+D GENES KO
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KEGG Orthology (KO) - Corynebacterium jeikeium
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cjk00010]
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D jk0449 pgi; Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI). K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D jk1308 unnamed protein product; Region start changed from 1547952 to 1548018 (66 bases) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D jk1453 fbp; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D jk0216 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D jk0999 tpi; Triosephosphate isomerase (EC 5.3.1.1) (TIM). K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D jk1001 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk0882 gapX; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk1000 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D jk1912 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D jk0772 putative pyruvate kinase-like protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0801 pyk; Pyruvate kinase (EC 2.7.1.40) (PK). K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0661 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D jk0707 sucB; dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0113 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D jk0202 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D jk0287 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk1086 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D jk0151 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D jk0206 putative PTS system IIabc component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:cjk00020]
D jk0426 gltA; Citrate synthase (EC 2.3.3.1). K01647 CS; citrate synthase [EC:2.3.3.1]
D jk0969 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D jk1693 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D jk1373 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0384 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D jk1928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D jk1927 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D jk1929 sdhC; Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D jk1454 fum; Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C). K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D jk0548 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D jk1151 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D jk0151 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D jk0661 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D jk0707 sucB; dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:cjk00030]
D jk0449 pgi; Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI). K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D jk0994 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD). K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D jk0996 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D jk0912 gnd; gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D jk1011 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D jk0992 tkt; Transketolase (EC 2.2.1.1) (TK). K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D jk0993 tal; Transaldolase (EC 2.2.1.2).,Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (By similarity). K00616 TALDO1; transaldolase [EC:2.2.1.2]
D jk0541 rpi; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D jk1923 deoC; Deoxyribose-phosphate aldolase (EC 4.1.2.4) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA). K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D jk2077 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk1493 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D jk0381 gntK; putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D jk0216 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D jk1453 fbp; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D jk1308 unnamed protein product; Region start changed from 1547952 to 1548018 (66 bases) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cjk00040]
D jk0173 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D jk1525 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D jk1011 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:cjk00051]
D jk1640 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D jk1641 pmmA; pmmA K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1675 pmmB; pmmB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1645 putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D jk1308 unnamed protein product; Region start changed from 1547952 to 1548018 (66 bases) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D jk1453 fbp; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D jk0216 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D jk0999 tpi; Triosephosphate isomerase (EC 5.3.1.1) (TIM). K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D jk0541 rpi; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cjk00052]
D jk0287 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D jk0291 galK; Galactokinase (EC 2.7.1.6) (Galactose kinase). K00849 galK; galactokinase [EC:2.7.1.6]
D jk0290 galT; Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase). K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D jk1098 galE; galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D jk1525 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D jk0127 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D jk1308 unnamed protein product; Region start changed from 1547952 to 1548018 (66 bases) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D jk1385 putative hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
D jk0173 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:cjk00500]
D jk1385 putative hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D jk1525 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D jk0930 putative beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D jk1383 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D jk1330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D jk1268 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D jk0596 malQ; putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D jk1329 glgE; putative alpha-amylase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D jk1384 glgA; putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D jk0206 putative PTS system IIabc component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D jk0780 glgX; glycogen operon protein K01214 ISA; isoamylase [EC:3.2.1.68]
D jk0778 treY; treY K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D jk0773 treZ; maltooligosyl trehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D jk0332 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D jk0330 otsB; trehalose-6-phosphate phophatase, biosynthetic K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D jk1930 putative trehalose/maltose hydrolase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D jk0449 pgi; Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI). K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cjk00520]
D jk0169 putative beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D jk0206 putative PTS system IIabc component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D jk2047 hypothetical protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D jk1735 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D jk1743 pmmC; pmmC K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D jk1492 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D jk0398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D jk1919 murB; UDP-N-acetylenolpyruvoylglucosamine reductase 2 (EC 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 2).,Cell wall formation (By similarity). K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D jk1086 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk1525 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D jk0173 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D jk0291 galK; Galactokinase (EC 2.7.1.6) (Galactose kinase). K00849 galK; galactokinase [EC:2.7.1.6]
D jk0290 galT; Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase). K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D jk1098 galE; galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D jk0127 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D jk0449 pgi; Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI). K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D jk1640 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D jk1641 pmmA; pmmA K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1675 pmmB; pmmB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1645 putative mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D jk1383 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cjk00620]
D jk0661 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D jk0707 sucB; dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0251 ack; Acetate kinase (EC 2.7.2.1) (Acetokinase). K00925 ackA; acetate kinase [EC:2.7.2.1]
D jk0250 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D jk0772 putative pyruvate kinase-like protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0801 pyk; Pyruvate kinase (EC 2.7.1.40) (PK). K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0405 accBC3; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1669 accBC2; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk0202 aldA; aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D jk0384 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D jk1705 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D jk0113 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D jk0715 poxB; pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D jk1046 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D jk0548 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D jk1151 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D jk1454 fum; Fumarate hydratase class II (EC 4.2.1.2) (Fumarase C). K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D jk0998 ppc; Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC).,Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D jk0151 pck; phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D jk1932 aceB; Malate synthase G (EC 2.3.3.9). K01638 aceB; malate synthase [EC:2.3.3.9]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk2002 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cjk00630]
D jk1933 aceA; aceA K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D jk1932 aceB; Malate synthase G (EC 2.3.3.9). K01638 aceB; malate synthase [EC:2.3.3.9]
D jk0548 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D jk0426 gltA; Citrate synthase (EC 2.3.3.1). K01647 CS; citrate synthase [EC:2.3.3.1]
D jk0969 acn; aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0405 accBC3; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1669 accBC2; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1994 katA; Catalase (EC 1.11.1.6).,Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. K03781 katE; catalase [EC:1.11.1.6]
D jk0666 pgp; putative phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk1465 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D jk0209 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D jk0210 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0211 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D jk1284 putative oxidoreductase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D jk1373 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
C 00640 Propanoate metabolism [PATH:cjk00640]
D jk0251 ack; Acetate kinase (EC 2.7.2.1) (Acetokinase). K00925 ackA; acetate kinase [EC:2.7.2.1]
D jk0250 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk1941 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk0405 accBC3; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1669 accBC2; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1665 prpC; methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D jk1666 prpD; methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D jk0113 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cjk00650]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0588 fadB2; fadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk1928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D jk1927 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D jk1929 sdhC; Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D jk0450 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk1473 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk0384 cat1; succinyl-CoA:Coenzyme A transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D jk1545 scoA; acyl-CoA:3-ketoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D jk1544 scoB; acyl-CoA:3-ketoacid CoA-transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D jk1300 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D jk1299 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D jk0157 alsD; Alpha-acetolactate decarboxylase (EC 4.1.1.5).,Converts acetolactate into acetoin which can be excreted by the cells. This may be a mechanism for controlling the internal pH of cells in the stationary stage. K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:cjk00660]
D jk1300 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D jk1299 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D jk0157 alsD; Alpha-acetolactate decarboxylase (EC 4.1.1.5).,Converts acetolactate into acetoin which can be excreted by the cells. This may be a mechanism for controlling the internal pH of cells in the stationary stage. K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D jk1221 leuC; leuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D jk1220 leuD; leuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D jk1288 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cjk00562]
D jk0010 acpA; putative acid phosphatase K01114 plc; phospholipase C [EC:3.1.4.3]
D jk1085 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D jk0792 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D jk2071 putative myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D jk0999 tpi; Triosephosphate isomerase (EC 5.3.1.1) (TIM). K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cjk00190]
D jk0914 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D jk1928 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D jk1927 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D jk1929 sdhC; Succinate dehydrogenase subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D jk0721 qcrA; ubiquinol-cytochrome C reductase iron-sulfur protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D jk0722 qcrB; ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D jk0720 qcrC; ubiquinol-cytochrome C reductase cytochrome C subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D jk0991 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D jk0717 ctaF; putative membrane protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D jk0719 ctaE; cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D jk0481 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D jk0716 ctaC; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D jk0989 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D jk1337 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D jk1335 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D jk1336 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D jk1338 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D jk1334 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D jk1341 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D jk1339 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D jk1340 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D jk0274 ppa; Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase). K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D jk1504 pvdS1; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D jk0269 pvdS2; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cjk00680]
D jk1465 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D jk0998 ppc; Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase) (PEPC).,Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D jk0548 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D jk0216 fda; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D jk1453 fbp; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D jk1308 unnamed protein product; Region start changed from 1547952 to 1548018 (66 bases) K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D jk0251 ack; Acetate kinase (EC 2.7.2.1) (Acetokinase). K00925 ackA; acetate kinase [EC:2.7.2.1]
D jk0250 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D jk1912 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D jk1291 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D jk0425 serC; serC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D jk0483 serB; Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase). K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cjk00910]
D jk0070 putative dioxygenase related to 2-nitropropane dioxygenases K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D jk1192 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0076 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D jk0077 gltD; glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D jk0303 bca; beta-type carbonic anhydrase-like protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cjk00920]
D jk0247 cysN; sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D jk0246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D jk0444 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D jk0245 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D jk0243 cysI; sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D jk0205 sseB; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk1668 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk0393 cysE; Serine acetyltransferase (EC 2.3.1.30) (SAT). K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D jk0394 cysK; Cysteine synthase chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B). K01738 cysK; cysteine synthase [EC:2.5.1.47]
D jk1695 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D jk0055 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cjk00061]
D jk0405 accBC3; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1669 accBC2; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk0659 acpM; acpM K02078 acpP; acyl carrier protein
D jk0822 fabG2; dehydrogenase related to short-chain alcohol dehydrogenases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D jk1915 fadD6; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk2042 fadD7; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0597 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cjk00071]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk1941 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D jk0296 fadE4; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk1479 fadE7; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk0229 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk0194 fadE1; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D jk1915 fadD6; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk2042 fadD7; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0597 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk1916 alkM; alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cjk00561]
D jk1671 glpK; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D jk0862 conserved hypothetical protein K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D jk0050 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D jk0729 plsC; plsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D jk1947 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D jk0133 cmtB; trehalose corynomycolyl transferase B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122]
D jk0344 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:cjk00564]
D jk1218 gpsA1; gpsA1 K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D jk0050 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D jk0729 plsC; plsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D jk1947 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D jk0010 acpA; putative acid phosphatase K01114 plc; phospholipase C [EC:3.1.4.3]
D jk0114 ugpQ; ugpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D jk0886 glpQ; glpQ K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D jk1171 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D jk1124 pgsA2; pgsA2 K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D jk1064 pgsA1; Hypothetical protein PH0460.,InterPro: CDP-alcohol phosphatidyltransferase,pgsA: CDP-diacylglycerol--glycerol-3-p K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D jk0258 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D jk0010 acpA; putative acid phosphatase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:cjk00600]
D jk1103 asa; putative N-acylsphingosine amidohydrolase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cjk00592]
D jk1941 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:cjk01040]
D jk1941 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D jk1059 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cjk00230]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk1493 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D jk0358 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D jk0346 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D jk1557 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D jk0239 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D jk0355 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D jk0353 purS; phosphoribosylformylglycinamidine synthetase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D jk0354 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D jk0359 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D jk1659 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D jk1658 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D jk0350 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D jk0349 purB; Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) (ASL) (ASASE). K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D jk1556 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D jk1049 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D jk1044 putative 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D jk1674 deoD; Purine nucleoside phosphorylase I (EC 2.4.2.1) (PNP I) (PU-NPASE I) (Inosine phosphorylase).,Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules. K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D jk0754 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D jk0233 iunH1; putative inosine-uridine preferring nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D jk2078 iunH2; putative inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D jk0277 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D jk1722 guaB2; putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D jk1723 guaB1; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D jk0554 ndk; Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP kinase) (Nucleoside-2-P kinase).,Major role in the synthesis of nucleoside triphosphates other than ATP. K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D jk0499 putative xanthosine triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D jk0976 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D jk1720 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D jk1019 gmk; Guanylate kinase (EC 2.7.4.8) (GMP kinase).,Essential for recycling GMP and indirectly cGMP (By similarity). K00942 gmk; guanylate kinase [EC:2.7.4.8]
