+D GENES KO #

  KEGG Orthology (KO) - Candidatus Paracaedimonas acanthamoebae

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:caq00010] D IM40_00930 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IM40_04950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IM40_00450 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D IM40_03130 hypothetical protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IM40_04280 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IM40_07085 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IM40_03405 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IM40_06655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IM40_05360 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D IM40_05350 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00020 Citrate cycle (TCA cycle) [PATH:caq00020] D IM40_05480 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D IM40_07660 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D IM40_01815 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D IM40_07220 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D IM40_07215 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_07230 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D IM40_07235 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IM40_09195 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IM40_09200 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IM40_09185 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IM40_03015 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D IM40_07240 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IM40_05360 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D IM40_05350 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:caq00030] D IM40_00930 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IM40_08640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D IM40_04285 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D IM40_05400 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D IM40_06585 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D IM40_07565 hypothetical protein K00852 rbsK; ribokinase [EC:2.7.1.15] D IM40_03275 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IM40_00450 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D IM40_04950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:caq00040] D IM40_04080 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IM40_04075 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IM40_08640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:caq00051] D IM40_04950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IM40_00450 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D IM40_03130 hypothetical protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D IM40_06585 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:caq00052] D IM40_04075 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IM40_04950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:caq00053] D IM40_04080 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IM40_01475 hypothetical protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:caq00500] D IM40_04075 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IM40_00930 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:caq00520] D IM40_04905 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IM40_01855 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D IM40_04910 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D IM40_02860 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IM40_00075 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] D IM40_04075 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IM40_04080 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IM40_01475 hypothetical protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D IM40_00930 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00620 Pyruvate metabolism [PATH:caq00620] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IM40_05360 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D IM40_05350 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IM40_04060 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D IM40_06940 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D IM40_06935 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D IM40_04300 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D IM40_05750 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D IM40_07240 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IM40_03015 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:caq00630] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IM40_07240 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IM40_05480 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D IM40_07660 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_05110 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D IM40_03325 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00640 Propanoate metabolism [PATH:caq00640] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_04060 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D IM40_06940 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D IM40_06935 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D IM40_04300 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D IM40_07235 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IM40_07230 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism [PATH:caq00650] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_00480 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D IM40_00050 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D IM40_05110 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D IM40_09195 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IM40_09200 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IM40_09185 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IM40_07690 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] C 00660 C5-Branched dibasic acid metabolism D IM40_07235 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D IM40_07230 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism [PATH:caq00562] D IM40_08895 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D IM40_03130 hypothetical protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:caq00190] D IM40_07260 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D IM40_07265 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D IM40_07270 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D IM40_07275 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D IM40_07285 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D IM40_07290 NADH dehydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D IM40_07295 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D IM40_07300 NADH dehydrogenase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D IM40_05315 hypothetical protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D IM40_05310 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D IM40_05305 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D IM40_05300 NADH-quinone oxidoreductase chain 13 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D IM40_05295 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D IM40_07280 hypothetical protein K03943 NDUFV2; NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2] D IM40_09195 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D IM40_09200 succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D IM40_09185 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D IM40_06790 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D IM40_06780 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D IM40_06785 cytochrome B K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D IM40_00590 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IM40_05585 cytochrome B562 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D IM40_00585 cytochrome C oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D IM40_00600 hypothetical protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D IM40_01120 hypothetical protein K08738 CYC; cytochrome c D IM40_05080 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D IM40_05090 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D IM40_05085 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D IM40_05075 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D IM40_05095 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D IM40_00690 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D IM40_00675 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IM40_00680 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IM40_00685 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:caq00680] D IM40_03325 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IM40_07240 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IM40_00450 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D IM40_04950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IM40_03405 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IM40_04165 hypothetical protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00910 Nitrogen metabolism [PATH:caq00910] D IM40_03270 hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D IM40_01380 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism D IM40_00485 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:caq00061] D IM40_04060 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D IM40_06940 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D IM40_06935 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D IM40_04300 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D IM40_01155 acyl carrier protein K02078 acpP; acyl carrier protein D IM40_01145 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IM40_00840 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D IM40_01160 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D IM40_01150 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IM40_07715 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D IM40_01805 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D IM40_04635 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D IM40_00470 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:caq00071] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IM40_00480 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D IM40_00470 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:caq00561] D IM40_06535 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D IM40_07140 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IM40_08990 hypothetical protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D IM40_02605 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:caq00564] D IM40_05565 hypothetical protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D IM40_06535 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D IM40_07140 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D IM40_08990 hypothetical protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D IM40_04580 hypothetical protein K01048 pldB; lysophospholipase [EC:3.1.1.5] D IM40_00045 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D IM40_00040 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D IM40_03605 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D IM40_01235 hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:caq00592] D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:caq00230] D IM40_03275 hypothetical protein K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D IM40_07615 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D IM40_05065 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D IM40_01245 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IM40_00560 hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D IM40_06665 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IM40_00325 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D IM40_04390 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10440 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D IM40_06360 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D IM40_04345 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D IM40_04575 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D IM40_05620 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D IM40_02125 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:caq00240] D IM40_01245 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IM40_03145 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D IM40_04455 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D IM40_07615 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D IM40_05620 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D IM40_03250 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D IM40_04390 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10440 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D IM40_05245 hypothetical protein K00943 tmk; dTMP kinase [EC:2.7.4.9] D IM40_01625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D IM40_04195 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D IM40_04130 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D IM40_05135 hypothetical protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:caq00250] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IM40_08885 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04335 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04770 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_00090 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_00140 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_07530 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D IM40_03270 hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D IM40_04905 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:caq00260] D IM40_07170 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D IM40_07520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IM40_03325 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IM40_03405 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D IM40_04165 hypothetical protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D IM40_08980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_00045 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:caq00270] D IM40_05065 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D IM40_07170 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D IM40_07520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IM40_09165 hypothetical protein K01920 gshB; glutathione synthase [EC:6.3.2.3] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IM40_07240 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D IM40_04165 hypothetical protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:caq00280] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis C 00300 Lysine biosynthesis [PATH:caq00300] D IM40_07170 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D IM40_07520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IM40_06140 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D IM40_06680 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D IM40_01015 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D IM40_01010 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D IM40_04110 hypothetical protein K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D IM40_02825 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IM40_02830 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:caq00310] D IM40_07215 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:caq00220] D IM40_03270 hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:caq00330] D IM40_03920 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism [PATH:caq00380] D IM40_07215 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:caq00400] D IM40_04045 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism [PATH:caq00430] D IM40_07530 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D IM40_03270 hypothetical protein K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism D IM40_05230 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:caq00450] D IM40_07765 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D IM40_07075 ferredoxin-NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] C 00460 Cyanoamino acid metabolism D IM40_03325 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:caq00470] D IM40_02865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D IM40_02840 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IM40_08885 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04335 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04110 hypothetical protein K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:caq00480] D IM40_09165 hypothetical protein K01920 gshB; glutathione synthase [EC:6.3.2.3] D IM40_01255 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IM40_05495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D IM40_04820 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D IM40_01815 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:caq00540] D IM40_07720 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D IM40_03685 hypothetical protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D IM40_07710 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D IM40_07725 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D IM40_07730 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D IM40_08670 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D IM40_00295 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D IM40_03150 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D IM40_04405 hypothetical protein K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D IM40_08675 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D IM40_08665 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D IM40_08985 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D IM40_08750 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D IM40_08755 D-beta-D-heptose 1-phosphate adenosyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D IM40_05050 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:caq00541] D IM40_04075 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D IM40_04080 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D IM40_01475 hypothetical protein K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D IM40_04910 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D IM40_00075 UDP-N-acetyl-D-glucosamine dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136] C 00550 Peptidoglycan biosynthesis [PATH:caq00550] D IM40_02860 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IM40_02855 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D IM40_02840 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IM40_02825 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IM40_02865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D IM40_02830 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D IM40_04525 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D IM40_05490 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D IM40_02835 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D IM40_02850 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D IM40_05250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:caq00552] D IM40_05490 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:caq00730] D IM40_05695 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_05700 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_02125 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D IM40_08170 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism C 00750 Vitamin B6 metabolism D IM40_04165 hypothetical protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00760 Nicotinate and nicotinamide metabolism [PATH:caq00760] D IM40_07615 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D IM40_00855 inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D IM40_04695 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D IM40_04700 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D IM40_04690 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:caq00770] D IM40_05285 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D IM40_02930 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D IM40_09050 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D IM40_06960 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D IM40_02445 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] C 00780 Biotin metabolism [PATH:caq00780] D IM40_01160 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D IM40_01150 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IM40_07715 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D IM40_01805 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D IM40_05290 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:caq00785] D IM40_01350 lipoate--protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D IM40_06305 radical SAM protein K03644 lipA; lipoyl synthase [EC:2.8.1.8] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_05360 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D IM40_05350 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D IM40_07220 sucA; 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D IM40_07215 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] C 00790 Folate biosynthesis D IM40_02450 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] C 00670 One carbon pool by folate [PATH:caq00670] D IM40_00110 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D IM40_03325 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D IM40_01720 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D IM40_04130 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D IM40_05615 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:caq00860] D IM40_08980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D IM40_04030 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_02900 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IM40_03290 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D IM40_09035 hypothetical protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D IM40_01095 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D IM40_09025 membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D IM40_09030 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D IM40_00590 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IM40_00515 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:caq00130] D IM40_03655 hypothetical protein K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D IM40_07165 hypothetical protein K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D IM40_07055 hypothetical protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D IM40_00710 ubiE; ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D IM40_00520 ubiquinone biosynthesis protein UbiB K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:caq00900] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_00380 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D IM40_04525 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:caq00907] D IM40_00495 short-chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D IM40_04285 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures [PATH:caq01054] D IM40_08885 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04335 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:caq00261] D IM40_07170 hypothetical protein K00928 lysC; aspartate kinase [EC:2.7.2.4] D IM40_07520 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D IM40_06140 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D IM40_06680 hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis D IM40_08895 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D IM40_01145 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IM40_01150 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IM40_01805 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D IM40_01155 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:caq00362] D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D IM40_00480 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D IM40_00475 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:caq03020] D IM40_06215 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D IM40_06210 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D IM40_02140 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IM40_06355 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:caq03010] D IM40_04545 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D IM40_02050 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IM40_06670 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D IM40_02105 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IM40_03185 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D IM40_02000 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IM40_02090 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IM40_00980 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D IM40_02015 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IM40_02135 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IM40_01995 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IM40_02130 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IM40_02085 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IM40_03440 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IM40_05380 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D IM40_02065 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IM40_03190 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D IM40_02040 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IM40_09210 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D IM40_04275 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D IM40_06230 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IM40_02035 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D IM40_02020 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IM40_02025 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D IM40_02080 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IM40_02095 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IM40_06220 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D IM40_06225 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D IM40_06235 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IM40_00975 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IM40_02070 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IM40_02115 