+D GENES KO #

  KEGG Orthology (KO) - Blattabacterium sp. (Mastotermes darwiniensis)

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:bmm00010] D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MADAR_323 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:bmm00020] D MADAR_261 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MADAR_586 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MADAR_343 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MADAR_041 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MADAR_257 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:bmm00030] D MADAR_080 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D MADAR_134 tktB; Transketolase B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MADAR_135 dxs; DXP synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MADAR_400 fsaB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D MADAR_322 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D MADAR_221 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions D MADAR_080 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:bmm00051] D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MADAR_322 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism D MADAR_328 glgA; glycogen synthase-related protein K00703 glgA; starch synthase [EC:2.4.1.21] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bmm00520] D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00620 Pyruvate metabolism [PATH:bmm00620] D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D MADAR_142 maeB; Malic enzyme, NADP-dependent K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MADAR_257 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bmm00630] D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MADAR_261 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D MADAR_586 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:bmm00640] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:bmm00650] D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00660 C5-Branched dibasic acid metabolism D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:bmm00190] D MADAR_420 ndh; putative type II NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MADAR_146 ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] D MADAR_145 ccoQ; ccoQ cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D MADAR_144 ccoP; ccoP cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D MADAR_279 atpA; ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MADAR_539 atpD; ATP synthase F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MADAR_278 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MADAR_280 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D MADAR_538 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MADAR_281 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MADAR_282 atpE; ATP synthase F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MADAR_004 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:bmm00680] D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] C 00920 Sulfur metabolism [PATH:bmm00920] D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MADAR_194 phosphoesterase domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D MADAR_342 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D MADAR_336 cysJ; sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D MADAR_335 cysI; sulfite reductase (NADPH) hemoprotein subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D MADAR_338 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:bmm00061] D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D MADAR_534 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MADAR_501 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:bmm00561] D MADAR_183 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:bmm00564] D MADAR_182 glpA; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MADAR_391 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D MADAR_253 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MADAR_390 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:bmm00230] D MADAR_221 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D MADAR_203 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D MADAR_205 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D MADAR_210 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D MADAR_206 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D MADAR_209 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D MADAR_208 purC; Phosphoribosylamidoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D MADAR_211 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D MADAR_108 pnp; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D MADAR_452 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MADAR_202 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D MADAR_319 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MADAR_212 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:bmm00240] D MADAR_298 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MADAR_299 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MADAR_234 pyrD; dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D MADAR_233 pyrF; bifunctional orotate phosphoribosyltransferase/orotidine 5'-phosphate decarboxylase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23] D MADAR_492 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MADAR_395 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D MADAR_547 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D MADAR_086 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MADAR_227 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D MADAR_p001 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MADAR_222 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:bmm00250] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MADAR_212 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D MADAR_211 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D MADAR_298 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MADAR_299 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:bmm00260] D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D MADAR_253 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:bmm00270] D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D MADAR_338 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D MADAR_498 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D MADAR_078 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:bmm00280] D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bmm00290] D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:bmm00300] D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MADAR_404 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MADAR_272 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MADAR_191 dapD; 2, 3, 4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_128 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D MADAR_075 tyrB; aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:bmm00310] D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:bmm00220] D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_054 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D MADAR_301 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_055 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:bmm00330] D MADAR_086 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D MADAR_545 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D MADAR_546 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:bmm00340] D MADAR_157 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D MADAR_164 hisI; bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D MADAR_162 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D MADAR_161 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D MADAR_163 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D MADAR_160 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MADAR_158 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:bmm00350] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:bmm00360] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bmm00400] D MADAR_217 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D MADAR_529 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D MADAR_154 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D MADAR_137 aroA; 5-enolpyruvyl shikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D MADAR_428 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D MADAR_077 phospho-2-dehydro-3-deoxyheptonate aldolase (aroG)/chorismate mutase (pheA) K04516 AROA1; chorismate mutase [EC:5.4.99.5] D MADAR_076 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D MADAR_074 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D MADAR_037 phnP; metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:bmm00450] D MADAR_498 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D MADAR_578 