+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Halorubrum sp. CBA1229 </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:halq00010]
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
D      Hrr1229_009670 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Hrr1229_008605 fructose-1,6-bisphosphatase	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      Hrr1229_008600 aldolase	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      Hrr1229_015385 class I fructose-bisphosphate aldolase family protein	K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D      Hrr1229_003440 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      Hrr1229_008835 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Hrr1229_013600 type II glyceraldehyde-3-phosphate dehydrogenase	K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D      Hrr1229_008830 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      Hrr1229_006675 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Hrr1229_010160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_002880 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Hrr1229_003035 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      Hrr1229_002535 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006225 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006220 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Hrr1229_006215 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_002650 2-oxoacid:acceptor oxidoreductase subunit alpha	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002655 2-oxoacid:ferredoxin oxidoreductase subunit beta	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_004770 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_004950 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C    00020 Citrate cycle (TCA cycle) [PATH:halq00020]
D      Hrr1229_002665 citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      Hrr1229_006440 aconitate hydratase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_016740 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_017885 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_009020 icd; isocitrate dehydrogenase (NADP(+))	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_002650 2-oxoacid:acceptor oxidoreductase subunit alpha	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002655 2-oxoacid:ferredoxin oxidoreductase subunit beta	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_011085 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Hrr1229_011080 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Hrr1229_007630 acetyl-CoA hydrolase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      Hrr1229_012255 FAD-binding protein	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Hrr1229_012260 succinate dehydrogenase/fumarate reductase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Hrr1229_012270 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Hrr1229_012265 succinate dehydrogenase	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      Hrr1229_011070 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_002535 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006225 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006220 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Hrr1229_006215 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
C    00030 Pentose phosphate pathway [PATH:halq00030]
D      Hrr1229_009670 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Hrr1229_006340 NAD(P)-dependent oxidoreductase	K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D      Hrr1229_013250 6-phosphogluconate dehydrogenase	K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D      Hrr1229_007445 rpiA; ribose-5-phosphate isomerase RpiA	K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D      Hrr1229_011100 deoC; deoxyribose-phosphate aldolase	K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D      Hrr1229_011850 deoC; deoxyribose-phosphate aldolase	K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D      Hrr1229_011455 carbohydrate kinase family protein	K00852 rbsK; ribokinase [EC:2.7.1.15]
D      Hrr1229_014960 phosphomannomutase	K22199 ppm; phosphopentomutase [EC:5.4.2.7]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_009500 carbohydrate kinase	K26208 E2.7.1.239; alpha-D-ribose-1-phosphate 5-kinase (ATP) [EC:2.7.1.239]
D      Hrr1229_009495 ribose 1,5-bisphosphate isomerase	K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D      Hrr1229_011300 prs; ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      Hrr1229_006170 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Hrr1229_010850 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Hrr1229_000785 SDR family oxidoreductase	K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D      Hrr1229_000700 glucose 1-dehydrogenase	K22969 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D      Hrr1229_006090 GMC family oxidoreductase	K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D      Hrr1229_007680 mandelate racemase/muconate lactonizing enzyme family protein	K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D      Hrr1229_014835 mandelate racemase/muconate lactonizing enzyme family protein	K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D      Hrr1229_004095 sugar kinase	K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D      Hrr1229_000990 aldehyde ferredoxin oxidoreductase	K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D      Hrr1229_013120 aldehyde ferredoxin oxidoreductase	K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D      Hrr1229_014530 aldehyde ferredoxin oxidoreductase family protein	K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D      Hrr1229_005020 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_017495 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_008600 aldolase	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      Hrr1229_015385 class I fructose-bisphosphate aldolase family protein	K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D      Hrr1229_008605 fructose-1,6-bisphosphatase	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C    00040 Pentose and glucuronate interconversions [PATH:halq00040]
D      Hrr1229_009910 cupin domain-containing protein	K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D      Hrr1229_017475 mannonate dehydratase	K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D      Hrr1229_001700 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Hrr1229_009085 Gfo/Idh/MocA family oxidoreductase	K14273 xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]
D      Hrr1229_008625 Gfo/Idh/MocA family oxidoreductase	K24442 xacA; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,4-lactone-forming) [EC:1.1.1.424]
D      Hrr1229_017480 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D      Hrr1229_017670 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C    00051 Fructose and mannose metabolism [PATH:halq00051]
D      Hrr1229_011155 sugar kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_008605 fructose-1,6-bisphosphatase	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      Hrr1229_015260 carbohydrate kinase family protein	K27475 khk; ketohexokinase [EC:2.7.1.3]
D      Hrr1229_008600 aldolase	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      Hrr1229_015385 class I fructose-bisphosphate aldolase family protein	K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D      Hrr1229_003440 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    00052 Galactose metabolism [PATH:halq00052]
D      Hrr1229_001300 GDP-mannose 4,6-dehydratase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_001320 GDP-mannose 4,6-dehydratase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_001640 NAD-dependent epimerase/dehydratase family protein	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_006075 NAD-dependent epimerase/dehydratase family protein	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
D      Hrr1229_010855 dgoD; galactonate dehydratase	K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D      Hrr1229_007680 mandelate racemase/muconate lactonizing enzyme family protein	K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D      Hrr1229_014835 mandelate racemase/muconate lactonizing enzyme family protein	K05308 gnaD; gluconate/galactonate dehydratase [EC:4.2.1.140]
D      Hrr1229_008420 glycoside hydrolase family 32 protein	K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C    00053 Ascorbate and aldarate metabolism [PATH:halq00053]
D      Hrr1229_001700 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_017400 glucarate dehydratase	K01706 gudD; glucarate dehydratase [EC:4.2.1.40]
D      Hrr1229_017480 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D      Hrr1229_017670 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D      Hrr1229_004955 mandelate racemase/muconate lactonizing enzyme family protein	K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C    00500 Starch and sucrose metabolism [PATH:halq00500]
D      Hrr1229_008420 glycoside hydrolase family 32 protein	K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D      Hrr1229_008425 glycoside hydrolase family 68 protein	K00692 sacB; levansucrase [EC:2.4.1.10]
D      Hrr1229_004130 alpha amylase	K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D      Hrr1229_014235 alpha-amylase	K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D      Hrr1229_003700 glucan 1,4-alpha-glucosidase	K01178 SGA1; glucoamylase [EC:3.2.1.3]
D      Hrr1229_014225 malQ; 4-alpha-glucanotransferase	K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D      Hrr1229_003200 glycosyltransferase family 4 protein	K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
D      Hrr1229_009670 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Hrr1229_011155 sugar kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:halq00520]
D      Hrr1229_011155 sugar kinase	K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D      Hrr1229_001600 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Hrr1229_001625 glmM; phosphoglucosamine mutase	K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D      Hrr1229_001610 NTP transferase domain-containing protein	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      Hrr1229_001325 nucleotide sugar dehydrogenase	K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D      Hrr1229_001175 acylneuraminate cytidylyltransferase family protein	K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_001700 UDP-glucose/GDP-mannose dehydrogenase family protein	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      Hrr1229_001300 GDP-mannose 4,6-dehydratase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_001320 GDP-mannose 4,6-dehydratase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_001640 NAD-dependent epimerase/dehydratase family protein	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_006075 NAD-dependent epimerase/dehydratase family protein	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      Hrr1229_009670 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C    00620 Pyruvate metabolism [PATH:halq00620]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_002650 2-oxoacid:acceptor oxidoreductase subunit alpha	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002655 2-oxoacid:ferredoxin oxidoreductase subunit beta	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002535 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006225 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006220 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Hrr1229_006215 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D      Hrr1229_002880 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Hrr1229_007910 carbamoyl phosphate synthase	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Hrr1229_014955 acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_007630 acetyl-CoA hydrolase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      Hrr1229_004770 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_004950 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_000165 VOC family protein	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      Hrr1229_005125 VOC family protein	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      Hrr1229_005005 MBL fold metallo-hydrolase	K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D      Hrr1229_010830 NADP-dependent malic enzyme	K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_011070 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Hrr1229_009265 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Hrr1229_003035 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_001950 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:halq00630]
D      Hrr1229_011330 isocitrate lyase/PEP mutase family protein	K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_002665 citrate synthase	K01647 CS; citrate synthase [EC:2.3.3.1]
D      Hrr1229_006440 aconitate hydratase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_016740 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_017885 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_014010 MaoC family dehydratase N-terminal domain-containing protein	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      Hrr1229_000110 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Hrr1229_007910 carbamoyl phosphate synthase	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Hrr1229_007925 acyl-CoA carboxylase subunit beta	K19312 pccB; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D      Hrr1229_007920 hypothetical protein	K22568 pccX; acetyl-CoA/propionyl-CoA carboxylase, PccX subunit [EC:6.4.1.2 6.4.1.3]
D      Hrr1229_004230 cobalamin B12-binding domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      Hrr1229_000070 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_000100 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_012095 HAD family hydrolase	K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D      Hrr1229_002125 HAD-IIB family hydrolase	K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D      Hrr1229_015775 alanine--glyoxylate aminotransferase family protein	K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D      Hrr1229_002420 gltB; glutamate synthase large subunit	K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_009895 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Hrr1229_013230 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      Hrr1229_013235 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      Hrr1229_004605 aminomethyl transferase family protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_015545 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_013225 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
D      Hrr1229_005020 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_017495 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_009485 HAD-IA family hydrolase	K26210 E3.1.3.109; ribulose-1,5-bisphosphate 5-phosphatase [EC:3.1.3.109]
D      Hrr1229_009490 class II aldolase/adducin family protein	K01636 K01636; ribulose 1-phosphate aldolase [EC:4.1.2.-]
D      Hrr1229_010810 tartrate dehydrogenase	K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D      Hrr1229_006170 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Hrr1229_010850 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D      Hrr1229_015495 ACT domain-containing protein	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      Hrr1229_007615 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00640 Propanoate metabolism [PATH:halq00640]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_004770 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_004950 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_007910 carbamoyl phosphate synthase	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Hrr1229_007925 acyl-CoA carboxylase subunit beta	K19312 pccB; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D      Hrr1229_007920 hypothetical protein	K22568 pccX; acetyl-CoA/propionyl-CoA carboxylase, PccX subunit [EC:6.4.1.2 6.4.1.3]
D      Hrr1229_001030 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_009360 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_000110 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Hrr1229_004230 cobalamin B12-binding domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      Hrr1229_000070 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_000100 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_011080 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Hrr1229_011085 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Hrr1229_002175 methylglyoxal synthase	K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C    00650 Butanoate metabolism [PATH:halq00650]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_008595 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Hrr1229_001750 enoyl-CoA hydratase/isomerase family protein	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      Hrr1229_010815 enoyl-CoA hydratase/isomerase family protein	K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D      Hrr1229_014010 MaoC family dehydratase N-terminal domain-containing protein	K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D      Hrr1229_010810 tartrate dehydrogenase	K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D      Hrr1229_012255 FAD-binding protein	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Hrr1229_012260 succinate dehydrogenase/fumarate reductase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Hrr1229_012270 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Hrr1229_012265 succinate dehydrogenase	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      Hrr1229_001030 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_009360 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_013370 succinate-semialdehyde dehydrogenase (NADP(+))	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Hrr1229_007630 acetyl-CoA hydrolase	K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_002650 2-oxoacid:acceptor oxidoreductase subunit alpha	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002655 2-oxoacid:ferredoxin oxidoreductase subunit beta	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_009245 hydroxymethylglutaryl-CoA synthase family protein	K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D      Hrr1229_002575 NAD(P)-dependent alcohol dehydrogenase	K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-]
D      Hrr1229_001955 ilvB; biosynthetic-type acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_010835 thiamine pyrophosphate-requiring protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_014055 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_017390 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_001960 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C    00660 C5-Branched dibasic acid metabolism [PATH:halq00660]
D      Hrr1229_001955 ilvB; biosynthetic-type acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_010835 thiamine pyrophosphate-requiring protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_014055 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_017390 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_001960 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Hrr1229_011080 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Hrr1229_011085 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Hrr1229_005595 MaoC family dehydratase	K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D      Hrr1229_004135 2-isopropylmalate synthase	K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D      Hrr1229_001970 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      Hrr1229_001975 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      Hrr1229_001980 NAD-dependent isocitrate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C    00562 Inositol phosphate metabolism [PATH:halq00562]
D      Hrr1229_009295 inositol monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      Hrr1229_003440 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:halq00190]
D      Hrr1229_002760 NADH-quinone oxidoreductase subunit A	K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D      Hrr1229_002755 NADH-quinone oxidoreductase subunit B	K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D      Hrr1229_002750 NADH-quinone oxidoreductase subunit C	K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D      Hrr1229_014630 NADH-quinone oxidoreductase subunit C	K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D      Hrr1229_002745 NADH-quinone oxidoreductase subunit H	K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D      Hrr1229_002740 NADH-quinone oxidoreductase subunit I	K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D      Hrr1229_002730 hypothetical protein	K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D      Hrr1229_002735 NADH-quinone oxidoreductase subunit J	K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D      Hrr1229_002725 nuoK; NADH-quinone oxidoreductase subunit NuoK	K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D      Hrr1229_002720 nuoL; NADH-quinone oxidoreductase subunit L	K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D      Hrr1229_002715 NuoM family protein	K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D      Hrr1229_002710 NADH-quinone oxidoreductase subunit N	K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D      Hrr1229_002505 FAD-dependent oxidoreductase	K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D      Hrr1229_012255 FAD-binding protein	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Hrr1229_012260 succinate dehydrogenase/fumarate reductase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Hrr1229_012270 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Hrr1229_012265 succinate dehydrogenase	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      Hrr1229_009125 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Hrr1229_000280 cytochrome C oxidase subunit IV family protein	K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D      Hrr1229_009100 b(o/a)3-type cytochrome-c oxidase subunit 1	K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D      Hrr1229_000305 cbb3-type cytochrome c oxidase subunit I	K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D      Hrr1229_016595 cbb3-type cytochrome c oxidase subunit I	K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D      Hrr1229_000310 coxB; cytochrome c oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      Hrr1229_009105 cytochrome C oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      Hrr1229_016600 coxB; cytochrome c oxidase subunit II	K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D      Hrr1229_012755 cytochrome oxidase assembly	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Hrr1229_005485 ATP synthase subunit A	K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D      Hrr1229_005480 V-type ATP synthase subunit B	K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D      Hrr1229_005495 V-type ATP synthase subunit C	K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D      Hrr1229_005475 V-type ATP synthase subunit D	K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D      Hrr1229_005500 V-type ATP synthase subunit E	K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D      Hrr1229_005490 V-type ATP synthase subunit F	K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D      Hrr1229_005515 ahaH; ATP synthase archaeal subunit H	K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D      Hrr1229_005510 V-type ATP synthase subunit I	K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D      Hrr1229_005505 hypothetical protein	K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D      Hrr1229_004835 inorganic diphosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation in photosynthetic organisms
C    00720 Carbon fixation pathways in prokaryotes [PATH:halq00720]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_003035 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      Hrr1229_009265 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_011070 class II fumarate hydratase	K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D      Hrr1229_012255 FAD-binding protein	K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D      Hrr1229_012260 succinate dehydrogenase/fumarate reductase iron-sulfur subunit	K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D      Hrr1229_012270 sdhC; succinate dehydrogenase, cytochrome b556 subunit	K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D      Hrr1229_012265 succinate dehydrogenase	K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D      Hrr1229_011085 sucD; succinate--CoA ligase subunit alpha	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      Hrr1229_011080 sucC; ADP-forming succinate--CoA ligase subunit beta	K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D      Hrr1229_012710 enoyl-CoA hydratase/isomerase family protein	K15016 K15016; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_002650 2-oxoacid:acceptor oxidoreductase subunit alpha	K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_002655 2-oxoacid:ferredoxin oxidoreductase subunit beta	K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D      Hrr1229_009020 icd; isocitrate dehydrogenase (NADP(+))	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Hrr1229_006440 aconitate hydratase	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_016740 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_017885 acnA; aconitate hydratase AcnA	K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D      Hrr1229_000110 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Hrr1229_000070 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_000100 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_004230 cobalamin B12-binding domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      Hrr1229_015550 formate--tetrahydrofolate ligase	K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D      Hrr1229_012375 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C    00680 Methane metabolism [PATH:halq00680]
