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Transfer RNA Biogenesis - Eucalyptus grandis (rose gum)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 104450307 uncharacterized protein LOC104450307 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 104440775 LOW QUALITY PROTEIN: ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 104424578 LOW QUALITY PROTEIN: probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 104430757 probable ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 104448470 uncharacterized protein LOC104448470 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 104436738 proteinaceous RNase P 1, chloroplastic/mitochondrial K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 104456002 LOW QUALITY PROTEIN: proteinaceous RNase P 1, chloroplastic/mitochondrial K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
D 104421291 proteinaceous RNase P 2 isoform X1 K18213 PRORP; proteinaceous RNase P [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 104425963 LOW QUALITY PROTEIN: tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104423087 tRNAse Z TRZ4, mitochondrial K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104424699 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104456460 ribonuclease 2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453944 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453945 ribonuclease 1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453946 ribonuclease 1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 120285934 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104437422 pentatricopeptide repeat-containing protein At2g18940, chloroplastic K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 104437755 pentatricopeptide repeat-containing protein At5g25630 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
D 104438268 pentatricopeptide repeat-containing protein At5g25630 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 104421824 tRNA-splicing endonuclease subunit Sen2-1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 104444792 tRNA-splicing endonuclease subunit Sen54 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
D 104433079 tRNA-splicing endonuclease subunit Sen54 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
C Other tRNA splicing factors
D 104442248 tRNA 2'-phosphotransferase 1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
D 9829622 matK; maturase K K20000 MATK; maturase K
B tRNA transport factors
C tRNA export factors
D 104438497 GTP-binding nuclear protein Ran1A isoform X1 K07936 RAN; GTP-binding nuclear protein Ran
D 104436643 LOW QUALITY PROTEIN: GTP-binding nuclear protein Ran-3 K07936 RAN; GTP-binding nuclear protein Ran
D 104444262 GTP-binding nuclear protein Ran1A-like K07936 RAN; GTP-binding nuclear protein Ran
D 104431007 GTP-binding nuclear protein Ran-3-like K07936 RAN; GTP-binding nuclear protein Ran
D 120291236 GTP-binding nuclear protein Ran1A-like K07936 RAN; GTP-binding nuclear protein Ran
D 104439167 GTP-binding nuclear protein Ran1A K07936 RAN; GTP-binding nuclear protein Ran
D 104450983 exportin-T K14288 XPOT; exportin-T
D 104450369 protein EXPORTIN 1A K14290 XPO1; exportin-1
D 104415492 protein HASTY 1 isoform X1 K14289 XPO5; exportin-5
D 104432850 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 104454193 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 104421815 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
D 104421810 elongation factor 1-alpha isoform X1 K03231 EEF1A; elongation factor 1-alpha
D 104421812 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
D 104420980 probable inactive serine/threonine-protein kinase scy1 isoform X1 K08876 SCYL1; SCY1-like protein 1
C tRNA import factors
D 104418723 transportin MOS14 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 104415925 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 104456909 glutamate--tRNA ligase, cytoplasmic isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 120295728 glutamate--tRNA ligase, chloroplastic/mitochondrial-like K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 104448437 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 104421463 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 104424617 proline--tRNA ligase, cytoplasmic isoform X1 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 104456261 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 104415139 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 104445683 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 104457015 leucine--tRNA ligase, cytoplasmic isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 104456019 methionine--tRNA ligase, cytoplasmic K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 104420917 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 104433269 glutamine--tRNA ligase, cytoplasmic K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 104438211 arginine--tRNA ligase, cytoplasmic isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 104435945 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 104422280 LOW QUALITY PROTEIN: lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 104438360 LOW QUALITY PROTEIN: aspartate--tRNA ligase 2, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 104425631 LOW QUALITY PROTEIN: aspartate--tRNA ligase 2, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 120286009 aspartate--tRNA ligase 2, cytoplasmic-like K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 104419807 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 104420983 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
C Other AARSs
D 104421590 alanine--tRNA ligase isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 104419008 alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 104436522 LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 104456493 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 104441916 LOW QUALITY PROTEIN: asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 104453561 glycine--tRNA ligase, mitochondrial 1 K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 104455646 LOW QUALITY PROTEIN: glycine--tRNA ligase, mitochondrial 1 K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 104434863 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104434853 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104433554 threonine--tRNA ligase, mitochondrial 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 120286506 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104447986 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 104415549 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 104433268 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104441430 