+E Transcription factors KO #

  Transcription Factors - Gemella haemolysans

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D NCTC10459_01061 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family C DeoR family D NCTC10459_00029 lacR_1; Lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor D NCTC10459_00035 lacR_2; Lactose phosphotransferase system repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D NCTC10459_01345 ccpN; Control catabolite protein of gluconeogenesis K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator C LacI family D NCTC10459_00006 ccpA; Probable catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D NCTC10459_01329 treR_2; Trehalose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor C GntR family D NCTC10459_00296 treR_1; Trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D NCTC10459_01338 treR_3; Trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D NCTC10459_01599 mngR_1; DNA-binding transcriptional repressor MngR K07979 ytrA; GntR family transcriptional regulator C TetR/AcrR family C Lrp/AsnC family C LuxR family C MarR family D NCTC10459_01178 transcriptional repressor MprA K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D NCTC10459_01181 sarZ; Staphylococcal accessory regulator Z K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D NCTC10459_00631 glnR; HTH-type transcriptional regulator glnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D NCTC10459_00147 merR1; Mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein C Fur family D NCTC10459_00273 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NCTC10459_01139 zur; Zinc-specific metallo-regulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family C Rrf2 family C ArsR family D NCTC10459_01060 ziaR; Transcriptional repressor smtB homolog K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D NCTC10459_01648 aseR; HTH-type transcriptional repressor AseR K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons C XRE family C PadR family D NCTC10459_00265 lineage-specific thermal regulator protein K10947 K10947; PadR family transcriptional regulator D NCTC10459_00336 transcriptional regulator, Acidobacterial, PadR-family K10947 K10947; PadR family transcriptional regulator C Other families D NCTC10459_00852 mntR; Manganese transport regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D NCTC10459_01319 purR; Pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor D NCTC10459_00821 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D NCTC10459_00185 noc; Nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCTC10459_00187 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NCTC10459_00317 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D NCTC10459_01387 tenA; Putative thiaminase-2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D NCTC10459_00609 ctsR; Transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D NCTC10459_01751 DNA-binding transcriptional activator PspC K03973 pspC; phage shock protein C D NCTC10459_01504 cggR; Central glycolytic genes regulator K05311 cggR; central glycolytic genes regulator D NCTC10459_00624 transcription attenuation protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D NCTC10459_00568 pyrR; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NCTC10459_00669 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0