D      Hrr1229_013150 glutathione-independent formaldehyde dehydrogenase	K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D      Hrr1229_013155 fdhF; formate dehydrogenase subunit alpha	K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6]
D      Hrr1229_009895 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Hrr1229_015775 alanine--glyoxylate aminotransferase family protein	K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D      Hrr1229_005020 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_017495 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_009265 ppc; phosphoenolpyruvate carboxylase	K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_008600 aldolase	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      Hrr1229_015385 class I fructose-bisphosphate aldolase family protein	K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D      Hrr1229_008605 fructose-1,6-bisphosphatase	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      Hrr1229_003010 methenyltetrahydromethanopterin cyclohydrolase	K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
D      Hrr1229_013655 5,10-methylenetetrahydromethanopterin reductase	K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D      Hrr1229_003035 ppsA; phosphoenolpyruvate synthase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      Hrr1229_006675 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Hrr1229_010160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      Hrr1229_004545 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007060 phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_017460 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007005 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      Hrr1229_009800 cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofH	K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147]
D      Hrr1229_010315 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG	K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32]
D      Hrr1229_010320 cofC; 2-phospho-L-lactate guanylyltransferase	K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D      Hrr1229_009040 2-phospho-L-lactate transferase	K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D      Hrr1229_013650 coenzyme F420-0:L-glutamate ligase	K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
D      Hrr1229_003030 mfnA; tyrosine decarboxylase MfnA	K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C    00910 Nitrogen metabolism [PATH:halq00910]
D      Hrr1229_007615 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D      Hrr1229_015160 molybdopterin-dependent oxidoreductase	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_015155 respiratory nitrate reductase subunit beta	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_011830 molybdopterin-dependent oxidoreductase	K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D      Hrr1229_011720 cbb3-type cytochrome c oxidase subunit I	K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D      Hrr1229_000430 nitrous-oxide reductase	K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D      Hrr1229_000670 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_001000 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_010655 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_002420 gltB; glutamate synthase large subunit	K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D      Hrr1229_012340 carbonic anhydrase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:halq00920]
D      Hrr1229_001935 aliphatic sulfonate ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011810 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011815 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001940 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001945 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_011820 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_009590 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_001670 phosphoadenosine phosphosulfate reductase family protein	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D      Hrr1229_010915 NAD(P)/FAD-dependent oxidoreductase	K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D      Hrr1229_000870 DoxX family protein	K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D      Hrr1229_001790 DoxX family protein	K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D      Hrr1229_016735 DoxX family protein	K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D      Hrr1229_017880 DoxX family protein	K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D      Hrr1229_013695 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_015465 rhodanese	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_001760 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      Hrr1229_014805 PLP-dependent cysteine synthase family protein	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      Hrr1229_007835 metX; homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      Hrr1229_017710 molybdopterin-dependent oxidoreductase	K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D      Hrr1229_017705 4Fe-4S dicluster domain-containing protein	K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D      Hrr1229_017700 nrfD; polysulfide reductase NrfD	K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D      Hrr1229_016730 isoprenylcysteine carboxylmethyltransferase family protein	K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
D      Hrr1229_017875 isoprenylcysteine carboxylmethyltransferase family protein	K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis [PATH:halq00061]
D      Hrr1229_007910 carbamoyl phosphate synthase	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Hrr1229_014005 3-oxoacyl-ACP synthase	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Hrr1229_002680 glucose 1-dehydrogenase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_007665 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_009845 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_011120 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation [PATH:halq00071]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Hrr1229_015245 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Hrr1229_007685 acyl-CoA dehydrogenase family protein	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Hrr1229_011120 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00073 Cutin, suberine and wax biosynthesis
C    00100 Steroid biosynthesis [PATH:halq00100]
D      Hrr1229_016115 squalene/phytoene synthase family protein	K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:halq00561]
D      Hrr1229_005020 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_017495 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_014455 dhaK; dihydroxyacetone kinase subunit DhaK	K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D      Hrr1229_014450 dhaL; dihydroxyacetone kinase subunit L	K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D      Hrr1229_014445 PTS mannose transporter subunit IID	K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D      Hrr1229_002100 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      Hrr1229_015590 glycosyltransferase family 4 protein	K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
C    00564 Glycerophospholipid metabolism [PATH:halq00564]
D      Hrr1229_002095 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      Hrr1229_013705 FAD-dependent oxidoreductase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      Hrr1229_002090 glpB; glycerol-3-phosphate dehydrogenase subunit GlpB	K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D      Hrr1229_002085 anaerobic glycerol-3-phosphate dehydrogenase subunit C	K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D      Hrr1229_012435 glycerophosphodiester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      Hrr1229_007975 protein sorting system archaetidylserine decarboxylase	K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D      Hrr1229_004295 CDP-alcohol phosphatidyltransferase family protein	K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      Hrr1229_009145 phospholipase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D      Hrr1229_003390 NAD(P)-dependent glycerol-1-phosphate dehydrogenase	K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D      Hrr1229_005920 putative phosphoglycerol geranylgeranyltransferase	K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D      Hrr1229_012015 geranylgeranylglycerol-phosphate geranylgeranyltransferase	K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D      Hrr1229_005880 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase	K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D      Hrr1229_003130 protein sorting system archaetidylserine synthase	K19665 pssA; archaetidylserine synthase [EC:2.7.8.38]
D      Hrr1229_002660 NAD(P)/FAD-dependent oxidoreductase	K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C    00565 Ether lipid metabolism
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
C    00591 Linoleic acid metabolism
C    00592 alpha-Linolenic acid metabolism [PATH:halq00592]
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01040 Biosynthesis of unsaturated fatty acids
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:halq00230]
D      Hrr1229_006470 NUDIX hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      Hrr1229_008555 NUDIX hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      Hrr1229_014960 phosphomannomutase	K22199 ppm; phosphopentomutase [EC:5.4.2.7]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_011300 prs; ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      Hrr1229_014355 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      Hrr1229_013515 phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      Hrr1229_014855 purD; phosphoribosylamine--glycine ligase	K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D      Hrr1229_002435 purN; phosphoribosylglycinamide formyltransferase	K01492 purNH; phosphoribosylglycinamide/phosphoribosylaminoimidazolecarboxamide formyltransferase [EC:2.1.2.2 2.1.2.3]
D      Hrr1229_004055 purL; phosphoribosylformylglycinamidine synthase subunit PurL	K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D      Hrr1229_015500 purS; phosphoribosylformylglycinamidine synthase subunit PurS	K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D      Hrr1229_015505 purQ; phosphoribosylformylglycinamidine synthase I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Hrr1229_002000 phosphoribosylformylglycinamidine cyclo-ligase	K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D      Hrr1229_002770 5-(carboxyamino)imidazole ribonucleotide synthase	K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D      Hrr1229_002765 purE; 5-(carboxyamino)imidazole ribonucleotide mutase	K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D      Hrr1229_011770 phosphoribosylaminoimidazolesuccinocarboxamide synthase	K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D      Hrr1229_002440 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      Hrr1229_007155 IMP cyclohydrolase	K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D      Hrr1229_001755 purine phosphoribosyltransferase family protein	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Hrr1229_005380 hypothetical protein	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Hrr1229_015815 5'-nucleotidase C-terminal domain-containing protein	K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D      Hrr1229_009170 surE; 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_014870 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_015770 guanosine monophosphate reductase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Hrr1229_016100 guaB; IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Hrr1229_012350 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Hrr1229_003095 DUF84 family protein	K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D      Hrr1229_009365 non-canonical purine NTP pyrophosphatase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      Hrr1229_002675 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_002930 GMP synthase subunit A	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_007605 guaA; glutamine-hydrolyzing GMP synthase subunit GuaA	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_015575 type 1 glutamine amidotransferase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_009230 nucleoside phosphorylase	K26212 K26212; guanosine phosphorylase [EC:2.4.2.15]
D      Hrr1229_007500 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_008890 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_007495 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      Hrr1229_000655 cyaB; class IV adenylate cyclase	K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D      Hrr1229_015225 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      Hrr1229_010375 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Hrr1229_014070 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Hrr1229_012155 HIT domain-containing protein	K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C    00240 Pyrimidine metabolism [PATH:halq00240]
D      Hrr1229_013825 carB; carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      Hrr1229_009165 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      Hrr1229_014645 pyrB; aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      Hrr1229_014640 aspartate carbamoyltransferase regulatory subunit	K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D      Hrr1229_012040 dihydroorotase	K01465 URA4; dihydroorotase [EC:3.5.2.3]
D      Hrr1229_006830 quinone-dependent dihydroorotate dehydrogenase	K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D      Hrr1229_004105 orotate phosphoribosyltransferase	K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D      Hrr1229_013350 pyrF; orotidine-5'-phosphate decarboxylase	K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D      Hrr1229_008945 UMP kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      Hrr1229_012350 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Hrr1229_007600 CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      Hrr1229_013010 AAA family ATPase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      Hrr1229_015480 AAA family ATPase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      Hrr1229_013435 udk; uridine kinase	K00876 udk; uridine kinase [EC:2.7.1.48]
D      Hrr1229_015815 5'-nucleotidase C-terminal domain-containing protein	K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D      Hrr1229_009170 surE; 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_014870 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_002510 nucleoside phosphorylase	K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D      Hrr1229_007075 upp; uracil phosphoribosyltransferase	K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D      Hrr1229_002515 cdd; cytidine deaminase	K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D      Hrr1229_002860 dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      Hrr1229_007500 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_008890 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_007495 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      Hrr1229_010345 dTMP kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      Hrr1229_006445 deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      Hrr1229_013485 thymidine kinase	K00857 tdk; thymidine kinase [EC:2.7.1.21]
D      Hrr1229_011235 thyA; thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      Hrr1229_014210 Zn-dependent hydrolase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:halq00250]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_009510 asparaginase	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      Hrr1229_009035 isoaspartyl peptidase/L-asparaginase	K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D      Hrr1229_003150 asparagine synthetase B	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      Hrr1229_015775 alanine--glyoxylate aminotransferase family protein	K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D      Hrr1229_001055 ornithine cyclodeaminase family protein	K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D      Hrr1229_004435 ornithine cyclodeaminase family protein	K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D      Hrr1229_007390 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Hrr1229_007385 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Hrr1229_015225 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      Hrr1229_002440 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      Hrr1229_014645 pyrB; aspartate carbamoyltransferase	K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D      Hrr1229_014640 aspartate carbamoyltransferase regulatory subunit	K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D      Hrr1229_001030 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_009360 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_013370 succinate-semialdehyde dehydrogenase (NADP(+))	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Hrr1229_000670 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_001000 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_010655 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_013825 carB; carbamoyl-phosphate synthase large subunit	K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D      Hrr1229_009165 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D      Hrr1229_015505 purQ; phosphoribosylformylglycinamidine synthase I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Hrr1229_001600 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Hrr1229_014355 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C    00260 Glycine, serine and threonine metabolism [PATH:halq00260]
D      Hrr1229_006940 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Hrr1229_012715 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Hrr1229_006145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Hrr1229_010455 homoserine kinase	K00872 thrB; homoserine kinase [EC:2.7.1.39]
D      Hrr1229_002525 pyridoxal-phosphate dependent enzyme	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_004870 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_007065 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_010715 pyridoxal-phosphate dependent enzyme	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_015355 low specificity L-threonine aldolase	K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D      Hrr1229_009895 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Hrr1229_015775 alanine--glyoxylate aminotransferase family protein	K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D      Hrr1229_005020 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_017495 DUF4147 domain-containing protein	K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D      Hrr1229_006675 histidine phosphatase family protein	K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D      Hrr1229_010160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      Hrr1229_004545 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007060 phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_017460 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007005 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D      Hrr1229_013230 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      Hrr1229_013235 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      Hrr1229_004605 aminomethyl transferase family protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_015545 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_013225 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
D      Hrr1229_000680 PLP-dependent transferase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_013955 cystathionine gamma-synthase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_001015 ilvA; threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_004705 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_005455 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_015390 tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      Hrr1229_015395 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Hrr1229_017550 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Hrr1229_000970 aspartate aminotransferase family protein	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      Hrr1229_000995 M24 family metallopeptidase	K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
C    00270 Cysteine and methionine metabolism [PATH:halq00270]
D      Hrr1229_001760 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D      Hrr1229_014805 PLP-dependent cysteine synthase family protein	K01738 cysK; cysteine synthase [EC:2.5.1.47]
D      Hrr1229_000680 PLP-dependent transferase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_013955 cystathionine gamma-synthase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_015785 PLP-dependent cysteine synthase family protein	K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D      Hrr1229_010120 methionine synthase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      Hrr1229_010125 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      Hrr1229_014610 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      Hrr1229_004335 mtnP; S-methyl-5'-thioadenosine phosphorylase	K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D      Hrr1229_003840 amidohydrolase family protein	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      Hrr1229_006590 amidohydrolase	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      Hrr1229_009375 5'-deoxyadenosine deaminase	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      Hrr1229_010220 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_015890 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_016030 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_006600 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Hrr1229_006940 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Hrr1229_012715 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Hrr1229_006145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Hrr1229_007835 metX; homoserine O-acetyltransferase	K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D      Hrr1229_007510 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      Hrr1229_007830 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D      Hrr1229_003595 aminotransferase class IV	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_005865 branched-chain amino acid transaminase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_013695 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_015465 rhodanese	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_007305 malate dehydrogenase	K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D      Hrr1229_004545 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007060 phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_017460 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C    00280 Valine, leucine and isoleucine degradation [PATH:halq00280]
D      Hrr1229_003595 aminotransferase class IV	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_005865 branched-chain amino acid transaminase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_015245 acyl-CoA dehydrogenase family protein	K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Hrr1229_007910 carbamoyl phosphate synthase	K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D      Hrr1229_007925 acyl-CoA carboxylase subunit beta	K19312 pccB; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D      Hrr1229_007920 hypothetical protein	K22568 pccX; acetyl-CoA/propionyl-CoA carboxylase, PccX subunit [EC:6.4.1.2 6.4.1.3]
D      Hrr1229_000110 mce; methylmalonyl-CoA epimerase	K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D      Hrr1229_004230 cobalamin B12-binding domain-containing protein	K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D      Hrr1229_000070 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_000100 methylmalonyl-CoA mutase family protein	K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_009245 hydroxymethylglutaryl-CoA synthase family protein	K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C    00290 Valine, leucine and isoleucine biosynthesis [PATH:halq00290]
D      Hrr1229_001015 ilvA; threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_004705 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_005455 threonine ammonia-lyase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D      Hrr1229_004135 2-isopropylmalate synthase	K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21]