D jk0478 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D jk0225 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D jk0480 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D jk0619 dgt; Deoxyguanosinetriphosphate triphosphohydrolase-like protein. K01129 dgt; dGTPase [EC:3.1.5.1]
D jk1048 rel; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D jk1480 ppx2; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D jk1908 ppx1; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D jk1952 cya; adenylate cyclase, putative K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D jk0222 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D jk1687 add; add K01488 add; adenosine deaminase [EC:3.5.4.4]
D jk1765 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D jk0464 putative secreted protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D jk1065 conserved hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D jk0247 cysN; sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D jk0246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cjk00240]
D jk1022 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D jk1023 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D jk1025 pyrB; Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase). K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D jk1024 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D jk0959 pyrD1; pyrD1 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D jk0365 pyrD2; Dihydroorotate dehydrogenase (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) (DHODase) (DHOD). K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D jk0213 pyrE; Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRT) (OPRTase). K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D jk1021 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D jk1173 pyrH; Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase).,Catalyzes the phosphorylation of UMP to UDP (By similarity). K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D jk0554 ndk; Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP kinase) (Nucleoside-2-P kinase).,Major role in the synthesis of nucleoside triphosphates other than ATP. K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D jk1664 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D jk0871 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D jk1044 putative 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D jk2078 iunH2; putative inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D jk1676 upp; Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase). K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D jk1026 pyrR; putative pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D jk0174 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D jk0478 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D jk0225 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D jk0480 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D jk1636 tmk; Thymidylate kinase (EC 2.7.4.9) (dTMP kinase).,Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (By similarity). K00943 tmk; dTMP kinase [EC:2.7.4.9]
D jk1082 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D jk0441 thyA; Thymidylate synthase (EC 2.1.1.45) (TS) (TSase). K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D jk1130 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cjk00250]
D jk0762 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D jk0714 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D jk0175 aspC; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D jk0951 aspA; Aspartate ammonia-lyase (EC 4.3.1.1) (Aspartase). K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D jk0847 argG; Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase). K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D jk0848 argH; Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL). K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D jk0222 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D jk0349 purB; Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) (ASL) (ASASE). K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D jk1025 pyrB; Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase). K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D jk0450 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk1473 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk0076 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D jk0077 gltD; glutamate synthase (NADPH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D jk1192 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D jk0454 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk1022 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D jk1023 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D jk0354 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D jk1735 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D jk0358 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cjk00260]
D jk1998 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D jk1997 asd; Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH). K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D jk1352 hom; Homoserine dehydrogenase (EC 1.1.1.3) (HDH). K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D jk1350 thrB; Homoserine kinase (EC 2.7.1.39) (HK). K00872 thrB; homoserine kinase [EC:2.7.1.39]
D jk1351 thrC; thrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D jk1465 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D jk1912 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D jk1291 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D jk0425 serC; serC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D jk0483 serB; Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase). K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D jk0209 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D jk0210 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0211 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D jk1189 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D jk1187 gbsA; putative betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D jk1981 cysY; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D jk1506 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D jk1313 ilvA; Threonine dehydratase (EC 4.3.1.19),Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine followed by rehydration and liberation of ammonia. K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D jk0799 trpA; Tryptophan synthase alpha chain (EC 4.2.1.20).,The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D jk0798 trpB; Tryptophan synthase beta chain (EC 4.2.1.20).,The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cjk00270]
D jk0393 cysE; Serine acetyltransferase (EC 2.3.1.30) (SAT). K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D jk0394 cysK; Cysteine synthase chloroplast precursor (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase B) (CS-B) (OAS-TL B). K01738 cysK; cysteine synthase [EC:2.5.1.47]
D jk0592 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D jk1981 cysY; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D jk0234 metE; methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D jk1016 metK; metK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D jk0754 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D jk1858 modC; putative DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D jk1637 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D jk1998 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D jk1997 asd; Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH). K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D jk1352 hom; Homoserine dehydrogenase (EC 1.1.1.3) (HDH). K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D jk1695 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D jk0055 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D jk1694 metY; O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D jk0710 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D jk0205 sseB; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk1668 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk0113 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D jk0548 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D jk1506 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D jk1291 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D jk0425 serC; serC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cjk00280]
D jk0710 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0296 fadE4; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk1479 fadE7; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk0229 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D jk1549 fadE8; acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk0405 accBC3; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1669 accBC2; acyl-CoA carboxylase, alpha subunit K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D jk1550 accBC1; acyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D jk1551 accD1; acyl-CoA carboxylase, beta subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D jk1545 scoA; acyl-CoA:3-ketoacid CoA-transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D jk1544 scoB; acyl-CoA:3-ketoacid CoA-transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cjk00290]
D jk1313 ilvA; Threonine dehydratase (EC 4.3.1.19),Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine followed by rehydration and liberation of ammonia. K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D jk1221 leuC; leuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D jk1220 leuD; leuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D jk1288 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D jk1300 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D jk1299 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D jk1298 ilvC; Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase). K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D jk1303 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D jk0710 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D jk0175 aspC; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D jk2002 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cjk00300]
D jk1352 hom; Homoserine dehydrogenase (EC 1.1.1.3) (HDH). K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D jk1998 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D jk1997 asd; Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH). K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D jk1129 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D jk1131 dapB; Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR). K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D jk1392 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D jk0844 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D jk1390 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D jk1110 dapF; Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase). K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D jk1353 lysA; Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP decarboxylase). K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D jk1980 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D jk0745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D jk0746 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cjk00310]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0194 fadE1; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0450 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk1473 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:cjk00220]
D jk0845 argF; Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase). K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D jk0847 argG; Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase). K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D jk0848 argH; Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL). K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D jk0354 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk1192 gdh; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D jk0175 aspC; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D jk0842 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D jk0260 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D jk0843 argB; Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK) (N-acetyl-L-glutamate 5-phosphotransferase). K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D jk0841 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D jk0844 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cjk00330]
D jk0917 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0118 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk1906 proC; Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase). K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D jk0454 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D jk0563 proB; Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK).,Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5-oxoproline. K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D jk0565 proA; Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase).,Catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cjk00340]
D jk0952 hisG; hisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D jk0794 hisI; Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (PRA-CH). K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D jk0791 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D jk0790 hisH; amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D jk0793 hisF; imidazoleglycerol-phosphate synthase cyclase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D jk0788 hisB; Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD). K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0451 putative monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D jk0786 hisD; Histidinol dehydrogenase (EC 1.1.1.23) (HDH).,Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine (By similarity). K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cjk00350]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0450 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk1473 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk0312 putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5]
C 00360 Phenylalanine metabolism [PATH:cjk00360]
D jk1463 echA3; enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0588 fadB2; fadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0917 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0118 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:cjk00380]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0194 fadE1; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0917 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0118 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk1994 katA; Catalase (EC 1.11.1.6).,Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide. K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cjk00400]
D jk0732 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D jk1031 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D jk1030 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D jk1032 aroK; Shikimate kinase (EC 2.7.1.71) (SK). K00891 aroK; shikimate kinase [EC:2.7.1.71]
D jk1625 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D jk1033 aroC; Chorismate synthase (EC 4.2.3.5) (5-enolpyruvylshikimate-3-phosphate phospholyase). K01736 aroC; chorismate synthase [EC:4.2.3.5]
D jk0795 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D jk0718 trpD; Anthranilate phosphoribosyltransferase 1 (EC 2.4.2.18). K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D jk0791 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D jk0797 trpC; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS). K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D jk0799 trpA; Tryptophan synthase alpha chain (EC 4.2.1.20).,The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D jk0798 trpB; Tryptophan synthase beta chain (EC 4.2.1.20).,The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine. K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D jk1565 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D jk2025 tyrA; Prephenate dehydrogenase (EC 1.3.1.12) (PDH). K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D jk0119 pheA; Prephenate dehydratase (EC 4.2.1.51) (PDT). K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cjk00410]
D jk0292 panD; Aspartate 1-decarboxylase precursor (EC 4.1.1.11) (Aspartate alpha-decarboxylase). K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D jk0590 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D jk0286 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk1941 acx; acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:cjk00430]
D jk0590 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D jk0250 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D jk0251 ack; Acetate kinase (EC 2.7.2.1) (Acetokinase). K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cjk00450]
D jk0055 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D jk0592 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D jk0234 metE; methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D jk0981 sufS; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D jk2093 trxB; Thioredoxin reductase (EC 1.8.1.9) (TRXR) (TR). K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D jk0247 cysN; sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D jk0246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D jk1516 metS; Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS).,Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity). K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cjk00460]
D jk0930 putative beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D jk0762 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D jk1465 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cjk00470]
D jk1734 alr; Alanine racemase (EC 5.1.1.1).,Provides the D-alanine required for cell wall biosynthesis (By similarity). K01775 alr; alanine racemase [EC:5.1.1.1]
D jk1217 ddlA2; putative D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0921 ddlA1-N; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0922 ddlA1-C; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0354 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D jk0496 murI; Glutamate racemase (EC 5.1.1.3).,Provides the (R)-glutamate required for cell wall biosynthesis (By similarity). K01776 murI; glutamate racemase [EC:5.1.1.3]
D jk0748 murD; murD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D jk1110 dapF; Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase). K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D jk1353 lysA; Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP decarboxylase). K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D jk1980 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cjk00480]
D jk0407 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D jk0264 hypothetical protein K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D jk1387 pepA; leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D jk0709 pepB; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D jk0539 pepN; Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase) (Lys-AP) (Alanine aminopeptidase).,Aminopeptidase with broad substrate specificity to several peptides. Shows strong preference for leucine but cleaves also next to Arg and lysine in peptide-bond-containing substrates. K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D jk1693 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D jk0912 gnd; gnd K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D jk0994 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD). K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cjk00515]
D jk1519 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cjk00514]
D jk1519 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cjk00542]
D jk1343 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cjk00541]
D jk1525 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D jk1098 galE; galE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D jk0127 glf; glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D jk0173 udgA; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D jk1882 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D jk1888 rmlB; dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D jk1883 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D jk1640 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D jk1641 pmmA; pmmA K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1675 pmmB; pmmB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D jk1492 glmU; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:cjk00550]
D jk0398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D jk1919 murB; UDP-N-acetylenolpyruvoylglucosamine reductase 2 (EC 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 2).,Cell wall formation (By similarity). K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D jk0751 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D jk0748 murD; murD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D jk0745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D jk1217 ddlA2; putative D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0921 ddlA1-N; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0922 ddlA1-C; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0746 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D jk0610 uppS2; uppS2 K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D jk0367 uppP2; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk0957 uppP1; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk0747 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D jk0750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D jk0744 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D jk0039 pbp2A; putative penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D jk0275 pbp4; putative penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D jk2007 putative UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D jk2008 hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cjk00552]
