcO K05782 benE; benzoate membrane transport protein D ARUE_c02150 putative high-affinity nickel-transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D ARUE_c00550 ybaR; putative sulfate transporter YbaR K03321 TC.SULP; sulfate permease, SulP family D ARUE_c37960 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D ARUE_c19180 TRAP C4-dicarboxylate transport system permease DctM subunit K21393 yiaN; TRAP-type transport system large permease protein D ARUE_c26820 putative anion permease, ArsB/NhaD superfamily K03893 arsB; arsenical pump membrane protein D ARUE_232p00610 putative arsenite efflux pump K03325 ACR3; arsenite transporter D ARUE_c38150 phaAB; putative K(+)/H(+) antiporter subunit A/B K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D ARUE_c38140 putative multisubunit Na+/H+ antiporter, MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D ARUE_c38130 mrpD; Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D ARUE_c38120 putative multisubunit Na+/H+ antiporter, MnhE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D ARUE_c38110 putative multisubunit Na+/H+ antiporter, MnhG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D ARUE_c23100 putative glycosyl transferase / polysaccharide biosynthesis domain protein K16695 wzxC; lipopolysaccharide exporter D ARUE_c43240 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D ARUE_c38540 putative integral membrane permease K13936 mdcF; malonate transporter and related proteins D ARUE_c42090 putative integral membrane permease K13936 mdcF; malonate transporter and related proteins D ARUE_c09570 putative amino-acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D ARUE_c37790 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D ARUE_c03440 azlC; putative azaleucine resistance protein AzlC K26605 azlC; branched chain amino acid efflux pump D ARUE_c03450 putative integral membrane protein K26606 azlD; branched chain amino acid efflux pump D ARUE_c19220 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein D ARUE_c06660 putative 52.8 kDa protein in TAR-I ttuC' 3'region K07793 tctA; putative tricarboxylic transport membrane protein D ARUE_c19230 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein D ARUE_c06670 putative integral membrane protein K07794 tctB; putative tricarboxylic transport membrane protein D ARUE_c06680 yflP; UPF0065 protein YflP K07795 tctC; putative tricarboxylic transport membrane protein D ARUE_c19210 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein D ARUE_c12180 UPF0118 membrane protein K20469 K20469; putative heme transporter D ARUE_c06970 putative integral membrane protein K09125 yhhQ; queuosine precursor transporter D ARUE_c14680 integral membrane protein K22736 VIT; vacuolar iron transporter family protein D ARUE_c10050 putative integral membrane protein K22736 VIT; vacuolar iron transporter family protein D ARUE_c29240 membrane protein K05595 marC; multiple antibiotic resistance protein D ARUE_c16200 ftsW-like protein K03588 ftsW; cell division protein FtsW D ARUE_c06760 hypothetical protein K03641 tolB; TolB protein D ARUE_c34270 ccdA; cytochrome c biogenesis membrane protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D ARUE_232p00540 ccdA; cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D ARUE_232p00690 cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D ARUE_c33050 yveL; putative tyrosine-protein kinase YveL K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D ARUE_c17270 putative nicotinamide mononucleotide transporterPnuC K03811 pnuC; nicotinamide mononucleotide transporter D ARUE_c36490 5-hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D ARUE_c03800 putative copper resistance protein, CopC family K07156 copC; copper resistance protein C D ARUE_232p00400 copC; putative copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:arr02044] D ARUE_c12310 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c30570 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_113p00920 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c30600 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30080 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30610 cpaE; putative flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D ARUE_c34840 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c28200 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c30620 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_113p00830 putative type II/IV secretion system protein,VirB11 -like protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c34830 hypothetical protein K12510 tadB; tight adherence protein B D ARUE_c28190 putative bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D ARUE_c30630 putative bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B D ARUE_c28180 putative type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D ARUE_c30640 putative bacterial type II secretion system protein F domain protein K12511 tadC; tight adherence protein C D ARUE_c16280 putative integral membrane protein K02221 yggT; YggT family protein D ARUE_c23990 putative comEA protein K02237 comEA; competence protein ComEA D ARUE_c23980 hypothetical protein K02238 comEC; competence protein ComEC D ARUE_232p02040 protein, TraG family K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D ARUE_c28450 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D ARUE_c24500 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D ARUE_c31160 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D ARUE_c24490 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D ARUE_c30780 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D ARUE_c26130 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D ARUE_c26180 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D ARUE_c24510 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D ARUE_c43360 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase D ARUE_c23390 tatA; twin-arginine translocation protein, TatA/E K03116 tatA; sec-independent protein translocase protein TatA D ARUE_c29310 putative twin-arginine translocation protein K03117 tatB; sec-independent protein translocase protein TatB D ARUE_c23400 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:arr02042] D ARUE_c27900 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c32870 