D      Hrr1229_001970 leuC; 3-isopropylmalate dehydratase large subunit	K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D      Hrr1229_001975 leuD; 3-isopropylmalate dehydratase small subunit	K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D      Hrr1229_001980 NAD-dependent isocitrate dehydrogenase	K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D      Hrr1229_001955 ilvB; biosynthetic-type acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_010835 thiamine pyrophosphate-requiring protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_014055 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_017390 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_001960 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Hrr1229_001965 ilvC; ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      Hrr1229_015525 ilvD; dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      Hrr1229_003595 aminotransferase class IV	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_005865 branched-chain amino acid transaminase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_001950 2-isopropylmalate synthase	K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C    00300 Lysine biosynthesis [PATH:halq00300]
D      Hrr1229_006145 homoserine dehydrogenase	K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D      Hrr1229_006940 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Hrr1229_012715 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Hrr1229_003520 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_003620 dihydrodipicolinate synthase family protein	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_017425 dihydrodipicolinate synthase family protein	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_003515 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D      Hrr1229_003510 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D      Hrr1229_010925 ArgE/DapE family deacylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Hrr1229_003495 M20/M25/M40 family metallo-hydrolase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Hrr1229_003500 dapF; diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      Hrr1229_003505 lysA; diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      Hrr1229_005330 hypothetical protein	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_007380 lysW; lysine biosynthesis protein LysW	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_008285 hypothetical protein	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_007365 acetylglutamate/acetylaminoadipate kinase	K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D      Hrr1229_007370 N-acetyl-gamma-glutamyl-phosphate reductase	K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D      Hrr1229_007360 aspartate aminotransferase family protein	K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D      Hrr1229_007355 [LysW]-lysine hydrolase	K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C    00310 Lysine degradation [PATH:halq00310]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_007685 acyl-CoA dehydrogenase family protein	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_013370 succinate-semialdehyde dehydrogenase (NADP(+))	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D      Hrr1229_007625 lhgO; L-2-hydroxyglutarate oxidase	K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D      Hrr1229_007895 3-keto-5-aminohexanoate cleavage protein	K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00220 Arginine biosynthesis [PATH:halq00220]
D      Hrr1229_007350 argF; ornithine carbamoyltransferase	K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D      Hrr1229_007390 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Hrr1229_007385 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Hrr1229_002490 rocF; arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      Hrr1229_015505 purQ; phosphoribosylformylglycinamidine synthase I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_000670 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_001000 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_010655 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_000540 M20/M25/M40 family metallo-hydrolase	K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D      Hrr1229_007230 M20/M25/M40 family metallo-hydrolase	K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D      Hrr1229_005330 hypothetical protein	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_007380 lysW; lysine biosynthesis protein LysW	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_008285 hypothetical protein	K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D      Hrr1229_007375 lysX; lysine biosynthesis protein LysX	K19412 argX; glutamate---[amino group carrier protein] ligase [EC:6.3.2.60]
D      Hrr1229_007365 acetylglutamate/acetylaminoadipate kinase	K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D      Hrr1229_007370 N-acetyl-gamma-glutamyl-phosphate reductase	K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D      Hrr1229_007360 aspartate aminotransferase family protein	K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D      Hrr1229_007355 [LysW]-lysine hydrolase	K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C    00330 Arginine and proline metabolism [PATH:halq00330]
D      Hrr1229_006520 creatininase family protein	K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D      Hrr1229_014585 creatininase family protein	K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D      Hrr1229_010545 hydantoinase/oxoprolinase family protein	K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D      Hrr1229_010550 hydantoinase B/oxoprolinase family protein	K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D      Hrr1229_009760 pyruvoyl-dependent arginine decarboxylase subunit alpha	K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D      Hrr1229_013395 speB; agmatinase	K01480 speB; agmatinase [EC:3.5.3.11]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_011650 acetamidase/formamidase family protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013325 peptide amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_002490 rocF; arginase	K01476 rocF; arginase [EC:3.5.3.1]
D      Hrr1229_015595 proC; pyrroline-5-carboxylate reductase	K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D      Hrr1229_000370 proline dehydrogenase family protein	K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D      Hrr1229_005875 proline dehydrogenase family protein	K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D      Hrr1229_015600 proB; glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      Hrr1229_015605 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00340 Histidine metabolism [PATH:halq00340]
D      Hrr1229_007470 ATP phosphoribosyltransferase	K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D      Hrr1229_004920 hisE; phosphoribosyl-ATP diphosphatase	K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D      Hrr1229_011220 hisI; phosphoribosyl-AMP cyclohydrolase	K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D      Hrr1229_007175 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase	K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D      Hrr1229_005030 hisH; imidazole glycerol phosphate synthase subunit HisH	K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D      Hrr1229_003685 hisF; imidazole glycerol phosphate synthase subunit HisF	K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D      Hrr1229_007170 hisB; imidazoleglycerol-phosphate dehydratase HisB	K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Hrr1229_008480 hisD; histidinol dehydrogenase	K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00350 Tyrosine metabolism [PATH:halq00350]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Hrr1229_003030 mfnA; tyrosine decarboxylase MfnA	K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D      Hrr1229_013370 succinate-semialdehyde dehydrogenase (NADP(+))	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00360 Phenylalanine metabolism [PATH:halq00360]
D      Hrr1229_008595 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Hrr1229_013575 katG; catalase/peroxidase HPI	K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D      Hrr1229_011650 acetamidase/formamidase family protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013325 peptide amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C    00380 Tryptophan metabolism [PATH:halq00380]
D      Hrr1229_004990 kynU; kynureninase	K01556 KYNU; kynureninase [EC:3.7.1.3]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_007685 acyl-CoA dehydrogenase family protein	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_011650 acetamidase/formamidase family protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013325 peptide amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013575 katG; catalase/peroxidase HPI	K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:halq00400]
D      Hrr1229_015385 class I fructose-bisphosphate aldolase family protein	K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10]
D      Hrr1229_015375 3-dehydroquinate synthase II	K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24]
D      Hrr1229_003080 type I 3-dehydroquinate dehydratase	K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D      Hrr1229_003570 shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D      Hrr1229_011675 shikimate kinase	K00891 aroK; shikimate kinase [EC:2.7.1.71]
D      Hrr1229_003425 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase	K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D      Hrr1229_001740 aroC; chorismate synthase	K01736 aroC; chorismate synthase [EC:4.2.3.5]
D      Hrr1229_003585 anthranilate synthase component I family protein	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_011575 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_003590 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      Hrr1229_011570 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      Hrr1229_006485 anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      Hrr1229_011585 trpD; anthranilate phosphoribosyltransferase	K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D      Hrr1229_011580 phosphoribosylanthranilate isomerase	K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D      Hrr1229_015400 indole-3-glycerol-phosphate synthase	K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D      Hrr1229_015390 tryptophan synthase subunit alpha	K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D      Hrr1229_015395 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Hrr1229_017550 trpB; tryptophan synthase subunit beta	K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D      Hrr1229_011670 chorismate mutase	K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D      Hrr1229_015685 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      Hrr1229_005425 pheA; prephenate dehydratase	K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism [PATH:halq00410]
D      Hrr1229_003030 mfnA; tyrosine decarboxylase MfnA	K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D      Hrr1229_001030 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_009360 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_000080 phosphopantothenate/pantothenate synthetase	K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D      Hrr1229_014210 Zn-dependent hydrolase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C    00430 Taurine and hypotaurine metabolism [PATH:halq00430]
D      Hrr1229_011940 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      Hrr1229_001055 ornithine cyclodeaminase family protein	K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D      Hrr1229_004435 ornithine cyclodeaminase family protein	K19244 ala; alanine dehydrogenase [EC:1.4.1.1]
D      Hrr1229_003530 aldehyde dehydrogenase family protein	K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81]
C    00440 Phosphonate and phosphinate metabolism
D      Hrr1229_007865 MBL fold metallo-hydrolase	K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C    00450 Selenocompound metabolism [PATH:halq00450]
D      Hrr1229_010120 methionine synthase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      Hrr1229_010125 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase	K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D      Hrr1229_000680 PLP-dependent transferase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_013955 cystathionine gamma-synthase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_009405 cysteine desulfurase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      Hrr1229_009685 aminotransferase class V-fold PLP-dependent enzyme	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      Hrr1229_000780 NAD(P)/FAD-dependent oxidoreductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      Hrr1229_004715 FAD-dependent oxidoreductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      Hrr1229_013710 NAD(P)/FAD-dependent oxidoreductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      Hrr1229_002845 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:halq00460]
D      Hrr1229_011940 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      Hrr1229_009510 asparaginase	K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D      Hrr1229_009035 isoaspartyl peptidase/L-asparaginase	K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D      Hrr1229_009895 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Hrr1229_007615 acetamidase/formamidase family protein	K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C    00470 D-Amino acid metabolism [PATH:halq00470]
D      Hrr1229_015505 purQ; phosphoribosylformylglycinamidine synthase I	K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D      Hrr1229_013175 DUF1611 domain-containing protein	K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D      Hrr1229_013180 dipeptide epimerase	K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D      Hrr1229_003500 dapF; diaminopimelate epimerase	K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D      Hrr1229_003505 lysA; diaminopimelate decarboxylase	K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D      Hrr1229_017480 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D      Hrr1229_017670 aldehyde dehydrogenase family protein	K19588 dopDH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C    00480 Glutathione metabolism [PATH:halq00480]
D      Hrr1229_011940 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D      Hrr1229_001805 glutamate--cysteine ligase	K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D      Hrr1229_010250 NAD(P)/FAD-dependent oxidoreductase	K03423 E1.8.1.13; bis-gamma-glutamylcystine reductase [EC:1.8.1.13]
D      Hrr1229_009020 icd; isocitrate dehydrogenase (NADP(+))	K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D      Hrr1229_013250 6-phosphogluconate dehydrogenase	K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis
C    00550 Peptidoglycan biosynthesis
C    00552 Teichoic acid biosynthesis [PATH:halq00552]
D      Hrr1229_001235 undecaprenyl-diphosphate phosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:halq00543]
D      Hrr1229_001760 serine acetyltransferase	K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:halq00730]
D      Hrr1229_006270 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D      Hrr1229_002890 thiazole biosynthesis protein	K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D      Hrr1229_010300 thiE; thiamine phosphate synthase	K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D      Hrr1229_011315 thiL; thiamine-phosphate kinase	K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D      Hrr1229_010375 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Hrr1229_014070 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00740 Riboflavin metabolism [PATH:halq00740]
D      Hrr1229_011200 GTP cyclohydrolase IIa	K08096 gch3; GTP cyclohydrolase IIa [EC:3.5.4.29]
D      Hrr1229_003545 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase	K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D      Hrr1229_005860 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase	K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D      Hrr1229_000530 6,7-dimethyl-8-ribityllumazine synthase	K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D      Hrr1229_005915 riboflavin synthase	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      Hrr1229_005855 CTP-dependent riboflavin kinase	K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D      Hrr1229_006470 NUDIX hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      Hrr1229_008555 NUDIX hydrolase	K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D      Hrr1229_000855 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C    00750 Vitamin B6 metabolism [PATH:halq00750]
D      Hrr1229_015230 aldo/keto reductase	K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65]
D      Hrr1229_002525 pyridoxal-phosphate dependent enzyme	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_004870 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_007065 threonine synthase	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_010715 pyridoxal-phosphate dependent enzyme	K01733 thrC; threonine synthase [EC:4.2.3.1]
D      Hrr1229_010460 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS	K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D      Hrr1229_004915 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C    00760 Nicotinate and nicotinamide metabolism [PATH:halq00760]
D      Hrr1229_008535 nicotinate phosphoribosyltransferase	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      Hrr1229_015815 5'-nucleotidase C-terminal domain-containing protein	K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D      Hrr1229_009170 surE; 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_014870 5'/3'-nucleotidase SurE	K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D      Hrr1229_000900 nicotinamide-nucleotide adenylyltransferase	K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D      Hrr1229_006475 NAD+ synthase	K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D      Hrr1229_013920 NAD+ synthase	K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D      Hrr1229_013465 CinA family protein	K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D      Hrr1229_003375 NAD(+)/NADH kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      Hrr1229_013885 NAD(+)/NADH kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D      Hrr1229_000845 isochorismatase family protein	K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D      Hrr1229_013370 succinate-semialdehyde dehydrogenase (NADP(+))	K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C    00770 Pantothenate and CoA biosynthesis [PATH:halq00770]
D      Hrr1229_001955 ilvB; biosynthetic-type acetolactate synthase large subunit	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_010835 thiamine pyrophosphate-requiring protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_014055 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_017390 thiamine pyrophosphate-binding protein	K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D      Hrr1229_001960 ilvN; acetolactate synthase small subunit	K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D      Hrr1229_001965 ilvC; ketol-acid reductoisomerase	K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D      Hrr1229_015525 ilvD; dihydroxy-acid dehydratase	K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D      Hrr1229_008370 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase	K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D      Hrr1229_004875 ketopantoate reductase family protein	K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D      Hrr1229_003865 sugar kinase	K06982 pok; pantoate kinase [EC:2.7.1.169]
D      Hrr1229_000080 phosphopantothenate/pantothenate synthetase	K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D      Hrr1229_000765 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D      Hrr1229_001815 phosphopantetheine adenylyltransferase	K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      Hrr1229_008985 GTP-dependent dephospho-CoA kinase family protein	K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D      Hrr1229_003595 aminotransferase class IV	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_005865 branched-chain amino acid transaminase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_014210 Zn-dependent hydrolase	K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D      Hrr1229_003030 mfnA; tyrosine decarboxylase MfnA	K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C    00780 Biotin metabolism [PATH:halq00780]
D      Hrr1229_002680 glucose 1-dehydrogenase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_007665 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_009845 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_014410 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C    00785 Lipoic acid metabolism [PATH:halq00785]
D      Hrr1229_011910 lipA; lipoyl synthase	K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D      Hrr1229_011395 lipoate--protein ligase family protein	K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D      Hrr1229_003760 lipoate--protein ligase family protein	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_002535 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006225 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      Hrr1229_006220 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      Hrr1229_006215 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      Hrr1229_013230 gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA	K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D      Hrr1229_013235 gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB	K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D      Hrr1229_004605 aminomethyl transferase family protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_015545 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_013225 gcvH; glycine cleavage system protein GcvH	K02437 gcvH; glycine cleavage system H protein
C    00790 Folate biosynthesis [PATH:halq00790]
D      Hrr1229_014575 folP; dihydropteroate synthase	K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D      Hrr1229_004725 folP; dihydropteroate synthase	K24102 folCP; dihydrofolate synthase / dihydropteroate synthase [EC:6.3.2.12 2.5.1.15]
D      Hrr1229_004430 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      Hrr1229_011240 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      Hrr1229_004270 6-carboxytetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      Hrr1229_011470 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      Hrr1229_009530 GTP cyclohydrolase I FolE2	K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D      Hrr1229_006580 DHNA family protein	K09739 mptD; dihydroneopterin aldolase [EC:4.1.2.25]
D      Hrr1229_014580 DUF115 domain-containing protein	K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D      Hrr1229_009915 GHMP kinase	K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D      Hrr1229_010240 moaA; GTP 3',8-cyclase MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      Hrr1229_015555 moaC; cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      Hrr1229_008940 molybdopterin synthase	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      Hrr1229_011565 molybdenum cofactor biosynthesis protein MoaB	K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      Hrr1229_010955 molybdopterin molybdotransferase MoeA	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Hrr1229_011415 molybdopterin biosynthesis protein	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Hrr1229_011420 molybdopterin molybdotransferase MoeA	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Hrr1229_010950 nucleotidyltransferase family protein	K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D      Hrr1229_010465 molybdenum cofactor guanylyltransferase	K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D      Hrr1229_017685 molybdenum cofactor guanylyltransferase	K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C    00670 One carbon pool by folate [PATH:halq00670]
D      Hrr1229_004430 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      Hrr1229_011240 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      Hrr1229_015550 formate--tetrahydrofolate ligase	K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D      Hrr1229_012375 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      Hrr1229_009895 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      Hrr1229_002435 purN; phosphoribosylglycinamide formyltransferase	K01492 purNH; phosphoribosylglycinamide/phosphoribosylaminoimidazolecarboxamide formyltransferase [EC:2.1.2.2 2.1.2.3]
D      Hrr1229_004605 aminomethyl transferase family protein	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_015545 gcvT; glycine cleavage system aminomethyltransferase GcvT	K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D      Hrr1229_011235 thyA; thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      Hrr1229_015495 ACT domain-containing protein	K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D      Hrr1229_014510 5-formyltetrahydrofolate cyclo-ligase	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:halq00860]