D jk0367 uppP2; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk0957 uppP1; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk1343 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cjk00543]
D jk1343 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D jk0393 cysE; Serine acetyltransferase (EC 2.3.1.30) (SAT). K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cjk00730]
D jk0855 thiC; Thiamine biosynthesis protein thiC.,Required for the synthesis of the hydromethylpyrimidine (HMP) moiety of thiamine (4-amino-2-methyl-5-hydroxymethylpyrimidine) (By similarity). K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D jk0297 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D jk1321 iscS; cysteine desulfurase (iron-sulfur cofactor synthesis protein) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D jk0852 thiO; amino acid oxidase flavoprotein ThiO, putative K03153 thiO; glycine oxidase [EC:1.4.3.19]
D jk1078 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D jk0850 thiG; thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D jk0854 thiE; Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase).,Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate (THZ-P) and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (By similarity). K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D jk1215 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D jk1626 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D jk1765 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cjk00740]
D jk1008 ribA; GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D jk1010 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D jk1948 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D jk1007 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D jk1009 ribC; Riboflavin synthase alpha chain (EC 2.5.1.9).,Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1-D)-ribityl-amino-24(1H3H)-pyrimidinedione and L-34-dihydrohy-2-butanone-4-phosphate via 67-dimethyl-8-lumazine. The alpha subunit catalyzes the dismutation of 67-dimethyl-8-lumazine to riboflavin and 5-amino-6-(1-D)-ribityl-amino-24(1H3H)-pyrimidinedione (By similarity). K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D jk1136 ribF; riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:cjk00750]
D jk0425 serC; serC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D jk1351 thrC; thrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D jk1060 putative pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D jk1058 putative amidotransferase involved in pyridoxine biosynthesis K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cjk00760]
D jk0783 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D jk0784 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D jk0492 putative nicotinic acid phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D jk1674 deoD; Purine nucleoside phosphorylase I (EC 2.4.2.1) (PNP I) (PU-NPASE I) (Inosine phosphorylase).,Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules. K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D jk1044 putative 5'-nucleotidase family protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D jk0567 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D jk0474 nadE; NAD-synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D jk1123 putative competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D jk1464 pncA; pyrazinamidase / nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D jk0065 hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D jk0865 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D jk0450 putative NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D jk1473 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:cjk00770]
D jk1300 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D jk1299 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D jk1298 ilvC; Ketol-acid reductoisomerase (EC 1.1.1.86) (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase). K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D jk1303 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D jk0674 panB; panB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D jk0286 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D jk1466 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D jk1017 dfp; phosphopantothenate cysteine ligase / 4'-phospho-pantothenoyl-cysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D jk1209 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D jk0825 coaE; Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase).,Catalyzes the phosphorylation of the 3-hydroxyl group of dephosphocoenzyme A to form coenzyme A (By similarity). K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D jk0710 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D jk0292 panD; Aspartate 1-decarboxylase precursor (EC 4.1.1.11) (Aspartate alpha-decarboxylase). K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cjk00780]
D jk0822 fabG2; dehydrogenase related to short-chain alcohol dehydrogenases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D jk0682 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D jk1661 birA; biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cjk00785]
D jk0706 lipB; Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier protein]-protein -N-lipoyltransferase) (Lipoate-protein ligase B).,Catalyzes the transfer of the endogenously synthesized lipoate to apoproteins creating an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoate-dependent enzymes. Utilizes lipoyl-acyl-carrier protein as a source of lipoyl groups although octanoyl groups from octanoyl-ACP can also be transferred to the lipoyl domain of apoproteins (By similarity). K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D jk0705 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk0661 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D jk0707 sucB; dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D jk1373 sucA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D jk0209 gcvP; glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D jk0210 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D jk0211 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cjk00790]
D jk0279 folE; folE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D jk1287 putative phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D jk0107 phoD; Alkaline phosphatase D precursor (EC 3.1.3.1) (APaseD). K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D jk0281 folX; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D jk0282 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D jk0280 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D jk0440 folA; folA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D jk0551 folC; dihydrofolate synthase / folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D jk1008 ribA; GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D jk0036 pabA; para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D jk0031 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D jk0373 putative aminotransferase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D jk1598 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D jk1594 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D jk1597 moaE; molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D jk1524 moeA1; molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D jk1595 moeA2; molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:cjk00670]
D jk0440 folA; folA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D jk0881 fhs; Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS). K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D jk1697 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D jk1465 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D jk1557 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D jk1556 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D jk1013 fmt; Methionyl-tRNA formyltransferase (EC 2.1.2.9).,Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity). K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D jk1777 fxbA; putative formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D jk0210 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D jk0441 thyA; Thymidylate synthase (EC 2.1.1.45) (TS) (TSase). K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D jk1130 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D jk0737 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D jk1526 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cjk00860]
D jk1281 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk2018 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk1902 hemA; Glutamyl-tRNA reductase (EC 1.2.1.-) (GluTR). K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D jk1895 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D jk1899 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D jk1901 hemC; Porphobilinogen deaminase (EC 2.5.1.61) (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase).,Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane preuroporphyrinogen in several discrete steps. K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D jk1075 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D jk1074 hemG; Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO).,Catalyzes the 6-electron oxidation of protoporphyrinogen IX to form protoporphyrin IX. Also oxidizes the pathway intermediate coproporphyrinogen III. K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D jk1996 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D jk1073 conserved hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D jk1900 hemD; uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D jk1149 cobA; uroporphyrinogen-III methylase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D jk0991 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D jk0989 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D jk0711 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D jk0669 rnhA; rnhA K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D jk0320 hmuO; Heme oxygenase (EC 1.14.99.3).,Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety. K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D jk1434 mco; multicopper oxidase K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cjk00130]
D jk1865 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D jk1285 menF; putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D jk1868 menD; 2-oxoglutarate decarboxylase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D jk1869 menC; O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D jk1876 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D jk1870 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D jk0913 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D jk1877 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cjk00900]
D jk1078 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D jk1167 ispC; ispC K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D jk0308 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D jk1510 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D jk0309 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D jk1165 ispG; 4-hydroxy-3-methylbut-2-enyl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D jk1449 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0736 putative polyprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D jk1467 uppS1; uppS1 K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D jk0610 uppS2; uppS2 K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cjk00906]
D jk0515 crtB; putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D jk0735 crtI; phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D jk0978 hypothetical protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:cjk00907]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D jk0992 tkt; Transketolase (EC 2.2.1.1) (TK). K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cjk00523]
D jk1882 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D jk1888 rmlB; dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D jk1883 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cjk01053]
D jk1285 menF; putative isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D jk1819 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D jk1814 mbtG; L-lysine 6-monooxygenase K04793 mbtG; mycobactin lysine-N-oxygenase
C 01055 Biosynthesis of vancomycin group antibiotics
D jk1888 rmlB; dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cjk00946]
D jk0930 putative beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D jk0411 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cjk00332]
D jk0563 proB; Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK).,Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5-oxoproline. K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D jk0565 proA; Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase).,Catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cjk00261]
D jk1783 hypothetical protein K05375 mbtH; MbtH protein
D jk0247 cysN; sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D jk0246 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D jk1998 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D jk1997 asd; Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (ASA dehydrogenase) (ASADH). K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D jk1129 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D jk1131 dapB; Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR). K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cjk00521]
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D jk0468 pgm; Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase) (PGM).,This enzyme participates in both the breakdown and synthesis of glucose. K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D jk2071 putative myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D jk1085 suhB; putative myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D jk0792 impA; inositol monophosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D jk1882 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D jk1888 rmlB; dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D jk1883 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D jk0728 glk; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cjk00525]
D jk1882 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D jk1888 rmlB; dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cjk00401]
D jk2025 tyrA; Prephenate dehydrogenase (EC 1.3.1.12) (PDH). K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D jk0795 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D jk0822 fabG2; dehydrogenase related to short-chain alcohol dehydrogenases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D jk0659 acpM; acpM K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cjk00999]
D jk1016 metK; metK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D jk0930 putative beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cjk00362]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D jk0194 fadE1; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0588 fadB2; fadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cjk00627]
D jk2063 putative flavin-binding monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-]
D jk0917 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0118 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:cjk00643]
D jk0917 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D jk0118 putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:cjk00930]
D jk1916 alkM; alkane-1 monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D jk0395 echA1; enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D jk0159 fadB1; fadB1 K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D jk0629 choE; putative cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cjk03020]
D jk1846 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D jk1845 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D jk1758 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D jk1018 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D jk0409 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk0413 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cjk03010]
D jk0820 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D jk1175 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D jk1827 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D jk1759 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D jk1794 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D jk2066 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D jk1841 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D jk1797 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D jk1744 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D jk1834 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D jk1760 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D jk1842 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D jk1761 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D jk1537 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D jk1135 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D jk1193 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D jk1824 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D jk1538 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D jk1829 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D jk0575 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D jk1859 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D jk1830 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D jk1833 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D jk1832 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D jk1799 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D jk1796 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D jk1848 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D jk2064 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D jk1849 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D jk1860 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D jk1745 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D jk1801 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D jk1792 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D jk1826 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D jk1757 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D jk1795 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D jk1184 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D jk0836 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D jk0557 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D jk1828 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D jk1831 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D jk1800 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D jk1494 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D jk0558 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D jk1535 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D jk1825 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D jk1793 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D jk1534 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D jk1533 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D jk1536 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D jk2104 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D jk0835 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D jk0475 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D rrsA 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsB 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsC hypothetical_rRNA; hypothetical rRNA K01977 16SrRNA; 16S ribosomal RNA
D rrlC 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlB 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlA 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrfA 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfB 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfC 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cjk00970]
