+D GENES KO
#
KEGG Orthology (KO) - Blattabacterium sp. (Mastotermes darwiniensis)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bmm00010]
D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MADAR_323 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:bmm00020]
D MADAR_261 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D MADAR_586 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D MADAR_343 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D MADAR_041 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D MADAR_257 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bmm00030]
D MADAR_080 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D MADAR_134 tktB; Transketolase B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D MADAR_135 dxs; DXP synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D MADAR_400 fsaB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D MADAR_322 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D MADAR_221 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions
D MADAR_080 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:bmm00051]
D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D MADAR_322 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism
D MADAR_328 glgA; glycogen synthase-related protein K00703 glgA; starch synthase [EC:2.4.1.21]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bmm00520]
D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00620 Pyruvate metabolism [PATH:bmm00620]
D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D MADAR_142 maeB; Malic enzyme, NADP-dependent K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D MADAR_257 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D MADAR_535 pck; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bmm00630]
D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D MADAR_261 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D MADAR_586 acnA; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:bmm00640]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:bmm00650]
D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00660 C5-Branched dibasic acid metabolism
D MADAR_045 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D MADAR_566 sucD; succinyl-CoA ligase (ADP-forming) subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism
D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bmm00190]
D MADAR_420 ndh; putative type II NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D MADAR_459 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D MADAR_458 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D MADAR_460 sdhC; succinate dehydrogenase subunit C/fumarate reductase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D MADAR_146 ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D MADAR_145 ccoQ; ccoQ cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D MADAR_144 ccoP; ccoP cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D MADAR_279 atpA; ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MADAR_539 atpD; ATP synthase F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MADAR_278 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D MADAR_280 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D MADAR_538 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D MADAR_281 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D MADAR_282 atpE; ATP synthase F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D MADAR_004 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bmm00680]
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D MADAR_200 fbaA; fructose 1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism
D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
C 00920 Sulfur metabolism [PATH:bmm00920]
D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D MADAR_194 phosphoesterase domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D MADAR_342 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D MADAR_336 cysJ; sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D MADAR_335 cysI; sulfite reductase (NADPH) hemoprotein subunit beta K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D MADAR_338 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bmm00061]
D MADAR_457 accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D MADAR_237 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D MADAR_238 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D MADAR_201 accD; acetyl-CoA carboxylase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D MADAR_534 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D MADAR_501 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bmm00561]
D MADAR_183 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:bmm00564]
D MADAR_182 glpA; glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D MADAR_391 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D MADAR_253 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D MADAR_390 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bmm00230]
D MADAR_221 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D MADAR_203 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D MADAR_205 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D MADAR_210 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D MADAR_206 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D MADAR_209 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D MADAR_208 purC; Phosphoribosylamidoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D MADAR_211 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D MADAR_108 pnp; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D MADAR_452 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D MADAR_202 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D MADAR_319 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MADAR_212 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:bmm00240]
D MADAR_298 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D MADAR_299 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D MADAR_234 pyrD; dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D MADAR_233 pyrF; bifunctional orotate phosphoribosyltransferase/orotidine 5'-phosphate decarboxylase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D MADAR_492 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D MADAR_395 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D MADAR_547 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D MADAR_086 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MADAR_227 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D MADAR_p001 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D MADAR_222 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bmm00250]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D MADAR_212 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D MADAR_211 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D MADAR_298 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D MADAR_299 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bmm00260]
D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D MADAR_384 pgm; phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D MADAR_253 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:bmm00270]
D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D MADAR_338 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D MADAR_498 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D MADAR_078 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_023 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bmm00280]
D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bmm00290]
D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:bmm00300]
D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D MADAR_404 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D MADAR_272 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D MADAR_191 dapD; 2, 3, 4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_128 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D MADAR_075 tyrB; aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bmm00310]
D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:bmm00220]
D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_054 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D MADAR_301 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_055 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bmm00330]
D MADAR_086 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D MADAR_545 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D MADAR_546 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bmm00340]
D MADAR_157 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D MADAR_164 hisI; bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D MADAR_162 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D MADAR_161 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D MADAR_163 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D MADAR_160 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D MADAR_158 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:bmm00350]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:bmm00360]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bmm00400]