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D MADAR_560 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism C 00470 D-Amino acid metabolism [PATH:bmm00470] D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MADAR_141 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MADAR_128 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism D MADAR_343 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:bmm00540] D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D MADAR_412 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bmm00541] D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] C 00550 Peptidoglycan biosynthesis [PATH:bmm00550] D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MADAR_116 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:bmm00552] D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:bmm00543] D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:bmm00730] D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MADAR_021 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:bmm00740] D MADAR_058 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D MADAR_268 ribE; riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D MADAR_536 ribC; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D MADAR_540 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] C 00750 Vitamin B6 metabolism [PATH:bmm00750] D MADAR_555 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D MADAR_588 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] C 00760 Nicotinate and nicotinamide metabolism [PATH:bmm00760] D MADAR_406 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D MADAR_108 pnp; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D MADAR_286 nadE; NH(3)-dependent NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D MADAR_526 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:bmm00770] D MADAR_480 yigI; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D MADAR_330 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D MADAR_417 coaE; putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D MADAR_110 acpT; putative phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:bmm00780] D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MADAR_393 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:bmm00785] D MADAR_084 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D MADAR_198 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MADAR_041 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:bmm00790] D MADAR_285 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D MADAR_325 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D MADAR_510 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D MADAR_173 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MADAR_431 folC; putative folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D MADAR_058 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D MADAR_424 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D MADAR_165 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] C 00670 One carbon pool by folate [PATH:bmm00670] D MADAR_173 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MADAR_166 folD; putative methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MADAR_205 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MADAR_553 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MADAR_222 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D MADAR_169 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:bmm00860] D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MADAR_288 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D MADAR_291 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D MADAR_337 cysG; siroheme synthase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bmm00130] D MADAR_421 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2] D MADAR_549 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D MADAR_344 menE; putative O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D MADAR_348 menB; 1,4-Dihydroxy-2-naphthoyl-CoA (DHNA-CoA) synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D MADAR_422 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D MADAR_347 menA; 1,4-Dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:bmm00900] D MADAR_423 idi; putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D MADAR_314 ispB; polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D MADAR_134 tktB; Transketolase B K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MADAR_135 dxs; DXP synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D MADAR_421 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:bmm00261] D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MADAR_404 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MADAR_272 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00401 Novobiocin biosynthesis [PATH:bmm00401] D MADAR_076 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D MADAR_534 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D MADAR_078 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:bmm03020] D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:bmm03010] D MADAR_304 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MADAR_386 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MADAR_372 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MADAR_354 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MADAR_361 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MADAR_070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MADAR_381 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MADAR_364 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MADAR_387 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MADAR_379 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MADAR_355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MADAR_382 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MADAR_356 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MADAR_365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MADAR_504 rpsO; putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MADAR_093 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MADAR_369 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MADAR_071 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MADAR_374 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MADAR_140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MADAR_470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MADAR_437 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MADAR_375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MADAR_378 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MADAR_377 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MADAR_366 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MADAR_363 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MADAR_435 rplL; 50S ribosomal protein L7+L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MADAR_072 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MADAR_436 rplJ; putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MADAR_438 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MADAR_388 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MADAR_368 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MADAR_360 rplO; putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MADAR_371 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MADAR_352 rplQ; putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MADAR_362 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MADAR_454 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MADAR_188 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MADAR_577 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MADAR_373 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MADAR_376 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MADAR_367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MADAR_220 rplY; putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25 D MADAR_576 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MADAR_247 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MADAR_370 rhlE; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MADAR_500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MADAR_236 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MADAR_248 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MADAR_569 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MADAR_187 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MADAR_357 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:bmm00970] D MADAR_310 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MADAR_575 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_507 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_564 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_029 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_321 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MADAR_057 