+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Geotalea daltonii
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
E Geob_0648 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
E Geob_0648 TPR domain protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
D Geob_0711 DNA cytosine C5-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E Geob_2153 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D Geob_3817 hup-1; histone-like protein K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
D Geob_3359 ihfA-1; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D Geob_2365 ihfB-2; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D Geob_2788 ihfB-1; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D Geob_3714 DnaJ-related molecular chaperone K05516 cbpA; curved DNA-binding protein
D Geob_2322 hda; DnaA regulatory inactivator Hda K02313 dnaA; chromosomal replication initiator protein
D Geob_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Geob_3106 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D Geob_3597 chromosome segregation ATPase SMC K03529 smc; chromosome segregation protein
D Geob_3015 scpA; chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Geob_3014 scpB; chromosome segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
C Divisome proteins
D Geob_0785 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Geob_2651 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Geob_0774 ftsI; peptidoglycan transglycosylase and transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Geob_3802 FtsK/SpoIIIE domain protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Geob_0773 ftsL; cell division septum formation protein FtsL, putative K03586 ftsL; cell division protein FtsL
D Geob_0784 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Geob_0779 ftsW; cell division septum formation N-acetylglucosaminyl-N-acetylmuramyl-(pentapeptide)-diphospho-undecaprenol flippase FtsW K03588 ftsW; cell division protein FtsW
D Geob_2652 ftsX; cell division ABC transporter, membrane protein FtsX, putative K09811 ftsX; cell division transport system permease protein
D Geob_0786 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Geob_3594 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D Geob_2762 N-acetylmuramyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Geob_1225 acrA; efflux pump, RND family, membrane fusion lipoprotein K03585 acrA; membrane fusion protein, multidrug efflux system
D Geob_0949 efflux pump, RND family, membrane fusion lipoprotein K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D Geob_1795 cell division protein DivIVA, putative K04074 divIVA; cell division initiation protein
C Other chromosome partitioning proteins
D Geob_3485 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Geob_3479 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Geob_3478 mreD; cell shape-determining protein MreD, putative K03571 mreD; rod shape-determining protein MreD
D Geob_3476 rodA; cell shape-determining N-acetylglucosaminyl-N-acetylmuramyl-(pentapeptide)-diphospho-undecaprenol flippase RodA K05837 rodA; rod shape determining protein RodA
D Geob_0454 chromosome partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D Geob_0453 ParB-like nuclease domain protein, putative transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Geob_3836 mnmG; tRNA (uridine34-C5)-methyleneglycinetransferase, FAD-binding subunit K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Geob_3835 rsmG; 16S rRNA (guanosine527-N7)-methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Geob_1561 trmFO; tRNA (uridine54-C5)-methylenetransferase/reductase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Geob_0753 xerC; site-specific recombinase XerC K03733 xerC; integrase/recombinase XerC
D Geob_2764 xerD; integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D Geob_1142 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Geob_0188 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Geob_0537 engB; GTPase EngB K03978 engB; GTP-binding protein
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 10, 2024