+D GENES KO #

  KEGG Orthology (KO) - Chlamydia muridarum Nigg3

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cmx00010] D DNC_03330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_02400 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D DNC_02455 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DNC_03065 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DNC_04030 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DNC_00345 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DNC_00500 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DNC_03090 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DNC_02620 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DNC_02625 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DNC_02630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_00440 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:cmx00020] D DNC_01630 MFS transporter K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DNC_03450 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_01635 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_01055 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D DNC_01050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DNC_04475 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DNC_04470 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DNC_04480 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DNC_01230 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DNC_03320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DNC_00440 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D DNC_02620 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DNC_02625 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DNC_02630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:cmx00030] D DNC_03330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DNC_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DNC_02295 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D DNC_01680 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DNC_01975 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D DNC_00690 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D DNC_02970 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D DNC_02440 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D DNC_02455 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_02400 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D DNC_01975 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cmx00051] D DNC_02875 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_02400 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D DNC_02455 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DNC_03065 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:cmx00500] D DNC_03935 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D DNC_00925 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D DNC_01300 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DNC_02635 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D DNC_01805 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D DNC_01565 glycogen hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D DNC_03330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cmx00520] D DNC_01025 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DNC_01020 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D DNC_04675 LpxA family transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D DNC_00465 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D DNC_03745 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DNC_01100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DNC_03330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DNC_02875 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DNC_03935 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cmx00620] D DNC_02620 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DNC_02625 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DNC_02630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_03090 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DNC_02720 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DNC_01985 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DNC_01990 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DNC_02865 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DNC_03320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DNC_01230 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D DNC_00440 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cmx00630] D DNC_03320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DNC_03620 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_02810 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:cmx00640] D DNC_03135 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_02720 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DNC_01985 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DNC_01990 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DNC_02865 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DNC_01050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DNC_01055 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D DNC_04475 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DNC_04470 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DNC_04480 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D DNC_01050 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D DNC_01055 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D DNC_03065 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cmx00190] D DNC_04475 succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D DNC_04470 sdhB; succinate dehydrogenase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D DNC_04480 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit D DNC_01420 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DNC_01425 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D DNC_02945 ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D DNC_02940 ATP synthase subunit beta K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D DNC_02935 ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D DNC_02955 ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D DNC_02930 ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D DNC_02925 ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D DNC_00805 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cmx00680] D DNC_03620 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DNC_03320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D DNC_02455 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_00500 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:cmx00920] D DNC_00815 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D DNC_03635 oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cmx00061] D DNC_02720 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D DNC_01985 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D DNC_01990 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D DNC_02865 acetyl-CoA carboxyl transferase K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D DNC_02575 acyl carrier protein K02078 acpP; acyl carrier protein D DNC_02585 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DNC_02590 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DNC_00795 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DNC_02580 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DNC_04165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DNC_01890 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cmx00561] D DNC_00980 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D DNC_00995 glycerol-3-phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DNC_03735 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DNC_00820 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:cmx00564] D DNC_00460 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D DNC_00980 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D DNC_03735 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DNC_00820 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DNC_03725 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D DNC_01075 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D DNC_00380 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D DNC_00920 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DNC_03970 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D DNC_02155 phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D DNC_02160 phospholipase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cmx00230] D DNC_02475 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DNC_01640 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DNC_02210 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DNC_04000 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DNC_04550 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D DNC_02205 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DNC_01505 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D DNC_01080 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DNC_01085 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DNC_00695 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D DNC_02010 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:cmx00240] D DNC_00265 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D DNC_04000 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DNC_03180 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D DNC_02280 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D DNC_03730 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D DNC_02475 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D DNC_04240 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D DNC_01550 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D DNC_01080 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DNC_01085 