D      Hrr1229_009180 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Hrr1229_011370 glutamyl-tRNA reductase	K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D      Hrr1229_007395 glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      Hrr1229_006850 hemB; porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      Hrr1229_009400 hemC; hydroxymethylbilane synthase	K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D      Hrr1229_009390 uroporphyrinogen-III synthase	K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D      Hrr1229_011170 heme-binding protein	K25033 chdC; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D      Hrr1229_009395 cobA; uroporphyrinogen-III C-methyltransferase	K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D      Hrr1229_011375 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase	K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D      Hrr1229_006495 Lrp/AsnC family transcriptional regulator	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      Hrr1229_011380 Lrp/AsnC family transcriptional regulator	K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D      Hrr1229_012000 TIGR04347 family pseudo-SAM/SPASM protein	K22226 ahbC; Fe-coproporphyrin III synthase
D      Hrr1229_015635 radical SAM protein	K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D      Hrr1229_009125 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Hrr1229_012755 cytochrome oxidase assembly	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Hrr1229_005415 hypothetical protein	K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D      Hrr1229_006790 cobalt-precorrin-7 (C(5))-methyltransferase	K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D      Hrr1229_005265 cobyrinic acid a,c-diamide synthase	K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D      Hrr1229_012475 cob(I)yrinic acid a,c-diamide adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Hrr1229_005295 cob(I)yrinic acid a,c-diamide adenosyltransferase	K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Hrr1229_005300 cobyric acid synthase	K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D      Hrr1229_005270 cobalamin biosynthesis protein	K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D      Hrr1229_005290 adenosylcobinamide amidohydrolase	K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D      Hrr1229_005280 NTP transferase domain-containing protein	K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62]
D      Hrr1229_005275 cobS; adenosylcobinamide-GDP ribazoletransferase	K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D      Hrr1229_005285 pyridoxal phosphate-dependent class II aminotransferase	K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D      Hrr1229_016975 multicopper oxidase family protein	K22552 mmcO; multicopper oxidase [EC:1.16.3.1]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:halq00130]
D      Hrr1229_000855 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      Hrr1229_014315 isochorismate synthase	K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D      Hrr1229_014885 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D      Hrr1229_000475 o-succinylbenzoate synthase	K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D      Hrr1229_014270 menE; o-succinylbenzoate--CoA ligase	K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D      Hrr1229_011805 1,4-dihydroxy-2-naphthoyl-CoA synthase	K01661 menB; naphthoate synthase [EC:4.1.3.36]
D      Hrr1229_000480 1,4-dihydroxy-2-naphthoate polyprenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis [PATH:halq00900]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_009245 hydroxymethylglutaryl-CoA synthase family protein	K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D      Hrr1229_009810 hmgA; hydroxymethylglutaryl-CoA reductase (NADPH)	K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D      Hrr1229_013100 mvk; mevalonate kinase	K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D      Hrr1229_014665 diphosphomevalonate decarboxylase	K17942 pmd; phosphomevalonate decarboxylase [EC:4.1.1.99]
D      Hrr1229_013105 acetylglutamate kinase	K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D      Hrr1229_000855 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D      Hrr1229_011505 NUDIX domain-containing protein	K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D      Hrr1229_005340 polyprenyl synthetase family protein	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Hrr1229_012185 polyprenyl synthetase family protein	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Hrr1229_010000 undecaprenyl diphosphate synthase family protein	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      Hrr1229_012105 uppS; di-trans,poly-cis-decaprenylcistransferase	K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:halq00909]
D      Hrr1229_016115 squalene/phytoene synthase family protein	K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis [PATH:halq00906]
D      Hrr1229_008490 phytoene/squalene synthase family protein	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      Hrr1229_010280 prenyltransferase	K20616 lyeJ; lycopene elongase/hydratase (dihydrobisanhydrobacterioruberin-forming) [EC:2.5.1.150]
D      Hrr1229_002465 crtI; phytoene desaturase	K20611 crtD; 1-hydroxy-2-isopentenylcarotenoid 3,4-desaturase [EC:1.3.99.37]
D      Hrr1229_002950 crtI; phytoene desaturase	K20611 crtD; 1-hydroxy-2-isopentenylcarotenoid 3,4-desaturase [EC:1.3.99.37]
D      Hrr1229_010285 crtI; phytoene desaturase	K20611 crtD; 1-hydroxy-2-isopentenylcarotenoid 3,4-desaturase [EC:1.3.99.37]
D      Hrr1229_010275 carotenoid biosynthesis protein	K08977 cruF; bisanhydrobacterioruberin hydratase [EC:4.2.1.161]
D      Hrr1229_007000 lycopene cyclase domain-containing protein	K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
C    00907 Pinene, camphor and geraniol degradation [PATH:halq00907]
D      Hrr1229_010295 SDR family oxidoreductase	K13775 atuG; citronellol/citronellal dehydrogenase
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
C    01059 Biosynthesis of enediyne antibiotics
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis
D      Hrr1229_001190 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_015715 NDP-sugar synthase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001605 NTP transferase domain-containing protein	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001315 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001610 NTP transferase domain-containing protein	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides
D      Hrr1229_014315 isochorismate synthase	K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C    01055 Biosynthesis of vancomycin group antibiotics
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
D      Hrr1229_012580 penicillin acylase family protein	K01434 pac; penicillin G amidase [EC:3.5.1.11]
C    00332 Carbapenem biosynthesis [PATH:halq00332]
D      Hrr1229_015600 proB; glutamate 5-kinase	K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D      Hrr1229_015605 glutamate-5-semialdehyde dehydrogenase	K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C    00261 Monobactam biosynthesis [PATH:halq00261]
D      Hrr1229_006940 aspartate kinase	K00928 lysC; aspartate kinase [EC:2.7.2.4]
D      Hrr1229_012715 asd; aspartate-semialdehyde dehydrogenase	K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D      Hrr1229_003520 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_003620 dihydrodipicolinate synthase family protein	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_017425 dihydrodipicolinate synthase family protein	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      Hrr1229_003515 dapB; 4-hydroxy-tetrahydrodipicolinate reductase	K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:halq00521]
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
D      Hrr1229_009430 glmM; phosphoglucosamine mutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      Hrr1229_009295 inositol monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      Hrr1229_001190 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_015715 NDP-sugar synthase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001605 NTP transferase domain-containing protein	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001315 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001610 NTP transferase domain-containing protein	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
D      Hrr1229_006695 ROK family protein	K25026 glk; glucokinase [EC:2.7.1.2]
C    00525 Acarbose and validamycin biosynthesis
D      Hrr1229_001190 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_015715 NDP-sugar synthase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001605 NTP transferase domain-containing protein	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001315 sugar nucleotidyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      Hrr1229_001610 NTP transferase domain-containing protein	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    00401 Novobiocin biosynthesis [PATH:halq00401]
D      Hrr1229_015685 prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
D      Hrr1229_003585 anthranilate synthase component I family protein	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_011575 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_003590 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      Hrr1229_011570 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C    00333 Prodigiosin biosynthesis
D      Hrr1229_002680 glucose 1-dehydrogenase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_007665 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_009845 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
C    00999 Biosynthesis of various plant secondary metabolites [PATH:halq00999]
D      Hrr1229_014610 methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      Hrr1229_003570 shikimate dehydrogenase	K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:halq00362]
D      Hrr1229_002685 alpha/beta fold hydrolase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      Hrr1229_008910 alpha/beta fold hydrolase	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D      Hrr1229_004225 VOC family protein	K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D      Hrr1229_000485 carboxymuconolactone decarboxylase family protein	K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D      Hrr1229_007685 acyl-CoA dehydrogenase family protein	K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D      Hrr1229_008595 3-hydroxybutyryl-CoA dehydrogenase	K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C    00627 Aminobenzoate degradation [PATH:halq00627]
D      Hrr1229_011650 acetamidase/formamidase family protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013325 peptide amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_014955 acylphosphatase	K01512 acyP; acylphosphatase [EC:3.6.1.7]
D      Hrr1229_000855 UbiX family flavin prenyltransferase	K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation [PATH:halq00625]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D      Hrr1229_000380 aldehyde dehydrogenase family protein	K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D      Hrr1229_013150 glutathione-independent formaldehyde dehydrogenase	K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D      Hrr1229_008040 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D      Hrr1229_009785 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D      Hrr1229_009970 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C    00361 Chlorocyclohexane and chlorobenzene degradation [PATH:halq00361]
D      Hrr1229_004225 VOC family protein	K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D      Hrr1229_008040 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D      Hrr1229_009785 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D      Hrr1229_009970 haloacid dehalogenase type II	K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C    00623 Toluene degradation
C    00622 Xylene degradation [PATH:halq00622]
D      Hrr1229_004225 VOC family protein	K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C    00633 Nitrotoluene degradation
D      Hrr1229_002315 2-oxoacid:acceptor oxidoreductase subunit alpha	K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D      Hrr1229_002310 2-ketoglutarate ferredoxin oxidoreductase subunit beta	K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
C    00642 Ethylbenzene degradation
D      Hrr1229_010155 thiolase family protein	K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C    00643 Styrene degradation [PATH:halq00643]
D      Hrr1229_011650 acetamidase/formamidase family protein	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_013325 peptide amidase	K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D      Hrr1229_004225 VOC family protein	K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C    00791 Atrazine degradation
C    00930 Caprolactam degradation
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
C    00626 Naphthalene degradation [PATH:halq00626]
D      Hrr1229_012780 zinc-dependent alcohol dehydrogenase family protein	K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation [PATH:halq00624]
D      Hrr1229_000835 4,5-dihydroxyphthalate decarboxylase	K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D      Hrr1229_000860 4,5-dihydroxyphthalate decarboxylase	K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
D      Hrr1229_001505 ABC transporter substrate-binding protein	K04102 pht5; 4,5-dihydroxyphthalate decarboxylase [EC:4.1.1.55]
C    00365 Furfural degradation
C    00984 Steroid degradation
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:halq03020]
D      Hrr1229_006405 rpoB; DNA-directed RNA polymerase subunit B	K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
D      Hrr1229_006400 DNA-directed RNA polymerase subunit B''	K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
D      Hrr1229_006410 DNA-directed RNA polymerase subunit A'	K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D      Hrr1229_006415 rpoA2; DNA-directed RNA polymerase subunit A''	K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D      Hrr1229_013045 DNA-directed RNA polymerase subunit D	K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D      Hrr1229_003195 DNA-directed RNA polymerase subunit L	K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D      Hrr1229_008995 DNA-directed RNA polymerase	K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D      Hrr1229_009540 RNA polymerase Rpb4 family protein	K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D      Hrr1229_006395 DNA-directed RNA polymerase subunit H	K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D      Hrr1229_013075 DNA-directed RNA polymerase subunit K	K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D      Hrr1229_013070 DNA-directed RNA polymerase subunit N	K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D      Hrr1229_002900 DNA-directed RNA polymerase subunit P	K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C    03022 Basal transcription factors [PATH:halq03022]
D      Hrr1229_003085 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_004815 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_006565 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_008100 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_014200 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_014280 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_015205 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_016380 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_016585 transcription initiation factor IIB 2	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_017180 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_007430 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_014130 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_011745 transcription factor	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D      Hrr1229_014075 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_017150 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_000605 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_007420 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:halq03010]
D      Hrr1229_013085 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      Hrr1229_008690 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      Hrr1229_013035 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      Hrr1229_008760 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      Hrr1229_006435 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      Hrr1229_008735 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      Hrr1229_013065 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      Hrr1229_006135 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      Hrr1229_013040 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      Hrr1229_006430 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      Hrr1229_013030 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      Hrr1229_008730 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      Hrr1229_003170 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      Hrr1229_008705 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      Hrr1229_008680 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      Hrr1229_003185 30S ribosomal protein S3ae	K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D      Hrr1229_008720 30S ribosomal protein S4e	K02987 RP-S4e; small subunit ribosomal protein S4e
D      Hrr1229_011390 30S ribosomal protein S6e	K02991 RP-S6e; small subunit ribosomal protein S6e
D      Hrr1229_010040 30S ribosomal protein S8e	K02995 RP-S8e; small subunit ribosomal protein S8e
D      Hrr1229_009060 30S ribosomal protein S17e	K02962 RP-S17e; small subunit ribosomal protein S17e
D      Hrr1229_009250 30S ribosomal protein S19e	K02966 RP-S19e; small subunit ribosomal protein S19e
D      Hrr1229_008975 rps24e; 30S ribosomal protein S24e	K02974 RP-S24e; small subunit ribosomal protein S24e
D      Hrr1229_000130 30S ribosomal protein S27e	K02978 RP-S27e; small subunit ribosomal protein S27e
D      Hrr1229_012360 30S ribosomal protein S28e	K02979 RP-S28e; small subunit ribosomal protein S28e
D      Hrr1229_007930 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      Hrr1229_008675 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      Hrr1229_008660 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      Hrr1229_008725 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      Hrr1229_008740 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      Hrr1229_007935 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      Hrr1229_012290 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      Hrr1229_007940 50S ribosomal protein P1	K02869 RP-L12; large subunit ribosomal protein L12
D      Hrr1229_013060 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      Hrr1229_008710 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      Hrr1229_008770 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      Hrr1229_008755 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      Hrr1229_008685 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      Hrr1229_008670 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      Hrr1229_008715 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      Hrr1229_008695 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      Hrr1229_008765 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      Hrr1229_008665 50S ribosomal protein L4	K02930 RP-L4e; large subunit ribosomal protein L4e
D      Hrr1229_012365 50S ribosomal protein L7ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      Hrr1229_006610 50S ribosomal protein L16	K02866 RP-L10e; large subunit ribosomal protein L10e
D      Hrr1229_004475 50S ribosomal protein L15e	K02877 RP-L15e; large subunit ribosomal protein L15e
D      Hrr1229_013055 50S ribosomal protein L18e	K02883 RP-L18e; large subunit ribosomal protein L18e
D      Hrr1229_008750 50S ribosomal protein L19e	K02885 RP-L19e; large subunit ribosomal protein L19e
D      Hrr1229_009535 50S ribosomal protein L21e	K02889 RP-L21e; large subunit ribosomal protein L21e
D      Hrr1229_012355 50S ribosomal protein L24e	K02896 RP-L24e; large subunit ribosomal protein L24e
D      Hrr1229_000550 50S ribosomal protein L31e	K02910 RP-L31e; large subunit ribosomal protein L31e
D      Hrr1229_008745 50S ribosomal protein L32e	K02912 RP-L32e; large subunit ribosomal protein L32e
D      Hrr1229_012200 50S ribosomal protein L37e	K02922 RP-L37e; large subunit ribosomal protein L37e
D      Hrr1229_002895 50S ribosomal protein L37ae	K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D      Hrr1229_000545 50S ribosomal protein L39e	K02924 RP-L39e; large subunit ribosomal protein L39e
D      Hrr1229_004900 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      Hrr1229_000125 50S ribosomal protein L44e	K02929 RP-L44e; large subunit ribosomal protein L44e
D      Hrr1229_000560 50S ribosomal protein L18a	K02944 RP-LX; large subunit ribosomal protein LX
D      Hrr1229_006815 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Hrr1229_006805 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Hrr1229_006800 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
C    00970 Aminoacyl-tRNA biosynthesis [PATH:halq00970]
D      Hrr1229_005850 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_006810 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_014140 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_002620 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_008255 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_002245 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_006365 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_015800 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_010195 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_001570 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_004640 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      Hrr1229_001535 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006385 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006390 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006795 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      Hrr1229_003975 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Hrr1229_013960 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_001550 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_010530 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_013905 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_008635 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_009990 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_000790 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_012745 tRNA-His	K14226 tRNA-His; tRNA His
D      Hrr1229_014480 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      Hrr1229_011710 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_000955 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_007585 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_013050 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_014375 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_015730 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Hrr1229_007235 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Hrr1229_000585 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_001555 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_010500 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_004630 tRNA-Ile	K14230 tRNA-Met; tRNA Met
D      Hrr1229_006625 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      Hrr1229_013330 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_013000 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_006620 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_011495 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_013025 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_004460 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_011110 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_004115 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_000210 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Hrr1229_009975 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Hrr1229_016085 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      Hrr1229_013720 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      Hrr1229_012455 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_012485 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_008020 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_009180 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Hrr1229_000505 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_004400 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_000510 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_011855 gatD; Glu-tRNA(Gln) amidotransferase subunit GatD	K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D      Hrr1229_014380 gatE; Glu-tRNA(Gln) amidotransferase subunit GatE	K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D      Hrr1229_002690 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_008395 hypothetical protein	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_004890 glyS; glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Hrr1229_015780 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Hrr1229_012055 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Hrr1229_005450 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Hrr1229_002845 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Hrr1229_006835 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Hrr1229_004985 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Hrr1229_002295 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Hrr1229_008950 lysine--tRNA ligase	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      Hrr1229_006060 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Hrr1229_000235 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Hrr1229_009615 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Hrr1229_008295 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Hrr1229_008290 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Hrr1229_008360 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Hrr1229_011635 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:halq03060]
