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Transcription Machinery - Bacillus pumilus SAFR-032
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E BPUM_0130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E BPUM_0093 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E BPUM_0094 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E BPUM_3361 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
E BPUM_1468 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E BPUM_2253 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor
E BPUM_0902 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_0160 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_2042 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_3514 RNA polymerase subunit sigma K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_3710 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_0588 RNA polymerase K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_0780 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E BPUM_0446 RNA polymerase sigma-B factor K03090 sigB; RNA polymerase sigma-B factor
E BPUM_2076 RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E BPUM_1426 sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E BPUM_1427 RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E BPUM_2309 RNA polymerase subunit sigma-70 K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E BPUM_0083 RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
E BPUM_1237 RNA polymerase subunit sigma K03093 sigI; RNA polymerase sigma-I factor
E BPUM_0807 RNA polymerase subunit sigma-70 K26992 sigO; RNA polymerase sigma-O factor
E BPUM_3063 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
E BPUM_1546 RNA polymerase subunit sigma K02405 fliA; RNA polymerase sigma factor FliA
E BPUM_2772 Fis family transcriptional regulator K24072 xpf; positive control factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E BPUM_1563 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E BPUM_2164 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E BPUM_0086 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E BPUM_0442 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
E BPUM_0441 RsbT antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS
E BPUM_1683 RsbT co-antagonist protein RsbRB K17763 rsbR; rsbT co-antagonist protein RsbR
E BPUM_2206 RsbT co-antagonist protein RsbRD K17763 rsbR; rsbT co-antagonist protein RsbR
E BPUM_0440 RsbT co-antagonist protein RsbRA K17763 rsbR; rsbT co-antagonist protein RsbR
E BPUM_0355 histidine kinase K17763 rsbR; rsbT co-antagonist protein RsbR
E BPUM_0443 phosphoserine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E BPUM_0447 phosphoserine phosphatase K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3]
E BPUM_0444 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
E BPUM_0445 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E BPUM_2367 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024