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D DNC_02305 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D DNC_02860 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cmx00250] D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D DNC_01025 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:cmx00260] D DNC_03250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DNC_03255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DNC_03620 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DNC_00500 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_02810 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D DNC_01075 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] C 00270 Cysteine and methionine metabolism [PATH:cmx00270] D DNC_01640 polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D DNC_03250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DNC_03255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D DNC_03320 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:cmx00280] D DNC_00810 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D DNC_03135 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cmx00290] D DNC_00810 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:cmx00300] D DNC_03250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DNC_03255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DNC_03245 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DNC_03260 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D DNC_03610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D DNC_03400 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DNC_02740 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DNC_00725 muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cmx00310] D DNC_03450 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_01635 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:cmx00330] D DNC_03305 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D DNC_03450 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_01635 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cmx00400] D DNC_03350 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D DNC_03285 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D DNC_03290 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D DNC_03275 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D DNC_03270 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D DNC_03280 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D DNC_03340 hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cmx00450] D DNC_00315 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D DNC_01865 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D DNC_01515 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D DNC_03620 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cmx00470] D DNC_00755 UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DNC_00735 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DNC_03610 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:cmx00480] D DNC_01580 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DNC_01680 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D DNC_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:cmx00540] D DNC_04160 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DNC_04170 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DNC_02610 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DNC_03505 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DNC_03460 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DNC_03445 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D DNC_00130 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DNC_02275 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DNC_02415 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DNC_01405 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cmx00541] D DNC_02875 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D DNC_04675 LpxA family transferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cmx00550] D DNC_03745 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DNC_01100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DNC_00755 UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DNC_00735 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DNC_02740 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DNC_00725 muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DNC_03720 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DNC_00730 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DNC_00750 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DNC_02750 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DNC_04270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cmx00730] D DNC_00495 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02685 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_03085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DNC_02010 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cmx00740] D DNC_00545 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DNC_00540 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DNC_00550 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D DNC_03475 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D DNC_01835 riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D DNC_02485 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:cmx00760] D DNC_02475 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:cmx00770] D DNC_03950 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D DNC_01870 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:cmx00780] D DNC_00795 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DNC_02580 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DNC_04165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DNC_01890 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DNC_00830 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DNC_00515 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cmx00785] D DNC_04305 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D DNC_02825 biotin--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D DNC_03995 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_02620 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D DNC_02625 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D DNC_02630 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D DNC_01630 MFS transporter K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D DNC_03450 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_01635 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D DNC_03135 MFS transporter K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D DNC_02810 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cmx00790] D DNC_04595 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D DNC_04590 dihydropteroate synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D DNC_04585 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DNC_04580 gamma-glutamyl ligase K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D DNC_00545 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D DNC_03060 N-(5'-phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:cmx00670] D DNC_04585 diacylglycerol kinase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D DNC_01765 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D DNC_03620 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D DNC_04155 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DNC_00095 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cmx00860] D DNC_03695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DNC_00170 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D DNC_02425 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D DNC_00005 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DNC_02895 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D DNC_03625 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D DNC_00655 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D DNC_00650 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D DNC_00645 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D DNC_03915 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cmx00130] D DNC_02480 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D DNC_02485 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DNC_03600 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D DNC_03590 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D DNC_00780 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cmx00900] D DNC_03085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D DNC_01730 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D DNC_03780 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D DNC_00960 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D DNC_03630 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D DNC_01645 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D DNC_01255 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D DNC_02485 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D DNC_04670 diguanylate cyclase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DNC_03720 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D DNC_00690 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:cmx00261] D DNC_03250 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D DNC_03255 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D DNC_03245 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D DNC_03260 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D DNC_02585 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DNC_02580 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DNC_01890 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D DNC_02575 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D DNC_03290 3-dehydroquinate dehydratase K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D