D tRNA0012 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA0002 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA0047 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0048 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0011 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0035 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0016 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0019 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA0008 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA0009 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA0029 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA0034 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA0037 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA0032 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0033 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0007 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0026 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0028 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0031 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0017 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0005 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0015 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA0001 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA0013 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0024 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0036 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0022 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0003 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0014 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA0006 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA0020 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0038 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0040 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0010 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA0018 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0023 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0044 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0049 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0046 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0050 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0045 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0043 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0041 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0004 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0039 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA0042 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA0021 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0030 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0027 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0025 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D jk1281 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk2018 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk1311 gatA; glutamyl-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D jk1306 gatB; glutamyl-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D jk1038 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D jk1041 aspS; Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS). K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D jk0613 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D jk1066 thrS; Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS). K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D jk0123 serS; Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS). K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D jk0313 cysS3; cysS3 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D jk1516 metS; Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS).,Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity). K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D jk1013 fmt; Methionyl-tRNA formyltransferase (EC 2.1.2.9).,Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by: (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (By similarity). K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D jk1777 fxbA; putative formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D jk0550 valS; Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS). K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D jk2075 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D jk0760 ileS; Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS). K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D jk0294 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1200 lysX; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1354 argS; Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS). K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D jk1147 proS; Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase) (ProRS). K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D jk1045 hisS; Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS). K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D jk0839 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D jk0840 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D jk0860 tyrS; Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS). K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D jk1689 trpS; Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cjk03060]
D jk1766 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D jk1862 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D jk0997 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D jk1052 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D jk1051 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D jk1053 secN; preprotein translocase SecN subunit K03210 yajC; preprotein translocase subunit YajC
D jk2101 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0102 putative preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0902 secA2; preprotein translocase SecA2 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1630 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1195 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D jk1198 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D jk0942 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D jk1378 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D jk0941 tatC; sec-independant protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
D jk1183 unnamed protein product; Region start changed from 1382599 to 1382581 (-18 bases) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D jk0765 lspA; lspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cjk04122]
D jk1321 iscS; cysteine desulfurase (iron-sulfur cofactor synthesis protein) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D jk0205 sseB; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk1668 sseA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D jk1320 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D jk1597 moaE; molybdenum cofactor biosynthesis protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D jk1598 moaA; molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D jk0849 thiF; dinucleotide-utilizing enzyme involved in thiamine biosynthesis K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D jk1594 moaC; molybdenum cofactor biosynthesis protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D jk0851 thiS; thiamin biosynthesis ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
D jk0948 putative ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:cjk03018]
D jk0556 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D jk1132 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D jk1366 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D jk1347 rho; rho K03628 rho; transcription termination factor Rho
D jk1128 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D jk0179 dnaK; molecular chaperone protein K04043 dnaK; molecular chaperone DnaK
D jk1728 groEL1; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0267 groEL2; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk1504 pvdS1; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D jk0269 pvdS2; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D jk2088 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cjk03030]
D jk0723 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2003 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0693 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0771 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk1315 dnaQ2; DNA polymerase III, epsilon subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk2012 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D jk1951 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D jk0573 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D jk0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D jk2062 dnaB; Replicative DNA helicase (EC 3.6.1.-) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D jk0630 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk0669 rnhA; rnhA K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D jk1182 rnhB; Ribonuclease HII (EC 3.1.26.4) (RNase HII).,This enzyme is an endonuclease that degrades the RNA of RNA-DNA hybrids specifically (By similarity). K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cjk03410]
D jk1971 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D jk1214 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D jk0302 mutY; putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D jk0054 alkA; alkA K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D jk1205 mutM; Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase).,This enzyme may play a significant role in processes leading to recovery from mutagenesis and/or cell death by alkylating agents. Also involved in the go system responsible for removing an oxidatively damaged form of guanine (78-dihydro-8-oxoguanine = 7-OxoG) from DNA. Can also nick DNA at apurinic/apyrimidinic sites (AP sites) (By similarity). K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D jk0446 nei; putative endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D jk0074 tagA; DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D jk0259 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D jk1691 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cjk03420]
D jk1490 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D jk1304 uvrA2; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D jk0832 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D jk0827 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D jk1005 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D jk1564 pcrA; putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1609 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1611 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1248 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D jk0409 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk0413 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:cjk03430]
D jk1564 pcrA; putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1609 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1611 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1248 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1450 xseA; exodeoxyribonuclease large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D jk1451 xseB; exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk0771 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk1315 dnaQ2; DNA polymerase III, epsilon subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D jk2012 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D jk0573 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D jk1951 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D jk0723 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2003 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0693 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cjk03440]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D jk0609 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D jk2010 recR; recombination protein K06187 recR; recombination protein RecR
D jk1116 recA; recombinase A K03553 recA; recombination protein RecA
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1055 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D jk1054 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D jk1056 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D jk1212 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0030 putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0129 putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0771 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk1315 dnaQ2; DNA polymerase III, epsilon subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D jk2012 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D jk0573 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D jk1951 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D jk0723 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2003 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0693 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk1015 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:cjk03250]
D jk0033 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cjk02010]
D jk1591 molA; putative molybdate ABC transport system, solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D jk1592 molB; putative molybdate ABC transport system, permease protein K02018 modB; molybdate transport system permease protein
D jk1593 molC; putative molybdate ABC transport system, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D jk0377 pstS; phosphate ABC transport system, solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D jk0378 pstC; phosphate ABC transport system, permease protein K02037 pstC; phosphate transport system permease protein
D jk0379 pstA; phosphate ABC transport system, permease protein K02038 pstA; phosphate transport system permease protein
D jk0380 pstB; phosphate ABC transport system, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D jk0655 gluB; glutamate ABC transport system, solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D jk0656 gluC; glutamate ABC transport system, permease protein K10006 gluC; glutamate transport system permease protein
D jk0657 gluD; glutamate ABC transport system, permease protein K10007 gluD; glutamate transport system permease protein
D jk0654 gluA; glutamate ABC transport system, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D jk1710 putative ABC transport system, solute-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D jk1712 putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein
D jk1711 putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D jk1812 putative iron ABC transport system, solute-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1776 putative iron ABC transport system, solute binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1809 fecS; putative iron ABC transport system, solute-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1772 fhuB; putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D jk1816 fepB; putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D jk1773 fhuC; putative iron ABC transport system, permease protein K23187 fepG; iron-siderophore transport system permease protein
D jk1817 fepC; putative iron ABC transport system, permease protein K23187 fepG; iron-siderophore transport system permease protein
D jk1774 fhuA; putative iron ABC transport system, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D jk1818 fepA; putative iron ABC transport system, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D jk1486 mntA; manganese ABC transport system, solute-binding protein K11601 mntC; manganese transport system substrate-binding protein
D jk1488 mntC; manganese ABC transport system, permease protein K11602 mntB; manganese transport system permease protein
D jk1487 mntB; manganese ABC transport system, ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D jk1118 putative BioY family protein K03523 bioY; biotin transport system substrate-specific component
D jk1120 putative ABC transport system, permease protein K16783 bioN; biotin transport system permease protein
D jk1119 putative ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D jk0236 putative ABC transport system, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D jk0435 putative ABC transport system, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D jk2036 putative ABC transport system, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D jk2037 putative ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D jk1163 putative ABC transport system, permease protein K09813 hrtB; hemin transport system permease protein
D jk1421 putative ABC transport system, permease protein K09813 hrtB; hemin transport system permease protein
D jk1422 putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D jk1164 putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D jk0457 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D jk0456 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D jk0437 putative ABC transport system K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D jk0438 putative ABC transport system K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:cjk02060]
D jk0206 putative PTS system IIabc component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cjk03070]
D jk1052 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D jk1051 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D jk1862 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D jk0997 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D jk1766 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D jk1053 secN; preprotein translocase SecN subunit K03210 yajC; preprotein translocase subunit YajC
D jk2101 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0102 putative preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0902 secA2; preprotein translocase SecA2 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1630 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1198 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D jk1195 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D jk0942 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D jk1378 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D jk0941 tatC; sec-independant protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cjk02020]
D jk1287 putative phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D jk0107 phoD; Alkaline phosphatase D precursor (EC 3.1.3.1) (APaseD). K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D jk1911 tcsS8; two-component system sensor kinase TcsS8 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D jk1910 tcsR8; two-component system response regulator TcsR8 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D jk0377 pstS; phosphate ABC transport system, solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D jk1272 kdpD; two-component system sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D jk1273 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D jk1269 kdpA; Potassium-transporting ATPase A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D jk1270 kdpB; potassium-transporting ATPase B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D jk1271 kdpC; potassium-transporting ATPase C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D jk0989 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D jk1531 tcsS5; two-component system sensor kinase TcsS5 K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D jk1532 tcsR5; two-component system response regulator TcsR5 K07669 mprA; two-component system, OmpR family, response regulator MprA
D jk1530 putative serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D jk1634 mtrB; two-component system sensor kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D jk1635 mtrA; two-component system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D jk0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D jk1486 mntA; manganese ABC transport system, solute-binding protein K11601 mntC; manganese transport system substrate-binding protein
D jk1487 mntB; manganese ABC transport system, ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D jk1488 mntC; manganese ABC transport system, permease protein K11602 mntB; manganese transport system permease protein
D jk1547 citE; putative citrate lyase beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D jk0888 tcsS2; two-component system sensor kinase TcsS2 K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D jk0887 tcsR2; two-component system response regulator TcsR2 K07693 desR; two-component system, NarL family, response regulator DesR
D jk1962 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D jk1961 putative membrane protein K12510 tadB; tight adherence protein B
D jk1196 glnK; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk1314 dctA; putative Na+/H+-dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D jk0199 putative membrane protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D jk0198 putative membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D jk1972 glxR; putative transcriptional regulator (Crp family) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D jk0665 ptpA; low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cjk02024]
D jk0795 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D jk0732 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D jk1273 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D jk2032 surA; putative cell surface protein K20276 bapA; large repetitive protein
D jk1915 fadD6; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk2042 fadD7; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0597 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk1972 glxR; putative transcriptional regulator (Crp family) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D jk1010 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D jk1050 dciAE; conserved ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D jk2101 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0102 putative preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk1862 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D jk0997 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D jk1766 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D jk1053 secN; preprotein translocase SecN subunit K03210 yajC; preprotein translocase subunit YajC
D jk0902 secA2; preprotein translocase SecA2 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1630 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1198 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D jk1195 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D jk0010 acpA; putative acid phosphatase K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D jk1087 sigA; RNA polymerase sigma factor A K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cjk01501]
D jk0169 putative beta-glucosidase-related glycosidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D jk0411 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D jk0744 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cjk01502]
D jk1217 ddlA2; putative D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0921 ddlA1-N; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0922 ddlA1-C; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk1734 alr; Alanine racemase (EC 5.1.1.1).,Provides the D-alanine required for cell wall biosynthesis (By similarity). K01775 alr; alanine racemase [EC:5.1.1.1]
D jk0746 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D jk0747 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D jk0750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cjk01503]
D jk2095 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D jk0033 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cjk01000]
C 01001 Protein kinases [BR:cjk01001]
D jk0252 pknG; serine/threonine protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D jk0037 pknB; serine/threonine protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D jk0733 pknL; serine/threonine protein kinase PknL K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D jk0038 pknA; serine/threonine protein kinase PknA K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D jk1732 pknJ; serine/threonine protein kinase PknJ K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D jk1911 tcsS8; two-component system sensor kinase TcsS8 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D jk1272 kdpD; two-component system sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D jk1531 tcsS5; two-component system sensor kinase TcsS5 K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D jk1634 mtrB; two-component system sensor kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D jk0342 tcsS1; two-component system sensor kinase TcsS1 K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D jk0888 tcsS2; two-component system sensor kinase TcsS2 K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cjk01009]