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_232p00620 CBS-pair_CorC_Hly-domain-(transporter associated domain-) containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c32860 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_232p00630 CBS-pair_CorC_Hly-domain-(transporter associated domain-) containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c23840 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c27910 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D ARUE_c12260 UPF0073 membrane protein K11068 hlyIII; hemolysin III D ARUE_c31850 plcN; Non-hemolytic phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3] D ARUE_232p01330 microbial collagenase K01387 colA; microbial collagenase [EC:3.4.24.3] C 02022 Two-component system [BR:arr02022] D ARUE_c10270 phoR; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c33760 resE; sensor histidine kinase ResE K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D ARUE_c08470 senX; signal-transduction histidine kinase SenX K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D ARUE_c08480 regX2; sensory transduction protein RegX K07776 regX3; two-component system, OmpR family, response regulator RegX3 D ARUE_c31730 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D ARUE_c31720 kdpE; KDP operon transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D ARUE_c28500 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D ARUE_c28510 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D ARUE_c07530 putative signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ARUE_c09550 yycG; sensor histidine kinase YycG K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D ARUE_c09560 mprA2; response regulator MprA K02483 K02483; two-component system, OmpR family, response regulator D ARUE_c07540 mprA1; response regulator MprA K02483 K02483; two-component system, OmpR family, response regulator D ARUE_c10280 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K02483 K02483; two-component system, OmpR family, response regulator D ARUE_c19500 devS; redox sensor histidine kinase response regulator DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D ARUE_c19490 devR; transcriptional regulatory protein devR (dosR) K07695 devR; two-component system, NarL family, response regulator DevR D ARUE_c13600 citS2; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c06690 citS1; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c15770 citS3; sensor protein CitS K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D ARUE_c14270 yehU; inner membrane protein YehU K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D ARUE_c41230 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D ARUE_c28380 pdtaS; putative sensor histidine kinase PdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D ARUE_c17480 pdtaR; putative transcriptional regulatory protein PdtaR K22010 pdtaR; two-component system, response regulator PdtaR D ARUE_c33710 dhkJ; hybrid signal transduction histidine kinase J K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:arr02035] D ARUE_c09840 tcyA; L-cystine-binding protein TcyA K02424 tcyA; L-cystine transport system substrate-binding protein D ARUE_c12310 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c30570 putative type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_113p00920 putative type IV leader peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D ARUE_c30600 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30080 putative Flp pilus assembly protein CpaB family K02279 cpaB; pilus assembly protein CpaB D ARUE_c30610 cpaE; putative flp pilus assembly protein CpaE K02282 cpaE; pilus assembly protein CpaE D ARUE_c34840 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c28200 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_c30620 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D ARUE_113p00830 putative type II/IV secretion system protein,VirB11 -like protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:arr04812] D ARUE_c16240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ARUE_c15790 hypothetical protein K03496 parA; chromosome partitioning protein D ARUE_c43330 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein D ARUE_c15950 putative ParA-family protein K03496 parA; chromosome partitioning protein D ARUE_113p00790 putative ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D ARUE_232p00010 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D ARUE_232p01000 putative partitioning protein, parB-family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ARUE_c43320 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:arr04147] D ARUE_c11990 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D ARUE_c22450 gap1; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c25660 gap2; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D ARUE_c22460 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D ARUE_c17470 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40] D ARUE_c00130 cypB; peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D ARUE_c09520 groL1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c30260 groL2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D ARUE_c37220 dnaK2; chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c20080 danK; chaperone protein Dank K04043 dnaK; molecular chaperone DnaK D ARUE_c34240 dnaK1; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D ARUE_c22510 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D ARUE_c05350 gnl; gluconolactonase Gnl K01053 gnl; gluconolactonase [EC:3.1.1.17] D ARUE_c30180 putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ARUE_c30200 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D ARUE_c31010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D ARUE_c39390 cell division cycle protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase D ARUE_c15970 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c12650 putative long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D ARUE_c22670 putative acetyl-CoA C-acetyltransferase / thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c31070 putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c04390 hypothetical protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c22960 fadI; 3-ketoacyl-CoA thiolase FadI