DNC_01795 4-hydroxybenzoate decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D DNC_02485 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cmx03020] D DNC_02980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DNC_02975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DNC_04040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cmx03010] D DNC_01860 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DNC_00275 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DNC_04115 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DNC_04660 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DNC_04065 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DNC_00945 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DNC_03650 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DNC_04080 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DNC_02000 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DNC_03640 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DNC_04045 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DNC_03655 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DNC_04050 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DNC_00875 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DNC_01165 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DNC_01485 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DNC_04100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DNC_00950 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DNC_04125 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DNC_04615 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DNC_03145 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DNC_02995 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DNC_04130 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DNC_04145 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DNC_04140 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DNC_04085 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DNC_04075 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DNC_02985 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DNC_00955 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DNC_02990 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DNC_03000 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DNC_01995 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DNC_04095 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DNC_04060 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DNC_04110 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DNC_04035 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DNC_04070 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DNC_01495 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DNC_01120 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DNC_03555 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DNC_04120 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DNC_04135 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DNC_04090 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DNC_00935 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D DNC_03550 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DNC_01800 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DNC_04105 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DNC_01465 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DNC_02135 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DNC_01115 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DNC_00870 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DNC_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DNC_00680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DNC_00610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DNC_00685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cmx00970] D DNC_00025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DNC_02265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DNC_00135 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_03820 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_04535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_01540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DNC_02495 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DNC_00720 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DNC_00930 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DNC_00255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DNC_00280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DNC_00425 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DNC_00590 tRNA-His K14226 tRNA-His; tRNA His D DNC_02260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DNC_01280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_03800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_04020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_04200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_03840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_00250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DNC_02410 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_03050 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_02405 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_03560 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DNC_01660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DNC_04690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DNC_01130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_00235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_02080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_03025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_03015 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DNC_02085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DNC_01090 tRNA-Val K14237 tRNA-Val; tRNA Val D DNC_02500 tRNA-Val K14237 tRNA-Val; tRNA Val D DNC_03695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DNC_01370 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DNC_01375 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DNC_01365 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DNC_00665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DNC_04220 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DNC_00915 glycyl-tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D DNC_04420 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DNC_00535 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DNC_00855 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DNC_01515 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DNC_04155 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D DNC_02915 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DNC_02420 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DNC_01450 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DNC_00850 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DNC_03740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DNC_03415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DNC_04225 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DNC_01125 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DNC_03865 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DNC_01675 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DNC_04440 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cmx03060] D DNC_04055 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DNC_03010 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DNC_03195 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DNC_03710 preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D DNC_00625 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DNC_02650 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DNC_00390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DNC_01480 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DNC_01045 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DNC_01455 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D DNC_03490 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cmx04122] D DNC_00495 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02685 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02835 tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:cmx03018] D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DNC_01160 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DNC_03435 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DNC_03945 transcription termination factor Rho K03628 rho; transcription termination factor Rho D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_03430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DNC_01920 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DNC_00405 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DNC_03500 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cmx03030] D DNC_02700 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04185 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04235 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DNC_02300 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_03100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_01590 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DNC_01750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DNC_03985 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DNC_00900 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_01500 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DNC_01395 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cmx03410] D DNC_00365 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DNC_04560 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DNC_01905 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DNC_04655 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DNC_03705 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cmx03420] D DNC_00660 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DNC_03095 