+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Escherichia coli SMS-3-5 (environmental)

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins D EcSMS35_4319 DNA-cytosine methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D EcSMS35_1224 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E EcSMS35_2720 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D EcSMS35_1904 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D EcSMS35_4786 H-NS histone family protein K03746 hns; DNA-binding protein H-NS D EcSMS35_2789 stpA; H-NS histone family protein StpA K11685 stpA; DNA-binding protein StpA C HU (heat unstable protein) D EcSMS35_4448 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D EcSMS35_0483 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D EcSMS35_1478 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D EcSMS35_2208 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D EcSMS35_2124 cbpA; curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D EcSMS35_2125 cbpM; chaperone-modulator protein CbpM K18997 cbpM; chaperone modulatory protein CbpM D EcSMS35_4946 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D EcSMS35_4067 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D EcSMS35_3444 diaA; DnaA initiator-associating protein DiaA K12961 diaA; DnaA initiator-associating protein D EcSMS35_2152 hemimethylated DNA-binding protein K11940 hspQ; heat shock protein HspQ D EcSMS35_0836 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D EcSMS35_3556 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D EcSMS35_4643 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein D EcSMS35_3052 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D EcSMS35_2231 lrp; leucine responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D EcSMS35_2335 ndpA; nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D EcSMS35_2196 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D EcSMS35_2197 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE D EcSMS35_2198 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D EcSMS35_0099 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA D EcSMS35_2873 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB D EcSMS35_3746 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D EcSMS35_0089 ftsI; peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D EcSMS35_2230 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D EcSMS35_0088 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D EcSMS35_4375 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN D EcSMS35_0098 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D EcSMS35_0094 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW D EcSMS35_3745 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D EcSMS35_0100 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D EcSMS35_2567 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA D EcSMS35_3044 conserved hypothetical protein K09888 zapA; cell division protein ZapA D EcSMS35_4368 conserved hypothetical protein K09892 zapB; cell division protein ZapB D EcSMS35_2172 conserved hypothetical protein K18657 zapC; cell division protein ZapC D EcSMS35_0106 conserved hypothetical protein K18778 zapD; cell division protein ZapD D EcSMS35_3528 ATPase, AFG1 family K06916 zapE; cell division protein ZapE D EcSMS35_4683 opacity-associated family protein K07269 ytfB; cell division protein YtfB D EcSMS35_2590 amiA; N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EcSMS35_3140 amiC2; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EcSMS35_4640 amiB; N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EcSMS35_2964 amiC1; N-acetylmuramoyl-L-alanine amidase AmiC K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D EcSMS35_1836 eefA; multidrug efflux transport protein EefA K03585 acrA; membrane fusion protein, multidrug efflux system D EcSMS35_0506 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D EcSMS35_1973 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D EcSMS35_1974 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D EcSMS35_1975 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D EcSMS35_2162 sulA; cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA D EcSMS35_3976 transcriptional regulator domain protein, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D EcSMS35_0709 seqA; protein SeqA K03645 seqA; negative modulator of initiation of replication D EcSMS35_3546 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D EcSMS35_3545 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D EcSMS35_3544 lytS; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D EcSMS35_0654 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D EcSMS35_A0073 sopA; plasmid partition protein SopA K03496 parA; chromosome partitioning protein D EcSMS35_A0054 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EcSMS35_A0072 sopB; plasmid partition protein SopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D EcSMS35_3310 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D EcSMS35_3325 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D EcSMS35_4109 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D EcSMS35_4108 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D EcSMS35_4177 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D EcSMS35_3027 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D EcSMS35_0930 mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D EcSMS35_3643 fic; cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D EcSMS35_4248 putative GTP-binding protein EngB K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024