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MADAR_326 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MADAR_092 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MADAR_139 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MADAR_450 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MADAR_444 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MADAR_089 trnH; tRNA-His K14226 tRNA-His; tRNA His D MADAR_311 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MADAR_226 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_262 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_273 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_451 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_155 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MADAR_242 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_556 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_574 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_522 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MADAR_028 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MADAR_320 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MADAR_064 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_244 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_027 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_443 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MADAR_446 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MADAR_441 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MADAR_445 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MADAR_430 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D MADAR_471 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MADAR_553 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:bmm03060] D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MADAR_396 ffs; signal recognition particle RNA K01983 ffs; SRP RNA D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC D MADAR_271 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MADAR_447 lspA; putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:bmm04122] D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MADAR_274 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:bmm03018] D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MADAR_462 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MADAR_193 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:bmm03030] D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MADAR_456 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MADAR_081 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MADAR_229 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:bmm03410] D MADAR_265 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MADAR_156 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:bmm03420] D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:bmm03430] D MADAR_449 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MADAR_269 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:bmm03440] D MADAR_036 recA; recA protein K03553 recA; recombination protein RecA D MADAR_098 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D MADAR_213 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MADAR_472 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:bmm02010] D MADAR_059 putative YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D MADAR_126 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D MADAR_020 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MADAR_516 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MADAR_414 mdlA; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D MADAR_019 msbA; ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:bmm03070] D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:bmm02020] D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D MADAR_465 potassium transporter peripheral membrane component K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D MADAR_146 ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9] D MADAR_145 ccoQ; ccoQ cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D MADAR_144 ccoP; ccoP cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:bmm02024] D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly [PATH:bmm02040] D MADAR_506 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:bmm01501] D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:bmm01502] D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:bmm01000] C 01001 Protein kinases [BR:bmm01001] D MADAR_487 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:bmm01009] D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 01002 Peptidases and inhibitors [BR:bmm01002] D MADAR_447 lspA; putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D MADAR_202 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MADAR_571 hypothetical protein K07052 K07052; CAAX protease family protein D MADAR_051 M16 family peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D MADAR_052 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D MADAR_383 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MADAR_392 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MADAR_483 rseP; membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D MADAR_030 clpP; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MADAR_065 lon; ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D MADAR_271 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MADAR_215 prc; putative periplasmic tail-specific proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:bmm01003] D MADAR_328 glgA; glycogen synthase-related protein K00703 glgA; starch synthase [EC:2.4.1.21] D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] C 01005 Lipopolysaccharide biosynthesis proteins [BR:bmm01005] D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D MADAR_412 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmm01011] D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MADAR_116 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MADAR_141 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MADAR_035 mltD; putative membrane-bound lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:bmm01004] D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MADAR_501 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59] D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D MADAR_465 potassium transporter peripheral membrane component K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:bmm01006] D MADAR_314 ispB; polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D MADAR_429 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MADAR_347 menA; 1,4-Dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] C 01007 Amino acid related enzymes [BR:bmm01007] D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D MADAR_075 tyrB; aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:bmm00194] D MADAR_538 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MADAR_539 atpD; ATP synthase F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MADAR_278 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MADAR_279 atpA; ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MADAR_280 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D MADAR_281 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MADAR_282 atpE; ATP synthase F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:bmm03000] D MADAR_393 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 03021 Transcription machinery [BR:bmm03021] D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MADAR_506 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D MADAR_001 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MADAR_415 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D MADAR_439 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D MADAR_478 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:bmm03019] D MADAR_263 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MADAR_462 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-] D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MADAR_193 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:bmm03011] D MADAR_304 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MADAR_386 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MADAR_372 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MADAR_354 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MADAR_361 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MADAR_070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MADAR_381 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MADAR_364 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MADAR_387 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MADAR_379 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MADAR_355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MADAR_382 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MADAR_356 