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IM40_02055 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D IM40_02145 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D IM40_02100 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IM40_05365 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D IM40_04975 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D IM40_03350 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D IM40_02045 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IM40_02030 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IM40_02075 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IM40_05540 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D IM40_03355 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D IM40_04900 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D IM40_02060 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IM40_02110 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D IM40_00445 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D IM40_01260 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D IM40_00245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D IM40_04970 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D IM40_01630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IM40_01645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IM40_01650 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:caq00970] D IM40_01640 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IM40_03970 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IM40_05925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_00070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_02160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_04960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_07390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IM40_08905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IM40_07395 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IM40_06150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IM40_04445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IM40_05145 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IM40_06695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IM40_07205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_06260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_08645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_04225 tRNA-His K14226 tRNA-His; tRNA His D IM40_01635 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IM40_00285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_00555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_04875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_05730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_06385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_07795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IM40_08690 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IM40_04725 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_08700 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_04330 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_01730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IM40_00455 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IM40_01425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IM40_04230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_01570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04475 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04420 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_07310 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_07475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_06250 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IM40_06265 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D IM40_06805 tRNA-Val K14237 tRNA-Val; tRNA Val D IM40_03600 tRNA-Val K14237 tRNA-Val; tRNA Val D IM40_04030 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_00700 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IM40_00695 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IM40_00705 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D IM40_01370 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IM40_04610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D IM40_06175 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D IM40_06170 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D IM40_03110 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IM40_07620 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IM40_04035 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IM40_01720 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D IM40_07760 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IM40_08970 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IM40_00955 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IM40_07510 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IM40_07470 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_02585 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_03040 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IM40_04625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IM40_04990 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IM40_04995 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IM40_06885 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IM40_06965 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:caq03060] D IM40_02120 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IM40_06245 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IM40_07600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IM40_07595 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IM40_07605 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D IM40_01400 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D IM40_08925 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IM40_09060 hypothetical protein K03071 secB; preprotein translocase subunit SecB D IM40_05385 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IM40_04120 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D IM40_02515 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D IM40_01740 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:caq04122] D IM40_05695 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_05700 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_01025 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:caq03018] D IM40_03395 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IM40_03435 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D IM40_09020 transcription termination factor Rho K03628 rho; transcription termination factor Rho D IM40_05280 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D IM40_00200 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IM40_01500 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IM40_04935 RNA-binding protein Hfq K03666 hfq; host factor-I protein B B 09124 Replication and repair C 03030 DNA replication [PATH:caq03030] D IM40_09055 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IM40_03635 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IM40_05240 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IM40_01250 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D IM40_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IM40_03210 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_07060 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IM40_05640 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:caq03410] D IM40_06620 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D IM40_04290 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D IM40_06475 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D IM40_00715 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D IM40_03010 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D IM40_07655 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:caq03420] D IM40_01885 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D IM40_05410 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D IM40_03610 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D IM40_03525 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:caq03430] D IM40_07050 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D IM40_00925 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D IM40_03525 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IM40_06915 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_03635 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IM40_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IM40_05240 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IM40_09055 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IM40_01250 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:caq03440] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_00015 hypothetical protein K03629 recF; DNA replication and repair protein RecF D IM40_08725 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D IM40_04185 recombinase RecR K06187 recR; recombination protein RecR D IM40_01355 recombinase RecA K03553 recA; recombination protein RecA D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_06715 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D IM40_06720 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D IM40_00060 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D IM40_08215 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IM40_10845 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IM40_03635 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IM40_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IM40_05240 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IM40_09055 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IM40_01250 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:caq02010] D IM40_01695 hypothetical protein K11073 potF; putrescine transport system substrate-binding protein D IM40_04365 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D IM40_04370 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D IM40_04375 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D IM40_07430 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D IM40_06610 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D IM40_01960 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D IM40_04645 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D IM40_01965 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D IM40_04650 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D IM40_04925 hypothetical protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D IM40_05200 arginine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D IM40_05195 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D IM40_05580 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D IM40_01125 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D IM40_01130 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D IM40_01135 ABC transporter permease K13895 yejE; microcin C transport system permease protein D IM40_01140 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D IM40_00860 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D IM40_04430 hypothetical protein K09816 znuB; zinc transport system permease protein D IM40_04435 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D IM40_03335 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D IM40_00165 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D IM40_00160 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D IM40_03035 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D IM40_03030 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D IM40_00655 heme transporter HemC K02195 ccmC; heme exporter protein C D IM40_00360 hypothetical protein K02194 ccmB; heme exporter protein B D IM40_00365 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D IM40_08620 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D IM40_08625 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D IM40_07125 hypothetical protein K09811 ftsX; cell division transport system permease protein D IM40_07120 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D IM40_08685 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D IM40_04385 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:caq03070] D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein D IM40_02925 hypothetical protein K02453 gspD; general secretion pathway protein D D IM40_00260 hypothetical protein K02455 gspF; general secretion pathway protein F D IM40_07600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IM40_07595 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IM40_06245 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IM40_02120 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IM40_07605 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D IM40_01400 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D IM40_08925 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IM40_04120 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D IM40_09060 hypothetical protein K03071 secB; preprotein translocase subunit SecB D IM40_05385 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IM40_09255 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D IM40_11215 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D