K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12140 fadA; 3-ketoacyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D ARUE_c12530 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D ARUE_c30770 adk1; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c35630 adk2; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_113p00150 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D ARUE_c15490 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D ARUE_c15480 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D ARUE_c39340 fuca; plasma alpha-L-fucosidase Fuca K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D ARUE_c05720 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51] D ARUE_c12150 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6] D ARUE_c08630 glgB; 1,4-alpha-glucan-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D ARUE_c24020 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D ARUE_c16420 glnA1; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c16480 glnA2; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D ARUE_c29020 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D ARUE_c29140 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D ARUE_c26610 serA3; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c18040 serA2; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D ARUE_c11320 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D ARUE_c16600 bfmBC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D ARUE_c28770 etfA; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D ARUE_c22500 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c26140 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D ARUE_c22470 tpiA3; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D ARUE_c08450 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmA K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:arr02048] D ARUE_c29230 hpaIM; modification methylase HpaI K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D ARUE_c10240 mcrB; 5-methylcytosine-specific restriction enzyme B K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D ARUE_c10250 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D ARUE_c06710 addiction module toxin, RelE/StbE K06218 relE; mRNA interferase RelE/StbE D ARUE_c31230 putative stress-responsive transcriptional regulator PspC K03973 pspC; phage shock protein C D ARUE_c20280 Fic/Doc superfamily protein K07341 doc; death on curing protein D ARUE_c16240 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D ARUE_c26490 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c39450 putative glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D ARUE_c26860 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D ARUE_c28660 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:arr04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:arr04090] C 01504 Antimicrobial resistance genes [BR:arr01504] D ARUE_c14670 putative aminoglycoside/hydroxyurea kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D ARUE_c34050 tlrC; tylosin resistance ATP-binding protein TlrC K18230 tylC; macrolide transport system ATP-binding/permease protein D ARUE_c40870 putative major facilitator superfamily (MFS) transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein D ARUE_c28910 putative phosphotransferase K06979 mph; macrolide phosphotransferase D ARUE_c09360 EmrB/QacA subfamily drug resistance transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D ARUE_c16700 putative peptidase family M48 K02172 blaR1; bla regulator protein blaR1 D ARUE_c16710 putative transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D ARUE_c38230 yodJ2; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c30530 yodJ1; putative carboxypeptidase YodJ K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D ARUE_c27460 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ARUE_c14080 hypothetical protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D ARUE_232p00810 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:arr00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:arr03100] D ARUE_c30010 trnA4; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c00090 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c25110 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c25130 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D ARUE_c09910 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c07820 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c25540 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c27740 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D ARUE_c14040 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ARUE_c14050 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D ARUE_c03900 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D ARUE_c03760 trnC1; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ARUE_c17190 trnC2; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D ARUE_c26470 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ARUE_c12790 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D ARUE_c03890 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ARUE_c26460 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D ARUE_c38240 trnG4; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c17170 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c17200 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c25410 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D ARUE_c25610 trnH; tRNA-His K14226 tRNA-His; tRNA His D ARUE_c00080 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D ARUE_c12060 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c26730 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c00320 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c17490 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c22990 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c42970 trnL6; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D ARUE_c01970 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c26690 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c26700 trnK3; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D ARUE_c28830 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c31660 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c14140 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c28840 