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DNC_04445 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DNC_00890 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DNC_04565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cmx03430] D DNC_00895 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DNC_04390 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D DNC_04565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DNC_03070 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DNC_03075 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNC_03705 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_04235 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DNC_01750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DNC_02300 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_03100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_01590 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DNC_02700 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04185 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cmx03440] D DNC_03705 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_01745 recombinase RecF K03629 recF; DNA replication and repair protein RecF D DNC_03830 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DNC_02595 recombinase RecR K06187 recR; recombination protein RecR D DNC_00100 recombinase RecA K03553 recA; recombination protein RecA D DNC_04005 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DNC_01555 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DNC_04010 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DNC_00040 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DNC_00045 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DNC_00110 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DNC_01520 ATPase AAA K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DNC_04235 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DNC_01750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DNC_02300 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_03100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_01590 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DNC_02700 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04185 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_00835 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D DNC_00975 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cmx02010] D DNC_03345 ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D DNC_02015 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D DNC_02020 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D DNC_02355 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DNC_02360 peptide permease K15581 oppB; oligopeptide transport system permease protein D DNC_02365 peptide permease K15582 oppC; oligopeptide transport system permease protein D DNC_02375 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DNC_02370 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D DNC_03530 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D DNC_03540 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D DNC_03535 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DNC_01710 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D DNC_01720 iron ABC transporter K11708 troC; manganese/zinc/iron transport system permease protein D DNC_01725 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein D DNC_01715 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D DNC_03235 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D DNC_02140 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D DNC_02145 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DNC_01145 permease K07091 lptF; lipopolysaccharide export system permease protein D DNC_01140 permease K11720 lptG; lipopolysaccharide export system permease protein D DNC_00120 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:cmx02060] D DNC_03110 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DNC_03115 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DNC_02850 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DNC_02855 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cmx03070] D DNC_00230 secretin K03219 yscC; type III secretion protein C D DNC_01815 copN protein K04058 yscW; type III secretion protein W D DNC_04310 preproteins translocase J K03222 yscJ; type III secretion protein J D DNC_04325 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D DNC_04330 preprotein translocase S K03227 yscS; type III secretion protein S D DNC_04335 preprotein translocase T K03228 yscT; type III secretion protein T D DNC_01825 type III secretion system protein K03229 yscU; type III secretion protein U D DNC_01820 Low calcium response locus protein D K03230 yscV; type III secretion protein V D DNC_00205 fliI; ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D DNC_04320 type III secretion system protein K03223 yscL; type III secretion protein L D DNC_04375 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D DNC_04365 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D DNC_04370 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DNC_03710 preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D DNC_03010 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DNC_03195 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DNC_04055 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DNC_00625 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DNC_02650 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DNC_00390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DNC_01045 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DNC_01480 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:cmx02020] D DNC_01060 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D DNC_01670 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D DNC_02645 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_02775 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_04230 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D DNC_03810 histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D DNC_03815 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K07714 atoC; two-component system, NtrC family, response regulator AtoC D DNC_04570 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DNC_01420 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D DNC_01425 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cmx02024] D DNC_02460 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter D DNC_00540 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D DNC_02355 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DNC_02360 peptide permease K15581 oppB; oligopeptide transport system permease protein D DNC_02365 peptide permease K15582 oppC; oligopeptide transport system permease protein D DNC_02375 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DNC_02370 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D DNC_02065 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_02225 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_03890 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_03885 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DNC_03880 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DNC_00330 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DNC_00325 LuxR family transcriptional regulator K02032 ddpF; peptide/nickel transport system ATP-binding protein D DNC_02650 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D DNC_03710 preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D DNC_03010 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DNC_03195 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DNC_04055 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DNC_00625 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DNC_00390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DNC_01045 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DNC_01480 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D DNC_00220 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:cmx02040] D DNC_00485 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D DNC_00480 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D DNC_00475 type III secretion protein ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DNC_00220 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D DNC_01665 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D DNC_04600 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D DNC_04570 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DNC_01670 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cmx01501] D DNC_02355 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DNC_02360 peptide permease K15581 oppB; oligopeptide transport system permease protein D DNC_02365 peptide permease K15582 oppC; oligopeptide transport system permease protein D DNC_02375 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DNC_02370 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D DNC_02750 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cmx01502] D DNC_00755 UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DNC_00725 muramoyl-DAP ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D DNC_00730 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DNC_00750 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cmx01503] D DNC_02735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DNC_01060 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D DNC_04160 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cmx01000] C 01001 Protein kinases [BR:cmx01001] D DNC_02910 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D DNC_04260 histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DNC_03810 histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cmx01009] D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_02690 