D      Hrr1229_008775 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      Hrr1229_010025 preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      Hrr1229_010020 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      Hrr1229_003855 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Hrr1229_000570 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Hrr1229_002360 protein translocase SEC61 complex subunit gamma	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      Hrr1229_002695 signal recognition particle protein Srp19	K03105 SRP19; signal recognition particle subunit SRP19
D      Hrr1229_003420 TRC40/GET3/ArsA family transport-energizing ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_007110 ArsA family ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_002250 twin-arginine translocase TatA/TatE family subunit	K03116 tatA; sec-independent protein translocase protein TatA
D      Hrr1229_007335 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      Hrr1229_007340 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      Hrr1229_003990 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_006285 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_006915 S26 family signal peptidase	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_014690 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_015540 S26 family signal peptidase	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:halq04122]
D      Hrr1229_013695 sulfurtransferase	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_015465 rhodanese	K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D      Hrr1229_010900 sulfurtransferase TusA family protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Hrr1229_010920 sulfurtransferase TusA family protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Hrr1229_008940 molybdopterin synthase	K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D      Hrr1229_010240 moaA; GTP 3',8-cyclase MoaA	K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D      Hrr1229_012225 MoaD/ThiS family protein	K03636 moaD; sulfur-carrier protein
D      Hrr1229_014025 MoaD/ThiS family protein	K03636 moaD; sulfur-carrier protein
D      Hrr1229_015435 MoaD/ThiS family protein	K03636 moaD; sulfur-carrier protein
D      Hrr1229_015555 moaC; cyclic pyranopterin monophosphate synthase MoaC	K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D      Hrr1229_011565 molybdenum cofactor biosynthesis protein MoaB	K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D      Hrr1229_004405 MoaD/ThiS family protein	K03154 thiS; sulfur carrier protein
C    03050 Proteasome [PATH:halq03050]
D      Hrr1229_005985 proteasome-activating nucleotidase	K03420 psmR; proteasome regulatory subunit
D      Hrr1229_009765 proteasome-activating nucleotidase	K03420 psmR; proteasome regulatory subunit
D      Hrr1229_002155 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_011265 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_003135 psmB; archaeal proteasome endopeptidase complex subunit beta	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C    03018 RNA degradation [PATH:halq03018]
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_005580 VacB/RNase II family 3'-5' exoribonuclease	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      Hrr1229_012190 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      Hrr1229_003445 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:halq03030]
D      Hrr1229_011880 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      Hrr1229_004820 ribonuclease HI family protein	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      Hrr1229_010650 ribonuclease HI family protein	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      Hrr1229_010035 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Hrr1229_006025 Hint domain-containing protein	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      Hrr1229_017570 type B DNA-directed DNA polymerase	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      Hrr1229_006910 DNA-directed DNA polymerase II small subunit	K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D      Hrr1229_006175 DNA-directed DNA polymerase II large subunit	K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D      Hrr1229_008335 ATPase	K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D      Hrr1229_009345 priS; DNA primase small subunit PriS	K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D      Hrr1229_007960 DNA primase	K18882 priL; DNA primase large subunit
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_004590 replication factor C small subunit	K04801 rfcS; replication factor C small subunit
D      Hrr1229_007980 AAA family ATPase	K04801 rfcS; replication factor C small subunit
D      Hrr1229_012790 replication factor C large subunit	K04800 rfcL; replication factor C large subunit
D      Hrr1229_011780 AAA family ATPase	K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C    03410 Base excision repair [PATH:halq03410]
D      Hrr1229_014180 DNA-3-methyladenine glycosylase 2 family protein	K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_000940 endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_001785 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_009960 A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      Hrr1229_012705 DNA-3-methyladenine glycosylase 2 family protein	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      Hrr1229_003145 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_005035 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_012245 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_003765 deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      Hrr1229_007825 DHH family phosphoesterase	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:halq03420]
D      Hrr1229_007330 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      Hrr1229_007480 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      Hrr1229_007035 excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      Hrr1229_005895 ATP-dependent helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Hrr1229_014075 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_017150 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_000605 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_007420 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
C    03430 Mismatch repair [PATH:halq03430]
D      Hrr1229_006330 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      Hrr1229_010475 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      Hrr1229_007320 endonuclease MutS2	K07456 mutS2; DNA mismatch repair protein MutS2
D      Hrr1229_014255 DNA mismatch repair protein	K07456 mutS2; DNA mismatch repair protein MutS2
D      Hrr1229_003240 mutL; DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      Hrr1229_010480 DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      Hrr1229_005895 ATP-dependent helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Hrr1229_016465 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Hrr1229_017015 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Hrr1229_016460 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Hrr1229_017020 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Hrr1229_007825 DHH family phosphoesterase	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Hrr1229_008225 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_012640 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
C    03440 Homologous recombination [PATH:halq03440]
D      Hrr1229_007825 DHH family phosphoesterase	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
C    03450 Non-homologous end-joining
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1 [PATH:halq03250]
D      Hrr1229_013940 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Hrr1229_008990 DNA-directed RNA polymerase, subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      Hrr1229_002355 transcription elongation factor Spt5	K15172 SUPT5H; transcription elongation factor SPT5
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus and Lyssavirus
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:halq02010]
D      Hrr1229_010225 substrate-binding domain-containing protein	K05772 tupA; tungstate transport system substrate-binding protein
D      Hrr1229_012140 substrate-binding domain-containing protein	K05772 tupA; tungstate transport system substrate-binding protein
D      Hrr1229_012145 ABC transporter permease	K05773 tupB; tungstate transport system permease protein
D      Hrr1229_012150 phosphate ABC transporter ATP-binding protein	K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D      Hrr1229_017745 extracellular solute-binding protein	K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D      Hrr1229_017750 ABC transporter permease subunit	K15496 wtpB; molybdate/tungstate transport system permease protein
D      Hrr1229_017755 ABC transporter ATP-binding protein	K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D      Hrr1229_001935 aliphatic sulfonate ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011810 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011815 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001940 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001945 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_011820 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_009590 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_006110 extracellular solute-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      Hrr1229_000830 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_001515 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_006080 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_000825 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_001510 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_004050 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_007185 thiamine ABC transporter substrate-binding protein	K02064 thiB; thiamine transport system substrate-binding protein
D      Hrr1229_007190 iron ABC transporter permease	K02063 thiP; thiamine transport system permease protein
D      Hrr1229_007195 ABC transporter ATP-binding protein	K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D      Hrr1229_003245 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_008000 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_008435 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_017455 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_003250 extracellular solute-binding protein	K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D      Hrr1229_003255 sugar ABC transporter permease	K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Hrr1229_003260 ABC transporter permease subunit	K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Hrr1229_008450 extracellular solute-binding protein	K10236 thuE; trehalose/maltose transport system substrate-binding protein
D      Hrr1229_008445 sugar ABC transporter permease	K10237 thuF; trehalose/maltose transport system permease protein
D      Hrr1229_008440 carbohydrate ABC transporter permease	K10238 thuG; trehalose/maltose transport system permease protein
D      Hrr1229_001910 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      Hrr1229_014965 BMP family protein	K07335 bmpA; basic membrane protein A and related proteins
D      Hrr1229_001900 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      Hrr1229_014975 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      Hrr1229_001895 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      Hrr1229_014980 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      Hrr1229_001905 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      Hrr1229_014970 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      Hrr1229_007985 carbohydrate ABC transporter substrate-binding protein	K17315 gtsA; glucose/mannose transport system substrate-binding protein
D      Hrr1229_007990 sugar ABC transporter permease	K17316 gtsB; glucose/mannose transport system permease protein
D      Hrr1229_007995 carbohydrate ABC transporter permease	K17317 gtsC; glucose/mannose transport system permease protein
D      Hrr1229_004190 PstS family phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_010610 substrate-binding domain-containing protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_004195 pstC; phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      Hrr1229_010615 pstC; phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      Hrr1229_004200 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      Hrr1229_010620 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      Hrr1229_004205 pstB; phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Hrr1229_010625 pstB; phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Hrr1229_000365 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010540 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_013980 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010560 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_011935 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_000360 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_013995 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_010565 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_011930 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_014000 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_000355 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_010570 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000350 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013985 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011925 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_010575 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000345 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013990 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011920 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000020 metal ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      Hrr1229_002055 zinc ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      Hrr1229_002045 metal ABC transporter permease	K09816 znuB; zinc transport system permease protein
D      Hrr1229_000015 metal ABC transporter ATP-binding protein	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Hrr1229_002050 metal ABC transporter ATP-binding protein	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Hrr1229_004155 biotin transporter BioY	K03523 bioY; biotin transport system substrate-specific component
D      Hrr1229_004165 energy-coupling factor transporter transmembrane protein EcfT	K16783 bioN; biotin transport system permease protein
D      Hrr1229_004160 ABC transporter ATP-binding protein	K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D      Hrr1229_000410 ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      Hrr1229_013805 copper ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      Hrr1229_013815 right-handed parallel beta-helix repeat-containing protein	K07218 nosD; nitrous oxidase accessory protein
D      Hrr1229_000415 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
D      Hrr1229_013810 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
C    02060 Phosphotransferase system (PTS) [PATH:halq02060]
D      Hrr1229_014440 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      Hrr1229_014435 HPr family phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
C    03070 Bacterial secretion system [PATH:halq03070]
D      Hrr1229_010025 preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      Hrr1229_010020 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      Hrr1229_008775 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      Hrr1229_000570 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Hrr1229_003855 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Hrr1229_002250 twin-arginine translocase TatA/TatE family subunit	K03116 tatA; sec-independent protein translocase protein TatA
D      Hrr1229_007335 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      Hrr1229_007340 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:halq02020]
D      Hrr1229_004190 PstS family phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_010610 substrate-binding domain-containing protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_010790 tripartite tricarboxylate transporter permease	K07793 tctA; putative tricarboxylic transport membrane protein
D      Hrr1229_008645 hypothetical protein	K07794 tctB; putative tricarboxylic transport membrane protein
D      Hrr1229_012755 cytochrome oxidase assembly	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Hrr1229_008425 glycoside hydrolase family 68 protein	K00692 sacB; levansucrase [EC:2.4.1.10]
D      Hrr1229_000665 CoA ester lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Hrr1229_004975 CoA ester lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Hrr1229_005160 CoA ester lyase	K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D      Hrr1229_009050 triphosphoribosyl-dephospho-CoA synthase	K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D      Hrr1229_015160 molybdopterin-dependent oxidoreductase	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_015155 respiratory nitrate reductase subunit beta	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_009470 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      Hrr1229_004425 extracellular solute-binding protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_005045 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_006505 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_007030 PAS domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_009650 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_013660 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_009455 purine-binding chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      Hrr1229_009465 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      Hrr1229_002800 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_007755 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_009460 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis
D      Hrr1229_002490 rocF; arginase	K01476 rocF; arginase [EC:3.5.3.1]
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:halq02024]
D      Hrr1229_003585 anthranilate synthase component I family protein	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_011575 trpE; anthranilate synthase component I	K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D      Hrr1229_003590 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      Hrr1229_011570 aminodeoxychorismate/anthranilate synthase component II	K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D      Hrr1229_000365 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010540 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_013980 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010560 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_011935 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_000360 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_013995 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_010565 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_011930 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_014000 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_000355 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_010570 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000350 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013985 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011925 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_010575 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000345 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013990 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011920 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011120 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Hrr1229_003485 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_005145 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_005370 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_006255 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_011945 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_003480 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_004935 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_005140 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_005365 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_011950 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_003475 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_004940 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_005135 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_005360 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_011955 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_003470 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_004945 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_004965 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005150 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005355 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_011960 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_003465 ATP-binding cassette domain-containing protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005350 ATP-binding cassette domain-containing protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_011965 ABC transporter ATP-binding protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_008775 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      Hrr1229_000570 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Hrr1229_003855 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis [PATH:halq02030]
D      Hrr1229_004425 extracellular solute-binding protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_005045 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_006505 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_007030 PAS domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_009650 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_013660 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_009465 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      Hrr1229_009455 purine-binding chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      Hrr1229_002800 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_007755 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_007750 chemotaxis protein CheC	K03410 cheC; chemotaxis protein CheC
D      Hrr1229_009460 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      Hrr1229_007745 chemotaxis protein CheD	K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D      Hrr1229_009470 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C    02040 Flagellar assembly
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism [PATH:halq04980]
D      Hrr1229_012475 cob(I)yrinic acid a,c-diamide adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D      Hrr1229_004235 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB	K07588 MMAA; GTPase [EC:3.6.5.-]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance
C    01502 Vancomycin resistance
C    01503 Cationic antimicrobial peptide (CAMP) resistance
D      Hrr1229_013940 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:halq01000]
C    01001 Protein kinases [BR:halq01001]
D      Hrr1229_008970 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase	K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1]
D      Hrr1229_007255 serine protein kinase RIO	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      Hrr1229_003755 serine/threonine protein phosphatase	K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D      Hrr1229_008045 sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_012785 HAMP domain-containing histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_014170 GAF domain-containing sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_009465 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C    01009 Protein phosphatases and associated proteins [BR:halq01009]
D      Hrr1229_000590 translation initiation factor IF-2 subunit beta	K03238 EIF2S2; translation initiation factor 2 subunit 2
D      Hrr1229_006600 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Hrr1229_007005 serB; phosphoserine phosphatase SerB	K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C    01002 Peptidases and inhibitors [BR:halq01002]