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104430835 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104449711 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 104451001 LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 104443321 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104449799 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104426340 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104437429 LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 104440747 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 104432343 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 104444916 LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 104433953 tyrosine--tRNA ligase 1, cytoplasmic isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104419074 LOW QUALITY PROTEIN: tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104424861 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104428686 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 104437803 tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 104444978 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 104421804 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 104431597 D-aminoacyl-tRNA deacylase-like K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
B tRNA modification factors
C Deaminases
D 104443461 tRNA-specific adenosine deaminase TAD1 isoform X1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 104443458 LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase TAD1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 120293459 tRNA-specific adenosine deaminase TAD1-like K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 104445106 tRNA-specific adenosine deaminase TAD2 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104444934 tRNA-specific adenosine deaminase TAD2-like isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104444781 tRNA-specific adenosine deaminase subunit TAD2-like K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 108960188 tRNA-specific adenosine deaminase TAD2-like K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104446809 tRNA-specific adenosine deaminase TAD2 isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104444733 tRNA-specific adenosine deaminase TAD2-like isoform X1 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104431396 tRNA-specific adenosine deaminase TAD2-like K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 104438159 LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase TAD3 K15442 TAD3; tRNA-specific adenosine deaminase 3
D 104452576 tRNA-specific adenosine deaminase TAD3 isoform X1 K15442 TAD3; tRNA-specific adenosine deaminase 3
D 104429075 tRNA-specific adenosine deaminase TAD3 isoform X1 K15442 TAD3; tRNA-specific adenosine deaminase 3
D 104440272 tRNA-specific adenosine deaminase TAD3-like K15442 TAD3; tRNA-specific adenosine deaminase 3
D 104440275 tRNA-specific adenosine deaminase TAD3 K15442 TAD3; tRNA-specific adenosine deaminase 3
D 120292028 tRNA-specific adenosine deaminase TAD3-like K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 104414087 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 104453390 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
C Methylthiotransferase
D 104449848 threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1 K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 104422046 probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 isoform X2 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 104454457 tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 104421670 zinc finger CCCH domain-containing protein 24 K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 104418316 LOW QUALITY PROTEIN: multisite-specific tRNA:(cytosine-C(5))-methyltransferase K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D 104415765 RNA cytosine-C(5)-methyltransferase NSUN2 isoform X1 K15334 NCL1; multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:2.1.1.202]
D 104425053 uncharacterized protein LOC104425053 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 104436627 tRNA (guanine(37)-N1)-methyltransferase 2 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 104450170 tRNA (guanine(37)-N1)-methyltransferase 1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 104419242 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 104448829 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X1 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 104426388 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 104442228 LOW QUALITY PROTEIN: tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104438979 tRNA (guanine-N(7)-)-methyltransferase-like K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104441277 tRNA (guanine-N(7)-)-methyltransferase isoform X2 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104450002 uncharacterized methyltransferase C3H7.11 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 104456636 tRNA (carboxymethyluridine(34)-5-O)-methyltransferase K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 104444193 LOW QUALITY PROTEIN: alkylated DNA repair protein ALKBH8 homolog K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 104445589 tRNA (guanine(9)-N1)-methyltransferase K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 104452761 tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 104456606 tRNA:m(4)X modification enzyme TRM13 homolog K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 104426655 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 104441306 multifunctional methyltransferase subunit TRM112 homolog A K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 104437064 LOW QUALITY PROTEIN: tRNA (cytosine(38)-C(5))-methyltransferase 2 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 104435987 tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 104449025 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 104445708 tRNA wybutosine-synthesizing protein 2/3/4 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 104441368 leucine carboxyl methyltransferase 1 homolog isoform X1 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
C Psudouridine synthases
D 104434080 tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104420000 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104451663 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104423165 putative tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104449568 tRNA pseudouridine(38/39) synthase isoform X2 K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 104422653 LOW QUALITY PROTEIN: uncharacterized protein LOC104422653 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 104430336 multisubstrate pseudouridine synthase 7 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 104426125 RNA pseudouridine synthase 7 K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