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:cmx01002] D DNC_03490 peptidase A8 K03101 lspA; signal peptidase II [EC:3.4.23.36] D DNC_02205 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D DNC_01025 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D DNC_02665 membrane protein K07052 K07052; CAAX protease family protein D DNC_01930 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D DNC_00975 peptidase M16 K01408 IDE; insulysin [EC:3.4.24.56] D DNC_01065 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D DNC_01580 aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D DNC_01210 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D DNC_04385 aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D DNC_01155 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DNC_01735 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D DNC_01060 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D DNC_04270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DNC_00415 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DNC_03615 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D DNC_03155 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D DNC_01455 signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D DNC_03665 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:cmx01003] D DNC_00925 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cmx01005] D DNC_04160 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D DNC_03505 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D DNC_04170 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D DNC_02610 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D DNC_03460 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D DNC_01405 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D DNC_02415 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D DNC_00130 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D DNC_02275 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D DNC_03445 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cmx01011] D DNC_03745 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D DNC_01100 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D DNC_00755 UDP-N-acetylmuramate--alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D DNC_00735 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D DNC_02740 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D DNC_00730 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D DNC_00750 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D DNC_04650 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D DNC_02750 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DNC_04270 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D DNC_02735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cmx01004] D DNC_02585 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D DNC_02590 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D DNC_00795 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D DNC_02580 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D DNC_04165 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D DNC_01890 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D DNC_00980 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D DNC_00995 glycerol-3-phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D DNC_03735 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D DNC_00820 acyl-phosphate glycerol 3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cmx01006] D DNC_04670 diguanylate cyclase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D DNC_03720 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D DNC_00775 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DNC_02480 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:cmx01007] D DNC_03695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DNC_01675 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DNC_04440 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DNC_00855 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DNC_03740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DNC_01515 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DNC_01450 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DNC_02915 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DNC_02420 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DNC_00850 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DNC_04220 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DNC_04225 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DNC_00535 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DNC_03415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DNC_04420 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DNC_00665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DNC_01125 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DNC_03865 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DNC_00030 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D DNC_03400 aspartate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D DNC_00830 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D DNC_02425 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cmx03000] D DNC_00515 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D DNC_00320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DNC_03420 HrcA family transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor D DNC_02430 hypothetical protein K07735 algH; putative transcriptional regulator D DNC_03485 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D DNC_03480 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:cmx03021] D DNC_04040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DNC_02980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DNC_02975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DNC_04600 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D DNC_04570 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor D DNC_01670 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D DNC_01855 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DNC_01105 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D DNC_03005 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D DNC_04455 regulatory protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D DNC_03580 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D DNC_00770 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist D DNC_04260 histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D DNC_03485 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D DNC_03945 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cmx03019] D DNC_00985 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D DNC_02885 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DNC_03435 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DNC_01160 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D DNC_03945 transcription termination factor Rho K03628 rho; transcription termination factor Rho D DNC_02390 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D DNC_03430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DNC_01920 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DNC_00405 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D DNC_03500 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:cmx03011] D DNC_01860 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D DNC_00275 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D DNC_04115 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D DNC_04660 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D DNC_04065 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D DNC_00945 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D DNC_03650 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D DNC_04080 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D DNC_02000 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D DNC_03640 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D DNC_04045 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D DNC_03655 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D DNC_04050 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D DNC_00875 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D DNC_01165 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D DNC_01485 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D DNC_04100 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D DNC_00950 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D DNC_04125 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D DNC_04615 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D DNC_03145 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D DNC_02995 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D DNC_04130 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D DNC_04145 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D DNC_04140 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D DNC_04085 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D DNC_04075 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D DNC_00955 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D DNC_02990 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D DNC_03000 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D DNC_02985 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D DNC_01995 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D DNC_04095 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D DNC_04060 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D DNC_04110 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D DNC_04035 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D DNC_04070 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D DNC_01495 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D DNC_01120 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D DNC_03555 