D jk1637 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D jk0041 ppp; ppp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D jk0483 serB; Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase). K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cjk01002]
D jk0765 lspA; lspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
D jk1034 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D jk0976 hypothetical protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D jk1720 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D jk0726 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk1678 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk0725 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk0967 putative cell wall-associated hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D jk0358 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D jk0076 gltB; glutamate synthase (NADPH) large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D jk1735 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D jk0714 asnB; asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D jk1700 srtA; putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D jk0103 srtB; putative sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D jk0117 putative membrane protein K07052 K07052; CAAX protease family protein
D jk0539 pepN; Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase) (Lys-AP) (Alanine aminopeptidase).,Aminopeptidase with broad substrate specificity to several peptides. Shows strong preference for leucine but cleaves also next to Arg and lysine in peptide-bond-containing substrates. K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D jk0594 dcp; peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D jk0081 putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D jk1387 pepA; leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D jk0709 pepB; putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D jk1390 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D jk0266 putative peptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23]
D jk1159 mapB; Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase M).,Removes the amino-terminal methionine from nascent proteins (By similarity). K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D jk1764 mapA; Methionine aminopeptidase (MAP. Removes the amino-terminal methionine from nascent proteins. K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D jk1029 pepQ; putative cytoplasmic peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D jk0278 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D jk1570 htpX; putative heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D jk0083 putative membrane protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D jk1530 putative serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D jk1752 putative subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D jk0351 ptrB; Protease II (EC 3.4.21.83) (Oligopeptidase B).,Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D jk0275 pbp4; putative penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D jk0544 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D jk0545 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D jk1605 hypothetical protein K07177 K07177; Lon-like protease
D jk1106 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D jk1183 unnamed protein product; Region start changed from 1382599 to 1382581 (-18 bases) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D jk1275 putative peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
C 01003 Glycosyltransferases [BR:cjk01003]
D jk0935 ppm1; polyprenol-phosphate-mannose synthase domain 1 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D jk1519 putative membrane protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D jk1062 pimA; putative glycosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D jk0727 putative glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D jk1866 pimB; putative glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D jk1384 glgA; putative glycosyltransferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D jk1343 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D jk1505 putative membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D jk0891 putative membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D jk0734 putative membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D jk0986 putative membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D jk0085 embC; putative arabinosyl transferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D jk0086 putative membrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D jk1071 putative membrane protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D jk0166 putative membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D jk2043 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D jk0130 hypothetical protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D jk1646 putative glycosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D jk0332 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cjk01005]
D jk1343 putative UDP-N-acetylmuramyl pentapeptide phosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cjk01011]
D jk0398 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D jk1919 murB; UDP-N-acetylenolpyruvoylglucosamine reductase 2 (EC 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase 2).,Cell wall formation (By similarity). K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D jk0751 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D jk0748 murD; murD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D jk0745 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D jk1217 ddlA2; putative D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0921 ddlA1-N; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk0922 ddlA1-C; putative D-alanine-D-alanine ligase (fragment) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D jk1734 alr; Alanine racemase (EC 5.1.1.1).,Provides the D-alanine required for cell wall biosynthesis (By similarity). K01775 alr; alanine racemase [EC:5.1.1.1]
D jk0496 murI; Glutamate racemase (EC 5.1.1.3).,Provides the (R)-glutamate required for cell wall biosynthesis (By similarity). K01776 murI; glutamate racemase [EC:5.1.1.3]
D jk0747 murX; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D jk0750 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D jk0367 uppP2; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk0957 uppP1; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D jk2091 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D jk0744 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D jk0039 pbp2A; putative penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D jk0275 pbp4; putative penicillin-binding protein 4 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D jk0726 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk1678 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk0725 putative secreted protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D jk0967 putative cell wall-associated hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D jk1700 srtA; putative fimbrial associated sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D jk0103 srtB; putative sortase-like protein K07284 srtA; sortase A [EC:3.4.22.70]
D jk1036 putative secreted protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D jk2095 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cjk01004]
D jk0822 fabG2; dehydrogenase related to short-chain alcohol dehydrogenases K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D jk1059 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D jk0138 pks13; polyketide synthase K12437 pks13; polyketide synthase 13
D jk1915 fadD6; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk2042 fadD7; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0597 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0137 fadD1; acyl-CoA synthetase K12428 fadD32; fatty acid CoA ligase FadD32
D jk1546 fadD5; acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D jk0050 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D jk0729 plsC; plsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D jk1947 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cjk01008]
D jk1783 hypothetical protein K05375 mbtH; MbtH protein
D jk1814 mbtG; L-lysine 6-monooxygenase K04793 mbtG; mycobactin lysine-N-oxygenase
C 01006 Prenyltransferases [BR:cjk01006]
D jk0736 putative polyprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D jk1467 uppS1; uppS1 K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D jk0610 uppS2; uppS2 K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D jk0515 crtB; putative phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D jk1111 miaA; miaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D jk1877 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D jk0991 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D jk0132 putative membrane protein K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:cjk01007]
D jk1281 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk2018 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk0860 tyrS; Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS). K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D jk1689 trpS; Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D jk0313 cysS3; cysS3 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D jk1354 argS; Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS). K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D jk1516 metS; Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS).,Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity). K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D jk0760 ileS; Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS). K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D jk0550 valS; Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS). K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D jk2075 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D jk0294 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1200 lysX; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1041 aspS; Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS). K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D jk1045 hisS; Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS). K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D jk0613 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D jk0123 serS; Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS). K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D jk1147 proS; Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase) (ProRS). K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D jk1066 thrS; Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS). K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D jk1038 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D jk0839 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D jk0840 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D jk0175 aspC; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D jk2030 pat; phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0787 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D jk0592 aecD; cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D jk0844 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D jk1895 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D jk0710 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D jk0425 serC; serC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:cjk00199]
C 00194 Photosynthesis proteins [BR:cjk00194]
D jk1334 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D jk1335 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D jk1336 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D jk1337 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D jk1338 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D jk1339 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D jk1340 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D jk1341 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cjk03000]
D jk1858 modC; putative DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D jk1102 oxyR; putative transcriptional regulator (LysR family) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D jk0144 putative transcriptional regulator (LysR family) K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D jk1107 putative transcriptional regulator (DeoR family) K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D jk1838 putative transcriptional regulator (GntR family) K03710 K03710; GntR family transcriptional regulator
D jk0970 acnR; putative transcriptional regulator (TetR family) K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D jk0397 putative transcriptional regulator (LuxR family) K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D jk1950 putative transcriptional regulator (MarR family) K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D jk1441 putative transcriptional regulator (MerR family) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D jk0184 hspR; heat shock protein regulator HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D jk0612 furB; putative transcriptional regulator (FUR family) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D jk1972 glxR; putative transcriptional regulator (Crp family) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D jk2006 arsR; putative transcriptional regulator (ArsR family) K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D jk1437 putative transcriptional regulator (ArsR family) K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D jk1934 ramB; putative transcriptional regulator RamB K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D jk1122 clgR; putative transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D jk1097 dtxR; iron-dependent repressor DtxR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D jk1485 mntR; manganese-dependent repressor MntR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D jk1661 birA; biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D jk0454 putA; delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D jk1976 whiB4; putative transcriptional regulator (WhiB family) K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D jk1727 whiB3; putative transcriptional regulator (WhiB family) K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D jk1644 whiB2; putative transcriptional regulator (WhiB family) K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D jk1618 whiB1; putative transcriptional regulator (WhiB family) K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D jk0639 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D jk2098 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D jk0307 carD; putative transcription factor K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D jk0846 unnamed protein product; Region start changed from 1007783 to 1007771 (12 bases) K03402 argR; transcriptional regulator of arginine metabolism
D jk0600 hrcA; putative transcriptional regulator HrcA K03705 hrcA; heat-inducible transcriptional repressor
D jk1026 pyrR; putative pyrimidine operon regulatory protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D jk1105 ybaD; putative transcriptional regulator with Zn-ribbon and ATP-cone domains K07738 nrdR; transcriptional repressor NrdR
D jk0741 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cjk03021]
D jk0409 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk0413 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk1758 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D jk1846 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D jk1845 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D jk1018 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D jk1087 sigA; RNA polymerase sigma factor A K03086 rpoD; RNA polymerase primary sigma factor
D jk1094 sigB; RNA polymerase sigma factor B K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D jk1726 sigD; ECF-family sigma factor D K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D jk2092 sigM; ECF-family sigma factor M K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D jk1623 sigH; ECF-family sigma factor H K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D jk1995 sigC; ECF-family sigma factor C K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D jk1144 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D jk1027 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D jk1861 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D jk1471 greA; Transcription elongation factor greA (Transcript cleavage factor greA).,Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as greA or greB allows the resumption of elongation from the new 3terminus. GreA releases sequences of 2 to 3 nucleotides (By similarity). K03624 greA; transcription elongation factor GreA
D jk1347 rho; rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cjk03019]
D jk0556 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D jk1206 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D jk1128 conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D jk0628 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D jk0518 ornA; putative oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D jk1366 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D jk1132 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D jk1347 rho; rho K03628 rho; transcription termination factor Rho
D jk0179 dnaK; molecular chaperone protein K04043 dnaK; molecular chaperone DnaK
D jk1728 groEL1; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0267 groEL2; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk1504 pvdS1; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D jk0269 pvdS2; conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D jk2088 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D jk0900 menG; S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D jk1004 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D jk0940 putative helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D jk1104 hrpA; putative ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D jk1844 hrpB; putative ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:cjk03011]
D jk0820 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D jk1175 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D jk1827 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D jk1759 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D jk1794 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D jk2066 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D jk1841 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D jk1797 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D jk1744 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D jk1834 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D jk1760 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D jk1842 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D jk1761 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D jk1537 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D jk1135 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D jk1193 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D jk1824 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D jk1538 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D jk1829 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D jk0575 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D jk1859 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D jk1830 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D jk1833 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D jk1832 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D jk1799 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D jk1796 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D jk2064 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D jk1849 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D jk1860 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D jk1848 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D jk1745 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D jk1801 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D jk1792 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D jk1826 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D jk1757 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D jk1795 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D jk1184 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D jk0836 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D jk0557 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D jk1828 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D jk1831 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D jk1800 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D jk0558 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D jk1535 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D jk1825 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D jk1793 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D jk1534 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D jk1533 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D jk1536 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D jk2104 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D jk0835 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D jk0475 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D jk1494 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D rrfA 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfB 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfC 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrsA 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsB 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsC hypothetical_rRNA; hypothetical rRNA K01977 16SrRNA; 16S ribosomal RNA
D rrlC 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlB 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlA 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cjk03009]
D jk1206 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D jk0518 ornA; putative oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D jk0606 era; putative GTP-binding protein K03595 era; GTPase