D 104448796 RNA pseudouridine synthase 7 isoform X1 K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
D 104427780 RNA pseudouridine synthase 7-like K15454 PUS9; tRNA pseudouridine32 synthase [EC:5.4.99.28]
D 104450297 tRNA pseudouridine synthase Pus10 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
C Thiolation factors
D 104433836 tRNA-specific 2-thiouridylase MnmA isoform X1 K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 104450302 cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 104444989 cytoplasmic tRNA 2-thiolation protein 2 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 104418408 LOW QUALITY PROTEIN: cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 104444290 ubiquitin-related modifier 1 homolog 2 K12161 URM1; ubiquitin related modifier 1
D 104448196 adenylyltransferase and sulfurtransferase MOCS3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 104453646 EKC/KEOPS complex subunit bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 104434007 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104457189 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104444372 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104447745 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104418740 EKC/KEOPS complex subunit TPRKB isoform X1 K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 104424518 uncharacterized protein LOC104424518 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
C Elongator complex
D 104420921 LOW QUALITY PROTEIN: elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 104453753 elongator complex protein 2 K11374 ELP2; elongator complex protein 2
D 104417155 elongator complex protein 3 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 104434295 elongator complex protein 4 K11375 ELP4; elongator complex protein 4
D 120285871 elongator complex protein 4-like K11375 ELP4; elongator complex protein 4
D 104449435 elongator complex protein 5 K11376 ELP5; elongator complex protein 5
D 104454171 elongator complex protein 6 isoform X2 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 104450137 diphthamide biosynthesis protein 3 K15455 DPH3; diphthamide biosynthesis protein 3
D 104453244 diphthamide biosynthesis protein 3 K15455 DPH3; diphthamide biosynthesis protein 3
D 104453906 protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 104432869 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 104448519 tRNA dimethylallyltransferase 9 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104421269 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104421270 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104449817 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 104418086 LOW QUALITY PROTEIN: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 104447993 queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X1 K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 104456003 queuine tRNA-ribosyltransferase accessory subunit 2 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 104436569 tRNA A64-2'-O-ribosylphosphate transferase isoform X1 K15463 RIT1; tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
D 104433861 THUMP domain-containing protein 1 homolog K06963 TAN1; tRNA acetyltransferase TAN1
D 104415843 tRNA(His) guanylyltransferase 2 isoform X1 K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 104421097 arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 104421099 LOW QUALITY PROTEIN: arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 104421098 LOW QUALITY PROTEIN: arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 104421102 arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 104421101 LOW QUALITY PROTEIN: arginyl-tRNA--protein transferase 2 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 120289141 arginyl-tRNA--protein transferase 2-like K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
B tRNA degradation factors
C TRAMP complex
D 104448435 terminal nucleotidyltransferase 4B K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 104435888 DExH-box ATP-dependent RNA helicase DExH10 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D 104452464 LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH9 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C Rapid tRNA decay (RTD) pathway factors
D 104448827 5'-3' exoribonuclease 3 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 104450152 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 104445556 LOW QUALITY PROTEIN: putative PAP-specific phosphatase, mitochondrial K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 104452704 PAP-specific phosphatase HAL2-like K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D 120295442 LOW QUALITY PROTEIN: putative PAP-specific phosphatase, mitochondrial K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 104425963 LOW QUALITY PROTEIN: tRNase Z TRZ1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104423087 tRNAse Z TRZ4, mitochondrial K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104424699 tRNase Z TRZ2, chloroplastic K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 104436596 ribonuclease II, chloroplastic/mitochondrial isoform X1 K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D 104456460 ribonuclease 2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453944 ribonuclease 3 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453945 ribonuclease 1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 104453946 ribonuclease 1 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 120285934 ribonuclease 2-like K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 104445683 leucine--tRNA ligase, chloroplastic/mitochondrial K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 104457015 leucine--tRNA ligase, cytoplasmic isoform X1 K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 104448437 proline--tRNA ligase, chloroplastic/mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 104421463 proline--tRNA ligase, cytoplasmic K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 104424617 proline--tRNA ligase, cytoplasmic isoform X1 K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 104433953 tyrosine--tRNA ligase 1, cytoplasmic isoform X1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104419074 LOW QUALITY PROTEIN: tyrosine--tRNA ligase, chloroplastic/mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104424861 tyrosine--tRNA ligase 1, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 