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MADAR_365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MADAR_504 rpsO; putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MADAR_093 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MADAR_369 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MADAR_071 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MADAR_374 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MADAR_140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MADAR_470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D MADAR_418 coaE; putative dephospho-CoA kinase K19033 PSRP4; 30S ribosomal protein S31 D MADAR_437 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MADAR_375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MADAR_378 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MADAR_377 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MADAR_366 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MADAR_363 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MADAR_072 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MADAR_436 rplJ; putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MADAR_438 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MADAR_435 rplL; 50S ribosomal protein L7+L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MADAR_388 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MADAR_368 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MADAR_360 rplO; putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MADAR_371 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MADAR_352 rplQ; putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D MADAR_362 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MADAR_454 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MADAR_188 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MADAR_577 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MADAR_373 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MADAR_376 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MADAR_367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MADAR_576 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MADAR_247 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MADAR_370 rhlE; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MADAR_500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MADAR_236 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MADAR_248 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D MADAR_569 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MADAR_187 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MADAR_357 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D MADAR_220 rplY; putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25 D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:bmm03009] D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MADAR_397 obgE; DNA-binding GTPase involved in cell partioning K03979 obgE; GTPase [EC:3.6.5.-] D MADAR_001 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D MADAR_415 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D MADAR_439 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG D MADAR_167 rsmA; 16S rRNA dimethyladenosine transferase, SAM-dependent K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MADAR_087 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MADAR_124 rsmH; 16S rRNA m(4)C1402 methyltransferase, SAM-dependent K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MADAR_317 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MADAR_528 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MADAR_488 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MADAR_263 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D MADAR_190 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MADAR_097 engA; GTP-binding protein EngA K03977 engA; GTPase D MADAR_192 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MADAR_254 hypothetical protein K07042 ybeY; probable rRNA maturation factor D MADAR_130 putative ATP/GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:bmm03016] D MADAR_572 rbn; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MADAR_479 hinT; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MADAR_018 truA; putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MADAR_192 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MADAR_429 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MADAR_068 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D MADAR_255 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MADAR_245 rnpB; RNase P RNA K01978 rnpB; M1 RNA D MADAR_219 tadA; A34-tRNA adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D MADAR_407 miaB; RNA modification protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D MADAR_083 miaB; putative 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D MADAR_096 trmD; tRNA (guanine-N-(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MADAR_228 spoU; (guanosine-2'-O-)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D MADAR_274 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MADAR_582 sufA; Scaffold protein for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein D MADAR_313 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D MADAR_424 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D MADAR_165 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D MADAR_125 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D MADAR_153 tilS; putative tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D MADAR_287 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D MADAR_025 putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:bmm03012] D MADAR_002 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MADAR_186 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MADAR_385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D MADAR_380 fusA; translation elongation factor G K02355 fusA; elongation factor G D MADAR_239 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D MADAR_493 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D MADAR_067 prmB; putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D MADAR_565 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D MADAR_358 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D MADAR_544 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:bmm03110] D MADAR_543 clpB; putative heat shock ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D MADAR_047 clpB; ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MADAR_275 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D MADAR_276 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE D MADAR_410 groES; chaperone GroES K04078 groES; chaperonin GroES D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107] D MADAR_392 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MADAR_519 ppiD; peptidylprolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D MADAR_056 trxA; thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:bmm04131] D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:bmm03051] D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:bmm03032] D MADAR_229 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MADAR_456 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MADAR_081 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MADAR_216 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MADAR_095 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MADAR_315 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:bmm03036] D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MADAR_114 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D MADAR_256 uridine kinase K13052 divIC; cell division protein DivIC D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MADAR_060 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D MADAR_115 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D MADAR_118 ftsW; rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MADAR_012 mreC; putative rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D MADAR_009 mrdB; cell cycle protein K05837 rodA; rod shape determining protein RodA D MADAR_255 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D MADAR_087 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MADAR_109 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MADAR_530 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:bmm03400] D MADAR_265 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MADAR_p001 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MADAR_156 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MADAR_449 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D MADAR_269 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MADAR_036 recA; recA protein K03553 recA; recombination protein RecA D MADAR_098 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D MADAR_213 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MADAR_472 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MADAR_216 