D MADAR_217 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D MADAR_529 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D MADAR_154 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D MADAR_137 aroA; 5-enolpyruvyl shikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D MADAR_428 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D MADAR_077 phospho-2-dehydro-3-deoxyheptonate aldolase (aroG)/chorismate mutase (pheA) K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D MADAR_076 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D MADAR_074 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D MADAR_037 phnP; metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bmm00450]
D MADAR_498 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D MADAR_578 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D MADAR_560 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
C 00470 D-Amino acid metabolism [PATH:bmm00470]
D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D MADAR_141 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D MADAR_128 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism
D MADAR_343 icd; isocitrate dehydrogenase (NADP+) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bmm00540]
D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D MADAR_412 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bmm00541]
D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D MADAR_455 phosphoglucomutase/phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
C 00550 Peptidoglycan biosynthesis [PATH:bmm00550]
D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D MADAR_116 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:bmm00552]
D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bmm00543]
D MADAR_339 cysE; putative serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bmm00730]
D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D MADAR_021 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bmm00740]
D MADAR_058 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D MADAR_268 ribE; riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D MADAR_536 ribC; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D MADAR_540 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:bmm00750]
D MADAR_555 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D MADAR_588 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bmm00760]
D MADAR_406 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D MADAR_108 pnp; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D MADAR_214 surE; acid phosphatase, survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D MADAR_286 nadE; NH(3)-dependent NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D MADAR_526 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D MADAR_496 sad; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bmm00770]
D MADAR_480 yigI; pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D MADAR_330 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D MADAR_417 coaE; putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D MADAR_110 acpT; putative phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:bmm00780]
D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D MADAR_393 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bmm00785]
D MADAR_084 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D MADAR_198 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_513 acoA; pyruvate dehydrogenase E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MADAR_170 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MADAR_514 aceF; dihydrolipoamide acyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D MADAR_041 sucA; 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D MADAR_005 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_042 sucB; 2-oxoglutarate dehydrogenase, E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D MADAR_024 gcvP; glycine cleavage system protein P K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D MADAR_149 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bmm00790]
D MADAR_285 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D MADAR_325 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D MADAR_510 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D MADAR_173 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D MADAR_431 folC; putative folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D MADAR_058 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D MADAR_424 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D MADAR_165 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:bmm00670]
D MADAR_173 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D MADAR_166 folD; putative methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D MADAR_205 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D MADAR_553 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D MADAR_425 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D MADAR_222 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D MADAR_169 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bmm00860]
D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MADAR_288 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D MADAR_291 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D MADAR_337 cysG; siroheme synthase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bmm00130]
D MADAR_421 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D MADAR_549 menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D MADAR_344 menE; putative O-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D MADAR_348 menB; 1,4-Dihydroxy-2-naphthoyl-CoA (DHNA-CoA) synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D MADAR_422 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D MADAR_347 menA; 1,4-Dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bmm00900]
D MADAR_423 idi; putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D MADAR_314 ispB; polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D MADAR_134 tktB; Transketolase B K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D MADAR_135 dxs; DXP synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D MADAR_421 entC; isochorismate synthase entC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:bmm00261]
D MADAR_340 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D MADAR_341 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D MADAR_223 thrA; aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D MADAR_318 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D MADAR_404 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D MADAR_272 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
D MADAR_031 rffH; glucose-1-phosphate uridylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:bmm00401]
D MADAR_076 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D MADAR_534 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D MADAR_078 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D MADAR_225 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D MADAR_224 ureA; bifunctional urease gamma/beta subunit K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bmm03020]
D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bmm03010]
D MADAR_304 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D MADAR_386 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D MADAR_372 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D MADAR_354 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D MADAR_361 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D MADAR_070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D MADAR_381 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D MADAR_364 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D MADAR_387 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D MADAR_379 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D MADAR_355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D MADAR_382 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D MADAR_356 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D MADAR_365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D MADAR_504 rpsO; putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D MADAR_093 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D MADAR_369 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D MADAR_071 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D MADAR_374 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D MADAR_140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D MADAR_470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D MADAR_437 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D MADAR_375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D MADAR_378 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D MADAR_377 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D MADAR_366 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D MADAR_363 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D MADAR_435 rplL; 50S ribosomal protein L7+L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D MADAR_072 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D MADAR_436 rplJ; putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D MADAR_438 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D MADAR_388 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D MADAR_368 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D MADAR_360 rplO; putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D MADAR_371 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D MADAR_352 rplQ; putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D MADAR_362 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D MADAR_454 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D MADAR_188 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D MADAR_577 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D MADAR_373 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D MADAR_376 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D MADAR_367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D MADAR_220 rplY; putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25