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met D ARUE_c03910 trnF1; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D ARUE_c35160 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c15870 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c25400 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D ARUE_c07900 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c06320 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c07960 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c07390 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D ARUE_c08860 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c08370 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c31670 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D ARUE_c31170 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D ARUE_c32010 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D ARUE_c17180 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c17210 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c25840 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val D ARUE_c01460 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38810 rrsE; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01500 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c15560 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c08640 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c38860 rrsF; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D ARUE_c01470 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38800 rrlE; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c08650 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c01510 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c38850 rrlF; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c15570 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D ARUE_c01480 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38790 rrfE; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c15580 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c38840 rrfF; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c08660 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D ARUE_c01520 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D ARUE_c25770 gno; gluconate 5-dehydrogenase Gno K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D ARUE_c25760 sorbitol dehydrogenase SORD K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D ARUE_c37180 putative NAD(P)-dependent oxidoreductase, short chain dehydrogenase/reductase family K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276] D ARUE_c24720 NAD/mycothiol-dependent formaldehyde dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D ARUE_c08030 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D ARUE_c02250 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D ARUE_c02280 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D ARUE_c24060 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D ARUE_c21530 putative sugar epimerase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412] D ARUE_c18600 6-phosphogluconate dehydrogenase NAD-binding protein K23245 apnO; D-apionate oxidoisomerase [EC:1.1.1.421] D ARUE_c30450 hypothetical protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D ARUE_c17930 p2ox: pyranose 2-oxidase K26081 carA; C-glycoside oxidase [EC:1.1.3.50] D ARUE_c17720 pyranose 2-oxidase K26081 carA; C-glycoside oxidase [EC:1.1.3.50] D ARUE_c16990 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D ARUE_c20550 2Fe2S-clusters-containing small subunit of putative molybdenum hydroxylase K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D ARUE_113p00040 meqA; quinaldine-4-oxidase, small subunit MeqA K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D ARUE_c20540 FAD-containing medium subunit of putative molybdenum hydroxylase K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D ARUE_113p00050 meqB; quinaldine-4-oxidase, medium subunit MeqB K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D ARUE_113p00060 meqC; quinaldine-4-oxidase, large subunit MeqC K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D ARUE_c32540 putative FAD-dependent oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D ARUE_c41650 putative NAD(P) dependent dehydrogenase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D ARUE_c05660 FAD-dependent oxidoreductase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25] D ARUE_c13200 lpdA; NAD(P)H dehydrogenase (quinone) K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D ARUE_c15400 qor; quinone oxidoreductase Qor K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D ARUE_c35840 putative acyl-carrier-protein phosphodiesterase,or NAD(P)H dehydrogenase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D ARUE_c20740 gor; glutathione reductase Gor K17883 mtr; mycothione reductase [EC:1.8.1.15] D ARUE_c25700 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D ARUE_c17070 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D ARUE_c00590 yqjG; uncharacterized protein YqjG K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D ARUE_c06000 ydbD; putative manganese catalase YdbD K07217 ydbD; manganese catalase [EC:1.11.1.6] D ARUE_c05530 putative non-heme haloperoxidase, BpoA2-like protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D ARUE_c35860 putative non-heme haloperoxidase, BpoA2-like protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D ARUE_c26720 putative peroxiredoxin (PRX), BCP subfamily K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ARUE_c36380 putative peroxiredoxin (PRX), BCP subfamily K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D ARUE_c16560 putative osmotically inducible protein (OsmC) K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D ARUE_c11870 OsmC family stress protein or peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D ARUE_c25860 putative peroxiredoxin, AhpE-like protein K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D ARUE_c29760 pirin-like protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D ARUE_113p00080 meqE; 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase MeqE K21821 hod; 3-hydroxy-2-methylquinolin-4-one 2,4-dioxygenase [EC:1.13.11.48] D ARUE_c31570 tauD2; putative taurine dioxygenase TauD K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D