D      Hrr1229_011875 prepilin peptidase	K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D      Hrr1229_002675 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_002930 GMP synthase subunit A	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_007605 guaA; glutamine-hydrolyzing GMP synthase subunit GuaA	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_015575 type 1 glutamine amidotransferase	K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D      Hrr1229_014355 purF; amidophosphoribosyltransferase	K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D      Hrr1229_002420 gltB; glutamate synthase large subunit	K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D      Hrr1229_001600 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing)	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      Hrr1229_003150 asparagine synthetase B	K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D      Hrr1229_009575 DJ-1/PfpI family protein	K05520 yhbO; deglycase [EC:3.5.1.124]
D      Hrr1229_002350 artA; archaeosortase A	K24447 artA; archaeosortase A [EC:3.4.22.-]
D      Hrr1229_000910 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      Hrr1229_008550 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      Hrr1229_009665 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      Hrr1229_016535 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      Hrr1229_016925 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      Hrr1229_008270 pepF; oligoendopeptidase F	K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D      Hrr1229_010925 ArgE/DapE family deacylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Hrr1229_003495 M20/M25/M40 family metallo-hydrolase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      Hrr1229_001010 amidohydrolase	K12940 abgA; aminobenzoyl-glutamate utilization protein A
D      Hrr1229_001045 amidohydrolase	K12940 abgA; aminobenzoyl-glutamate utilization protein A
D      Hrr1229_015010 amidohydrolase	K12940 abgA; aminobenzoyl-glutamate utilization protein A
D      Hrr1229_012160 type II methionyl aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      Hrr1229_000595 aminopeptidase P family protein	K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D      Hrr1229_005900 aminopeptidase P family protein	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      Hrr1229_015200 aminopeptidase P family protein	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      Hrr1229_012320 M28 family peptidase	K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D      Hrr1229_008280 aminopeptidase	K19689 ampS; aminopeptidase [EC:3.4.11.-]
D      Hrr1229_009780 aminopeptidase	K19689 ampS; aminopeptidase [EC:3.4.11.-]
D      Hrr1229_015360 carboxypeptidase M32	K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D      Hrr1229_002610 M42 family metallopeptidase	K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D      Hrr1229_001685 M48 family metalloprotease	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      Hrr1229_007705 htpX; zinc metalloprotease HtpX	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      Hrr1229_004615 archaemetzincin family Zn-dependent metalloprotease	K06974 amzA; archaemetzincin [EC:3.4.-.-]
D      Hrr1229_015415 M67 family metallopeptidase	K20110 JAMM1; desampylase [EC:3.4.19.15]
D      Hrr1229_006700 PrsW family intramembrane metalloprotease	K24131 prsW; protease PrsW [EC:3.4.-.-]
D      Hrr1229_000905 lonB; ATP-dependent protease LonB	K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D      Hrr1229_003990 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_006285 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_006915 S26 family signal peptidase	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_014690 signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_015540 S26 family signal peptidase	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      Hrr1229_001795 alpha/beta hydrolase	K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-]
D      Hrr1229_012580 penicillin acylase family protein	K01434 pac; penicillin G amidase [EC:3.5.1.11]
D      Hrr1229_003560 sppA; signal peptide peptidase SppA	K04773 sppA; protease IV [EC:3.4.21.-]
D      Hrr1229_012565 S49 family peptidase	K04773 sppA; protease IV [EC:3.4.21.-]
D      Hrr1229_003075 rhomboid family intramembrane serine protease	K07059 K07059; rhomboid family protein
D      Hrr1229_002155 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_011265 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_003135 psmB; archaeal proteasome endopeptidase complex subunit beta	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D      Hrr1229_009035 isoaspartyl peptidase/L-asparaginase	K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D      Hrr1229_011940 ggt; gamma-glutamyltransferase	K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C    01003 Glycosyltransferases [BR:halq01003]
D      Hrr1229_002790 aglJ; S-layer glycoprotein N-glycosyltransferase AglJ	K23684 aglJ; dolichol-phosphate hexosyltransferase [EC:2.4.1.-]
D      Hrr1229_001120 glycosyltransferase family 2 protein	K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356]
D      Hrr1229_006120 flippase-like domain-containing protein	K23683 aglD; glycosyltransferase AglD [EC:2.4.1.-]
D      Hrr1229_001115 oligosaccharyl transferase, archaeosortase A system-associated	K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D      Hrr1229_001220 hypothetical protein	K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D      Hrr1229_015590 glycosyltransferase family 4 protein	K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D      Hrr1229_003200 glycosyltransferase family 4 protein	K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D      Hrr1229_008425 glycoside hydrolase family 68 protein	K00692 sacB; levansucrase [EC:2.4.1.10]
C    01005 Lipopolysaccharide biosynthesis proteins [BR:halq01005]
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:halq01011]
D      Hrr1229_001235 undecaprenyl-diphosphate phosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      Hrr1229_002350 artA; archaeosortase A	K24447 artA; archaeosortase A [EC:3.4.22.-]
C    01004 Lipid biosynthesis proteins [BR:halq01004]
D      Hrr1229_014005 3-oxoacyl-ACP synthase	K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D      Hrr1229_002680 glucose 1-dehydrogenase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_007665 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_009845 SDR family oxidoreductase	K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D      Hrr1229_002260 AMP-binding protein	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015325 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_015340 acs; acetate--CoA ligase	K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D      Hrr1229_004770 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_004950 acetate--CoA ligase family protein	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      Hrr1229_011120 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Hrr1229_013970 AMP-binding protein	K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
C    01008 Polyketide biosynthesis proteins
C    01006 Prenyltransferases [BR:halq01006]
D      Hrr1229_005340 polyprenyl synthetase family protein	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Hrr1229_012185 polyprenyl synthetase family protein	K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D      Hrr1229_010000 undecaprenyl diphosphate synthase family protein	K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D      Hrr1229_016115 squalene/phytoene synthase family protein	K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D      Hrr1229_008490 phytoene/squalene synthase family protein	K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D      Hrr1229_000480 1,4-dihydroxy-2-naphthoate polyprenyltransferase	K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D      Hrr1229_009125 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
C    01007 Amino acid related enzymes [BR:halq01007]
D      Hrr1229_008950 lysine--tRNA ligase	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      Hrr1229_009180 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Hrr1229_008360 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Hrr1229_011635 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      Hrr1229_005450 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Hrr1229_006060 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Hrr1229_002845 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Hrr1229_002295 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Hrr1229_006835 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Hrr1229_004985 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Hrr1229_009615 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Hrr1229_004890 glyS; glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Hrr1229_012055 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Hrr1229_000235 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Hrr1229_015780 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Hrr1229_002690 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_008395 hypothetical protein	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_008295 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Hrr1229_008290 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Hrr1229_000525 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_002635 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_003790 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_014605 pyridoxal phosphate-dependent aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      Hrr1229_015240 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	K10907 K10907; aminotransferase [EC:2.6.1.-]
D      Hrr1229_015115 histidinol-phosphate transaminase	K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D      Hrr1229_007360 aspartate aminotransferase family protein	K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D      Hrr1229_001030 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_009360 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D      Hrr1229_000970 aspartate aminotransferase family protein	K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D      Hrr1229_007395 glutamate-1-semialdehyde 2,1-aminomutase	K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D      Hrr1229_003595 aminotransferase class IV	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_005865 branched-chain amino acid transaminase	K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D      Hrr1229_015775 alanine--glyoxylate aminotransferase family protein	K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C    00199 Cytochrome P450
C    00194 Photosynthesis proteins [BR:halq00194]
D      Hrr1229_000470 halocyanin domain-containing protein	K02638 petE; plastocyanin
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:halq03000]
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
D      Hrr1229_010220 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_015890 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_016030 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_007430 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_014130 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_000085 Lrp/AsnC family transcriptional regulator	K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D      Hrr1229_002305 Lrp/AsnC family transcriptional regulator	K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D      Hrr1229_011615 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_014390 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_016700 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_016800 winged helix-turn-helix transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_017945 winged helix-turn-helix transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_010755 IclR family transcriptional regulator	K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D      Hrr1229_010845 IclR family transcriptional regulator	K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D      Hrr1229_017395 IclR family transcriptional regulator	K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D      Hrr1229_009255 winged helix-turn-helix transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      Hrr1229_018070 helix-turn-helix transcriptional regulator	K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D      Hrr1229_010210 winged helix-turn-helix transcriptional regulator	K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D      Hrr1229_010165 ArsR family transcriptional regulator	K07721 K07721; ArsR family transcriptional regulator
D      Hrr1229_002855 helix-turn-helix domain-containing protein	K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D      Hrr1229_003400 metal-dependent transcriptional regulator	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D      Hrr1229_006050 metal-dependent transcriptional regulator	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D      Hrr1229_016475 metal-dependent transcriptional regulator	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D      Hrr1229_016500 metal-dependent transcriptional regulator	K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D      Hrr1229_014410 biotin--[acetyl-CoA-carboxylase] ligase	K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D      Hrr1229_011020 MarR family transcriptional regulator	K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D      Hrr1229_003710 TrmB family transcriptional regulator	K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D      Hrr1229_008430 TrmB family transcriptional regulator	K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D      Hrr1229_009525 TrmB family transcriptional regulator	K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D      Hrr1229_014090 TrmB family transcriptional regulator	K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D      Hrr1229_003120 helix-turn-helix domain-containing protein	K06930 bat; HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
D      Hrr1229_010665 GAF domain-containing protein	K06930 bat; HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
D      Hrr1229_010695 PAS domain S-box protein	K06930 bat; HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
D      Hrr1229_015330 helix-turn-helix domain-containing protein	K06930 bat; HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
D      Hrr1229_012005 helix-turn-helix domain-containing protein	K23348 dmsR; HTH-type transcriptional regulator, dimethyl sulfoxide reductase transcription regulator
D      Hrr1229_017720 helix-turn-helix domain-containing protein	K23348 dmsR; HTH-type transcriptional regulator, dimethyl sulfoxide reductase transcription regulator
D      Hrr1229_017730 helix-turn-helix domain-containing protein	K23348 dmsR; HTH-type transcriptional regulator, dimethyl sulfoxide reductase transcription regulator
D      Hrr1229_007875 Tfx family DNA-binding protein	K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D      Hrr1229_000695 orotate phosphoribosyltransferase-like protein	K26599 gfcR; HTH-type transcriptional regulator, activator of D-glucose/D-fructose catabolism
D      Hrr1229_012135 TOBE domain-containing protein	K02019 modE; molybdate transport system regulatory protein
D      Hrr1229_005525 transcriptional regulator	K07728 K07728; putative transcriptional regulator
D      Hrr1229_015640 MarR family transcriptional regulator	K07730 K07730; putative transcriptional regulator
D      Hrr1229_010060 helix-turn-helix domain-containing protein	K07731 K07731; putative transcriptional regulator
D      Hrr1229_010070 ribbon-helix-helix protein, CopG family	K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D      Hrr1229_012085 CopG family ribbon-helix-helix protein	K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C    03021 Transcription machinery [BR:halq03021]
D      Hrr1229_003085 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_004815 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_006565 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_008100 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_014200 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_014280 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_015205 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_016380 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_016585 transcription initiation factor IIB 2	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_017180 transcription initiation factor IIB family protein	K03124 TFIIB; transcription initiation factor TFIIB
D      Hrr1229_007430 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_014130 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      Hrr1229_011745 transcription factor	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D      Hrr1229_014075 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_017150 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_000605 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_007420 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_008990 DNA-directed RNA polymerase, subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      Hrr1229_002355 transcription elongation factor Spt5	K15172 SUPT5H; transcription elongation factor SPT5
D      Hrr1229_006420 NusA-like transcription termination signal-binding factor	K02600 nusA; transcription termination/antitermination protein NusA
D      Hrr1229_006410 DNA-directed RNA polymerase subunit A'	K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D      Hrr1229_006415 rpoA2; DNA-directed RNA polymerase subunit A''	K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D      Hrr1229_006405 rpoB; DNA-directed RNA polymerase subunit B	K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
D      Hrr1229_006400 DNA-directed RNA polymerase subunit B''	K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
D      Hrr1229_013045 DNA-directed RNA polymerase subunit D	K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D      Hrr1229_008995 DNA-directed RNA polymerase	K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D      Hrr1229_009540 RNA polymerase Rpb4 family protein	K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D      Hrr1229_006395 DNA-directed RNA polymerase subunit H	K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D      Hrr1229_013075 DNA-directed RNA polymerase subunit K	K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D      Hrr1229_003195 DNA-directed RNA polymerase subunit L	K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D      Hrr1229_013070 DNA-directed RNA polymerase subunit N	K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D      Hrr1229_002900 DNA-directed RNA polymerase subunit P	K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D      Hrr1229_002190 transcription factor S	K03057 tfs; transcription factor S
D      Hrr1229_009940 transcription factor S	K03057 tfs; transcription factor S
C    03019 Messenger RNA biogenesis [BR:halq03019]
D      Hrr1229_008990 DNA-directed RNA polymerase, subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      Hrr1229_002355 transcription elongation factor Spt5	K15172 SUPT5H; transcription elongation factor SPT5
D      Hrr1229_013850 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_008900 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_009870 mRNA surveillance protein pelota	K06965 PELO; protein pelota
D      Hrr1229_006055 peptide chain release factor aRF-1	K03265 ETF1; peptide chain release factor subunit 1
D      Hrr1229_006140 tuf; translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006575 GTP-binding protein	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_012190 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      Hrr1229_005580 VacB/RNase II family 3'-5' exoribonuclease	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_003445 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      Hrr1229_006615 DEAD/DEAH box helicase	K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-]
C    03041 Spliceosome
C    03011 Ribosome [BR:halq03011]
D      Hrr1229_003185 30S ribosomal protein S3ae	K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D      Hrr1229_008720 30S ribosomal protein S4e	K02987 RP-S4e; small subunit ribosomal protein S4e
D      Hrr1229_011390 30S ribosomal protein S6e	K02991 RP-S6e; small subunit ribosomal protein S6e
D      Hrr1229_010040 30S ribosomal protein S8e	K02995 RP-S8e; small subunit ribosomal protein S8e
D      Hrr1229_009060 30S ribosomal protein S17e	K02962 RP-S17e; small subunit ribosomal protein S17e
D      Hrr1229_009250 30S ribosomal protein S19e	K02966 RP-S19e; small subunit ribosomal protein S19e
D      Hrr1229_008975 rps24e; 30S ribosomal protein S24e	K02974 RP-S24e; small subunit ribosomal protein S24e
D      Hrr1229_000130 30S ribosomal protein S27e	K02978 RP-S27e; small subunit ribosomal protein S27e
D      Hrr1229_012360 30S ribosomal protein S28e	K02979 RP-S28e; small subunit ribosomal protein S28e
D      Hrr1229_008665 50S ribosomal protein L4	K02930 RP-L4e; large subunit ribosomal protein L4e
D      Hrr1229_012365 50S ribosomal protein L7ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      Hrr1229_006610 50S ribosomal protein L16	K02866 RP-L10e; large subunit ribosomal protein L10e
D      Hrr1229_004475 50S ribosomal protein L15e	K02877 RP-L15e; large subunit ribosomal protein L15e
D      Hrr1229_013055 50S ribosomal protein L18e	K02883 RP-L18e; large subunit ribosomal protein L18e
D      Hrr1229_008750 50S ribosomal protein L19e	K02885 RP-L19e; large subunit ribosomal protein L19e
D      Hrr1229_009535 50S ribosomal protein L21e	K02889 RP-L21e; large subunit ribosomal protein L21e
D      Hrr1229_012355 50S ribosomal protein L24e	K02896 RP-L24e; large subunit ribosomal protein L24e
D      Hrr1229_000550 50S ribosomal protein L31e	K02910 RP-L31e; large subunit ribosomal protein L31e
D      Hrr1229_008745 50S ribosomal protein L32e	K02912 RP-L32e; large subunit ribosomal protein L32e
D      Hrr1229_012200 50S ribosomal protein L37e	K02922 RP-L37e; large subunit ribosomal protein L37e
D      Hrr1229_002895 50S ribosomal protein L37ae	K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D      Hrr1229_000545 50S ribosomal protein L39e	K02924 RP-L39e; large subunit ribosomal protein L39e
D      Hrr1229_004900 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      Hrr1229_000125 50S ribosomal protein L44e	K02929 RP-L44e; large subunit ribosomal protein L44e
D      Hrr1229_013085 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      Hrr1229_008690 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      Hrr1229_013035 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      Hrr1229_008760 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      Hrr1229_006435 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      Hrr1229_008735 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      Hrr1229_013065 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      Hrr1229_006135 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      Hrr1229_013040 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      Hrr1229_006430 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      Hrr1229_013030 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      Hrr1229_008730 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      Hrr1229_003170 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      Hrr1229_008705 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      Hrr1229_008680 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      Hrr1229_007930 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      Hrr1229_008675 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      Hrr1229_008660 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      Hrr1229_008725 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      Hrr1229_008740 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      Hrr1229_007935 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      Hrr1229_012290 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      Hrr1229_013060 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      Hrr1229_008710 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      Hrr1229_008770 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      Hrr1229_008755 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      Hrr1229_008685 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      Hrr1229_008670 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      Hrr1229_008715 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      Hrr1229_008695 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      Hrr1229_008765 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      Hrr1229_007940 50S ribosomal protein P1	K02869 RP-L12; large subunit ribosomal protein L12
D      Hrr1229_000560 50S ribosomal protein L18a	K02944 RP-LX; large subunit ribosomal protein LX
D      Hrr1229_006800 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
D      Hrr1229_006815 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Hrr1229_006805 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
C    03009 Ribosome biogenesis [BR:halq03009]
D      Hrr1229_000925 NOP58 family protein	K14564 NOP56; nucleolar protein 56