IM40_10085 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D IM40_09235 hypothetical protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D IM40_11235 hypothetical protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D IM40_09275 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_10095 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_11195 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_09285 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IM40_11490 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IM40_08875 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D IM40_07540 hypothetical protein K11891 impL; type VI secretion system protein ImpL B B 09132 Signal transduction C 02020 Two-component system [PATH:caq02020] D IM40_06315 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D IM40_05665 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D IM40_00005 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D IM40_03925 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D IM40_00500 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D IM40_03480 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D IM40_03495 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D IM40_03505 hypothetical protein K12510 tadB; tight adherence protein B D IM40_05950 ATPase AAA K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_11140 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D IM40_03645 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT D IM40_06635 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA D IM40_06790 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D IM40_06780 cytochrome C K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D IM40_06785 cytochrome B K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D IM40_01120 hypothetical protein K08738 CYC; cytochrome c D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D IM40_06790 ubiquinol-cytochrome C reductase K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:caq02024] D IM40_04935 RNA-binding protein Hfq K03666 hfq; host factor-I protein D IM40_00470 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IM40_01400 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D IM40_10800 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D IM40_06245 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IM40_02120 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IM40_07605 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D IM40_08925 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IM40_04120 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D IM40_09060 hypothetical protein K03071 secB; preprotein translocase subunit SecB D IM40_05385 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:caq02030] D IM40_04305 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D IM40_01840 hypothetical protein K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:caq02040] D IM40_04305 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D IM40_01840 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D IM40_00765 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D IM40_00515 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:caq01501] D IM40_00900 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D IM40_00500 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D IM40_05510 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D IM40_07410 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein C 01502 Vancomycin resistance [PATH:caq01502] D IM40_03925 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D IM40_02865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D IM40_02830 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D IM40_02835 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D IM40_02850 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:caq01503] D IM40_08985 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D IM40_05665 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D IM40_05510 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D IM40_07410 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein D IM40_07720 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:caq01000] C 01001 Protein kinases [BR:caq01001] D IM40_10870 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IM40_05125 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D IM40_11140 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:caq01009] C 01002 Peptidases and inhibitors [BR:caq01002] D IM40_07425 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IM40_06665 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D IM40_08950 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D IM40_04905 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D IM40_04770 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_00090 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_00140 hypothetical protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D IM40_04325 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D IM40_06870 CAAX protease K07052 K07052; CAAX protease family protein D IM40_03925 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D IM40_00935 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D IM40_01255 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D IM40_01010 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D IM40_05275 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D IM40_05130 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D IM40_06400 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D IM40_07695 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D IM40_10800 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19] D IM40_05665 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D IM40_05250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IM40_06375 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D IM40_06365 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D IM40_09340 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10180 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10755 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10975 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_01390 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_02515 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D IM40_01740 hypothetical protein K03100 lepB; signal peptidase I [EC:3.4.21.89] D IM40_03920 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D IM40_03400 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D IM40_05220 hypothetical protein K08676 tri; tricorn protease [EC:3.4.21.-] D IM40_01810 hypothetical protein K04773 sppA; protease IV [EC:3.4.21.-] D IM40_07680 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D IM40_02975 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D IM40_09105 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D IM40_05660 hypothetical protein K04087 hflC; modulator of FtsH protease HflC C 01003 Glycosyltransferases [BR:caq01003] C 01005 Lipopolysaccharide biosynthesis proteins [BR:caq01005] D IM40_07720 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D IM40_07730 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D IM40_03685 hypothetical protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D IM40_07710 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D IM40_07725 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D IM40_08670 hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D IM40_08665 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D IM40_08675 hypothetical protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D IM40_08985 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D IM40_03150 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D IM40_04405 hypothetical protein K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D IM40_00295 D-arabinose 5-phosphate K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D IM40_08750 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D IM40_08755 D-beta-D-heptose 1-phosphate adenosyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D IM40_05050 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:caq01011] D IM40_02860 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D IM40_02855 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D IM40_02840 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D IM40_02825 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D IM40_02865 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D IM40_07680 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D IM40_02835 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D IM40_02850 hypothetical protein K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D IM40_05490 UDP pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D IM40_06970 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D IM40_06980 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D IM40_05250 hypothetical protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D IM40_04325 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D IM40_03925 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D IM40_06135 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D IM40_01165 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D IM40_09120 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:caq01004] D IM40_01145 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D IM40_00840 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D IM40_01160 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D IM40_01150 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D IM40_07715 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D IM40_01805 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D IM40_04635 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D IM40_03180 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D IM40_00470 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IM40_06535 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D IM40_07140 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:caq01008] D IM40_08885 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] D IM40_04335 hypothetical protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:caq01006] D IM40_00380 farnesyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D IM40_04525 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D IM40_03655 hypothetical protein K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D IM40_00590 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:caq01007] D IM40_04030 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_06885 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IM40_06965 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IM40_04035 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IM40_07470 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_02585 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_00955 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IM40_07760 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IM40_08970 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IM40_07510 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IM40_04610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D IM40_04625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IM40_06175 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D IM40_06170 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D IM40_07620 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IM40_03040 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IM40_03110 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IM40_01370 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IM40_04990 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IM40_04995 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IM40_08660 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D IM40_08980 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37] D IM40_04165 hypothetical protein K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:caq00194] D IM40_05095 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D IM40_05090 ATP synthase F0F1 subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D IM40_05085 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D IM40_05080 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D IM40_05075 hypothetical protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D IM40_00675 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IM40_00680 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D IM40_00685 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D IM40_00690 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:caq03000] D IM40_01560 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D IM40_00815 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D IM40_05690 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D IM40_05290 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D IM40_05940 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D IM40_05170 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator D IM40_02260 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D IM40_10505 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D IM40_09005 