ARUE_c07840 hmp; flavohemoprotein Hmp K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D ARUE_232p00800 merA; putative mercuric reductase MerA K00520 merA; mercuric reductase [EC:1.16.1.1] D ARUE_c32150 fprA1; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D ARUE_c32240 fprA2; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D ARUE_c24710 putative glutaredoxin-like protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D ARUE_c37660 arsC3; putative arsenate reductase (ArsC) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D ARUE_c37630 arsC2; putative arsenate reductase (ArsC) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D ARUE_c22340 tam; trans-aconitate 2-methyltransferase Tam K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D ARUE_c31340 acetyltransferase, GNAT family protein K15520 mshD; mycothiol synthase [EC:2.3.1.189] D ARUE_c35120 putative A-factor biosynthesis repeat family protein K22463 afsA; 2-oxo-3-(phosphooxy)propyl 3-oxoalkanoate synthase [EC:2.3.1.277] D ARUE_c35290 putative N-acyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-] D ARUE_c21510 putative 3-oxoacyl-[ACP] synthase III K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20] D ARUE_c30420 putative glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D ARUE_c01120 putative glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D ARUE_c17440 putative prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D ARUE_232p00220 putative prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D ARUE_c27720 putative thiamine biosynthesis lipoprotein, ApbEfamily K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D ARUE_c42630 putative dihydroxyacetone kinase K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210] D ARUE_c10550 putative dihydroxyacetone kinase K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210] D ARUE_c18640 putative dihydroxyacetone kinase K20902 derK; D-erythrulose 4-kinase [EC:2.7.1.210] D ARUE_c04100 putative sugar kinase PfkB/FrlD K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D ARUE_c20360 putative ygbK domain protein K23247 oiaK; 3-oxoisoapionate kinase [EC:2.7.1.231] D ARUE_c26330 putative dihydroxyacetone kinase family protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D ARUE_c20270 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D ARUE_c16430 glnE; glutamate-ammonia-ligase adenylyltransferase GlnE K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D ARUE_c01790 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D ARUE_c33450 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D ARUE_c03840 pps; putative phosphoenolpyruvate synthase Pps K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6] D ARUE_c42770 yfdE2; uncharacterized protein YfdE K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D ARUE_c35920 yfdE1; uncharacterized protein YfdE K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D ARUE_c37620 arsC1; putative arsenate reductase (ArsC) K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2] D ARUE_c16000 putative esterase/lipase, alpha/beta-hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D ARUE_c16010 putative esterase/lipase, alpha/beta-hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D ARUE_c07200 UPF0189 protein in non 5'region K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D ARUE_c18550 hypothetical protein K23246 apnL; D-apionolactonase [EC:3.1.1.115] D ARUE_113p00250 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ARUE_c42710 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ARUE_c41700 putative thioesterase family domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ARUE_c10190 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D ARUE_c19280 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D ARUE_c05190 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D ARUE_c33870 hypothetical protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D ARUE_c09030 phosphoglycerate mutase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D ARUE_c29250 putative PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D ARUE_c07560 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D ARUE_232p01230 putative arylsulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6] D ARUE_c12720 yabD; putative deoxyribonuclease YabD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D ARUE_232p01080 micrococcal nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D ARUE_c27430 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D ARUE_c13800 hypothetical protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97] D ARUE_c11770 putative glycosyl hydrolase, family 43 K06113 abnA; arabinan endo-1,5-alpha-L-arabinosidase [EC:3.2.1.99] D ARUE_c22030 putative class C beta-lactamase/penicillin binding protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] D ARUE_c42040 dan; D-aminoacylase Dan K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81] D ARUE_c23490 def2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D ARUE_c25620 def3; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88] D ARUE_c17230 def1; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88] D ARUE_c40890 yjeA; uncharacterized protein YjeA K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D ARUE_c12230 uncharacterized protein, LmbE-like protein K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D ARUE_c08560 putative carbon-nitrogen hydrolase, nitrilase superfamily K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D ARUE_c35350 metallo-dependent hydrolase, amidohydrolase superfamily K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D ARUE_c28550 yeaC4; uncharacterized protein YeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ARUE_c25040 yeaC3; uncharacterized protein YeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ARUE_c12710 yeaC1; uncharacterized protein YeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ARUE_c13400 yeaC2; uncharacterized protein YeaC K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D ARUE_c20370 ribulosebisphosphate carboxylase-like protein K01559 oiaT; 3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase [EC:3.7.1.28] D ARUE_c11160 hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D ARUE_c21520 putative hydrolase/AMP-binding domain protein