+E Transcription factors KO
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Transcription Factors - Emiliania huxleyi
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
D EMIHUDRAFT_223806 hypothetical protein K10779 ATRX; transcriptional regulator ATRX
D EMIHUDRAFT_238814 hypothetical protein K10779 ATRX; transcriptional regulator ATRX
D EMIHUDRAFT_228661 hypothetical protein K10779 ATRX; transcriptional regulator ATRX
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
D EMIHUDRAFT_466520 hypothetical protein K07466 RFA1; replication factor A1
C Cys2HisCys zinc factors
D EMIHUDRAFT_415328 hypothetical protein K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48]
D EMIHUDRAFT_349715 putative histone acetyltransferase K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48]
D EMIHUDRAFT_365731 putative histone acetyltransferase K11308 MYST1; histone acetyltransferase MYST1 [EC:2.3.1.48]
D EMIHUDRAFT_237390 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein
D EMIHUDRAFT_238478 hypothetical protein K15263 LYER; cell growth-regulating nucleolar protein
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D EMIHUDRAFT_458278 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D EMIHUDRAFT_215571 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
D EMIHUDRAFT_227257 hypothetical protein K09250 CNBP; cellular nucleic acid-binding protein
D EMIHUDRAFT_47717 hypothetical protein K09250 CNBP; cellular nucleic acid-binding protein
D EMIHUDRAFT_221331 hypothetical protein K09250 CNBP; cellular nucleic acid-binding protein
D EMIHUDRAFT_64934 hypothetical protein K09250 CNBP; cellular nucleic acid-binding protein
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
D EMIHUDRAFT_243560 hypothetical protein K18490 OTX2; homeobox protein OTX2
C Homeo domain LIM
D EMIHUDRAFT_57343 hypothetical protein K09377 CSRP; cysteine and glycine-rich protein
D EMIHUDRAFT_57931 hypothetical protein K09377 CSRP; cysteine and glycine-rich protein
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
D EMIHUDRAFT_469932 hypothetical protein K09313 CUTL; homeobox protein cut-like
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
D EMIHUDRAFT_465850 hypothetical protein K06620 E2F3; transcription factor E2F3
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
D EMIHUDRAFT_232396 hypothetical protein K09420 MYB; transcriptional activator Myb
D EMIHUDRAFT_98688 hypothetical protein K09420 MYB; transcriptional activator Myb
C Tryptophan clusters Myb, Myb-like factors
D EMIHUDRAFT_196686 hypothetical protein K09425 K09425; Myb-like DNA-binding protein FlbD
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
D EMIHUDRAFT_254328 hypothetical protein K23041 DEAF1; deformed epidermal autoregulatory factor 1
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
D EMIHUDRAFT_414529 hypothetical protein K09272 SSRP1; FACT complex subunit SSRP1/POB3
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
D EMIHUDRAFT_244194 hypothetical protein K08064 NFYA; nuclear transcription factor Y, alpha
D EMIHUDRAFT_256109 hypothetical protein K08065 NFYB; nuclear transcription Y subunit beta
D EMIHUDRAFT_232814 hypothetical protein K08065 NFYB; nuclear transcription Y subunit beta
D EMIHUDRAFT_70663 hypothetical protein K08065 NFYB; nuclear transcription Y subunit beta
D EMIHUDRAFT_58243 hypothetical protein K08065 NFYB; nuclear transcription Y subunit beta
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
D EMIHUDRAFT_469732 hypothetical protein K04498 EP300; E1A/CREB-binding protein [EC:2.3.1.48]
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
D EMIHUDRAFT_214525 hypothetical protein K09286 EREBP; EREBP-like factor
D EMIHUDRAFT_256186 hypothetical protein K09286 EREBP; EREBP-like factor
D EMIHUDRAFT_225200 hypothetical protein K09286 EREBP; EREBP-like factor
D EMIHUDRAFT_201351 hypothetical protein K09286 EREBP; EREBP-like factor
D EMIHUDRAFT_204691 hypothetical protein K09286 EREBP; EREBP-like factor
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
D EMIHUDRAFT_58207 hypothetical protein K22145 TMEM18; transmembrane protein 18
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AProkaryotic type
B Helix-turn-helix
C AraC family
C LysR family
C DeoR family
C LacI family
C GntR family
C TetR/AcrR family
C Lrp/AsnC family
C LuxR family
C MarR family
C MerR family
C Fur family
C IclR family
C CRP/FNR family
C Rrf2 family
C ArsR family
C XRE family
C PadR family
C Other families
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0