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Transcription Machinery - Bacillus thuringiensis YBT-1518
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
D TFIID
D TFIIE
D TFIIF
D TFIIH
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
E YBT1518_00675 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E YBT1518_00495 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
E YBT1518_00500 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
E YBT1518_30035 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
E YBT1518_21210 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Sigma factors
E YBT1518_23900 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
E YBT1518_06625 Sigma-M negative effector K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_10030 RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_06630 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_03400 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_06230 RNA polymerase factor sigma C K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_09400 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_09845 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_11670 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_13280 RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_13945 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_15380 RNA polymerase factor sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_19715 RNA polymerase sigma-70 factor, ECF subfamily protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_25815 ECF subfamily RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_30175 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
E YBT1518_03955 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
E YBT1518_06045 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
E YBT1518_33886 RNA polymerase sigma factor SigB K03090 sigB; RNA polymerase sigma-B factor
E YBT1518_21390 sporulation sigma factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E YBT1518_21395 sporulation sigma factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E YBT1518_22555 sporulation sigma factor SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E YBT1518_24140 sporulation sigma factor SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
E YBT1518_00450 RNA polymerase factor sigma-70 K27000 sigH; RNA polymerase sigma-H factor
E YBT1518_18610 RNA polymerase sigma factor SigI K03093 sigI; RNA polymerase sigma-I factor
E YBT1518_28610 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C Other transcription-related factors
D RNA polymerase-associated proteins
E YBT1518_20930 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
E YBT1518_23105 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
E YBT1518_00465 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
E YBT1518_03970 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E YBT1518_33901 response regulator receiver modulated serine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E YBT1518_06055 Serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
E YBT1518_03965 anti-sigma B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E YBT1518_06035 anti-sigma F factor antagonist (spoIIAA-2); anti sigma b factor antagonist RsbV K04749 rsbV; anti-sigma B factor antagonist
E YBT1518_33896 anti-sigma B factor antagonist K04749 rsbV; anti-sigma B factor antagonist
E YBT1518_03960 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E YBT1518_06040 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
E YBT1518_33891 serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Transcription elongation factors
E YBT1518_24350 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Transcription termination factor
E YBT1518_30000 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
D TFE
D TFS
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024