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IM40_07095 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D IM40_07195 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D IM40_08170 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D IM40_00435 hypothetical protein K07735 algH; putative transcriptional regulator D IM40_04125 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D IM40_03320 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D IM40_02805 hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:caq03021] D IM40_02140 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IM40_06215 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D IM40_06210 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D IM40_06355 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D IM40_00765 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D IM40_03630 RNA polymerase sigma 70 K03089 rpoH; RNA polymerase sigma-32 factor D IM40_05445 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D IM40_03410 hypothetical protein K03625 nusB; transcription antitermination protein NusB D IM40_06240 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D IM40_04125 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D IM40_00960 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D IM40_09020 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:caq03019] D IM40_01795 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D IM40_01745 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D IM40_05280 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IM40_03435 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D IM40_09020 transcription termination factor Rho K03628 rho; transcription termination factor Rho D IM40_00200 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IM40_01500 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IM40_04935 RNA-binding protein Hfq K03666 hfq; host factor-I protein D IM40_03395 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] C 03041 Spliceosome [BR:caq03041] D IM40_03700 hypothetical protein K13195 CIRBP; cold-inducible RNA-binding protein C 03011 Ribosome [BR:caq03011] D IM40_04545 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D IM40_02050 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D IM40_06670 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D IM40_02105 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D IM40_03185 hypothetical protein K02990 RP-S6; small subunit ribosomal protein S6 D IM40_02000 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D IM40_02090 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D IM40_00980 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D IM40_02015 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D IM40_02135 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D IM40_01995 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D IM40_02130 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D IM40_02085 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D IM40_03440 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D IM40_05380 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D IM40_02065 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D IM40_03190 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D IM40_02040 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D IM40_09210 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D IM40_04275 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D IM40_06230 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D IM40_02035 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D IM40_02020 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D IM40_02025 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D IM40_02080 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D IM40_02095 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D IM40_06225 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D IM40_06235 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D IM40_06220 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D IM40_00975 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D IM40_02070 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D IM40_02115 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D IM40_02055 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D IM40_02145 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D IM40_02100 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D IM40_05365 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D IM40_04975 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D IM40_03350 hypothetical protein K02888 RP-L21; large subunit ribosomal protein L21 D IM40_02045 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D IM40_02030 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D IM40_02075 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D IM40_03355 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D IM40_04900 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D IM40_02060 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D IM40_02110 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D IM40_00445 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D IM40_01260 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D IM40_00245 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D IM40_04970 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D IM40_05540 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D IM40_01650 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D IM40_01630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IM40_01645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:caq03009] D IM40_01745 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D IM40_01750 GTPase Era K03595 era; GTPase D IM40_04125 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D IM40_05445 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D IM40_03410 hypothetical protein K03625 nusB; transcription antitermination protein NusB D IM40_06240 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D IM40_08610 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D IM40_00920 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D IM40_04855 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D IM40_04210 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D IM40_09015 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D IM40_02810 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D IM40_06540 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D IM40_00915 hypothetical protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D IM40_06325 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D IM40_00775 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D IM40_08715 hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D IM40_03625 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D IM40_04810 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D IM40_01795 hypothetical protein K08301 rng; ribonuclease G [EC:3.1.26.-] D IM40_04410 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D IM40_04845 hypothetical protein K03977 engA; GTPase D IM40_04100 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D IM40_06360 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D IM40_05455 hypothetical protein K02834 rbfA; ribosome-binding factor A D IM40_03365 hypothetical protein K09710 ybeB; ribosome-associated protein D IM40_04790 hypothetical protein K07042 ybeY; probable rRNA maturation factor D IM40_05530 GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:caq03016] D IM40_04030 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_03040 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D IM40_00955 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D IM40_08970 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IM40_07470 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_02585 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_07510 hypothetical protein K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D IM40_04610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D IM40_01370 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D IM40_03110 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D IM40_07620 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D IM40_04035 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D IM40_07760 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D IM40_04625 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D IM40_04990 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D IM40_04995 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D IM40_06885 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IM40_06965 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D IM40_09110 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IM40_04775 hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D IM40_01715 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D IM40_03445 hypothetical protein K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D IM40_05695 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_05700 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_04100 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D IM40_09215 bacterial RNase P K01978 rnpB; M1 RNA D IM40_07190 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D IM40_04605 hypothetical protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D IM40_00290 3'-5' exonuclease K03684 rnd; ribonuclease D [EC:3.1.13.5] D IM40_01320 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D IM40_06175 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D IM40_06170 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D IM40_03025 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D IM40_05935 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D IM40_04800 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D IM40_04115 2-methylthioadenine synthase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D IM40_05370 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D IM40_01100 hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D IM40_01025 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D IM40_05710 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D IM40_04890 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D IM40_04815 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D IM40_05570 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D IM40_06955 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D IM40_03435 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:caq03012] D IM40_05450 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D IM40_03105 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D IM40_04540 elongation factor Ts K02357 tsf; elongation factor Ts D IM40_02010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_06255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_02005 fusA; elongation factor G K02355 fusA; elongation factor G D IM40_04620 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D IM40_04530 ribosome-recycling factor K02838 frr; ribosome recycling factor D IM40_04615 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D IM40_05535 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D IM40_01785 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D IM40_08900 elongation factor P K02356 efp; elongation factor P D IM40_04470 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:caq03110] D IM40_05500 ATPase AAA K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D IM40_06370 Clp protease ATP-binding protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D IM40_09100 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D IM40_00200 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IM40_05720 hypothetical protein K04044 hscA; molecular chaperone HscA D IM40_01500 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IM40_00205 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D IM40_07200 hypothetical protein K03687 GRPE; molecular chaperone GrpE D IM40_00630 heat-shock protein K04080 ibpA; molecular chaperone IbpA D IM40_01495 molecular chaperone GroES K04078 groES; chaperonin GroES D IM40_05665 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D IM40_06400 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D IM40_00690 ATP synthase F0F1 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D IM40_09060 hypothetical protein K03071 secB; preprotein translocase subunit SecB D IM40_00755 hypothetical protein K09796 pccA; periplasmic copper chaperone A D IM40_04705 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D IM40_08615 hypothetical protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D IM40_05115 thioredoxin K03671 TXN; thioredoxin D IM40_00345 hypothetical protein K05838 ybbN; putative thioredoxin D IM40_06280 glutaredoxin K03676 grxC; glutaredoxin 3 D IM40_06840 glutaredoxin K07390 grxD; monothiol glutaredoxin C 04131 Membrane trafficking [BR:caq04131] D IM40_01245 ndk; phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D IM40_04280 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IM40_06655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:caq03032] D IM40_07060 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D IM40_09835 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_09980 