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MADAR_095 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MADAR_315 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MADAR_194 phosphoesterase domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:bmm03029] D MADAR_002 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D MADAR_186 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MADAR_385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D MADAR_380 fusA; translation elongation factor G K02355 fusA; elongation factor G D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MADAR_524 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK D MADAR_276 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MADAR_410 groES; chaperone GroES K04078 groES; chaperonin GroES D MADAR_275 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MADAR_109 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:bmm02000] D MADAR_516 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D MADAR_414 mdlA; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D MADAR_019 msbA; ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D MADAR_059 putative YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein D MADAR_126 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D MADAR_020 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D MADAR_580 sufC; SufBCD Fe-S assembly scaffold, FADH2-dependent K09013 sufC; Fe-S cluster assembly ATP-binding protein D MADAR_426 matE; Multi Antimicrobial Extrusion (MATE) family efflux pump K26939 norM; MATE family, multidrug efflux pump D MADAR_184 glpF; putative glycerol diffusion channel K02440 glpF; glycerol uptake facilitator D MADAR_589 mscS; MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel D MADAR_489 mgtE; putative Mg2+ transporter K06213 mgtE; magnesium transporter D MADAR_520 putative transmembrane CBS domain transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D MADAR_266 putative transmembrane CorC/HlyC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D MADAR_132 ompA; outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D MADAR_524 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family D MADAR_402 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD D MADAR_289 ktrB; K+ uptake transporter subunit KtrB K03498 trkH; trk/ktr system potassium uptake protein D MADAR_290 ktrA; K+ uptake transporter subunit KtrA K03499 trkA; trk/ktr system potassium uptake protein D MADAR_073 mntH; Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein D MADAR_232 marC; MarC family integral membrane protein K05595 marC; multiple antibiotic resistance protein D MADAR_118 ftsW; rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW D MADAR_111 pnuC; Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D MADAR_484 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D MADAR_485 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:bmm02044] D MADAR_227 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:bmm02042] D MADAR_520 putative transmembrane CBS domain transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D MADAR_266 putative transmembrane CorC/HlyC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system C 02035 Bacterial motility proteins [BR:bmm02035] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:bmm04812] D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MADAR_114 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA C 04147 Exosome [BR:bmm04147] D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MADAR_323 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MADAR_082 ahpC; alkyl hydroperoxide reductase, subunit C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK D MADAR_452 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu D MADAR_479 hinT; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D MADAR_183 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:bmm02048] D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:bmm04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:bmm03100] D MADAR_310 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MADAR_575 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_507 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_564 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_029 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MADAR_321 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MADAR_057 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MADAR_326 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MADAR_092 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MADAR_139 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MADAR_450 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MADAR_444 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MADAR_089 trnH; tRNA-His K14226 tRNA-His; tRNA His D MADAR_311 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MADAR_226 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_262 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_273 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_451 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MADAR_155 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MADAR_242 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_556 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_574 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met D MADAR_522 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MADAR_028 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MADAR_320 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MADAR_064 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_244 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_027 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MADAR_443 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MADAR_446 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MADAR_441 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MADAR_445 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MADAR_430 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D MADAR_471 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MADAR_396 ffs; signal recognition particle RNA K01983 ffs; SRP RNA D MADAR_245 rnpB; RNase P RNA K01978 rnpB; M1 RNA D MADAR_008 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D MADAR_403 ftnA; Ferritin, major cytoplasmic iron storage protein K02217 ftnA; ferritin [EC:1.16.3.2] D MADAR_053 argF; ornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] D MADAR_007 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D MADAR_463 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D MADAR_584 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D MADAR_511 putative transmembrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D MADAR_026 putative membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-] D MADAR_258 tatD; Sec-independent protein translocase protein TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D MADAR_477 lpxP; thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D MADAR_006 yjeF; Putative kinase, ribokinase-like superfamily K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] C 99981 Carbohydrate metabolism C 99982 Energy metabolism C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D MADAR_151 yggS; Pyridoxal 5'-phosphate binding protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D MADAR_044 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D MADAR_133 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D MADAR_243 hypothetical protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins C 99992 Structural proteins D MADAR_523 hypothetical protein K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D MADAR_101 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D MADAR_581 sufB; SufBCD Fe-S assembly scaffold, FADH2-dependent K09014 sufB; Fe-S cluster assembly protein SufB D MADAR_579 sufD; SufBCD Fe-S assembly scaffold, FADH2-dependent K09015 sufD; Fe-S cluster assembly protein SufD D MADAR_497 sufE; putative SufE Fe/S-cluster-related protein K02426 sufE; cysteine desulfuration protein SufE D MADAR_176 hypothetical protein K03744 lemA; LemA protein D MADAR_550 hypothetical protein K03748 sanA; SanA protein D MADAR_218 dedA; putative membrane-associated protein K03975 dedA; membrane-associated protein C 99997 Function unknown D MADAR_175 hypothetical protein K06872 K06872; uncharacterized protein D MADAR_419 hypothetical protein K06973 K06973; uncharacterized protein D MADAR_334 hypothetical protein K07090 K07090; uncharacterized protein D MADAR_196 hypothetical protein K07164 K07164; uncharacterized protein D MADAR_585 hypothetical protein K08998 K08998; uncharacterized protein D MADAR_172 hypothetical protein K08999 K08999; uncharacterized protein D MADAR_583 secreted protein containing DUF192 K09005 K09005; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024