D      Hrr1229_013005 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5	K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D      Hrr1229_000140 RNA-protein complex protein Nop10	K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D      Hrr1229_007250 RNA-processing protein	K06961 KRR1; ribosomal RNA assembly protein
D      Hrr1229_007255 serine protein kinase RIO	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      Hrr1229_003755 serine/threonine protein phosphatase	K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D      Hrr1229_013630 DUF367 family protein	K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D      Hrr1229_004525 ribosome biogenesis/translation initiation ATPase RLI	K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D      Hrr1229_009620 50S ribosome-binding GTPase	K06943 NOG1; nucleolar GTP-binding protein
D      Hrr1229_008700 ribonuclease P protein component 1	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      Hrr1229_002150 ribonuclease P	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      Hrr1229_002140 ribonuclease P	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      Hrr1229_000555 translation initiation factor IF-6	K03264 EIF6; translation initiation factor 6
D      Hrr1229_011140 hypothetical protein	K07562 NMD3; 60S ribosomal export protein NMD3
D      Hrr1229_002065 ribosome assembly factor SBDS	K14574 SDO1; ribosome maturation protein SDO1
D      Hrr1229_013850 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_008900 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_006925 GTP-binding protein	K03595 era; GTPase
D      Hrr1229_000930 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase	K04795 flpA; fibrillarin-like pre-rRNA processing protein
D      Hrr1229_012365 50S ribosomal protein L7ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      Hrr1229_002700 H/ACA RNA-protein complex component Gar1	K07569 gar1; RNA-binding protein
D      Hrr1229_006420 NusA-like transcription termination signal-binding factor	K02600 nusA; transcription termination/antitermination protein NusA
D      Hrr1229_010145 16S ribosomal RNA methyltransferase A	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      Hrr1229_004420 TRAM domain-containing protein	K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D      Hrr1229_008265 rimI; ribosomal protein S18-alanine N-acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      Hrr1229_011215 GNAT family N-acetyltransferase	K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D      Hrr1229_008845 RimK family alpha-L-glutamate ligase	K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D      Hrr1229_009905 YcaO-like family protein	K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D      Hrr1229_017080 YcaO-like family protein	K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D      Hrr1229_015345 hflX; GTPase HflX	K03665 hflX; GTPase
D      Hrr1229_004515 threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Hrr1229_000025 YhbY family RNA-binding protein	K07574 yhbY; RNA-binding protein
D      Hrr1229_000260 redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase
D      Hrr1229_014425 redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase
D      Hrr1229_006710 DUF402 domain-containing protein	K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C    03016 Transfer RNA biogenesis [BR:halq03016]
D      Hrr1229_008700 ribonuclease P protein component 1	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      Hrr1229_002150 ribonuclease P	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      Hrr1229_002140 ribonuclease P	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      Hrr1229_001850 ribonuclease P	K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D      Hrr1229_006540 rnz; ribonuclease Z	K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D      Hrr1229_009835 RtcB family protein	K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D      Hrr1229_009825 archease	K24956 ZBTB8OS; protein archease
D      Hrr1229_006140 tuf; translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006575 GTP-binding protein	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_009180 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Hrr1229_000235 proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      Hrr1229_002295 isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      Hrr1229_004985 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Hrr1229_002845 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      Hrr1229_006060 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Hrr1229_002690 alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_008395 hypothetical protein	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      Hrr1229_004890 glyS; glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Hrr1229_015780 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      Hrr1229_012055 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      Hrr1229_005450 cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      Hrr1229_006835 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      Hrr1229_009615 histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      Hrr1229_008295 phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      Hrr1229_008290 phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      Hrr1229_008360 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Hrr1229_011635 tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      Hrr1229_002370 hypothetical protein	K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      Hrr1229_002195 alanyl-tRNA editing protein	K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D      Hrr1229_006545 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      Hrr1229_011115 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase	K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D      Hrr1229_008805 tRNA (guanine(26)-N(2))-dimethyltransferase	K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D      Hrr1229_000195 class I SAM-dependent methyltransferase family protein	K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      Hrr1229_014595 tRNA (adenine-N1)-methyltransferase	K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D      Hrr1229_000875 class I SAM-dependent methyltransferase	K15444 TRM9; tRNA (uracil-5-)-methyltransferase TRM9 [EC:2.1.1.229]
D      Hrr1229_013930 truA; tRNA pseudouridine(38-40) synthase TruA	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      Hrr1229_002935 truD; tRNA pseudouridine(13) synthase TruD	K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D      Hrr1229_011625 tRNA pseudouridine(54/55) synthase Pus10	K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D      Hrr1229_014340 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3	K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D      Hrr1229_004515 threonylcarbamoyl-AMP synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      Hrr1229_004645 CCA tRNA nucleotidyltransferase	K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D      Hrr1229_012070 endA; tRNA-intron lyase	K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D      Hrr1229_007040 thpR; RNA 2',3'-cyclic phosphodiesterase	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D      Hrr1229_008950 lysine--tRNA ligase	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      Hrr1229_013340 trmY; tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY	K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D      Hrr1229_007435 TIGR01177 family methyltransferase	K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D      Hrr1229_011765 tRNA (cytidine(56)-2'-O)-methyltransferase	K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D      Hrr1229_014325 RsmB/NOP family class I SAM-dependent RNA methyltransferase	K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D      Hrr1229_010900 sulfurtransferase TusA family protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Hrr1229_010920 sulfurtransferase TusA family protein	K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D      Hrr1229_008415 iron-sulfur cluster assembly accessory protein	K13628 iscA; iron-sulfur cluster assembly protein
D      Hrr1229_008970 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase	K15904 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32 [EC:2.3.1.234 2.7.11.1]
D      Hrr1229_007160 hypothetical protein	K09119 cgi121; KEOPS complex subunit Cgi121
D      Hrr1229_002905 KEOPS complex Pcc1-like subunit	K09741 pcc1; KEOPS complex subunit Pcc1
D      Hrr1229_004270 6-carboxytetrahydropterin synthase	K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D      Hrr1229_011360 tgtA; tRNA guanosine(15) transglycosylase TgtA	K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D      Hrr1229_005530 DUF1743 domain-containing protein	K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D      Hrr1229_009220 tRNA(Met) cytidine acetyltransferase	K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D      Hrr1229_005580 VacB/RNase II family 3'-5' exoribonuclease	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      Hrr1229_005610 type II toxin-antitoxin system VapC family toxin	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      Hrr1229_007905 PIN domain-containing protein	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C    03012 Translation factors [BR:halq03012]
D      Hrr1229_008850 eif1A; translation initiation factor eIF-1A	K03236 EIF1A; translation initiation factor 1A
D      Hrr1229_012335 eif1A; translation initiation factor eIF-1A	K03236 EIF1A; translation initiation factor 1A
D      Hrr1229_012020 yciH; stress response translation initiation inhibitor YciH	K03113 EIF1; translation initiation factor 1
D      Hrr1229_016885 translation initiation factor	K03113 EIF1; translation initiation factor 1
D      Hrr1229_018030 translation initiation factor	K03113 EIF1; translation initiation factor 1
D      Hrr1229_000135 translation initiation factor IF-2 subunit alpha	K03237 EIF2S1; translation initiation factor 2 subunit 1
D      Hrr1229_000590 translation initiation factor IF-2 subunit beta	K03238 EIF2S2; translation initiation factor 2 subunit 2
D      Hrr1229_009005 translation initiation factor IF-2 subunit gamma	K03242 EIF2S3; translation initiation factor 2 subunit 3
D      Hrr1229_009545 translation initiation factor eIF-2B	K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D      Hrr1229_013390 translation initiation factor IF-5A	K03263 EIF5A; translation initiation factor 5A
D      Hrr1229_012125 infB; translation initiation factor IF-2	K03243 EIF5B; translation initiation factor 5B
D      Hrr1229_000555 translation initiation factor IF-6	K03264 EIF6; translation initiation factor 6
D      Hrr1229_006140 tuf; translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006575 GTP-binding protein	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_009075 elongation factor 1-beta	K03232 EEF1B; elongation factor 1-beta
D      Hrr1229_006165 elongation factor EF-2	K03234 EEF2; elongation factor 2
D      Hrr1229_000620 dph2; diphthamide biosynthesis enzyme Dph2	K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D      Hrr1229_000675 diphthine--ammonia ligase	K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D      Hrr1229_006055 peptide chain release factor aRF-1	K03265 ETF1; peptide chain release factor subunit 1
D      Hrr1229_010135 methyltransferase domain-containing protein	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      Hrr1229_002940 peptidyl-tRNA hydrolase	K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C    03110 Chaperones and folding catalysts [BR:halq03110]
D      Hrr1229_003445 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      Hrr1229_004470 thermosome subunit	K22447 cct; archaeal chaperonin
D      Hrr1229_007245 thermosome subunit	K22447 cct; archaeal chaperonin
D      Hrr1229_003450 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Hrr1229_014875 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      Hrr1229_003275 Hsp20/alpha crystallin family protein	K13993 HSP20; HSP20 family protein
D      Hrr1229_004685 Hsp20/alpha crystallin family protein	K13993 HSP20; HSP20 family protein
D      Hrr1229_008840 Hsp20/alpha crystallin family protein	K13993 HSP20; HSP20 family protein
D      Hrr1229_008920 Hsp20/alpha crystallin family protein	K13993 HSP20; HSP20 family protein
D      Hrr1229_000565 pfdA; prefoldin subunit alpha	K04797 pfdA; prefoldin alpha subunit
D      Hrr1229_002910 prefoldin subunit beta	K04798 pfdB; prefoldin beta subunit
D      Hrr1229_010675 molecular chaperone TorD family protein	K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D      Hrr1229_017695 molecular chaperone TorD family protein	K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D      Hrr1229_013940 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Hrr1229_000650 peptidylprolyl isomerase	K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D      Hrr1229_004905 thioredoxin fold domain-containing protein	K03671 TXN; thioredoxin
D      Hrr1229_009080 thioredoxin family protein	K03671 TXN; thioredoxin
D      Hrr1229_009690 trxA; thioredoxin	K03671 TXN; thioredoxin
D      Hrr1229_010930 trxA; thioredoxin	K03671 TXN; thioredoxin
D      Hrr1229_016825 thioredoxin family protein	K03671 TXN; thioredoxin
D      Hrr1229_017970 thioredoxin family protein	K03671 TXN; thioredoxin
D      Hrr1229_000690 glutaredoxin	K07390 grxD; monothiol glutaredoxin
C    04131 Membrane trafficking [BR:halq04131]
D      Hrr1229_012350 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      Hrr1229_013850 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_008900 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_010030 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Hrr1229_016495 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Hrr1229_003420 TRC40/GET3/ArsA family transport-energizing ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_007110 ArsA family ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_002360 protein translocase SEC61 complex subunit gamma	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      Hrr1229_008835 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Hrr1229_002880 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Hrr1229_006140 tuf; translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006575 GTP-binding protein	K03231 EEF1A; elongation factor 1-alpha
C    04121 Ubiquitin system [BR:halq04121]
D      Hrr1229_004900 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
C    03051 Proteasome [BR:halq03051]
D      Hrr1229_002155 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_011265 psmA; archaeal proteasome endopeptidase complex subunit alpha	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      Hrr1229_003135 psmB; archaeal proteasome endopeptidase complex subunit beta	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D      Hrr1229_005985 proteasome-activating nucleotidase	K03420 psmR; proteasome regulatory subunit
D      Hrr1229_009765 proteasome-activating nucleotidase	K03420 psmR; proteasome regulatory subunit
C    03032 DNA replication proteins [BR:halq03032]
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
D      Hrr1229_004820 ribonuclease HI family protein	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      Hrr1229_010650 ribonuclease HI family protein	K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_011780 AAA family ATPase	K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      Hrr1229_010220 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_015890 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_016030 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_000140 RNA-protein complex protein Nop10	K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D      Hrr1229_013005 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5	K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D      Hrr1229_014245 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Hrr1229_011880 DNA primase	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      Hrr1229_001255 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_006920 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_007440 ORC1-type DNA replication protein	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_008195 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_012860 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_014125 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_016165 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_017320 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_017525 AAA family ATPase	K10725 cdc6A; archaeal cell division control protein 6
D      Hrr1229_008335 ATPase	K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D      Hrr1229_009345 priS; DNA primase small subunit PriS	K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D      Hrr1229_007960 DNA primase	K18882 priL; DNA primase large subunit
D      Hrr1229_009340 hypothetical protein	K09723 ginS; DNA replication factor GINS
D      Hrr1229_010035 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Hrr1229_006025 Hint domain-containing protein	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      Hrr1229_017570 type B DNA-directed DNA polymerase	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      Hrr1229_006175 DNA-directed DNA polymerase II large subunit	K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D      Hrr1229_006910 DNA-directed DNA polymerase II small subunit	K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D      Hrr1229_012790 replication factor C large subunit	K04800 rfcL; replication factor C large subunit
D      Hrr1229_004590 replication factor C small subunit	K04801 rfcS; replication factor C small subunit
D      Hrr1229_007980 AAA family ATPase	K04801 rfcS; replication factor C small subunit
D      Hrr1229_008225 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_012640 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_002270 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Hrr1229_002275 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Hrr1229_015265 DNA topoisomerase IV subunit A	K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D      Hrr1229_015270 DNA topoisomerase VI subunit B	K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D      Hrr1229_005405 topoisomerase DNA-binding C4 zinc finger domain-containing protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      Hrr1229_008355 DUF91 domain-containing protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:halq03036]
D      Hrr1229_010220 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_015890 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_016030 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_008655 hypothetical protein	K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D      Hrr1229_006375 NFYB/HAP3 family transcription factor subunit	K24450 hmf; DNA-binding protein
D      Hrr1229_014245 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Hrr1229_009155 DNA starvation/stationary phase protection protein	K04047 dps; starvation-inducible DNA-binding protein
D      Hrr1229_011615 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_014390 Lrp/AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_016700 AsnC family transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_016800 winged helix-turn-helix transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_017945 winged helix-turn-helix transcriptional regulator	K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D      Hrr1229_004325 smc; chromosome segregation protein SMC	K03529 smc; chromosome segregation protein
D      Hrr1229_004330 segregation/condensation protein A	K05896 scpA; segregation and condensation protein A
D      Hrr1229_017380 chromosome segregation protein SMC	K24719 sph1; smc-like protein Sph1
D      Hrr1229_002365 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_004305 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_011055 hypothetical protein	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_000635 cell division inhibitor MinD	K03609 minD; septum site-determining protein MinD
D      Hrr1229_003050 AAA family ATPase	K03609 minD; septum site-determining protein MinD
D      Hrr1229_005520 P-loop NTPase	K03609 minD; septum site-determining protein MinD
D      Hrr1229_008310 chromosome partitioning protein ParA	K03609 minD; septum site-determining protein MinD
D      Hrr1229_017765 ParA family protein	K03496 parA; chromosome partitioning protein
D      Hrr1229_018050 ParA family protein	K03496 parA; chromosome partitioning protein
D      Hrr1229_005805 tyrosine-type recombinase/integrase	K04763 xerD; integrase/recombinase XerD
D      Hrr1229_010670 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_013110 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_015130 P-loop NTPase	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_017740 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
C    03400 DNA repair and recombination proteins [BR:halq03400]
D      Hrr1229_015405 methylated-DNA--[protein]-cysteine S-methyltransferase	K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D      Hrr1229_005460 deoxyribodipyrimidine photo-lyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      Hrr1229_014680 deoxyribodipyrimidine photo-lyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      Hrr1229_009960 A/G-specific adenine glycosylase	K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D      Hrr1229_014180 DNA-3-methyladenine glycosylase 2 family protein	K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_000940 endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_001785 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      Hrr1229_007285 DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_016040 hypothetical protein	K04802 PCNA; proliferating cell nuclear antigen
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      Hrr1229_014075 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_017150 DEAD/DEAH box helicase family protein	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      Hrr1229_000605 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_007420 ATP-dependent DNA helicase	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      Hrr1229_006370 single-stranded DNA binding protein	K07466 RFA1; replication factor A1
D      Hrr1229_006445 deoxyuridine 5'-triphosphate nucleotidohydrolase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      Hrr1229_008865 cryptochrome/photolyase family protein	K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D      Hrr1229_003145 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_005035 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_012245 uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      Hrr1229_012705 DNA-3-methyladenine glycosylase 2 family protein	K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D      Hrr1229_003765 deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      Hrr1229_003070 endonuclease V	K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D      Hrr1229_007825 DHH family phosphoesterase	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      Hrr1229_007530 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      Hrr1229_007330 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      Hrr1229_007480 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      Hrr1229_007035 excinuclease ABC subunit C	K03703 uvrC; excinuclease ABC subunit C
D      Hrr1229_005895 ATP-dependent helicase	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      Hrr1229_006330 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      Hrr1229_010475 mutS; DNA mismatch repair protein MutS	K03555 mutS; DNA mismatch repair protein MutS
D      Hrr1229_007320 endonuclease MutS2	K07456 mutS2; DNA mismatch repair protein MutS2
D      Hrr1229_014255 DNA mismatch repair protein	K07456 mutS2; DNA mismatch repair protein MutS2
D      Hrr1229_003240 mutL; DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      Hrr1229_010480 DNA mismatch repair endonuclease MutL	K03572 mutL; DNA mismatch repair protein MutL
D      Hrr1229_016465 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Hrr1229_017015 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      Hrr1229_016460 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Hrr1229_017020 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      Hrr1229_008225 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_012640 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_006005 DNA double-strand break repair ATPase Rad50	K03546 sbcC; DNA repair protein SbcC/Rad50
D      Hrr1229_008155 AAA family ATPase	K03546 sbcC; DNA repair protein SbcC/Rad50
D      Hrr1229_006000 exonuclease SbcCD subunit D	K03547 sbcD; DNA repair protein SbcD/Mre11
D      Hrr1229_008150 DNA repair exonuclease	K03547 sbcD; DNA repair protein SbcD/Mre11
D      Hrr1229_007405 radA; DNA repair and recombination protein RadA	K04483 radA; DNA repair protein RadA
D      Hrr1229_012400 radB; DNA repair and recombination protein RadB	K04484 radB; DNA repair protein RadB
D      Hrr1229_007260 nucleoid-structuring protein H-NS	K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D      Hrr1229_007165 ATP-dependent DNA helicase	K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D      Hrr1229_016110 DEAD/DEAH box helicase	K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D      Hrr1229_002270 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      Hrr1229_002275 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      Hrr1229_005405 topoisomerase DNA-binding C4 zinc finger domain-containing protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      Hrr1229_008355 DUF91 domain-containing protein	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      Hrr1229_014245 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      Hrr1229_008565 DNA polymerase IV	K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