D jk0562 obg; putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D jk1144 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D jk1027 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D jk1861 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D jk1511 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D jk1012 putative tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D jk1210 putative DNA methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D jk0602 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D jk2100 gid; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D jk0742 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D jk1518 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D jk0864 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D jk1386 rrmA; putative SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D jk0322 putative rRNA methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D jk1169 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D jk0098 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D jk1393 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D jk0877 putative pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D jk1873 rluC; pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D jk0766 rluD; pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D jk1436 erm(X); 23S rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D jk1191 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D jk0556 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D jk1037 yqgF; putative Hollyday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D jk1366 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D jk1626 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D jk0878 cmk; cytidylate kinase K03977 engA; GTPase
D jk1108 putative GTP-binding protein K03665 hflX; GTPase
D jk1344 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D jk1048 rel; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D jk1141 rbfA; Ribosome-binding factor A.,Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5terminal helix region of 16S rRNA (By similarity). K02834 rbfA; ribosome-binding factor A
D jk1145 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D jk0079 hypothetical protein K14761 rlbA; ribosome-associated protein
D jk0568 hypothetical protein K09710 ybeB; ribosome-associated protein
D jk0604 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D jk1444 ychF; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D jk1207 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cjk03016]
D jk0628 putative ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D jk1281 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk2018 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk1147 proS; Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA ligase) (ProRS). K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D jk0760 ileS; Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS). K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D jk2075 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D jk1516 metS; Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS).,Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (By similarity). K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D jk1354 argS; Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS). K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D jk0294 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1200 lysX; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D jk1041 aspS; Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS). K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D jk1038 alaS; alaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D jk0613 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D jk1066 thrS; Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS). K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D jk0123 serS; Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS). K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D jk0313 cysS3; cysS3 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D jk0550 valS; Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS). K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D jk1045 hisS; Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA ligase) (HisRS). K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D jk0839 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D jk0840 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D jk0860 tyrS; Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS). K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D jk1689 trpS; Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D jk1093 dtd; putative D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D jk0949 putative tRNA(1-methyladenosine) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D jk0149 putative tRNA (guanine-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D jk1755 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D jk1137 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D jk1321 iscS; cysteine desulfurase (iron-sulfur cofactor synthesis protein) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D jk1344 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D jk1111 miaA; miaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D jk0444 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D jk2103 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D rnpB RNaseP RNA K01978 rnpB; M1 RNA
D jk0498 rphA; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D jk1077 rnd; Ribonuclease D (EC 3.1.26.3) (RNase D).,Cleaves multimeric tRNA precursor at the spacer region (By similarity). K03684 rnd; ribonuclease D [EC:3.1.13.5]
D jk1114 miaB; miaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D jk1190 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D jk1703 cspR; putative rRNA methylase, SpoU class K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D jk0838 putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D jk0098 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D jk1393 putative pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D jk1320 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D jk0372 putative aminomethyltransferase K06980 ygfZ; tRNA-modifying protein YgfZ
D jk2020 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D jk0276 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D jk1731 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D jk1132 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cjk03012]
D jk1142 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D jk0834 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D jk1174 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D jk1839 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D jk1840 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D jk1346 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D jk1172 frr; frr K02838 frr; ribosome recycling factor
D jk1345 hemK; methylase of peptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D jk1495 pthA; Peptidyl-tRNA hydrolase 1 (EC 3.1.1.29) (PTH 1).,The natural substrate for this enzyme may be peptidyl-tRNAS which drop off the ribosome during protein synthesis (By similarity). K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D jk1496 pthB; Peptidyl-tRNA hydrolase 2 (EC 3.1.1.29) (PTH 2).,The natural substrate for this enzyme may be peptidyl-tRNAS which drop off the ribosome during protein synthesis (By similarity). K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D jk1762 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D jk1028 efp; elongation factor EF-P K02356 efp; elongation factor P
D jk0453 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D jk1498 prfC; Peptide chain release factor 3 (RF-3).,Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP but not by GMP (By similarity). K02837 prfC; peptide chain release factor 3
D jk1443 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:cjk03110]
D jk0201 clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D jk0299 clpC; ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D jk0546 clpX; ATP-dependent Clp protease, ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D jk0179 dnaK; molecular chaperone protein K04043 dnaK; molecular chaperone DnaK
D jk0487 hscA; molecular chaperone protein K04044 hscA; molecular chaperone HscA
D jk1728 groEL1; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0267 groEL2; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0183 dnaJ1; molecular chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D jk0601 dnaJ2; molecular chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D jk0180 grpE; molecular chaperone protein K03687 GRPE; molecular chaperone GrpE
D jk0776 putative ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D jk1729 groES; molecular chaperone protein K04078 groES; chaperonin GroES
D jk0278 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D jk1341 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D jk1068 putative secreted protein K09796 pccA; periplasmic copper chaperone A
D jk1752 putative subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D jk0033 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D jk1047 ppiB; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D jk2094 trxC; thioredoxin K03671 TXN; thioredoxin
D jk2056 trxA; thioredoxin K03671 TXN; thioredoxin
D jk1331 conserved hypothetical protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:cjk04131]
D jk0554 ndk; Nucleoside diphosphate kinase (EC 2.7.4.6) (NDK) (NDP kinase) (Nucleoside-2-P kinase).,Major role in the synthesis of nucleoside triphosphates other than ATP. K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D jk1001 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk0882 gapX; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk1912 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D jk0772 putative pyruvate kinase-like protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0801 pyk; Pyruvate kinase (EC 2.7.1.40) (PK). K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:cjk04121]
D jk0946 conserved hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:cjk03051]
D jk0948 putative ATPase K13527 mpa; proteasome-associated ATPase
D jk0945 hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D jk0944 hypothetical protein K13572 pafB; proteasome accessory factor B
D jk0943 conserved hypothetical protein K13573 pafC; proteasome accessory factor C
D jk0947 conserved hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:cjk03032]
D jk1858 modC; putative DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D jk0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D jk2062 dnaB; Replicative DNA helicase (EC 3.6.1.-) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D jk0630 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk0771 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk1315 dnaQ2; DNA polymerase III, epsilon subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D jk0573 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D jk1951 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D jk0723 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2003 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0693 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2012 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D jk0669 rnhA; rnhA K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D jk1182 rnhB; Ribonuclease HII (EC 3.1.26.4) (RNase HII).,This enzyme is an endonuclease that degrades the RNA of RNA-DNA hybrids specifically (By similarity). K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D jk0011 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D jk0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D jk1954 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cjk03036]
D jk1858 modC; putative DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D jk1206 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D jk0106 hypothetical protein K26249 lsr2; nucleoid-associated protein Lsr2
D jk0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D jk1202 smc; chromosome segregation protein K03529 smc; chromosome segregation protein
D jk0875 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D jk0876 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D jk0456 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D jk0744 ftsI; penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D jk1126 ftsK; cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D jk1750 putative FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D jk0752 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D jk0749 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D jk0457 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D jk0753 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D jk2095 cwlM; putative hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D jk0756 hypothetical protein K09772 sepF; cell division inhibitor SepF
D jk2099 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D jk0874 putative partitioning protein K03496 parA; chromosome partitioning protein
D AAK94057 parA; ParA K03496 parA; chromosome partitioning protein
D jk2098 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D jk2100 gid; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D jk1177 xerC; integrase/recombinase K03733 xerC; integrase/recombinase XerC
D jk0873 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D jk1377 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D jk1002 whiA; conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cjk03400]
D jk0188 ogt; 6-O-methylguanine-DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D jk1214 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D jk0054 alkA; alkA K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D jk0302 mutY; putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D jk1971 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D jk0409 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk0413 putative helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D jk1310 putative protein with NUDIX domain K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D jk0017 utp1; NUDIX protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D jk0625 utp2; NUDIX protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D jk1082 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D jk0074 tagA; DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D jk1205 mutM; Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) (Fapy-DNA glycosylase).,This enzyme may play a significant role in processes leading to recovery from mutagenesis and/or cell death by alkylating agents. Also involved in the go system responsible for removing an oxidatively damaged form of guanine (78-dihydro-8-oxoguanine = 7-OxoG) from DNA. Can also nick DNA at apurinic/apyrimidinic sites (AP sites) (By similarity). K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D jk0446 nei; putative endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D jk0259 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D jk1691 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D jk1317 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D jk0818 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D jk1304 uvrA2; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D jk0832 uvrA1; excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D jk0827 uvrB; excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D jk1005 uvrC; excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D jk1564 pcrA; putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1609 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1611 putative ATP-dependent DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1248 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D jk1846 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D jk1845 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D jk1758 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D jk1018 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D jk1490 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D jk1450 xseA; exodeoxyribonuclease large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D jk1451 xseB; exodeoxyribonuclease small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D jk0771 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk1315 dnaQ2; DNA polymerase III, epsilon subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D jk0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D jk0573 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D jk1951 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D jk0723 putative exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2003 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk0693 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D jk2012 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk1116 recA; recombinase A K03553 recA; recombination protein RecA
D jk1055 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D jk1054 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D jk1056 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D jk1015 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D jk0305 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D jk0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D jk1212 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0030 putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0129 putative DNA-binding protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D jk0609 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D jk2010 recR; recombination protein K06187 recR; recombination protein RecR
D jk0866 recN; recombination and DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N)
D jk0643 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D jk0011 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D jk0005 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D jk1954 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D jk0761 dinX; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D jk1106 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D jk1716 putative DNA polymerase involved in DNA repair K14161 imuB; protein ImuB
D jk1709 dnaE2; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D jk1115 recX; regulatory protein RecX K03565 recX; regulatory protein
D jk0491 dinG; putative ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D jk0445 lhr; putative ATP-dependent DNA helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D jk1219 putative protein with NUDIX domain K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D jk0872 putative NTP pyrophosphohydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D jk0478 nrdE; ribonucleoside-diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D jk0225 nrdF2; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D jk0480 nrdF1; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cjk03029]
D jk1142 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D jk0834 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D jk1174 tsf; elongation factor EF-Ts K02357 tsf; elongation factor Ts
D jk1839 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D jk1840 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D jk0606 era; putative GTP-binding protein K03595 era; GTPase
D jk0860 tyrS; Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA ligase) (TyrRS). K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D jk2075 leuS; leuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D jk1041 aspS; Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA ligase) (AspRS). K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D jk0613 glyS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D jk1354 argS; Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA ligase) (ArgRS). K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D jk1311 gatA; glutamyl-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D jk1306 gatB; glutamyl-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D jk2065 ssb1; ssb1 K03111 ssb; single-strand DNA-binding protein
D jk0533 ssb2; ssb2 K03111 ssb; single-strand DNA-binding protein
D jk0179 dnaK; molecular chaperone protein K04043 dnaK; molecular chaperone DnaK
D jk0180 grpE; molecular chaperone protein K03687 GRPE; molecular chaperone GrpE
D jk1728 groEL1; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0267 groEL2; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk1729 groES; molecular chaperone protein K04078 groES; chaperonin GroES
D jk0183 dnaJ1; molecular chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D jk0601 dnaJ2; molecular chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D jk1321 iscS; cysteine desulfurase (iron-sulfur cofactor synthesis protein) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D jk1377 putative ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D jk0991 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D jk0989 ctaA; cytochrome aa3 controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D jk2101 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0102 putative preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cjk02000]
D jk0437 putative ABC transport system K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D jk0438 putative ABC transport system K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D jk0591 ywjA; putative ABC transport system K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D jk1372 putative ABC transport system K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D jk0362 tetB; ABC-type transport system TetB K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D jk1782 putative ABC transport system K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D jk1509 putative ABC transport system, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D jk0361 tetA; ABC-type transport system TetA K02021 ABC.MR; putative ABC transport system ATP-binding protein
D jk1781 putative ABC transport system K02021 ABC.MR; putative ABC transport system ATP-binding protein
D jk1591 molA; putative molybdate ABC transport system, solute-binding protein K02020 modA; molybdate transport system substrate-binding protein
D jk1592 molB; putative molybdate ABC transport system, permease protein K02018 modB; molybdate transport system permease protein
D jk1593 molC; putative molybdate ABC transport system, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D jk1686 putative ABC transport system, solute-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D jk1685 putative ABC transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D jk1684 putative ABC transport system, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D jk0377 pstS; phosphate ABC transport system, solute-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D jk0378 pstC; phosphate ABC transport system, permease protein K02037 pstC; phosphate transport system permease protein