D MADAR_576 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D MADAR_247 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D MADAR_370 rhlE; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D MADAR_500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D MADAR_236 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D MADAR_248 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D MADAR_569 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D MADAR_187 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D MADAR_357 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bmm00970]
D MADAR_310 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D MADAR_575 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_507 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_564 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_029 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_321 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D MADAR_057 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D MADAR_326 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D MADAR_092 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D MADAR_139 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D MADAR_450 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MADAR_444 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MADAR_089 trnH; tRNA-His K14226 tRNA-His; tRNA His
D MADAR_311 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D MADAR_226 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_262 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_273 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_451 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_155 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MADAR_242 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_556 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_574 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_522 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D MADAR_028 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MADAR_320 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MADAR_064 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_244 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_027 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_443 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MADAR_446 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MADAR_441 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D MADAR_445 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D MADAR_430 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D MADAR_471 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MADAR_553 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bmm03060]
D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG
D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D MADAR_396 ffs; signal recognition particle RNA K01983 ffs; SRP RNA
D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC
D MADAR_271 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D MADAR_447 lspA; putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bmm04122]
D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D MADAR_274 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bmm03018]
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D MADAR_462 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D MADAR_193 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bmm03030]
D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MADAR_456 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D MADAR_081 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D MADAR_229 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bmm03410]
D MADAR_265 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D MADAR_156 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bmm03420]
D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bmm03430]
D MADAR_449 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D MADAR_269 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bmm03440]
D MADAR_036 recA; recA protein K03553 recA; recombination protein RecA
D MADAR_098 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D MADAR_213 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D MADAR_472 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bmm02010]
D MADAR_059 putative YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D MADAR_126 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D MADAR_020 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D MADAR_516 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D MADAR_414 mdlA; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D MADAR_019 msbA; ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:bmm03070]
D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG
D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bmm02020]
D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D MADAR_465 potassium transporter peripheral membrane component K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D MADAR_146 ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D MADAR_145 ccoQ; ccoQ cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D MADAR_144 ccoP; ccoP cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bmm02024]
D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG
D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:bmm02040]
D MADAR_506 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bmm01501]
D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bmm01502]
D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D MADAR_512 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bmm01000]
C 01001 Protein kinases [BR:bmm01001]
D MADAR_487 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:bmm01009]
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:bmm01002]
D MADAR_447 lspA; putative signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D MADAR_202 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D MADAR_207 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D MADAR_327 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D MADAR_571 hypothetical protein K07052 K07052; CAAX protease family protein
D MADAR_051 M16 family peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D MADAR_052 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D MADAR_383 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D MADAR_392 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D MADAR_483 rseP; membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D MADAR_030 clpP; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D MADAR_065 lon; ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D MADAR_271 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D MADAR_215 prc; putative periplasmic tail-specific proteinase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
C 01003 Glycosyltransferases [BR:bmm01003]
D MADAR_328 glgA; glycogen synthase-related protein K00703 glgA; starch synthase [EC:2.4.1.21]
D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bmm01005]
D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D MADAR_412 putative hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmm01011]
D MADAR_476 murA; UDP-N-acetylglucosamine-1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D MADAR_107 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D MADAR_116 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D MADAR_119 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D MADAR_121 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D MADAR_486 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D MADAR_141 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D MADAR_120 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D MADAR_117 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D MADAR_094 bacA; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D MADAR_332 mrcA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D MADAR_010 mrdA; putative penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D MADAR_035 mltD; putative membrane-bound lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:bmm01004]