104428686 tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 104437803 tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 104434863 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104434853 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104433554 threonine--tRNA ligase, mitochondrial 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 120286506 LOW QUALITY PROTEIN: threonine--tRNA ligase, chloroplastic/mitochondrial 2-like K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 104456261 isoleucine--tRNA ligase, cytoplasmic K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 104415139 isoleucine--tRNA ligase, chloroplastic/mitochondrial K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 104435945 lysine--tRNA ligase, cytoplasmic K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 104422280 LOW QUALITY PROTEIN: lysine--tRNA ligase, chloroplastic/mitochondrial K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 104421590 alanine--tRNA ligase isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 104419008 alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 104449711 valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 104451001 LOW QUALITY PROTEIN: valine--tRNA ligase, mitochondrial 1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 104456019 methionine--tRNA ligase, cytoplasmic K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 104420917 methionine--tRNA ligase, chloroplastic/mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 104447986 serine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 104415549 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 104419807 aspartate--tRNA ligase, chloroplastic/mitochondrial K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 104415787 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 104433268 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104441430 cysteine--tRNA ligase 2, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104430835 cysteine--tRNA ligase, chloroplastic/mitochondrial isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 104415925 glutamate--tRNA ligase, chloroplastic/mitochondrial K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 104456909 glutamate--tRNA ligase, cytoplasmic isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 120295728 glutamate--tRNA ligase, chloroplastic/mitochondrial-like K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 104433269 glutamine--tRNA ligase, cytoplasmic K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 104438211 arginine--tRNA ligase, cytoplasmic isoform X1 K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 104437429 LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, chloroplastic/mitochondrial K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 104440747 phenylalanine--tRNA ligase alpha subunit, cytoplasmic K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 104432343 phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 104444916 LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit, cytoplasmic K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 104443321 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104449799 histidine--tRNA ligase, cytoplasmic K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104426340 histidine--tRNA ligase, chloroplastic/mitochondrial K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 104436522 LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic 1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 104456493 asparagine--tRNA ligase, cytoplasmic 2 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 104441916 LOW QUALITY PROTEIN: asparagine--tRNA ligase, chloroplastic/mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 104444978 D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 104421804 D-aminoacyl-tRNA deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 104431597 D-aminoacyl-tRNA deacylase-like K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
B tRNA modification factors
C Deaminases
D 104453846 tRNA(adenine(34)) deaminase, chloroplastic K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
D 104421892 tRNA-dihydrouridine(20/20a) synthase isoform X1 K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
C Methylthiotransferases
C Methyltransferases
D 104442228 LOW QUALITY PROTEIN: tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104438979 tRNA (guanine-N(7)-)-methyltransferase-like K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104441277 tRNA (guanine-N(7)-)-methyltransferase isoform X2 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 104449817 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 104454671 putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D 104435987 tRNA (adenine(37)-N6)-methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 104414104 uncharacterized tRNA/rRNA methyltransferase YsgA K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D 104434080 tRNA pseudouridine synthase A isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104420000 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104451663 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104423165 putative tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 104422653 LOW QUALITY PROTEIN: uncharacterized protein LOC104422653 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 104430336 multisubstrate pseudouridine synthase 7 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 104418408 LOW QUALITY PROTEIN: cysteine desulfurase, mitochondrial K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 104453646 EKC/KEOPS complex subunit bud32 K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 104434007 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104457189 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104444372 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1 K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 104447745 probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 104418086 LOW QUALITY PROTEIN: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 104448519 tRNA dimethylallyltransferase 9 isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104421269 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104421270 tRNA dimethylallyltransferase 2 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 104432869 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 104449741 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
B tRNA degradation factors
C 104443314 LOW QUALITY PROTEIN: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 104422623 polyribonucleotide nucleotidyltransferase 2, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024