D jk0379 pstA; phosphate ABC transport system, permease protein K02038 pstA; phosphate transport system permease protein
D jk0380 pstB; phosphate ABC transport system, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D jk0655 gluB; glutamate ABC transport system, solute-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D jk0656 gluC; glutamate ABC transport system, permease protein K10006 gluC; glutamate transport system permease protein
D jk0657 gluD; glutamate ABC transport system, permease protein K10007 gluD; glutamate transport system permease protein
D jk0654 gluA; glutamate ABC transport system, ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D jk1710 putative ABC transport system, solute-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D jk1712 putative ABC transport system, permease protein K02072 metI; D-methionine transport system permease protein
D jk1711 putative ABC transport system, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D jk0253 putative extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D jk0808 putative secreted protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D jk0807 putative ABC transport system, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D jk0806 putative ABC transport system, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D jk1050 dciAE; conserved ABC-type dipeptide transport system K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D jk0316 hmuT; putative iron ABC transport system, solute-binding protein K25132 hmuT; heme transport system substrate-binding protein
D jk0317 hmuU; putative iron ABC transport system, permease protein K25133 hmuU; heme transport system permease protein
D jk0318 hmuV; putative iron ABC transport system, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D jk1812 putative iron ABC transport system, solute-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1776 putative iron ABC transport system, solute binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1809 fecS; putative iron ABC transport system, solute-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D jk1772 fhuB; putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D jk1816 fepB; putative iron ABC transport system, permease protein K23186 fepD; iron-siderophore transport system permease protein
D jk1773 fhuC; putative iron ABC transport system, permease protein K23187 fepG; iron-siderophore transport system permease protein
D jk1817 fepC; putative iron ABC transport system, permease protein K23187 fepG; iron-siderophore transport system permease protein
D jk1774 fhuA; putative iron ABC transport system, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D jk1818 fepA; putative iron ABC transport system, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D jk1887 feuS; putative iron ABC transport system, solute-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D jk1885 feuC; putative iron ABC transport system, permease protein K25283 yclO; iron-siderophore transport system permease protein
D jk1886 feuB; putative iron ABC transport system, permease protein K25284 yclN; iron-siderophore transport system permease protein
D jk1884 feuA; putative iron ABC transport system, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D jk0561 irp6A; putative iron ABC transport system, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D jk1983 feyS; putative iron ABC transport system, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D jk1296 fetS; putative iron ABC transport system, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D jk1984 feyB; putative iron ABC transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D jk0560 irp6B; putative iron ABC transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D jk1808 fecB; putative iron ABC transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D jk1807 fecC; putative iron ABC transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D jk1295 fetB; putative iron ABC transport system, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D jk1293 fetA; putative iron ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D jk1985 feyA; putative iron ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D jk0559 irp6C; putative iron ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D jk1328 putative ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D jk1806 fecA; putative iron ABC transport system, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D jk1486 mntA; manganese ABC transport system, solute-binding protein K11601 mntC; manganese transport system substrate-binding protein
D jk1488 mntC; manganese ABC transport system, permease protein K11602 mntB; manganese transport system permease protein
D jk1487 mntB; manganese ABC transport system, ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D jk1852 putative ABC transport system, permease protein K09819 ABC.MN.P; manganese/iron transport system permease protein
D jk1853 putative ABC transport system, ATP-binding protein K09820 ABC.MN.A; manganese/iron transport system ATP-binding protein
D jk1118 putative BioY family protein K03523 bioY; biotin transport system substrate-specific component
D jk1120 putative ABC transport system, permease protein K16783 bioN; biotin transport system permease protein
D jk1119 putative ABC transport system, ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D jk0235 putative ABC transport system, permease protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D jk0434 putative membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D jk0236 putative ABC transport system, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D jk0435 putative ABC transport system, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D jk0436 putative ABC transport system, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D jk0328 putative ABC transport system, solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D jk0326 putative ABC transport system, permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D jk0327 putative ABC transport system, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D jk2036 putative ABC transport system, permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D jk2037 putative ABC transport system, ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D jk1163 putative ABC transport system, permease protein K09813 hrtB; hemin transport system permease protein
D jk1421 putative ABC transport system, permease protein K09813 hrtB; hemin transport system permease protein
D jk1422 putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D jk1164 putative ABC transport system, ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D jk0457 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D jk0456 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D jk0256 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk1290 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk0889 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk0988 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk1652 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk0428 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk1650 putative ABC transport system, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D jk1289 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0089 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk1872 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0429 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0255 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0890 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0987 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk1651 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk1653 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0310 putative ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AAK94047 blsD; BlsD K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D jk0400 putative ABC transport system, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D jk0399 putative ABC transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D jk0982 sufC; ABC-type transport system involved in Fe-S cluster assembly (ATP-binding protein) K09013 sufC; Fe-S cluster assembly ATP-binding protein
D jk2083 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D jk1982 matE; multidrug and toxic compound extrusion family protein K26939 norM; MATE family, multidrug efflux pump
D jk1140 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D jk1514 putative permease of the major facilitator superfamily K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D jk1404 cmx; chloramphenicol exporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D jk1692 putative permease of the major facilitator superfamily K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D jk0097 putative permease of the major facilitator superfamily K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D jk2051 lmrB; putative permease of the major facilitator superfamily K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D jk0143 putative permease of the major facilitator superfamily K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D jk0206 putative PTS system IIabc component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D jk1610 putative membrane protein K10716 kch; voltage-gated potassium channel
D jk1197 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D jk0856 putative secreted protein K07114 yfbK; Ca-activated chloride channel homolog
D jk1316 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D jk0158 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D jk0858 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D jk1527 mscL; Large-conductance mechanosensitive channel.,Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. K03282 mscL; large conductance mechanosensitive channel
D jk1301 conserved hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D jk2015 putative magnesium and cobalt transport protein K03284 corA; magnesium transporter
D jk2058 putative membrane protein K06199 crcB; fluoride exporter
D jk2059 putative membrane protein K06199 crcB; fluoride exporter
D jk0909 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk0910 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk0605 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk1391 aroP; aromatic amino acid transport protein K16237 aroP; aromatic amino acid permease
D jk1942 gabP; gamma-aminobutyrate permease K16237 aroP; aromatic amino acid permease
D jk0185 lysI; L-lysine transport protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D jk1297 czcD; cobalt-zinc-cadmium resistance protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D jk0148 mmpL1; putative drug exporter of the RND superfamily K20470 mmpL3; trehalose monomycolate/heme transporter
D jk1741 putative membrane protein K15269 pecM; probable blue pigment (indigoidine) exporter
D jk0128 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D jk0768 rarD; putative RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D jk0463 putative membrane protein K07084 yuiF; putative amino acid transporter
D jk1186 betT2; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D jk1188 betT1; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D jk1363 putP; sodium/proline symporter family protein K11928 putP; sodium/proline symporter
D jk1314 dctA; putative Na+/H+-dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D jk0204 gltT; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D jk0347 trkH; potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D jk0348 trkA; similar to a bacterial K(+)-uptake system K03499 trkA; trk/ktr system potassium uptake protein
D jk0421 putative membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D jk0187 putative sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D jk1577 putative sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D jk0016 mntH1; manganese transport protein of NRAMP family K03322 mntH; manganese transport protein
D jk0626 mntH2; manganese transport protein of NRAMP family K03322 mntH; manganese transport protein
D jk0199 putative membrane protein K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D jk0198 putative membrane protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D jk2005 arsT; putative arsenic-transport protein K03325 ACR3; arsenite transporter
D jk1986 mnhB; pH adaptation potassium efflux system transmembrane protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D jk1987 mnhC; Na+/H+ antiporter subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D jk1988 mnhD; formate hydrogenlyase subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D jk1989 mnhE; MnhE protein K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D jk1990 mnhF; MnhF protein K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D jk1991 mnhG; Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D jk2091 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D jk1540 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D jk0078 rhtC; Threonine efflux protein.,Conducts the efflux of threonine (By similarity) K05835 rhtC; threonine efflux protein
D jk2086 azlC; branched-chain amino acid transport protein K26605 azlC; branched chain amino acid efflux pump
D jk2085 azlD; branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump
D jk0611 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D jk0689 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D jk0749 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D jk0009 putative lipoprotein involved in iron transport K07224 efeO; iron uptake system component EfeO
D jk0008 putative iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D jk1892 ccdA; cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D jk1502 pnuC; pnuC K03811 pnuC; nicotinamide mononucleotide transporter
D jk0147 putative membrane protein K20468 K20468; putative heme transporter
D jk1070 hypothetical protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:cjk02044]
D jk1034 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D jk1962 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D jk1961 putative membrane protein K12510 tadB; tight adherence protein B
D jk0757 hypothetical protein K02221 yggT; YggT family protein
D jk0571 hypothetical protein K02237 comEA; competence protein ComEA
D jk0572 putative membrane protein K02238 comEC; competence protein ComEC
D jk1752 putative subtilisin-like serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D jk1747 hypothetical protein K14956 esx; ESAT-6 family protein
D jk1748 hypothetical protein K14956 esx; ESAT-6 family protein
D jk0902 secA2; preprotein translocase SecA2 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1630 secA1; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D jk1052 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D jk1862 secE; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D jk1051 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D jk0997 secG; protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG
D jk1766 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D jk1195 srp; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D jk1198 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D jk1053 secN; preprotein translocase SecN subunit K03210 yajC; preprotein translocase subunit YajC
D jk2101 yidC; preprotein translocase YidC subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0102 putative preprotein translocase subunit K03217 yidC; YidC/Oxa1 family membrane protein insertase
D jk0942 tatA; sec-independent protein translocase protein K03116 tatA; sec-independent protein translocase protein TatA
D jk1378 tatB; sec-independent protein translocase protein K03117 tatB; sec-independent protein translocase protein TatB
D jk0941 tatC; sec-independant protein translocase protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cjk02042]
D jk0909 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk0910 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk0605 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D jk0880 putative membrane protein K11068 hlyIII; hemolysin III
D jk0010 acpA; putative acid phosphatase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:cjk02022]
D jk1911 tcsS8; two-component system sensor kinase TcsS8 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D jk1910 tcsR8; two-component system response regulator TcsR8 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D jk1272 kdpD; two-component system sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D jk1273 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D jk1531 tcsS5; two-component system sensor kinase TcsS5 K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D jk1532 tcsR5; two-component system response regulator TcsR5 K07669 mprA; two-component system, OmpR family, response regulator MprA
D jk1634 mtrB; two-component system sensor kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D jk1635 mtrA; two-component system response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D jk0342 tcsS1; two-component system sensor kinase TcsS1 K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D jk0341 tcsR1; two-component system response regulator TcsR1 K02483 K02483; two-component system, OmpR family, response regulator
D jk0888 tcsS2; two-component system sensor kinase TcsS2 K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D jk0887 tcsR2; two-component system response regulator TcsR2 K07693 desR; two-component system, NarL family, response regulator DesR
C 02035 Bacterial motility proteins [BR:cjk02035]
D jk1034 putative membrane protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D jk1962 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cjk04812]
D jk0753 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D jk2099 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D jk0874 putative partitioning protein K03496 parA; chromosome partitioning protein
D AAK94057 parA; ParA K03496 parA; chromosome partitioning protein
D jk2098 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cjk04147]
D jk1483 eno; Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase). K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D jk1001 gapA; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk0882 gapX; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D jk1000 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D jk0772 putative pyruvate kinase-like protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0801 pyk; Pyruvate kinase (EC 2.7.1.40) (PK). K00873 PK; pyruvate kinase [EC:2.7.1.40]
D jk0033 ppiA; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D jk1728 groEL1; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0267 groEL2; molecular chaperone protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D jk0179 dnaK; molecular chaperone protein K04043 dnaK; molecular chaperone DnaK
D jk0449 pgi; Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI). K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D jk1722 guaB2; putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D jk1723 guaB1; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D jk1839 tuf; elongation factor EF-Tu K02358 tuf; elongation factor Tu
D jk0113 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D jk2083 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D jk1915 fadD6; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk2042 fadD7; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk0597 fadD3; acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D jk1543 fadA3; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0160 fadA1; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk0823 fadA2; acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D jk1637 sahH; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D jk1765 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D jk1049 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D jk0848 argH; Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL). K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D jk0847 argG; Argininosuccinate synthase (EC 6.3.4.5) (Citrulline--aspartate ligase). K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D jk0291 galK; Galactokinase (EC 2.7.1.6) (Galactose kinase). K00849 galK; galactokinase [EC:2.7.1.6]
D jk1330 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D jk1671 glpK; putative glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D jk0702 glnA1; glnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk0675 glnA2; glnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D jk1899 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D jk1291 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D jk1556 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D jk1936 lpd; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D jk1324 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D jk0994 zwf; Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD). K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D jk0999 tpi; Triosephosphate isomerase (EC 5.3.1.1) (TIM). K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D jk1912 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:cjk02048]
D jk0643 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D jk0649 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D jk0648 hypothetical protein K19123 casA; CRISPR system Cascade subunit CasA
D jk0647 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D jk0646 hypothetical protein K19124 casC; CRISPR system Cascade subunit CasC
D jk0645 hypothetical protein K19125 casD; CRISPR system Cascade subunit CasD
D jk0644 hypothetical protein K19126 casE; CRISPR system Cascade subunit CasE
D jk0899 hsdR1; putative DNA restriction-modification system, restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D jk1251 hsdR2; putative DNA restriction-modification system, restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D jk0898 hsdS1; putative DNA restriction-modification system, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D jk1253 hsdS2; putative DNA restriction-modification system, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D jk0897 hsdM1; putative DNA restriction-modification system, DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D jk1254 hsdM2; putative DNA restriction-modification system, DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D jk1858 modC; putative DNA restriction-modification system, DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D jk0525 resA; putative DNA restriction-modification system, restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D jk1240 resB; putative DNA restriction-modification system, restriction enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D jk0526 modA; putative DNA restriction-modification system, DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D jk1239 modB; putative DNA restriction-modification system, DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D jk1238 mrr; mrr restriction system protein K07448 mrr; restriction system protein