D MADAR_259 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D MADAR_501 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D MADAR_533 fabF; putative 3-oxoacyl-(acyl-carrier-protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D MADAR_548 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D MADAR_567 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase(lpxC)/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase(fabZ) K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D MADAR_079 fabI; enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D MADAR_465 potassium transporter peripheral membrane component K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D MADAR_230 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:bmm01006]
D MADAR_314 ispB; polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D MADAR_525 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D MADAR_429 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D MADAR_347 menA; 1,4-Dihydroxy-2-naphthoic acid (DHNA)-octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:bmm01007]
D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MADAR_088 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D MADAR_075 tyrB; aspartate/tyrosine/aromatic aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D MADAR_159 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D MADAR_300 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_017 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D MADAR_179 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D MADAR_152 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bmm00194]
D MADAR_538 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D MADAR_539 atpD; ATP synthase F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MADAR_278 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D MADAR_279 atpA; ATP synthase F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MADAR_280 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D MADAR_281 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D MADAR_282 atpE; ATP synthase F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bmm03000]
D MADAR_393 birA; biotin-(acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 03021 Transcription machinery [BR:bmm03021]
D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MADAR_506 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D MADAR_495 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D MADAR_001 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D MADAR_415 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D MADAR_439 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D MADAR_478 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bmm03019]
D MADAR_263 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MADAR_462 phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D MADAR_241 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D MADAR_193 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:bmm03011]
D MADAR_304 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D MADAR_386 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D MADAR_372 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D MADAR_354 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D MADAR_361 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D MADAR_070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D MADAR_381 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D MADAR_364 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D MADAR_387 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D MADAR_379 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D MADAR_355 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D MADAR_382 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D MADAR_356 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D MADAR_365 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D MADAR_504 rpsO; putative 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D MADAR_093 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D MADAR_369 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D MADAR_071 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D MADAR_374 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D MADAR_140 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D MADAR_470 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D MADAR_418 coaE; putative dephospho-CoA kinase K19033 PSRP4; 30S ribosomal protein S31
D MADAR_437 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D MADAR_375 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D MADAR_378 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D MADAR_377 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D MADAR_366 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D MADAR_363 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D MADAR_072 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D MADAR_436 rplJ; putative 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D MADAR_438 rplK; Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D MADAR_435 rplL; 50S ribosomal protein L7+L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D MADAR_388 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D MADAR_368 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D MADAR_360 rplO; putative 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D MADAR_371 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D MADAR_352 rplQ; putative 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D MADAR_362 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D MADAR_454 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D MADAR_188 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D MADAR_577 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D MADAR_373 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D MADAR_376 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D MADAR_367 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D MADAR_576 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D MADAR_247 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D MADAR_370 rhlE; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D MADAR_500 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D MADAR_236 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D MADAR_248 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D MADAR_569 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D MADAR_187 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D MADAR_357 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D MADAR_220 rplY; putative ribosomal L25p family stress protein K02897 RP-L25; large subunit ribosomal protein L25
D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bmm03009]
D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MADAR_397 obgE; DNA-binding GTPase involved in cell partioning K03979 obgE; GTPase [EC:3.6.5.-]
D MADAR_001 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D MADAR_415 nusB; antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D MADAR_439 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D MADAR_167 rsmA; 16S rRNA dimethyladenosine transferase, SAM-dependent K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D MADAR_087 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MADAR_124 rsmH; 16S rRNA m(4)C1402 methyltransferase, SAM-dependent K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D MADAR_317 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D MADAR_528 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D MADAR_488 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D MADAR_263 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D MADAR_190 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D MADAR_427 recQ; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D MADAR_097 engA; GTP-binding protein EngA K03977 engA; GTPase
D MADAR_192 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D MADAR_254 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D MADAR_130 putative ATP/GTP-binding protein K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:bmm03016]