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IM40_10615 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_03775 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_11320 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_05210 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D IM40_06285 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_02955 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D IM40_04190 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D IM40_00005 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D IM40_03210 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_03635 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IM40_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IM40_01250 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D IM40_05240 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IM40_09055 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IM40_05640 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D IM40_02940 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D IM40_00020 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D IM40_08720 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D IM40_00505 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D IM40_06525 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:caq03036] D IM40_01745 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D IM40_09835 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_09980 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IM40_10615 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_03775 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_11320 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_05210 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D IM40_06285 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_02955 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D IM40_04190 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D IM40_00005 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D IM40_03415 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D IM40_05940 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D IM40_04935 RNA-binding protein Hfq K03666 hfq; host factor-I protein D IM40_02875 hypothetical protein K03590 ftsA; cell division protein FtsA D IM40_07120 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D IM40_01460 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D IM40_02870 hypothetical protein K03589 ftsQ; cell division protein FtsQ D IM40_02845 cell division protein FtsW K03588 ftsW; cell division protein FtsW D IM40_07125 hypothetical protein K09811 ftsX; cell division transport system permease protein D IM40_02880 hypothetical protein K03531 ftsZ; cell division protein FtsZ D IM40_05510 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D IM40_05335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D IM40_05330 hypothetical protein K03570 mreC; rod shape-determining protein MreC D IM40_05325 hypothetical protein K03571 mreD; rod shape-determining protein MreD D IM40_07790 cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA D IM40_09010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D IM40_09850 hypothetical protein K03496 parA; chromosome partitioning protein D IM40_09990 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D IM40_10585 chromosome partitioning protein K03496 parA; chromosome partitioning protein D IM40_04360 ATPase K03496 parA; chromosome partitioning protein D IM40_11310 hypothetical protein K03496 parA; chromosome partitioning protein D IM40_09005 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D IM40_08720 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D IM40_00505 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D IM40_09015 hypothetical protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D IM40_05405 hypothetical protein K03733 xerC; integrase/recombinase XerC D IM40_04055 hypothetical protein K04763 xerD; integrase/recombinase XerD D IM40_02165 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D IM40_08125 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D IM40_01405 GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:caq03400] D IM40_03390 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D IM40_01215 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D IM40_06475 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D IM40_04290 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D IM40_06620 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D IM40_00370 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IM40_08810 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IM40_03345 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D IM40_01625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D IM40_01560 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D IM40_03010 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D IM40_00715 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D IM40_07655 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D IM40_03670 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D IM40_00240 DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7] D IM40_05410 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D IM40_03610 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D IM40_03525 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D IM40_06215 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D IM40_06210 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D IM40_02140 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D IM40_06355 hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D IM40_01885 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D IM40_07050 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D IM40_00925 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D IM40_06915 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D IM40_03635 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D IM40_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D IM40_01250 hypothetical protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D IM40_05240 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D IM40_09055 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_08215 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IM40_10845 recombinase RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D IM40_01355 recombinase RecA K03553 recA; recombination protein RecA D IM40_06715 hypothetical protein K03550 ruvA; holliday junction DNA helicase RuvA D IM40_06720 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D IM40_04655 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D IM40_00015 hypothetical protein K03629 recF; DNA replication and repair protein RecF D IM40_00060 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D IM40_08725 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D IM40_04185 recombinase RecR K06187 recR; recombination protein RecR D IM40_03675 hypothetical protein K03631 recN; DNA repair protein RecN (Recombination protein N) D IM40_06945 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D IM40_06950 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D IM40_02940 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D IM40_00020 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D IM40_06525 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D IM40_09835 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_09980 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D IM40_10615 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_03775 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_11320 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_05210 transcriptional regulator HU subunit alpha K03530 hupB; DNA-binding protein HU-beta D IM40_06285 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D IM40_05940 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D IM40_02955 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D IM40_04190 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D IM40_09345 hypothetical protein K03502 umuC; DNA polymerase V D IM40_10175 hypothetical protein K03502 umuC; DNA polymerase V D IM40_10760 hypothetical protein K03502 umuC; DNA polymerase V D IM40_05790 hypothetical protein K03502 umuC; DNA polymerase V D IM40_09340 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10180 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10755 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_10975 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_01390 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D IM40_04390 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10435 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D IM40_10440 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:caq03029] D IM40_05450 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D IM40_03105 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D IM40_04540 elongation factor Ts K02357 tsf; elongation factor Ts D IM40_02010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_06255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_02005 fusA; elongation factor G K02355 fusA; elongation factor G D IM40_01750 GTPase Era K03595 era; GTPase D IM40_06885 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D IM40_08970 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D IM40_04610 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D IM40_07470 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_02585 hypothetical protein K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D IM40_00700 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D IM40_00695 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D IM40_00705 hypothetical protein K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D IM40_02945 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D IM40_07700 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D IM40_00200 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IM40_07200 hypothetical protein K03687 GRPE; molecular chaperone GrpE D IM40_01500 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IM40_01495 molecular chaperone GroES K04078 groES; chaperonin GroES D IM40_00205 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D IM40_05695 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_05700 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_06840 glutaredoxin K07390 grxD; monothiol glutaredoxin D IM40_05060 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7 D IM40_00590 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D IM40_00600 hypothetical protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D IM40_01400 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D IM40_05590 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D IM40_06560 hypothetical protein K07152 SCO1; protein SCO1 B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:caq02000] D IM40_08685 ABC transporter permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D IM40_04385 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D IM40_07450 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IM40_04755 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IM40_01290 hypothetical protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D IM40_01695 hypothetical protein K11073 potF; putrescine transport system substrate-binding protein D IM40_04365 spermidine/putrescine ABC transporter permease K11074 potI; putrescine transport system permease protein D IM40_04370 spermidine/putrescine ABC transporter permease K11075 potH; putrescine transport system permease protein D IM40_04375 ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D IM40_06610 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D IM40_01960 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D IM40_04645 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D IM40_01965 iron ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D IM40_04650 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D IM40_01975 hypothetical protein K18480 linN; cholesterol transport system auxiliary component D IM40_07430 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D IM40_04925 hypothetical protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein D IM40_05200 arginine ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D IM40_05195 peptide ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D IM40_03120 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D IM40_04600 hypothetical protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D IM40_04590 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D IM40_04585 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D IM40_04555 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D IM40_01270 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D IM40_05580 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D IM40_01125 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D IM40_01130 microcin ABC transporter permease K13894 yejB; microcin C transport system permease protein D IM40_01135 ABC transporter permease K13895 yejE; microcin C transport system permease protein D IM40_01140 microcin ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D IM40_00860 