K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1] D ARUE_c18610 hypothetical protein K23248 oiaC; 3-oxoisoapionate decarboxylase [EC:4.1.1.120] D ARUE_c09020 putative carbohydrate kinase family protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136] D ARUE_c30490 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D ARUE_c06600 inulin fructotransferase K25596 E4.2.1.178; difructose-dianhydride-III synthase [EC:4.2.1.178] D ARUE_c32170 hyaluronate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1] D ARUE_c06640 inulin fructotransferase K10677 E4.2.2.17; inulin fructotransferase (DFA-I-forming) [EC:4.2.2.17] D ARUE_c20310 oxd; phenylacetaldoxime dehydratase Oxd K13028 oxdA; aliphatic aldoxime dehydratase [EC:4.8.1.2] D ARUE_c20230 hypothetical protein K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31] D ARUE_c39330 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D ARUE_c38470 putative rhamnose epimerase, DUF718 superfamily protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D ARUE_c10600 tpiA1; triosephosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33] D ARUE_c18620 tpiA2; triosephosphate isomerase K21910 eryH; L-erythrulose 1-phosphate isomerase [EC:5.3.1.33] D ARUE_c21030 putative acid-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D ARUE_c23240 cysS2; putative cysteinyl-tRNA synthetase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D ARUE_232p00780 putative copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D ARUE_c37480 putative cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D ARUE_232p00560 putative heavy metal-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] D ARUE_232p00710 putative heavy metal-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-] C 99981 Carbohydrate metabolism D ARUE_c21360 iolH; protein IolH K06605 iolH; myo-inositol catabolism protein IolH D ARUE_c34630 acuC; acetoin utilization protein AcuC K04768 acuC; acetoin utilization protein AcuC D ARUE_c10900 beta-glucosidase-like extracellular glycosyl hydrolase K17641 bxlA; beta-xylosidase D ARUE_c18720 bglX2; extracellular beta-glucosidase BglX K17641 bxlA; beta-xylosidase D ARUE_c04090 frlB; putative glucosamine-fructose-6-phosphate aminotransferase / fructose lysine 6-phosphate deglycase frlB K19510 gfrF; fructoselysine-6-phosphate deglycase C 99982 Energy metabolism D ARUE_c09780 fdhD; protein FdhD K02379 fdhD; FdhD protein D ARUE_c12890 SUF system FeS assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D ARUE_c28780 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit D ARUE_c02300 hypothetical protein K09165 K09165; dodecin C 99983 Lipid metabolism D ARUE_c24000 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D ARUE_c24950 nrdI; protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D ARUE_c03400 metalloprotein, glyoxylase/bleomycin resistanceprotein/type I ring-cleaving dioxygenases superfamily K08234 yaeR; glyoxylase I family protein D ARUE_c16260 hypothetical protein K06997 yggS; PLP dependent protein D ARUE_c33950 putative N-acetyltransferase K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D ARUE_c31680 putative LysM domain protein K21687 rpfA; resuscitation-promoting factor RpfA D ARUE_c12730 putative secreted protein K21688 rpfB; resuscitation-promoting factor RpfB D ARUE_c28270 putative integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism D ARUE_c41610 putative chromate reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D ARUE_c42490 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase D ARUE_c11450 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase D ARUE_c13940 phospholipase/carboxylesterase family protein, alpha/beta-hydrolase fold protein K06999 K06999; phospholipase/carboxylesterase D ARUE_c03010 putative lipase/carboxylesterase, alpha/beta hydrolase fold protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription D ARUE_c09510 putative cold shock protein K03704 cspA; cold shock protein D ARUE_c11090 cspA; putative cold shock protein A K03704 cspA; cold shock protein D ARUE_c27450 csp; cold shock protein Csp K03704 cspA; cold shock protein D ARUE_c21580 scoF; cold shock protein ScoF K03704 cspA; cold shock protein D ARUE_c10650 tex; protein Tex K06959 tex; protein Tex C 99974 Translation D ARUE_c19470 ribonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D ARUE_c03320 hypothetical protein K03668 hslJ; heat shock protein HslJ D ARUE_c27290 clpS; ATP-dependent Clp protease adapter proteinClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D ARUE_c25390 tig; trigger factor Tig K03545 tig; trigger factor D ARUE_c02110 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D ARUE_c02120 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein D ARUE_c02130 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D ARUE_c02140 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein D ARUE_c28090 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D ARUE_113p00560 putative glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH D ARUE_c24960 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D ARUE_232p01040 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH D ARUE_c25970 hypothetical protein K07391 comM; magnesium chelatase family protein D ARUE_c34260 putative cytochrome c biogenesis membrane protein, ResB-like family K07399 resB; cytochrome c biogenesis protein D ARUE_232p00480 cytochrome c biogenesis membrane protein K07399 resB; cytochrome c biogenesis protein D ARUE_c35320 XdhC-like protein K07402 xdhC; xanthine dehydrogenase accessory factor D ARUE_c20570 XdhC-like protein K07402 xdhC; xanthine dehydrogenase accessory factor D ARUE_113p00030 putative XdhC protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D ARUE_232p01910 hypothetical protein K07445 K07445; putative DNA methylase D ARUE_c29610 rmuC; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC D ARUE_c25980 hypothetical protein K07460 yraN; putative endonuclease D ARUE_c25960 hypothetical protein K04096 smf; DNA processing protein D ARUE_232p00940 hypothetical protein K04096 smf; DNA processing protein D ARUE_c24400 AAA domain-containing protein K07478 ycaJ; putative ATPase D ARUE_232p01110 transposase K07483 K07483; transposase D ARUE_232p01030 transposase K07486 K07486; transposase D ARUE_232p01100 insK; putative