D MADAR_572 rbn; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MADAR_235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MADAR_448 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MADAR_063 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MADAR_432 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MADAR_085 lysS; lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MADAR_040 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MADAR_494 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MADAR_185 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MADAR_168 serS; serine-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MADAR_284 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MADAR_174 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MADAR_112 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MADAR_103 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MADAR_558 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MADAR_277 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D MADAR_479 hinT; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D MADAR_018 truA; putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D MADAR_192 rimN; Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D MADAR_429 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D MADAR_068 trmE; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D MADAR_255 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MADAR_245 rnpB; RNase P RNA K01978 rnpB; M1 RNA
D MADAR_219 tadA; A34-tRNA adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D MADAR_407 miaB; RNA modification protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D MADAR_083 miaB; putative 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D MADAR_096 trmD; tRNA (guanine-N-(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D MADAR_228 spoU; (guanosine-2'-O-)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D MADAR_274 trmU; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D MADAR_582 sufA; Scaffold protein for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D MADAR_313 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D MADAR_424 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D MADAR_165 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D MADAR_125 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D MADAR_153 tilS; putative tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D MADAR_287 peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D MADAR_025 putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D MADAR_329 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D MADAR_505 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bmm03012]
D MADAR_002 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D MADAR_186 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D MADAR_385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MADAR_380 fusA; translation elongation factor G K02355 fusA; elongation factor G
D MADAR_239 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D MADAR_493 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D MADAR_067 prmB; putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D MADAR_565 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D MADAR_358 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D MADAR_544 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:bmm03110]
D MADAR_543 clpB; putative heat shock ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D MADAR_047 clpB; ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D MADAR_275 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D MADAR_276 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D MADAR_410 groES; chaperone GroES K04078 groES; chaperonin GroES
D MADAR_127 degQ; serine protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D MADAR_392 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D MADAR_283 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D MADAR_519 ppiD; peptidylprolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D MADAR_056 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:bmm04131]
D MADAR_177 ndk; Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:bmm03051]
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bmm03032]
D MADAR_229 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D MADAR_456 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D MADAR_081 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D MADAR_216 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D MADAR_095 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D MADAR_315 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bmm03036]
D MADAR_532 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D MADAR_114 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D MADAR_256 uridine kinase K13052 divIC; cell division protein DivIC
D MADAR_122 ftsI; FtsI-like transpeptidase/penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D MADAR_060 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D MADAR_115 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D MADAR_118 ftsW; rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW
D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D MADAR_012 mreC; putative rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D MADAR_009 mrdB; cell cycle protein K05837 rodA; rod shape determining protein RodA
D MADAR_255 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MADAR_087 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MADAR_109 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D MADAR_530 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bmm03400]
D MADAR_265 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D MADAR_p001 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D MADAR_156 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D MADAR_066 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D MADAR_473 uvrD; putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MADAR_434 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MADAR_433 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MADAR_353 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D MADAR_449 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D MADAR_269 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D MADAR_303 polc; bifunctional DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion protein K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MADAR_557 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MADAR_252 exoX; putative DNA polymerase III epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D MADAR_046 dnaX; DNA polymerase III holoenzyme, tau and gamma K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MADAR_036 recA; recA protein K03553 recA; recombination protein RecA
D MADAR_098 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D MADAR_213 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D MADAR_472 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D MADAR_216 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D MADAR_095 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D MADAR_315 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D MADAR_264 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D MADAR_554 hupB; histone-like DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D MADAR_305 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MADAR_p004 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MADAR_194 phosphoesterase domain-containing protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:bmm03029]
D MADAR_002 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D MADAR_186 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D MADAR_385 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MADAR_380 fusA; translation elongation factor G K02355 fusA; elongation factor G
D MADAR_542 tyrS; putative tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MADAR_490 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MADAR_003 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MADAR_559 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MADAR_180 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MADAR_524 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D MADAR_276 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D MADAR_410 groES; chaperone GroES K04078 groES; chaperonin GroES
D MADAR_275 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D MADAR_109 mrp; Mrp/Nbp35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bmm02000]
D MADAR_516 msbA; lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D MADAR_414 mdlA; ABC transporter, ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D MADAR_019 msbA; ABC transporter, ATP-binding and permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D MADAR_059 putative YjgP/YjgQ family permease K07091 lptF; lipopolysaccharide export system permease protein
D MADAR_126 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D MADAR_020 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D MADAR_580 sufC; SufBCD Fe-S assembly scaffold, FADH2-dependent K09013 sufC; Fe-S cluster assembly ATP-binding protein
D MADAR_426 matE; Multi Antimicrobial Extrusion (MATE) family efflux pump K26939 norM; MATE family, multidrug efflux pump
D MADAR_184 glpF; putative glycerol diffusion channel K02440 glpF; glycerol uptake facilitator
D MADAR_589 mscS; MscS Mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D MADAR_489 mgtE; putative Mg2+ transporter K06213 mgtE; magnesium transporter