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D IM40_04430 hypothetical protein K09816 znuB; zinc transport system permease protein D IM40_04435 znuC; zinc ABC transporter ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D IM40_03335 hypothetical protein K03523 bioY; biotin transport system substrate-specific component D IM40_07100 hypothetical protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D IM40_07105 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D IM40_00165 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D IM40_00160 hypothetical protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D IM40_08620 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D IM40_08625 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D IM40_03035 multidrug ABC transporter substrate-binding protein K09808 lolC_E; lipoprotein-releasing system permease protein D IM40_03030 ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D IM40_00655 heme transporter HemC K02195 ccmC; heme exporter protein C D IM40_00360 hypothetical protein K02194 ccmB; heme exporter protein B D IM40_00365 hypothetical protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D IM40_07125 hypothetical protein K09811 ftsX; cell division transport system permease protein D IM40_07120 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D IM40_00900 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D IM40_08650 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D IM40_00330 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D IM40_00180 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D IM40_01530 hypothetical protein K08714 VGSC; voltage-gated sodium channel D IM40_05495 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D IM40_04820 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D IM40_04215 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D IM40_05755 hypothetical protein K06213 mgtE; magnesium transporter D IM40_03065 biopolymer transporter ExbB K03562 tolQ; biopolymer transport protein TolQ D IM40_07385 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D IM40_07585 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D IM40_10345 hypothetical protein K16079 omp31; outer membrane immunogenic protein D IM40_04025 hypothetical protein K16079 omp31; outer membrane immunogenic protein D IM40_00465 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D IM40_03870 hypothetical protein K19231 bmaC; fibronectin-binding autotransporter adhesin D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein D IM40_07700 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D IM40_04840 hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB D IM40_03680 transporter K05807 bamD; outer membrane protein assembly factor BamD D IM40_00305 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D IM40_00300 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D IM40_08630 hypothetical protein K04744 lptD; LPS-assembly protein D IM40_08975 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D IM40_04785 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D IM40_00230 hypothetical protein K13283 fieF; ferrous-iron efflux pump FieF D IM40_07410 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D IM40_05105 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter D IM40_05765 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter D IM40_00735 hypothetical protein K15268 eamA; O-acetylserine/cysteine efflux transporter D IM40_00320 hypothetical protein K03313 nhaA; Na+:H+ antiporter, NhaA family D IM40_05600 hypothetical protein K03455 KEA1_2_3; K+:H+ antiporter D IM40_04220 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein D IM40_05955 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D IM40_06970 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D IM40_06980 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase D IM40_01780 hypothetical protein K05835 rhtC; threonine efflux protein D IM40_02455 membrane protein K09125 yhhQ; queuosine precursor transporter D IM40_02845 cell division protein FtsW K03588 ftsW; cell division protein FtsW D IM40_05970 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D IM40_03100 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein D IM40_08785 hypothetical protein K03646 tolA; colicin import membrane protein D IM40_03095 tolB; translocation protein TolB K03641 tolB; TolB protein D IM40_00610 hppA; pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D IM40_00185 hypothetical protein K03543 emrA; membrane fusion protein, multidrug efflux system D IM40_05510 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D IM40_07785 magnesium transporter MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein C 02044 Secretion system [BR:caq02044] D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein D IM40_02925 hypothetical protein K02453 gspD; general secretion pathway protein D D IM40_00260 hypothetical protein K02455 gspF; general secretion pathway protein F D IM40_07425 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IM40_00255 hypothetical protein K02652 pilB; type IV pilus assembly protein PilB D IM40_03480 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D IM40_03490 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D IM40_03495 hypothetical protein K02282 cpaE; pilus assembly protein CpaE D IM40_03505 hypothetical protein K12510 tadB; tight adherence protein B D IM40_00105 membrane protein K02221 yggT; YggT family protein D IM40_05470 hypothetical protein K02238 comEC; competence protein ComEC D IM40_01840 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D IM40_09235 hypothetical protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D IM40_11235 hypothetical protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D IM40_09255 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D IM40_11215 hypothetical protein K03203 virB8; type IV secretion system protein VirB8 D IM40_10085 hypothetical protein K03195 virB10; type IV secretion system protein VirB10 D IM40_09275 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_10095 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_11195 hypothetical protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D IM40_09285 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IM40_11490 hypothetical protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D IM40_09260 hypothetical protein K12049 comB9; ComB9 competence protein D IM40_10080 hypothetical protein K12049 comB9; ComB9 competence protein D IM40_11210 hypothetical protein K12049 comB9; ComB9 competence protein D IM40_10055 hypothetical protein K12053 comB4; ComB4 competence protein D IM40_07940 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D IM40_02245 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D IM40_02255 hypothetical protein K12057 traF; conjugal transfer pilus assembly protein TraF D IM40_07925 hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D IM40_02270 hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D IM40_02275 hypothetical protein K12059 trbC; conjugal transfer pilus assembly protein TrbC D IM40_07915 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU D IM40_02280 conjugal transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU D IM40_07885 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D IM40_02310 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D IM40_02315 hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV D IM40_07865 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE D IM40_02330 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE D IM40_02335 hypothetical protein K12068 traL; conjugal transfer pilus assembly protein TraL D IM40_07935 hypothetical protein K12072 traH; conjugative transfer pilus assembly protein TraH D IM40_02250 hypothetical protein K12072 traH; conjugative transfer pilus assembly protein TraH D IM40_07540 hypothetical protein K11891 impL; type VI secretion system protein ImpL D IM40_07550 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ D IM40_01700 hypothetical protein K11895 impH; type VI secretion system protein ImpH D IM40_01705 hypothetical protein K11896 impG; type VI secretion system protein ImpG D IM40_06860 hypothetical protein K11897 impF; type VI secretion system protein ImpF D IM40_06850 hypothetical protein K11900 impC; type VI secretion system protein ImpC D IM40_07535 hypothetical protein K11902 impA; type VI secretion system protein ImpA D IM40_08875 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D IM40_07555 hypothetical protein K11918 lip3; type VI secretion system protein D IM40_08925 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D IM40_09060 hypothetical protein K03071 secB; preprotein translocase subunit SecB D IM40_07600 preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D IM40_06245 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D IM40_07595 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D IM40_02120 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D IM40_05385 RNA-binding protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D IM40_04120 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D IM40_07605 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D IM40_01400 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:caq02042] D IM40_07385 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D IM40_07585 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:caq02022] D IM40_06315 chemotaxis protein CheY K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D IM40_05950 ATPase AAA K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D IM40_05125 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D IM40_11140 hypothetical protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D IM40_06635 chemotaxis protein CheY K13584 ctrA; two-component system, cell cycle response regulator CtrA C 02035 Bacterial motility proteins [BR:caq02035] D IM40_04305 hypothetical protein K02416 fliM; flagellar motor switch protein FliM D IM40_01840 hypothetical protein K02417 fliN; flagellar motor switch protein FliN D IM40_01845 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D IM40_01850 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG D IM40_00255 hypothetical protein K02652 pilB; type IV pilus assembly protein PilB D IM40_07425 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D IM40_03480 hypothetical protein K02279 cpaB; pilus assembly protein CpaB D IM40_03490 hypothetical protein K02281 cpaD; pilus assembly protein CpaD D IM40_03495 hypothetical protein K02282 cpaE; pilus assembly protein CpaE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:caq04812] D IM40_05335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D IM40_02880 hypothetical protein K03531 ftsZ; cell division protein FtsZ D IM40_02875 hypothetical protein K03590 ftsA; cell division protein FtsA D IM40_09010 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D IM40_09850 hypothetical protein K03496 parA; chromosome partitioning protein D IM40_09990 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D IM40_10585 chromosome partitioning protein K03496 parA; chromosome partitioning protein D IM40_04360 ATPase K03496 parA; chromosome partitioning protein D IM40_11310 hypothetical protein K03496 parA; chromosome partitioning protein D IM40_09005 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:caq04147] D IM40_05155 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D IM40_04280 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D IM40_07085 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D IM40_06655 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D IM40_01500 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D IM40_00200 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D IM40_00930 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D IM40_02010 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_06255 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D IM40_09110 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D IM40_00470 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D IM40_05760 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D IM40_02125 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D IM40_02900 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D IM40_02450 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D IM40_07210 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06310 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D IM40_06895 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D IM40_03130 hypothetical protein K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:caq02048] D IM40_10660 elongation factor GreAB K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D IM40_02265 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D IM40_02370 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D IM40_10500 toxin RelE K06218 relE; mRNA interferase RelE/StbE D IM40_02260 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D IM40_10505 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D IM40_02365 hypothetical protein K18923 stbD; antitoxin StbD D IM40_10870 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D IM40_08480 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D IM40_03855 