transposase InsK for insertion sequence element IS150 K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D ARUE_c28810 hypothetical protein K03969 pspA; phage shock protein A B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D ARUE_c26920 aroP; aromatic amino acid transport protein AroP K03293 TC.AAT; amino acid transporter, AAT family D ARUE_c11140 putative transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D ARUE_c11560 yhdG1; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D ARUE_c32100 yhdG2; putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D ARUE_c17160 yfnA1; putative amino acid permease YfnA K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D ARUE_c26760 putative cation/multidrug efflux pump, AcrB family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D ARUE_c13610 citN; citrate transporter CitN K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D ARUE_c00950 yclF; putative transporter YclF K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D ARUE_c22150 pit2; putative low-affinity inorganic phosphate transporter Pit K03306 TC.PIT; inorganic phosphate transporter, PiT family D ARUE_c01930 pit1; putative low-affinity inorganic phosphate transporter Pit K03306 TC.PIT; inorganic phosphate transporter, PiT family D ARUE_c10090 putative sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D ARUE_c00540 yocS; putative sodium-dependent transporter YocS K03453 TC.BASS; bile acid:Na+ symporter, BASS family D ARUE_c35250 pucI; putative allantoin permease PucI K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D ARUE_c41500 yxlA; putative purine-cytosine permease YxlA K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family D ARUE_c40920 putative cytosine/purine/uracil/thiamine/allantoin permease family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family C 99978 Cell growth D ARUE_c43350 putative jag-like protein K06346 jag; spoIIIJ-associated protein D ARUE_c20780 spoVK; stage V sporulation protein K K06413 spoVK; stage V sporulation protein K C 99993 Cell motility C 99995 Signaling proteins D ARUE_c07990 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein D ARUE_c29520 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D ARUE_c23860 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D ARUE_c12280 ylaK; uncharacterized protein YlaK K07175 phoH2; PhoH-like ATPase D ARUE_c32030 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D ARUE_c00870 acm1; lysozyme M1 K07273 acm; lysozyme C 99994 Others D ARUE_c08460 phoU; phosphate transport system protein PhoU K02039 phoU; phosphate transport system protein D ARUE_c22280 hypothetical protein K05794 terC; tellurite resistance protein TerC D ARUE_c11020 hypothetical protein K05794 terC; tellurite resistance protein TerC D ARUE_c10200 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D ARUE_c05400 putative oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D ARUE_c11080 putative flavoprotein K07222 K07222; putative flavoprotein involved in K+ transport D ARUE_c30230 putative flavoprotein oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D ARUE_c12620 hypothetical protein K26994 sdpA; sporulation delaying protein A D ARUE_c12610 yitO; uncharacterized protein YitO K26995 sdpB; sporulation delaying protein B D ARUE_c12630 hypothetical protein K26997 sdpC; cannibalism toxin, SdpC family B B 09194 Poorly characterized C 99996 General function prediction only D ARUE_c19800 mviM; virulence factor MviM K03810 mviM; virulence factor D ARUE_c14300 yshC; uncharacterized protein YshC K04477 ycdX; putative hydrolase D ARUE_c34780 yprA; putative ATP-dependent helicase YprA K06877 K06877; DEAD/DEAH box helicase domain-containing protein D ARUE_c25480 glbO; group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D ARUE_c13280 ydfJ; membrane protein YdfJ K06994 K06994; putative drug exporter of the RND superfamily D ARUE_c37720 putative membrane protein K06994 K06994; putative drug exporter of the RND superfamily D ARUE_c35090 mmpL; putative membrane protein MmpL K06994 K06994; putative drug exporter of the RND superfamily D ARUE_c38780 hypothetical protein K07001 K07001; NTE family protein D ARUE_c26480 putative haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D ARUE_c22600 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D ARUE_c22610 sufD; putative FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D ARUE_c11750 putative ribonuclease BN-like family K07058 K07058; membrane protein D ARUE_c38370 YihY family protein K07058 K07058; membrane protein D ARUE_c26980 hypothetical protein K07100 K07100; putative phosphoribosyl transferase D ARUE_c17110 sufE-like protein K02426 sufE; cysteine desulfuration protein SufE D ARUE_c34760 hypothetical protein K07146 K07146; UPF0176 protein D ARUE_c23560 putative glyoxalase family protein K04750 phnB; PhnB protein D ARUE_c12770 hypothetical protein K04750 phnB; PhnB protein D ARUE_c01740 putative glyoxalase family protein K04750 phnB; PhnB protein D ARUE_c40960 putative phosphatase K15640 K15640; uncharacterized phosphatase D ARUE_232p00470 hypothetical protein K02351 K02351; putative membrane protein D ARUE_c27230 membrane protein K03975 dedA; membrane-associated protein D ARUE_c07190 membrane protein DedA family K03975 dedA; membrane-associated protein D ARUE_c11950 membrane protein DedA family K03975 dedA; membrane-associated protein D ARUE_c11960 membrane protein DedA family K03975 dedA; membrane-associated protein D ARUE_c41310 membrane protein DedA family K03975 dedA; membrane-associated protein D ARUE_c07700 yhgE; uncharacterized protein YhgE K01421 yhgE; putative membrane protein D ARUE_c27160 putative integral membrane protein K00389 yidH; putative membrane protein D ARUE_c40390 hypothetical protein K08972 K08972; putative membrane protein D ARUE_c01420 putative bacterial membrane flanked domain protein K08981 K08981; putative membrane protein D ARUE_c02560 putative membrane protein K08987 K08987; putative membrane protein D ARUE_c39070 putative SEC-C motif domain protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D ARUE_c04380 putative ankyrin-containing lipoprotein K06867 K06867; uncharacterized protein D ARUE_c31280 putative ankyrin repeat protein K06867 K06867; uncharacterized protein D ARUE_c12250 yyaL; uncharacterized protein YyaL