D jk0894 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D jk0893 hypothetical protein K19159 yefM; antitoxin YefM
D jk1426 hypothetical protein K07334 higB-1; toxin HigB-1
D jk1425 putative plasmid maintenance system antidote-like protein K21498 higA-1; antitoxin HigA-1
D jk0753 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D jk1281 gltS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk2018 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D jk1321 iscS; cysteine desulfurase (iron-sulfur cofactor synthesis protein) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:cjk04090]
C 01504 Antimicrobial resistance genes [BR:cjk01504]
D jk1436 erm(X); 23S rRNA methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D jk1404 cmx; chloramphenicol exporter K18553 cmlR; MFS transporter, DHA1 family, chloramphenicol resistance protein
D jk0097 putative permease of the major facilitator superfamily K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D jk0411 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cjk00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cjk03100]
D tRNA0012 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA0002 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA0047 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0048 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0011 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0035 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0016 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA0019 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA0008 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA0009 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA0029 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA0034 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA0037 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA0032 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0033 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0007 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA0026 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0028 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0031 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0017 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0005 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA0015 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D tRNA0001 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA0013 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0024 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0036 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0022 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0003 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA0014 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA0006 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA0020 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0038 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0040 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA0010 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA0018 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0023 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0044 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA0049 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0046 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0050 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0045 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA0043 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0041 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0004 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA0039 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA0042 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA0021 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0030 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0027 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA0025 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D rrsA 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsB 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D rrsC hypothetical_rRNA; hypothetical rRNA K01977 16SrRNA; 16S ribosomal RNA
D rrlC 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlB 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrlA 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D rrfA 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfB 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rrfC 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D rnpB RNaseP RNA K01978 rnpB; M1 RNA
D ssrA tmRNA (10Sa RNA) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D jk0636 putative Zn-dependent alcohol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D jk2050 putative dehydrogenase related to short-chain alcohol dehydrogenases K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D jk0430 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D jk0769 putative FAD/FMN-containing dehydrogenase K05888 K05888; L-gulono-1,4-lactone dehydrogenase [EC:1.1.2.-]
D jk2049 putative FAD/FMN-containing dehydrogenase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D jk0975 putative pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D jk0075 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D jk1864 hypothetical protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D jk1153 gorA; putative glutathione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15]
D jk0154 ahpF; alkyl hydroperoxide reductase K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D jk0110 msrA; Peptide methionine sulfoxide reductase (EC 1.8.4.6) (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase).,Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D jk1072 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D jk1067 conserved hypothetical protein K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19]
D jk0503 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D jk0155 ahpC; alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D jk1993 ohrA; organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D jk1780 pvdA; putative L-ornithine N5-oxygenase K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D jk1442 merA; putative mercuric reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D jk0479 ftn; putative ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D jk0242 fpr1; putative ferredoxin/ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D jk0915 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D jk0376 putative acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D jk0936 ppm2; polyprenol-phosphate-mannose synthase domain 2 K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D jk1815 hypothetical protein K21992 mbtK; lysine N-acyltransferase [EC:2.3.1.-]
D jk0165 putative membrane protein K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D jk0419 putative glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D jk0923 hypothetical protein K17485 yvmC; cyclo(L-leucyl-L-leucyl) synthase [EC:2.3.2.22]
D jk1914 putative glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D jk0800 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D jk1213 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D jk0676 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D jk2004 arsC; putative arsenate reductase K18701 arsC; arsenate-mycothiol transferase [EC:2.8.4.2]
D jk1370 lipT2; putative type B carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D jk0325 lipT1; putative type B carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D jk0593 putative carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D jk0136 putative secreted protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D jk0535 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D jk0569 gpmB; putative phosphoglycerate mutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D jk1513 tatD; putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D jk1332 conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D jk0824 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D jk1014 defB; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D jk0261 defA; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D jk1397 conserved hypothetical protein K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D jk1469 hypothetical protein K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D jk0191 hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D jk1476 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D jk0956 cysS1; cysS1 K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D jk0368 cysS2; cysS2 K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D jk0139 accD3; acyl-CoA carboxylase, beta subunit K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-]
D jk1662 accD2; acyl-CoA carboxylase, beta subunit K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.- 2.1.3.-]
D jk1429 copB; copper-exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D jk0273 putative cation-transporting ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D jk1438 cadA; putative cadmium-transporting ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D jk0980 nifU; NifU-like protein involved in Fe-S cluster formation K04488 iscU; nitrogen fixation protein NifU and related proteins
D jk1325 etfB; electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D jk0519 putative short-chain dehydrogenase K27306 cmrA; mycolic acid reductase
C 99984 Nucleotide metabolism
D jk0226 nrdI2; NrdI protein involved in ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction
D jk0477 nrdI1; NrdI protein involved in ribonucleotide reduction K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D jk0755 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D jk0416 rpfA; resuscitation-promoting factor RpfA K21687 rpfA; resuscitation-promoting factor RpfA
D jk0051 rpfC; resuscitation-promoting factor RpfC K21687 rpfA; resuscitation-promoting factor RpfA
D jk1512 rpfB; resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB
C 99987 Cofactor metabolism
D jk0455 putative aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D jk1708 hypothetical protein K03932 lpqC; polyhydroxybutyrate depolymerase
D jk0072 putative polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D jk1282 putative polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
D jk1283 putative polyhydroxybutyrate depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase
C 99999 Others
D jk1521 putative membrane protein K15977 K15977; putative oxidoreductase
D jk1874 putative membrane protein K15977 K15977; putative oxidoreductase
D jk1305 putative membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D jk1955 cspA; putative cold shock protein K03704 cspA; cold shock protein
D jk0417 cspB; putative cold shock protein K03704 cspA; cold shock protein
D jk1185 putative transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D jk0493 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D jk0543 tig; putative trigger factor K03545 tig; trigger factor
D jk0458 smpB; smpB K03664 smpB; SsrA-binding protein
D jk0476 nrdH; glutaredoxin-like protein NrdH. K06191 nrdH; glutaredoxin-like protein NrdH
D jk1179 hypothetical protein K07391 comM; magnesium chelatase family protein
D jk1891 ccsB; membrane protein required for cytochrome c biosynthesis K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D jk1249 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D jk1180 conserved hypothetical protein K07460 yraN; putative endonuclease
D jk0950 putative RecB family exonuclease K07465 K07465; putative RecB family exonuclease
D jk1178 putative DNA processing protein K04096 smf; DNA processing protein
D jk1039 conserved hypothetical protein K07478 ycaJ; putative ATPase
D jk1581 transposase for IS1513f K07482 K07482; transposase, IS30 family
D jk1585 tnp1513f2; transposase for IS1513f K07482 K07482; transposase, IS30 family
D jk1355 tnp1513e; transposase for IS1513e K07482 K07482; transposase, IS30 family
D jk0015 tnp1513a; transposase for IS1513a K07482 K07482; transposase, IS30 family
D jk0021 tnp1513b; transposase for IS1513b K07482 K07482; transposase, IS30 family
D jk0621 tnp1513c; transposase for IS1513c K07482 K07482; transposase, IS30 family
D jk0627 tnp1513d; transposase for IS1513d K07482 K07482; transposase, IS30 family
D jk1233 tnp3520a1; transposase for IS3520 K07483 K07483; transposase
D jk0690 tnp3524a1; transposase for IS3524 K07483 K07483; transposase
D jk1804 tnp3515a1; transposase for IS3515 K07483 K07483; transposase
D jk1822 tnp3517a1; transposase for IS3517 K07483 K07483; transposase
D jk1770 tnp3504h1; transposase for IS3504h K07483 K07483; transposase
D jk1789 tnp3504i1; transposase for IS3504i K07483 K07483; transposase
D jk1713 tnp3518a1; transposase for IS3518 K07483 K07483; transposase
D jk1560 tnp3516b1; transposase for IS3516b K07483 K07483; transposase
D jk1588 tnp3504g1; transposase for IS3504g K07483 K07483; transposase
D jk0471 tnp3516d1; transposase for IS3516d K07483 K07483; transposase
D jk0387 tnp3504j1; transposase for IS3504j K07483 K07483; transposase
D jk0512 tnp3504b1; transposase for IS3504b K07483 K07483; transposase
D jk1402 tnp3513a; transposase for IS3513 K07483 K07483; transposase
D jk1245 tnp3521a1; transposase for IS3521 K07483 K07483; transposase
D jk1261 tnp3504e2; transposase for IS3504e K07483 K07483; transposase
D jk0651 transposase for IS3516c K07483 K07483; transposase
D jk0094 tnp3504a1; transposase for IS3504a K07483 K07483; transposase
D jk1133 tnp3516a1; transposase for IS3516a K07483 K07483; transposase
D jk1227 tnp3504d1; transposase for IS3504d K07483 K07483; transposase
D jk1945 tnp3506j; transposase for IS3506j K07493 K07493; putative transposase
D jk2040 tnp3506k; transposase for IS3506k K07493 K07493; putative transposase
D jk1784 tnp3525a1; transposase for IS3525 K07493 K07493; putative transposase
D jk1785 tnp3506i; transposase for IS3506i K07493 K07493; putative transposase
D jk1786 tnp3525a2; transposase for IS3525 K07493 K07493; putative transposase
D jk1787 tnp3508i; transposase for IS3508i K07493 K07493; putative transposase
D jk1579 tnp3506h; transposase for IS3506h K07493 K07493; putative transposase
D jk1586 tnp3508g; transposase for IS3508g K07493 K07493; putative transposase
D jk1601 tnp3508h; transposase for IS3508h K07493 K07493; putative transposase
D jk0337 tnp3506d; transposase for IS3506d K07493 K07493; putative transposase
D jk0389 tnp3508a; transposase for IS3508a K07493 K07493; putative transposase
D jk0509 tnp3508b; transposase for IS3508b K07493 K07493; putative transposase
D jk0460 tnp3506e; transposase for IS3506e K07493 K07493; putative transposase
D jk0531 tnp3506f; transposase for IS3506f K07493 K07493; putative transposase
D jk1259 tnp3508d; transposase for IS3508d K07493 K07493; putative transposase
D jk1262 tnp3508e; transposase for IS3508e K07493 K07493; putative transposase
D jk0062 tnp3506a; transposase for IS3506a K07493 K07493; putative transposase
D jk1278 tnp3508f; transposase for IS3508f K07493 K07493; putative transposase
D jk0153 tnp3506c; transposase for IS3506c K07493 K07493; putative transposase
D jk0633 tnp3506g; transposase for IS3506g K07493 K07493; putative transposase
D jk0092 tnp3506b; transposase for IS3506b K07493 K07493; putative transposase
D jk1230 tnp3508c; transposase for IS3508c K07493 K07493; putative transposase
D jk1803 tnp3515a2; transposase for IS3515 K07497 K07497; putative transposase
D jk1823 tnp3517a2; transposase for IS3517 K07497 K07497; putative transposase
D jk1768 tnp3504k; transposase for IS3504k K07497 K07497; putative transposase
D jk1769 tnp3504h2; transposase for IS3504h K07497 K07497; putative transposase
D jk1790 tnp3504i2; transposase for IS3504i K07497 K07497; putative transposase
D jk1714 tnp3518a2; transposase for IS3518 K07497 K07497; putative transposase
D jk1561 tnp3516b2; transposase for IS3516b K07497 K07497; putative transposase
D jk1582 tnp3504f3; transposase for IS3504f K07497 K07497; putative transposase
D jk1589 tnp3504g2; transposase for IS3504g K07497 K07497; putative transposase
D jk0472 tnp3516d2; transposase for IS3516d K07497 K07497; putative transposase
D jk0511 tnp3504b2; transposase for IS3504b K07497 K07497; putative transposase
D jk0390 tnp3504j3; transposase for IS3504j K07497 K07497; putative transposase
D jk1403 tnp3513b; transposase for IS3513 K07497 K07497; putative transposase
D jk1236 tnp3522a2; transposase for IS3522 K07497 K07497; putative transposase
D jk1244 tnp3521a2; transposase for IS3521 K07497 K07497; putative transposase
D jk1258 tnp3523a3; transposase for IS3523 K07497 K07497; putative transposase
D jk1260 tnp3504e3; transposase for IS3504e K07497 K07497; putative transposase
D jk0692 tnp3524a3; transposase for IS3524 K07497 K07497; putative transposase
D jk0697 tnp3504c3; transposase for IS3504c K07497 K07497; putative transposase
D jk0652 tnp3516c2; transposase for IS3516c K07497 K07497; putative transposase
D jk0095 tnp3504a2; transposase for IS3504a K07497 K07497; putative transposase
D jk1134 tnp3516a2; transposase for IS3516a K07497 K07497; putative transposase
D jk1228 tnp3504d2; transposase for IS3504d K07497 K07497; putative transposase
D jk1232 tnp3520a2; transposase for IS3520 K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D jk1121 conserved hypothetical protein K03969 pspA; phage shock protein A
D jk2011 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D jk1242 putative dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D jk2081 pitA; low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D jk0616 pitB; putative phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D jk0288 putative sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D jk1445 putative sodium-dependent transport system K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D jk0467 putative sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D jk1204 putative amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D jk0301 brnQ; branched-chain amino acid uptake carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D jk0582 puative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D jk0883 putative membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D jk1399 putative GTP-binding protein K06207 typA; GTP-binding protein
D jk0971 conserved hypothetical protein K07166 K07166; ACT domain-containing protein
D jk0603 putative PhoH-related protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D jk1458 phoH; putative phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D jk0084 putative lysozyme precursor K07273 acm; lysozyme
C 99994 Others
D jk0382 phoU; phosphate transport system regulator K02039 phoU; phosphate transport system protein
D jk1125 putative membrane protein K05794 terC; tellurite resistance protein TerC
D jk1474 putative oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D jk0241 hypothetical protein K02348 elaA; ElaA protein
D jk1956 putative helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D jk0538 glbO; hemoglobin-like protein K06886 glbN; hemoglobin
D jk1499 mmpL2; putative drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D jk2021 mmpL4; putative drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D jk1946 mmpL3; putative drug exporter of the RND superfamily K06994 K06994; putative drug exporter of the RND superfamily
D jk0984 sufB; ABC-type transport system involved in Fe-S cluster assembly (permease component) K09014 sufB; Fe-S cluster assembly protein SufB
D jk0983 sufD; ABC-type transport system involved in Fe-S cluster assembly (permease component) K09015 sufD; Fe-S cluster assembly protein SufD
D jk1267 putative membrane protein K07058 K07058; membrane protein
D jk1688 putative membrane protein K07058 K07058; membrane protein
D jk0937 putative membrane protein K07113 fxsA; UPF0716 protein FxsA
D jk0105 putative secreted protein K07146 K07146; UPF0176 protein
D jk0240 hypothetical protein K07146 K07146; UPF0176 protein
D jk0816 hypothetical protein K04750 phnB; PhnB protein
D jk1569 putative LemA family protein K03744 lemA; LemA protein
D jk1349 putative membrane protein K03975 dedA; membrane-associated protein
D jk1775 putative membrane protein K03975 dedA; membrane-associated protein
D jk0687 putative membrane protein K01421 yhgE; putative membrane protein
D jk0672 putative membrane protein K00389 yidH; putative membrane protein
D jk0819 putative membrane protein K08974 K08974; putative membrane protein
C 99997 Function unknown
D jk0598 hypothetical protein K06867 K06867; uncharacterized protein
D jk0392 hypothetical protein K06975 K06975; uncharacterized protein
D jk0352 conserved hypothetical protein K06986 K06986; uncharacterized protein
D jk0080 hypothetical protein K06996 K06996; uncharacterized protein
D jk1043 nucH; putative extracellular nuclease K07004 K07004; uncharacterized protein
D jk1580 putative pyridoxine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D jk0227 conserved hypothetical protein K07006 K07006; uncharacterized protein
D jk1042 conserved hypothetical protein K07054 K07054; uncharacterized protein
D jk0916 hypothetical protein K07077 K07077; uncharacterized protein
D jk0249 cysX; putative membrane protein K07090 K07090; uncharacterized protein
D jk0145 hypothetical protein K07093 K07093; uncharacterized protein
D jk1978 putative secreted protein K07098 K07098; uncharacterized protein
D jk0156 putative membrane protein K07112 K07112; uncharacterized protein
D jk1742 hypothetical protein K07118 K07118; uncharacterized protein
D jk0505 putative membrane protein K07120 K07120; uncharacterized protein
D jk0537 putative membrane protein K07120 K07120; uncharacterized protein
D jk0918 putative short-chain dehydrogenase K07124 K07124; uncharacterized protein
D jk0668 conserved hypothetical protein K07164 K07164; uncharacterized protein
D jk2102 hypothetical protein K08998 K08998; uncharacterized protein
D jk0905 hypothetical protein K08999 K08999; uncharacterized protein
D jk1481 hypothetical protein K09009 K09009; uncharacterized protein
D jk1603 putative membrane protein K09118 K09118; uncharacterized protein
D jk1401 hypothetical protein K09146 K09146; uncharacterized protein
D jk0972 conserved hypothetical protein K09157 K09157; uncharacterized protein
D jk1412 putative membrane protein K09781 K09781; uncharacterized protein
D jk0859 hypothetical protein K09791 K09791; uncharacterized protein
D jk1148 hypothetical protein K09861 K09861; uncharacterized protein
D jk1143 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024