D MADAR_520 putative transmembrane CBS domain transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D MADAR_266 putative transmembrane CorC/HlyC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D MADAR_132 ompA; outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D MADAR_524 yaeT; outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D MADAR_402 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D MADAR_289 ktrB; K+ uptake transporter subunit KtrB K03498 trkH; trk/ktr system potassium uptake protein
D MADAR_290 ktrA; K+ uptake transporter subunit KtrA K03499 trkA; trk/ktr system potassium uptake protein
D MADAR_073 mntH; Mn2+/Fe2+ transporter, NRAMP family K03322 mntH; manganese transport protein
D MADAR_232 marC; MarC family integral membrane protein K05595 marC; multiple antibiotic resistance protein
D MADAR_118 ftsW; rod shape-determining protein rodA K03588 ftsW; cell division protein FtsW
D MADAR_111 pnuC; Nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D MADAR_484 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D MADAR_485 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:bmm02044]
D MADAR_227 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D MADAR_551 secA; preprotein translocase subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MADAR_409 secG; preprotein translocase subunit K03075 secG; preprotein translocase subunit SecG
D MADAR_359 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D MADAR_181 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D MADAR_250 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MADAR_416 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D MADAR_394 yidC; putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MADAR_034 putative Sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_518 tatA; putative Sec-independent-protein-translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D MADAR_131 tatC; Sec-independent protein translocase protein TatC, putative K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bmm02042]
D MADAR_520 putative transmembrane CBS domain transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D MADAR_266 putative transmembrane CorC/HlyC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system
C 02035 Bacterial motility proteins [BR:bmm02035]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bmm04812]
D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MADAR_114 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
C 04147 Exosome [BR:bmm04147]
D MADAR_251 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D MADAR_351 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MADAR_562 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MADAR_323 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D MADAR_082 ahpC; alkyl hydroperoxide reductase, subunit C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D MADAR_411 groL; 60 kDa chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D MADAR_389 dnaK; dnaK protein K04043 dnaK; molecular chaperone DnaK
D MADAR_452 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D MADAR_442 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MADAR_479 hinT; HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D MADAR_398 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D MADAR_302 argininosuccinate synthase(argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D MADAR_231 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D MADAR_183 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D MADAR_333 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D MADAR_204 purH; phosphoribosylaminoimidazole carboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D MADAR_464 lpdA; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_399 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MADAR_491 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D MADAR_508 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:bmm02048]
D MADAR_113 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MADAR_013 mreB; putative rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D MADAR_069 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D MADAR_461 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:bmm04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bmm03100]
D MADAR_310 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D MADAR_575 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_507 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_564 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_029 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MADAR_321 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D MADAR_057 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D MADAR_326 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D MADAR_092 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D MADAR_139 trnE; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D MADAR_450 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MADAR_444 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MADAR_089 trnH; tRNA-His K14226 tRNA-His; tRNA His
D MADAR_311 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D MADAR_226 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_262 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_273 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_451 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MADAR_155 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MADAR_242 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_556 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_574 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D MADAR_522 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D MADAR_028 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MADAR_320 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MADAR_064 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_244 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_027 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MADAR_443 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MADAR_446 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MADAR_441 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D MADAR_445 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D MADAR_430 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D MADAR_471 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D MADAR_312 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MADAR_307 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MADAR_306 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MADAR_396 ffs; signal recognition particle RNA K01983 ffs; SRP RNA
D MADAR_245 rnpB; RNase P RNA K01978 rnpB; M1 RNA
D MADAR_008 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D MADAR_403 ftnA; Ferritin, major cytoplasmic iron storage protein K02217 ftnA; ferritin [EC:1.16.3.2]
D MADAR_053 argF; ornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D MADAR_007 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D MADAR_463 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D MADAR_584 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D MADAR_511 putative transmembrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D MADAR_026 putative membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D MADAR_258 tatD; Sec-independent protein translocase protein TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D MADAR_477 lpxP; thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D MADAR_006 yjeF; Putative kinase, ribokinase-like superfamily K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D MADAR_151 yggS; Pyridoxal 5'-phosphate binding protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D MADAR_044 phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D MADAR_133 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D MADAR_243 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
D MADAR_523 hypothetical protein K06142 hlpA; outer membrane protein
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D MADAR_101 hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D MADAR_581 sufB; SufBCD Fe-S assembly scaffold, FADH2-dependent K09014 sufB; Fe-S cluster assembly protein SufB
D MADAR_579 sufD; SufBCD Fe-S assembly scaffold, FADH2-dependent K09015 sufD; Fe-S cluster assembly protein SufD
D MADAR_497 sufE; putative SufE Fe/S-cluster-related protein K02426 sufE; cysteine desulfuration protein SufE
D MADAR_176 hypothetical protein K03744 lemA; LemA protein
D MADAR_550 hypothetical protein K03748 sanA; SanA protein
D MADAR_218 dedA; putative membrane-associated protein K03975 dedA; membrane-associated protein
C 99997 Function unknown
D MADAR_175 hypothetical protein K06872 K06872; uncharacterized protein
D MADAR_419 hypothetical protein K06973 K06973; uncharacterized protein
D MADAR_334 hypothetical protein K07090 K07090; uncharacterized protein
D MADAR_196 hypothetical protein K07164 K07164; uncharacterized protein
D MADAR_585 hypothetical protein K08998 K08998; uncharacterized protein
D MADAR_172 hypothetical protein K08999 K08999; uncharacterized protein
D MADAR_583 secreted protein containing DUF192 K09005 K09005; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024