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D DNC_04120 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D DNC_04135 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D DNC_04090 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D DNC_03550 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D DNC_01800 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D DNC_04105 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D DNC_01465 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D DNC_02135 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D DNC_01115 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D DNC_00870 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D DNC_00935 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D DNC_00610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DNC_00685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DNC_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DNC_00680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cmx03009] D DNC_02885 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DNC_03545 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D DNC_03485 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D DNC_01855 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D DNC_01105 antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D DNC_03005 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D DNC_03205 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D DNC_03925 methylase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D DNC_02760 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D DNC_01595 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D DNC_03470 DNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D DNC_00505 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D DNC_01900 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D DNC_00150 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D DNC_00985 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D DNC_02285 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D DNC_00400 GTP-binding protein Der K03977 engA; GTPase D DNC_03335 GTPase HflX K03665 hflX; GTPase D DNC_02055 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DNC_01845 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D DNC_00790 oligomerization domain protein K09710 ybeB; ribosome-associated protein D DNC_03570 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor D DNC_01830 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase D DNC_00990 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cmx03016] D DNC_03165 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D DNC_03695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DNC_03415 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D DNC_01450 isoleucyl-tRNA synthase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D DNC_02420 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DNC_01515 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D DNC_03740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DNC_00850 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D DNC_04220 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DNC_00665 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D DNC_04420 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D DNC_00535 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D DNC_00855 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D DNC_02915 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D DNC_04225 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D DNC_01125 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D DNC_03865 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D DNC_01675 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DNC_04440 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D DNC_03370 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DNC_03785 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D DNC_01840 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D DNC_00495 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02685 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02055 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D DNC_00775 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D DNC_00370 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D DNC_03990 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DNC_00815 3'-5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D DNC_00865 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D DNC_04700 bacterial RNase P K01978 rnpB; M1 RNA D DNC_00915 glycyl-tRNA ligase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D DNC_01170 cytidine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D DNC_00070 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D DNC_01490 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D DNC_04210 tRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D DNC_03465 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D DNC_02835 tRNA 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D DNC_02330 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D DNC_01150 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D DNC_02350 protein kinase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D DNC_04190 ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D DNC_03435 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D DNC_01160 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cmx03012] D DNC_01850 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DNC_01110 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DNC_00270 elongation factor Ts K02357 tsf; elongation factor Ts D DNC_03020 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DNC_03645 elongation factor G K02355 fusA; elongation factor G D DNC_01470 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D DNC_00260 ribosome recycling factor K02838 frr; ribosome recycling factor D DNC_01475 SAM-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D DNC_00940 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D DNC_03030 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D DNC_00700 elongation factor P K02356 efp; elongation factor P D DNC_01980 elongation factor P K02356 efp; elongation factor P D DNC_03765 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:cmx03110] D DNC_01935 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D DNC_02830 NDP-hexose 4-ketoreductase K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D DNC_00410 Clp protease ATP-binding protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D DNC_03430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DNC_01920 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DNC_03140 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D DNC_03425 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D DNC_01925 molecular chaperone GroES K04078 groES; chaperonin GroES D DNC_01060 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D DNC_01155 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D DNC_04205 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:cmx04131] D DNC_04000 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D DNC_04030 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DNC_00500 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D DNC_03090 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:cmx03032] D DNC_02645 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_02775 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_03985 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D DNC_00900 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_04235 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DNC_01750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DNC_01590 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DNC_02700 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04185 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_02300 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_03100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_01500 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D DNC_01395 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNC_00160 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DNC_02310 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DNC_00165 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DNC_02315 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DNC_00065 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cmx03036] D DNC_02885 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D DNC_02645 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_02775 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D DNC_02750 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D DNC_00585 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D DNC_00745 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DNC_02735 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D DNC_00435 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DNC_00520 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D DNC_04425 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D DNC_00320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D DNC_03990 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D DNC_03170 recombinase XerC K03733 xerC; integrase/recombinase XerC D DNC_01290 recombinase XerD K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:cmx03400] D DNC_03875 DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D DNC_04560 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D DNC_01905 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D DNC_00365 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D DNC_02860 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D DNC_04655 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D DNC_03705 single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNC_02110 