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D IM40_08260 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D IM40_08310 toxin Y4kP K19092 parE1_3_4; toxin ParE1/3/4 D IM40_08050 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D IM40_08220 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D IM40_08225 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D IM40_08475 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D IM40_09425 hypothetical protein K21498 higA-1; antitoxin HigA-1 D IM40_11010 hypothetical protein K21498 higA-1; antitoxin HigA-1 D IM40_10395 hypothetical protein K21498 higA-1; antitoxin HigA-1 D IM40_02880 hypothetical protein K03531 ftsZ; cell division protein FtsZ D IM40_05335 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D IM40_08720 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D IM40_00505 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D IM40_04030 glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05475 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D IM40_05695 hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D IM40_05700 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors [BR:caq04054] C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:caq01504] D IM40_08710 kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D IM40_03925 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D IM40_05510 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D IM40_07410 multidrug transporter AcrB K18138 acrB; multidrug efflux pump D IM40_00805 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:caq00536] D IM40_03990 hypothetical protein K15125 fhaB; filamentous hemagglutinin C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:caq03100] D IM40_01640 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IM40_03970 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D IM40_05925 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_00070 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_02160 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_04960 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D IM40_07390 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D IM40_08905 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D IM40_07395 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D IM40_06150 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IM40_04445 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D IM40_05145 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IM40_06695 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D IM40_07205 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_06260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_08645 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D IM40_04225 tRNA-His K14226 tRNA-His; tRNA His D IM40_01635 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D IM40_00285 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_00555 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_04875 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_05730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_06385 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D IM40_07795 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IM40_08690 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D IM40_04725 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_08700 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_04330 tRNA-Met K14230 tRNA-Met; tRNA Met D IM40_01730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D IM40_00455 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IM40_01425 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D IM40_04230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_01570 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04475 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D IM40_04420 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_07310 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_07475 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D IM40_06250 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D IM40_06265 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D IM40_06805 tRNA-Val K14237 tRNA-Val; tRNA Val D IM40_03600 tRNA-Val K14237 tRNA-Val; tRNA Val D IM40_01630 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D IM40_01645 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D IM40_01650 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D IM40_09215 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D IM40_06685 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D IM40_08760 oxidase K17893 AOX1; ubiquinol oxidase [EC:1.10.3.11] D IM40_05650 hypothetical protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D IM40_03425 hypothetical protein K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D IM40_01550 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D IM40_01180 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D IM40_00795 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D IM40_02680 hypothetical protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D IM40_05055 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D IM40_04250 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D IM40_09530 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D IM40_09755 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D IM40_11180 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D IM40_03060 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D IM40_05235 LuxR family transcriptional regulator K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D IM40_03640 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D IM40_01725 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] C 99981 Carbohydrate metabolism D IM40_05270 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D IM40_01210 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D IM40_08880 ferredoxin K05524 fdxA; ferredoxin D IM40_05705 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins D IM40_06890 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism D IM40_03280 hypothetical protein K02498 hemY; HemY protein D IM40_06300 hypothetical protein K18588 COQ10; coenzyme Q-binding protein COQ10 C 99988 Secondary metabolism C 99999 Others D IM40_07245 hypothetical protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D IM40_06380 hypothetical protein K03545 tig; trigger factor D IM40_06145 SsrA-binding protein K03664 smpB; SsrA-binding protein D IM40_09175 ATPase AAA K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D IM40_00570 hypothetical protein K03630 radC; DNA repair protein RadC D IM40_09155 hypothetical protein K07460 yraN; putative endonuclease D IM40_06530 DNA processing protein DprA K04096 smf; DNA processing protein D IM40_02155 ATPase AAA K07478 ycaJ; putative ATPase D IM40_02690 hypothetical protein K07481 K07481; transposase, IS5 family D IM40_10295 hypothetical protein K18320 IS15; transposase, IS6 family D IM40_10465 hypothetical protein K18320 IS15; transposase, IS6 family D IM40_10310 transposase K18320 IS15; transposase, IS6 family D IM40_10495 transposase K18320 IS15; transposase, IS6 family D IM40_10720 transposase K18320 IS15; transposase, IS6 family D IM40_10850 transposase K18320 IS15; transposase, IS6 family D IM40_10995 transposase K18320 IS15; transposase, IS6 family D IM40_11070 transposase K18320 IS15; transposase, IS6 family D IM40_11430 transposase K18320 IS15; transposase, IS6 family D IM40_01055 transposase K18320 IS15; transposase, IS6 family D IM40_07955 hypothetical protein K07483 K07483; transposase D IM40_08440 hypothetical protein K07483 K07483; transposase D IM40_09455 hypothetical protein K07483 K07483; transposase D IM40_09510 hypothetical protein K07483 K07483; transposase D IM40_10480 hypothetical protein K07483 K07483; transposase D IM40_10515 hypothetical protein K07483 K07483; transposase D IM40_10840 hypothetical protein K07483 K07483; transposase D IM40_10880 hypothetical protein K07483 K07483; transposase D IM40_02485 hypothetical protein K07483 K07483; transposase D IM40_02610 hypothetical protein K07483 K07483; transposase D IM40_11110 hypothetical protein K07483 K07483; transposase D IM40_11390 transposase K07486 K07486; transposase D IM40_07960 transposase K07486 K07486; transposase D IM40_08360 transposase K07486 K07486; transposase D IM40_08435 transposase K07486 K07486; transposase D IM40_08565 transposase K07486 K07486; transposase D IM40_09440 transposase K07486 K07486; transposase D IM40_10190 hypothetical protein K07486 K07486; transposase D IM40_10475 transposase K07486 K07486; transposase D IM40_10520 transposase K07486 K07486; transposase D IM40_10730 transposase K07486 K07486; transposase D IM40_10835 transposase K07486 K07486; transposase D IM40_11105 transposase K07486 K07486; transposase D IM40_11440 transposase K07486 K07486; transposase D IM40_01675 transposase K07486 K07486; transposase D IM40_02480 transposase K07486 K07486; transposase D IM40_02615 transposase K07486 K07486; transposase D IM40_05800 transposase K07486 K07486; transposase D IM40_02500 transposase K07497 K07497; putative transposase D IM40_05830 transposase K07497 K07497; putative transposase D IM40_08605 hypothetical protein K07497 K07497; putative transposase D IM40_09520 hypothetical protein K07497 K07497; putative transposase D IM40_10230 transposase K07497 K07497; putative transposase D IM40_10285 transposase K07497 K07497; putative transposase D IM40_10685 transposase K07497 K07497; putative transposase D IM40_10765 transposase K07497 K07497; putative transposase D IM40_08005 integrase K07498 K07498; putative transposase D IM40_10260 hypothetical protein K07498 K07498; putative transposase C 99979 Viral proteins C 99998 Others D IM40_04180 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D IM40_00335 hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D IM40_02920 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D IM40_06640 ATPase AAA K03301 TC.AAA; ATP:ADP antiporter, AAA family D IM40_01310 hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D IM40_02580 hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D IM40_05895 hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D IM40_01110 nucleoside:proton symporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D IM40_11455 hypothetical protein K03607 proQ; ProP effector D IM40_05415 GTP-binding protein TypA K06207 typA; GTP-binding protein D IM40_04795 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins C 99992 Structural proteins D IM40_07705 hypothetical protein K06142 hlpA; outer membrane protein D IM40_04315 hypothetical protein K07340 ybbJ; inner membrane protein D IM40_00665 hypothetical protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D IM40_04630 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D IM40_07735 hypothetical protein K05794 terC; tellurite resistance protein TerC D IM40_03055 hypothetical protein K06195 apaG; ApaG protein D IM40_07445 hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY B B 09194 Poorly characterized C 99996 General function prediction only D IM40_04660 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D IM40_06160 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein D IM40_06470 hypothetical protein K07001 K07001; NTE family protein D IM40_07650 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein D IM40_01200 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D IM40_01980 membrane protein K06890 K06890; uncharacterized protein D IM40_09545 hypothetical protein K06903 W; Bacteriophage baseplate protein W D IM40_09600 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D IM40_09590 hypothetical protein K06906 gpU; phage tail protein D IM40_09570 hypothetical protein K06907 FI; Bacteriophage tail sheath protein D IM40_09575 major tail tube protein K06908 FII; Bacteriophage tail tube protein D IM40_08080 ATPase K06921 K06921; uncharacterized protein D IM40_11005 hypothetical protein K06921 K06921; uncharacterized protein D IM40_05670 alpha/beta hydrolase K07018 K07018; uncharacterized protein D IM40_07965 hypothetical protein K07126 K07126; uncharacterized protein D IM40_00350 hypothetical protein K07157 K07157; uncharacterized protein D IM40_01395 hypothetical protein K08998 K08998; uncharacterized protein D IM40_01020 hypothetical protein K09005 K09005; uncharacterized protein D IM40_04415 hypothetical protein K09131 K09131; uncharacterized protein D IM40_03340 hypothetical protein K09706 K09706; uncharacterized protein D IM40_03740 hypothetical protein K09779 K09779; uncharacterized protein D IM40_11095 membrane protein K09779 K09779; uncharacterized protein D IM40_05390 hypothetical protein K09779 K09779; uncharacterized protein D IM40_00355 hypothetical protein K09791 K09791; uncharacterized protein D IM40_04830 hypothetical protein K09797 K09797; uncharacterized protein D IM40_01800 hypothetical protein K09862 K09862; uncharacterized protein D IM40_03000 hypothetical protein K09928 K09928; uncharacterized protein D IM40_03330 hypothetical protein K09985 K09985; uncharacterized protein D IM40_04945 cytoplasmic protein K09987 K09987; uncharacterized protein D IM40_00965 hypothetical protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024