K06888 K06888; uncharacterized protein D ARUE_232p01740 hydrolase family protein K06889 K06889; uncharacterized protein D ARUE_c00700 hypothetical protein K06889 K06889; uncharacterized protein D ARUE_c17090 hypothetical protein K06889 K06889; uncharacterized protein D ARUE_c05760 putative CoA binding domain protein K06929 K06929; uncharacterized protein D ARUE_c26060 hypothetical protein K06960 K06960; uncharacterized protein D ARUE_c02590 hypothetical protein K06975 K06975; uncharacterized protein D ARUE_c14600 putative acetyltransferase K06976 K06976; uncharacterized protein D ARUE_c21090 hypothetical protein K06995 K06995; uncharacterized protein D ARUE_c07950 cfp30B: 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D ARUE_c31880 putative glyoxalase family protein K06996 K06996; uncharacterized protein D ARUE_c41660 cfp30B: 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D ARUE_c36530 cfp30B: 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D ARUE_c36540 cfp30B: 27 kDa antigen Cfp30B K06996 K06996; uncharacterized protein D ARUE_c19520 pyridoxine 5'-phosphate oxidase-like protein K07005 K07005; uncharacterized protein D ARUE_c08770 hypothetical protein K07005 K07005; uncharacterized protein D ARUE_c19340 hypothetical protein K07005 K07005; uncharacterized protein D ARUE_c19450 hypothetical protein K07005 K07005; uncharacterized protein D ARUE_c19510 hypothetical protein K07005 K07005; uncharacterized protein D ARUE_c19590 hypothetical protein K07005 K07005; uncharacterized protein D ARUE_c36580 pyridoxine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein D ARUE_c27410 hypothetical protein K07018 K07018; uncharacterized protein D ARUE_c22010 alpha/beta hydrolase fold protein, dienelactone hydrolase family K07020 K07020; uncharacterized protein D ARUE_c02570 putative glyoxalase family protein K07032 K07032; uncharacterized protein D ARUE_c32970 hypothetical protein K07032 K07032; uncharacterized protein D ARUE_c10870 putative glyoxalase family protein K07032 K07032; uncharacterized protein D ARUE_c08230 amidohydrolase family protein K07045 K07045; uncharacterized protein D ARUE_c09140 amidohydrolase family protein K07045 K07045; uncharacterized protein D ARUE_c22650 putative zinc metallopeptidase family protein K07054 K07054; uncharacterized protein D ARUE_c19010 hypothetical protein K07068 K07068; uncharacterized protein D ARUE_c18970 putative nucleic-acid-binding protein containinga Zn-ribbon K07068 K07068; uncharacterized protein D ARUE_c16540 hypothetical protein K07071 K07071; uncharacterized protein D ARUE_c06950 epimerase family protein K07071 K07071; uncharacterized protein D ARUE_c23750 hypothetical protein K07077 K07077; uncharacterized protein D ARUE_c06900 putative TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D ARUE_232p00280 hypothetical protein K07090 K07090; uncharacterized protein D ARUE_c04000 putative integral membrane protein K07090 K07090; uncharacterized protein D ARUE_c14660 UPF0721 transmembrane protein ORF9 K07090 K07090; uncharacterized protein D ARUE_c22820 putative integral membrane protein K07090 K07090; uncharacterized protein D ARUE_c32620 hypothetical protein K07093 K07093; uncharacterized protein D ARUE_c35080 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein D ARUE_c43180 ywnB; uncharacterized protein YwnB K07118 K07118; uncharacterized protein D ARUE_c02690 oxidoreductase, short-chain dehydrogenase/reductase family K07124 K07124; uncharacterized protein D ARUE_c39420 putative oxidoreductase K07124 K07124; uncharacterized protein D ARUE_c07280 hypothetical protein K07149 K07149; uncharacterized protein D ARUE_c25680 hypothetical protein K07164 K07164; uncharacterized protein D ARUE_c43370 hypothetical protein K08998 K08998; uncharacterized protein D ARUE_c15930 hypothetical protein K08999 K08999; uncharacterized protein D ARUE_c03960 hypothetical protein K09004 K09004; uncharacterized protein D ARUE_c12010 hypothetical protein K09009 K09009; uncharacterized protein D ARUE_c28850 hypothetical protein K09118 K09118; uncharacterized protein D ARUE_c26810 hypothetical protein K09164 K09164; uncharacterized protein D ARUE_c38640 hypothetical protein K09164 K09164; uncharacterized protein D ARUE_c07100 hypothetical protein K09164 K09164; uncharacterized protein D ARUE_c01410 putative integral membrane protein K09167 K09167; uncharacterized protein D ARUE_c33410 hypothetical protein K09702 K09702; uncharacterized protein D ARUE_c10230 hypothetical protein K09702 K09702; uncharacterized protein D ARUE_232p01640 hypothetical protein K09703 K09703; uncharacterized protein D ARUE_c05910 hypothetical protein K09764 K09764; uncharacterized protein D ARUE_c17940 hypothetical protein K09780 K09780; uncharacterized protein D ARUE_c14580 hypothetical protein K09780 K09780; uncharacterized protein D ARUE_c20820 yedI; inner membrane protein YedI K09781 K09781; uncharacterized protein D ARUE_c12520 hypothetical protein K09791 K09791; uncharacterized protein D ARUE_c39680 hypothetical protein K09793 K09793; uncharacterized protein D ARUE_c15320 hypothetical protein K09807 K09807; uncharacterized protein D ARUE_c25670 hypothetical protein K09861 K09861; uncharacterized protein D ARUE_c28460 ycaQ; uncharacterized protein ycaQ K09927 K09927; uncharacterized protein D ARUE_c42480 hypothetical protein K09932 K09932; uncharacterized protein D ARUE_c23920 hypothetical protein K09940 K09940; uncharacterized protein D ARUE_c35270 hypothetical protein K09946 K09946; uncharacterized protein D ARUE_c34870 hypothetical protein K09946 K09946; uncharacterized protein D ARUE_c32110 hypothetical protein K09959 K09959; uncharacterized protein D ARUE_c12050 acetyltransferase, GNAT family protein K09964 K09964; uncharacterized protein D ARUE_c01820 hypothetical protein K09967 K09967; uncharacterized protein D ARUE_c01830 hypothetical protein K09967 K09967; uncharacterized protein D ARUE_c36690 hypothetical protein K09975 K09975; uncharacterized protein D ARUE_c14490 hypothetical protein K09992 K09992; uncharacterized protein D ARUE_c01940 hypothetical protein K07220 K07220; uncharacterized protein D ARUE_c16960 hypothetical protein K07586 ygaC; uncharacterized protein D ARUE_c14720 hypothetical protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 29, 2024