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNC_03095 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D DNC_04445 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D DNC_00890 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D DNC_04565 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D DNC_02980 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D DNC_02975 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D DNC_04040 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D DNC_00660 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D DNC_00895 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D DNC_04390 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D DNC_03070 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D DNC_03075 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNC_04235 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D DNC_01750 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D DNC_01590 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D DNC_02700 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_04185 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D DNC_02300 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_03100 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_00040 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D DNC_00045 exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D DNC_00110 exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DNC_01520 ATPase AAA K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D DNC_00100 recombinase RecA K03553 recA; recombination protein RecA D DNC_04005 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D DNC_01555 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D DNC_04010 Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D DNC_00835 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D DNC_02890 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D DNC_01745 recombinase RecF K03629 recF; DNA replication and repair protein RecF D DNC_03830 DNA recombination protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D DNC_02595 recombinase RecR K06187 recR; recombination protein RecR D DNC_00160 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DNC_02310 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D DNC_00165 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DNC_02315 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D DNC_00065 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D DNC_02470 helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D DNC_01080 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D DNC_01085 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cmx03029] D DNC_01850 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D DNC_01110 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D DNC_00270 elongation factor Ts K02357 tsf; elongation factor Ts D DNC_03020 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DNC_03645 elongation factor G K02355 fusA; elongation factor G D DNC_01675 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D DNC_02420 leucyl-tRNA synthase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D DNC_04220 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D DNC_03740 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D DNC_01370 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D DNC_01375 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D DNC_01365 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D DNC_01575 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D DNC_02600 membrane protein K07277 SAM50; outer membrane protein insertion porin family D DNC_03430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DNC_03425 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D DNC_01920 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DNC_01925 molecular chaperone GroES K04078 groES; chaperonin GroES D DNC_03140 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D DNC_00495 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02685 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02650 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cmx02000] D DNC_01225 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D DNC_02255 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D DNC_03345 ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D DNC_02015 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein D DNC_02020 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D DNC_03920 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D DNC_02355 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D DNC_02360 peptide permease K15581 oppB; oligopeptide transport system permease protein D DNC_02365 peptide permease K15582 oppC; oligopeptide transport system permease protein D DNC_02375 peptide ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D DNC_02370 peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D DNC_02065 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_02225 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_03890 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D DNC_03885 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D DNC_03880 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D DNC_00330 ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D DNC_00325 LuxR family transcriptional regulator K02032 ddpF; peptide/nickel transport system ATP-binding protein D DNC_03530 metal ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D DNC_03540 metal ABC transporter permease K09816 znuB; zinc transport system permease protein D DNC_03535 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D DNC_01710 hypothetical protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D DNC_01720 iron ABC transporter K11708 troC; manganese/zinc/iron transport system permease protein D DNC_01725 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein D DNC_01715 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D DNC_03235 biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D DNC_01145 permease K07091 lptF; lipopolysaccharide export system permease protein D DNC_01140 permease K11720 lptG; lipopolysaccharide export system permease protein D DNC_00120 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D DNC_02140 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D DNC_02145 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D DNC_00305 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D DNC_04230 MFS transporter K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D DNC_03110 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D DNC_03115 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D DNC_02850 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DNC_02855 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D DNC_02335 magnesium transporter K06213 mgtE; magnesium transporter D DNC_04500 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D DNC_04495 biopolymer transporter ExbB K03562 tolQ; biopolymer transport protein TolQ D DNC_02675 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DNC_03575 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DNC_02680 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DNC_00285 porin K03162 ompA; major outer membrane protein D DNC_00455 membrane protein K08719 K08719; outer membrane protein B D DNC_02600 membrane protein K07277 SAM50; outer membrane protein insertion porin family D DNC_03310 arginine:agmatine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D DNC_02460 amino acid:proton antiporter K20265 gadC; glutamate:GABA antiporter D DNC_01030 amino acid transporter K03834 tyrP; tyrosine-specific transport protein D DNC_01035 amino acid transporter K03834 tyrP; tyrosine-specific transport protein D DNC_01235 sulfate permease K03321 TC.SULP; sulfate permease, SulP family D DNC_04650 membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D DNC_02070 integral membrane family protein K09125 yhhQ; queuosine precursor transporter D DNC_00745 cell division protein FtsW K03588 ftsW; cell division protein FtsW D DNC_04515 membrane protein K03640 pal; peptidoglycan-associated lipoprotein D DNC_04510 tolB; translocation protein TolB K03641 tolB; TolB protein C 02044 Secretion system [BR:cmx02044] D DNC_04375 general secretion pathway protein GspD K02453 gspD; general secretion pathway protein D D DNC_04370 general secretion pathway protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D DNC_04365 general secretion pathway protein GspF K02455 gspF; general secretion pathway protein F D DNC_00075 membrane protein K02221 yggT; YggT family protein D DNC_00230 secretin K03219 yscC; type III secretion protein C D DNC_04310 preproteins translocase J K03222 yscJ; type III secretion protein J D DNC_04320 type III secretion system protein K03223 yscL; type III secretion protein L D DNC_00205 fliI; ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D DNC_04325 ssaR; type III secretion system protein SsaR K03226 yscR; type III secretion protein R D DNC_04330 preprotein translocase S K03227 yscS; type III secretion protein S D DNC_04335 preprotein translocase T K03228 yscT; type III secretion protein T D DNC_01825 type III secretion system protein K03229 yscU; type III secretion protein U D DNC_01820 Low calcium response locus protein D K03230 yscV; type III secretion protein V D DNC_01815 copN protein K04058 yscW; type III secretion protein W D DNC_01665 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D DNC_00485 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D DNC_00480 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D DNC_00475 type III secretion protein ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DNC_00220 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D DNC_00390 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D DNC_03710 preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D DNC_03010 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D DNC_03195 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D DNC_04055 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D DNC_01480 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D DNC_01045 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D DNC_00625 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D DNC_02650 protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:cmx02042] D DNC_02675 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DNC_03575 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D DNC_02680 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:cmx02022] D DNC_03810 histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D DNC_03815 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:cmx02035] D DNC_00480 flagellar biosynthesis protein K02411 fliH; flagellar assembly protein FliH D DNC_00475 type III secretion protein ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D DNC_01665 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D DNC_00220 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D DNC_00485 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D DNC_01670 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cmx04812] D DNC_00435 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DNC_04425 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D DNC_00320 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cmx04147] D DNC_04450 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D DNC_04030 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D DNC_00345 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D DNC_03090 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D DNC_04530 thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D DNC_01920 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D DNC_03430 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D DNC_03330 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D DNC_02210 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D DNC_03020 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D DNC_03370 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D DNC_02010 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D DNC_01300 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D DNC_00005 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D DNC_04300 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D DNC_02290 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D DNC_03065 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D DNC_00500 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cmx02048] D DNC_00435 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D DNC_03695 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D DNC_00495 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D DNC_02685 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cmx03100] D DNC_00025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DNC_02265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D DNC_00135 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_03820 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_04535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D DNC_01540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D DNC_02495 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D DNC_00720 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D DNC_00930 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D DNC_00255 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D DNC_00280 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DNC_00425 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D DNC_00590 tRNA-His K14226 tRNA-His; tRNA His D DNC_02260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D DNC_01280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_03800 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_04020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_04200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_03840 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D DNC_00250 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D DNC_02410 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_03050 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_02405 tRNA-Met K14230 tRNA-Met; tRNA Met D DNC_03560 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D DNC_01660 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DNC_04690 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D DNC_01130 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03525 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_03975 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D DNC_00235 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_02080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_03025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D DNC_03015 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D DNC_02085 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D DNC_01090 tRNA-Val K14237 tRNA-Val; tRNA Val D DNC_02500 tRNA-Val K14237 tRNA-Val; tRNA Val D DNC_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00675 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D DNC_00605 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DNC_00680 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D DNC_00610 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DNC_00685 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D DNC_04700 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D DNC_04575 dehydrogenase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D DNC_00845 disulfide bond formation protein DsbH K01829 dsbH; disulfide reductase [EC:1.8.-.-] D DNC_04175 acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D DNC_02655 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D DNC_01760 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D DNC_01415 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D DNC_00240 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D DNC_04485 phosphoesterase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D DNC_03200 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D DNC_00010 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D DNC_02790 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D DNC_02795 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D DNC_02800 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D DNC_02805 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D DNC_00620 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D DNC_00525 HAD family hydrolase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D DNC_00490 nitrogen fixation protein NifU K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D DNC_02050 hydrolase K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D DNC_00245 excinuclease ABC subunit B K19411 mcsA; protein arginine kinase activator D DNC_00420 trigger factor K03545 tig; trigger factor D DNC_01755 SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D DNC_01070 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D DNC_03325 transcriptional regulator K08274 ltuA; late transcription unit A protein D DNC_01775 Late transcription unit B protein K08275 ltuB; late transcription unit B protein D DNC_03105 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D DNC_01690 ATPase AAA K03301 TC.AAA; ATP:ADP antiporter, AAA family D DNC_03965 ATPase AAA K03301 TC.AAA; ATP:ADP antiporter, AAA family D DNC_00340 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D DNC_02550 Na-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D DNC_03455 sodium:dicarboxylate symporter K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D DNC_00565 cytochrome C551 K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D DNC_03495 cytochrome C550 K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D DNC_04285 branched-chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D DNC_02385 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D DNC_01430 ATPase K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D DNC_02605 Skp K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D DNC_00310 ABC transporter permease K09015 sufD; Fe-S cluster assembly protein SufD D DNC_02030 ribonuclease BN K07058 K07058; membrane protein D DNC_03595 menaquinone biosynthesis family protein K07081 K07081; putative periplasmic solute-binding protein D DNC_02705 menaquinone biosynthesis family protein K07083 K07083; putative periplasmic solute-binding protein D DNC_04665 hypothetical protein K07146 K07146; UPF0176 protein C 99997 Function unknown D DNC_03215 thioredoxin K06888 K06888; uncharacterized protein D DNC_02125 hydrolase K06889 K06889; uncharacterized protein D DNC_02395 acyltransferase K06889 K06889; uncharacterized protein D DNC_01040 hypothetical protein K06890 K06890; uncharacterized protein D DNC_00155 hypothetical protein K06960 K06960; uncharacterized protein D DNC_00760 RNA-binding protein K06960 K06960; uncharacterized protein D DNC_02075 SEC-C motif family protein K07039 K07039; uncharacterized protein D DNC_03775 metallophosphoesterase K07098 K07098; uncharacterized protein D DNC_03930 phoshohydrolase K07099 K07099; uncharacterized protein D DNC_00575 lysine methyltransferase K07117 K07117; uncharacterized protein D DNC_03040 Fe-S metabolism protein SufE K07125 K07125; uncharacterized protein D DNC_03440 zinc ribbon domain protein K07164 K07164; uncharacterized protein D DNC_03855 hypothetical protein K08998 K08998; uncharacterized protein D DNC_02435 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D DNC_03390 hypothetical protein K09131 K09131; uncharacterized protein D DNC_01360 membrane protein K09779 K09779; uncharacterized protein D DNC_00335 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 20, 2024