D      Hrr1229_003805 polX; DNA polymerase/3'-5' exonuclease PolX	K02347 polX; DNA polymerase (family X)
D      Hrr1229_005000 DEAD/DEAH box helicase	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      Hrr1229_015485 ATP-dependent helicase	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      Hrr1229_007500 ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_008890 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      Hrr1229_007495 ribonucleotide-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      Hrr1229_004810 hypothetical protein	K22585 nreA; DNA repair protein NreA
C    03029 Mitochondrial biogenesis [BR:halq03029]
D      Hrr1229_008700 ribonuclease P protein component 1	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      Hrr1229_002150 ribonuclease P	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      Hrr1229_002140 ribonuclease P	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      Hrr1229_006925 GTP-binding protein	K03595 era; GTPase
D      Hrr1229_008360 tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      Hrr1229_004985 leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      Hrr1229_004890 glyS; glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      Hrr1229_006060 arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      Hrr1229_000505 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_004400 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_000510 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      Hrr1229_003445 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      Hrr1229_014875 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      Hrr1229_003450 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      Hrr1229_000690 glutaredoxin	K07390 grxD; monothiol glutaredoxin
D      Hrr1229_010670 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_013110 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_015130 P-loop NTPase	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_017740 Mrp/NBP35 family ATP-binding protein	K03593 mrp; ATP-binding protein involved in chromosome partitioning
D      Hrr1229_009125 protoheme IX farnesyltransferase	K02257 COX10; heme o synthase [EC:2.5.1.141]
D      Hrr1229_012755 cytochrome oxidase assembly	K02259 COX15; heme a synthase [EC:1.17.99.9]
D      Hrr1229_012410 SCO family protein	K07152 SCO1; protein SCO1
D      Hrr1229_013785 SCO family protein	K07152 SCO1; protein SCO1
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:halq02000]
D      Hrr1229_006530 ABC transporter ATP-binding protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      Hrr1229_017560 ABC transporter ATP-binding protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      Hrr1229_017745 extracellular solute-binding protein	K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D      Hrr1229_017750 ABC transporter permease subunit	K15496 wtpB; molybdate/tungstate transport system permease protein
D      Hrr1229_017755 ABC transporter ATP-binding protein	K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D      Hrr1229_010225 substrate-binding domain-containing protein	K05772 tupA; tungstate transport system substrate-binding protein
D      Hrr1229_012140 substrate-binding domain-containing protein	K05772 tupA; tungstate transport system substrate-binding protein
D      Hrr1229_012145 ABC transporter permease	K05773 tupB; tungstate transport system permease protein
D      Hrr1229_012150 phosphate ABC transporter ATP-binding protein	K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D      Hrr1229_001935 aliphatic sulfonate ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011810 ABC transporter substrate-binding protein	K15553 ssuA; sulfonate transport system substrate-binding protein
D      Hrr1229_011815 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001940 ABC transporter permease	K15554 ssuC; sulfonate transport system permease protein
D      Hrr1229_001945 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_011820 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_009590 ABC transporter ATP-binding protein	K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D      Hrr1229_006110 extracellular solute-binding protein	K02012 afuA; iron(III) transport system substrate-binding protein
D      Hrr1229_000830 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_001515 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_006080 iron ABC transporter permease	K02011 afuB; iron(III) transport system permease protein
D      Hrr1229_000825 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_001510 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_004050 ABC transporter ATP-binding protein	K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D      Hrr1229_007185 thiamine ABC transporter substrate-binding protein	K02064 thiB; thiamine transport system substrate-binding protein
D      Hrr1229_007190 iron ABC transporter permease	K02063 thiP; thiamine transport system permease protein
D      Hrr1229_007195 ABC transporter ATP-binding protein	K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D      Hrr1229_009595 ABC transporter substrate-binding protein	K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D      Hrr1229_009600 ABC transporter permease	K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D      Hrr1229_003245 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_008000 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_008435 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_017455 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      Hrr1229_003250 extracellular solute-binding protein	K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D      Hrr1229_003255 sugar ABC transporter permease	K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Hrr1229_003260 ABC transporter permease subunit	K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D      Hrr1229_007985 carbohydrate ABC transporter substrate-binding protein	K17315 gtsA; glucose/mannose transport system substrate-binding protein
D      Hrr1229_007990 sugar ABC transporter permease	K17316 gtsB; glucose/mannose transport system permease protein
D      Hrr1229_007995 carbohydrate ABC transporter permease	K17317 gtsC; glucose/mannose transport system permease protein
D      Hrr1229_008450 extracellular solute-binding protein	K10236 thuE; trehalose/maltose transport system substrate-binding protein
D      Hrr1229_008445 sugar ABC transporter permease	K10237 thuF; trehalose/maltose transport system permease protein
D      Hrr1229_008440 carbohydrate ABC transporter permease	K10238 thuG; trehalose/maltose transport system permease protein
D      Hrr1229_001910 BMP family ABC transporter substrate-binding protein	K07335 bmpA; basic membrane protein A and related proteins
D      Hrr1229_014965 BMP family protein	K07335 bmpA; basic membrane protein A and related proteins
D      Hrr1229_001900 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      Hrr1229_014975 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      Hrr1229_001895 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      Hrr1229_014980 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      Hrr1229_001905 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      Hrr1229_014970 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      Hrr1229_017420 extracellular solute-binding protein	K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D      Hrr1229_017440 sugar ABC transporter permease	K02025 ABC.MS.P; multiple sugar transport system permease protein
D      Hrr1229_017445 carbohydrate ABC transporter permease	K02026 ABC.MS.P1; multiple sugar transport system permease protein
D      Hrr1229_004190 PstS family phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_010610 substrate-binding domain-containing protein	K02040 pstS; phosphate transport system substrate-binding protein
D      Hrr1229_004195 pstC; phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      Hrr1229_010615 pstC; phosphate ABC transporter permease subunit PstC	K02037 pstC; phosphate transport system permease protein
D      Hrr1229_004200 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      Hrr1229_010620 pstA; phosphate ABC transporter permease PstA	K02038 pstA; phosphate transport system permease protein
D      Hrr1229_004205 pstB; phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Hrr1229_010625 pstB; phosphate ABC transporter ATP-binding protein	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      Hrr1229_000365 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010540 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_013980 ABC transporter substrate-binding protein	K01999 livK; branched-chain amino acid transport system substrate-binding protein
D      Hrr1229_010560 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_011935 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_000360 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_013995 branched-chain amino acid ABC transporter permease	K01997 livH; branched-chain amino acid transport system permease protein
D      Hrr1229_010565 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_011930 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_014000 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_000355 branched-chain amino acid ABC transporter permease	K01998 livM; branched-chain amino acid transport system permease protein
D      Hrr1229_010570 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000350 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013985 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011925 ABC transporter ATP-binding protein	K01995 livG; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_010575 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_000345 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_013990 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_011920 ABC transporter ATP-binding protein	K01996 livF; branched-chain amino acid transport system ATP-binding protein
D      Hrr1229_012760 basic amino acid ABC transporter substrate-binding protein	K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D      Hrr1229_012765 amino acid ABC transporter permease	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      Hrr1229_012775 amino acid ABC transporter permease	K02029 ABC.PA.P; polar amino acid transport system permease protein
D      Hrr1229_012770 amino acid ABC transporter ATP-binding protein	K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D      Hrr1229_003485 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_005145 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_005370 peptide ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_006255 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_011945 ABC transporter substrate-binding protein	K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D      Hrr1229_003480 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_004935 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_005140 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_005365 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_011950 ABC transporter permease	K02033 ABC.PE.P; peptide/nickel transport system permease protein
D      Hrr1229_003475 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_004940 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_005135 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_005360 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_011955 ABC transporter permease	K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D      Hrr1229_003470 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_004945 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_004965 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005150 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005355 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_011960 ABC transporter ATP-binding protein	K02031 ddpD; peptide/nickel transport system ATP-binding protein
D      Hrr1229_003465 ATP-binding cassette domain-containing protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_005350 ATP-binding cassette domain-containing protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_011965 ABC transporter ATP-binding protein	K02032 ddpF; peptide/nickel transport system ATP-binding protein
D      Hrr1229_003090 cobalamin-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      Hrr1229_005105 ABC transporter substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      Hrr1229_010130 ABC transporter substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      Hrr1229_003740 iron ABC transporter permease	K02015 ABC.FEV.P; iron complex transport system permease protein
D      Hrr1229_003735 ABC transporter ATP-binding protein	K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D      Hrr1229_001920 ABC transporter substrate-binding protein	K25034 btuF; cobalamin transport system substrate-binding protein
D      Hrr1229_001925 btuC; vitamin B12 ABC transporter permease BtuC	K25027 btuC; cobalamin transport system permease protein
D      Hrr1229_001930 ATP-binding cassette domain-containing protein	K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D      Hrr1229_000020 metal ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      Hrr1229_002055 zinc ABC transporter substrate-binding protein	K09815 znuA; zinc transport system substrate-binding protein
D      Hrr1229_002045 metal ABC transporter permease	K09816 znuB; zinc transport system permease protein
D      Hrr1229_000015 metal ABC transporter ATP-binding protein	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Hrr1229_002050 metal ABC transporter ATP-binding protein	K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D      Hrr1229_004155 biotin transporter BioY	K03523 bioY; biotin transport system substrate-specific component
D      Hrr1229_004165 energy-coupling factor transporter transmembrane protein EcfT	K16783 bioN; biotin transport system permease protein
D      Hrr1229_004160 ABC transporter ATP-binding protein	K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D      Hrr1229_000410 ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      Hrr1229_013805 copper ABC transporter permease	K19341 nosY; Cu-processing system permease protein
D      Hrr1229_013815 right-handed parallel beta-helix repeat-containing protein	K07218 nosD; nitrous oxidase accessory protein
D      Hrr1229_000415 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
D      Hrr1229_013810 ABC transporter ATP-binding protein	K19340 nosF; Cu-processing system ATP-binding protein
D      Hrr1229_009715 ABC transporter permease subunit	K25147 berB; beta-exotoxin I transport system permease protein
D      Hrr1229_009720 ABC transporter ATP-binding protein	K25148 berA; beta-exotoxin I transport system ATP-binding protein
D      Hrr1229_004735 ABC transporter permease	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_005060 ABC transporter permease	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_007515 ABC transporter permease subunit	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_014905 ABC transporter permease	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_016840 hypothetical protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_017985 hypothetical protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      Hrr1229_004730 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_005065 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_007520 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_014915 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_016845 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_017990 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      Hrr1229_011250 ABC transporter permease	K02004 ABC.CD.P; putative ABC transport system permease protein
D      Hrr1229_011255 ABC transporter ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      Hrr1229_006030 ABC transporter ATP-binding protein	K09013 sufC; Fe-S cluster assembly ATP-binding protein
D      Hrr1229_004695 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      Hrr1229_015300 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      Hrr1229_000190 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      Hrr1229_014105 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      Hrr1229_010305 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      Hrr1229_012600 OFA family MFS transporter	K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D      Hrr1229_014785 MFS transporter	K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D      Hrr1229_007695 MFS transporter	K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D      Hrr1229_010760 MFS transporter	K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D      Hrr1229_015195 MFS transporter	K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D      Hrr1229_014440 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      Hrr1229_014435 HPr family phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
D      Hrr1229_014445 PTS mannose transporter subunit IID	K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D      Hrr1229_012240 NAD-binding protein	K10716 kch; voltage-gated potassium channel
D      Hrr1229_007400 ammonium transporter	K03320 amt; ammonium transporter, Amt family
D      Hrr1229_006310 VWA domain-containing protein	K07114 yfbK; Ca-activated chloride channel homolog
D      Hrr1229_000030 mechanosensitive ion channel family protein	K03442 mscS; small conductance mechanosensitive channel
D      Hrr1229_010140 mechanosensitive ion channel family protein	K03442 mscS; small conductance mechanosensitive channel
D      Hrr1229_010310 mechanosensitive ion channel family protein	K03442 mscS; small conductance mechanosensitive channel
D      Hrr1229_010490 mechanosensitive ion channel family protein	K03442 mscS; small conductance mechanosensitive channel
D      Hrr1229_015365 mechanosensitive ion channel family protein	K03442 mscS; small conductance mechanosensitive channel
D      Hrr1229_013095 mechanosensitive ion channel	K22044 ybiO; moderate conductance mechanosensitive channel
D      Hrr1229_014205 mechanosensitive ion channel	K22044 ybiO; moderate conductance mechanosensitive channel
D      Hrr1229_008475 mechanosensitive ion channel family protein	K16052 ynaI; MscS family membrane protein
D      Hrr1229_006960 magnesium transporter	K07244 K07244; mgtE-like transporter
D      Hrr1229_006965 magnesium transporter	K07244 K07244; mgtE-like transporter
D      Hrr1229_004655 CrcB family protein	K06199 crcB; fluoride exporter
D      Hrr1229_004660 CrcB family protein	K06199 crcB; fluoride exporter
D      Hrr1229_004500 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Hrr1229_007055 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Hrr1229_010340 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Hrr1229_012345 PQQ-binding-like beta-propeller repeat protein	K17713 bamB; outer membrane protein assembly factor BamB
D      Hrr1229_016530 cation transporter	K16264 czcD; cobalt-zinc-cadmium efflux system protein
D      Hrr1229_006275 ZIP family metal transporter	K07238 TC.ZIP; zinc transporter, ZIP family
D      Hrr1229_016485 metal transporter	K07238 TC.ZIP; zinc transporter, ZIP family
D      Hrr1229_016725 hypothetical protein	K11741 sugE; quaternary ammonium compound-resistance protein SugE
D      Hrr1229_017870 hypothetical protein	K11741 sugE; quaternary ammonium compound-resistance protein SugE
D      Hrr1229_000180 EamA family transporter	K08978 TC.BAT1; bacterial/archaeal transporter family protein
D      Hrr1229_007525 GntP family permease	K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D      Hrr1229_005115 L-lactate permease	K03303 lutP; lactate permease
D      Hrr1229_011590 L-lactate permease	K03303 lutP; lactate permease
D      Hrr1229_012610 L-lactate permease	K03303 lutP; lactate permease
D      Hrr1229_001035 BCCT family transporter	K05020 opuD; glycine betaine transporter
D      Hrr1229_017645 BCCT family transporter	K05020 opuD; glycine betaine transporter
D      Hrr1229_002375 calcium/sodium antiporter	K07301 yrbG; cation:H+ antiporter
D      Hrr1229_014220 sodium:calcium antiporter	K07301 yrbG; cation:H+ antiporter
D      Hrr1229_015315 VC_2705 family sodium/solute symporter	K14393 actP; cation/acetate symporter
D      Hrr1229_009625 arginine:ornithine antiporter	K24446 arcD; arginine/ornithine antiporter
D      Hrr1229_005570 cation:proton antiporter regulatory subunit	K07228 khtT; K+:H+ antiporter subunit KhtT
D      Hrr1229_005565 cation:proton antiporter	K26732 khtU; K+:H+ antiporter subunit KhtU
D      Hrr1229_000040 TrkH family potassium uptake protein	K03498 trkH; trk/ktr system potassium uptake protein
D      Hrr1229_000045 TrkH family potassium uptake protein	K03498 trkH; trk/ktr system potassium uptake protein
D      Hrr1229_000035 trkA; Trk system potassium transporter TrkA	K03499 trkA; trk/ktr system potassium uptake protein
D      Hrr1229_005235 TrkA family potassium uptake protein	K03499 trkA; trk/ktr system potassium uptake protein
D      Hrr1229_005245 TrkA family potassium uptake protein	K03499 trkA; trk/ktr system potassium uptake protein
D      Hrr1229_005385 NCS2 family permease	K06901 pbuG; adenine/guanine/hypoxanthine permease
D      Hrr1229_003420 TRC40/GET3/ArsA family transport-energizing ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_007110 ArsA family ATPase	K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D      Hrr1229_003970 DUF4040 domain-containing protein	K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D      Hrr1229_000740 cation:proton antiporter	K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D      Hrr1229_000745 DUF4040 domain-containing protein	K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D      Hrr1229_003965 sodium:proton antiporter	K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D      Hrr1229_000735 cation:proton antiporter subunit C	K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D      Hrr1229_003960 NADH-quinone oxidoreductase subunit K	K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D      Hrr1229_000720 Na(+)/H(+) antiporter subunit D	K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D      Hrr1229_000725 cation:proton antiporter	K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D      Hrr1229_000730 monovalent cation/H+ antiporter subunit D family protein	K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D      Hrr1229_003955 Na+/H+ antiporter subunit D	K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D      Hrr1229_003950 Na+/H+ antiporter subunit E	K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D      Hrr1229_000755 cation:proton antiporter	K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D      Hrr1229_003945 pH regulation protein F	K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D      Hrr1229_000750 monovalent cation/H(+) antiporter subunit G	K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D      Hrr1229_003940 monovalent cation/H(+) antiporter subunit G	K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D      Hrr1229_014550 AzlC family ABC transporter permease	K26605 azlC; branched chain amino acid efflux pump
D      Hrr1229_014545 AzlD domain-containing protein	K26606 azlD; branched chain amino acid efflux pump
D      Hrr1229_010790 tripartite tricarboxylate transporter permease	K07793 tctA; putative tricarboxylic transport membrane protein
D      Hrr1229_008645 hypothetical protein	K07794 tctB; putative tricarboxylic transport membrane protein
D      Hrr1229_004485 queuosine precursor transporter	K09125 yhhQ; queuosine precursor transporter
D      Hrr1229_010030 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Hrr1229_016495 TMEM165/GDT1 family protein	K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D      Hrr1229_010075 hypothetical protein	K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D      Hrr1229_012420 cytochrome C biogenesis protein	K06196 ccdA; cytochrome c-type biogenesis protein
D      Hrr1229_015160 molybdopterin-dependent oxidoreductase	K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_015155 respiratory nitrate reductase subunit beta	K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D      Hrr1229_017710 molybdopterin-dependent oxidoreductase	K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D      Hrr1229_017705 4Fe-4S dicluster domain-containing protein	K00184 dmsB; dimethyl sulfoxide reductase iron-sulfur subunit
D      Hrr1229_017700 nrfD; polysulfide reductase NrfD	K00185 dmsC; dimethyl sulfoxide reductase membrane subunit
D      Hrr1229_011525 tryptophan-rich sensory protein	K05770 TSPO; translocator protein
C    02044 Secretion system [BR:halq02044]
D      Hrr1229_007775 flagellin	K07325 flaB; archaeal flagellin FlaB
D      Hrr1229_007780 flagellin	K07325 flaB; archaeal flagellin FlaB
D      Hrr1229_003920 fla cluster protein FlaD	K07328 flaE; archaeal flagellar protein FlaE
D      Hrr1229_007740 flagella accessory C family protein	K23986 flaCE; archaeal flagellar protein FlaCE
D      Hrr1229_007735 flagellin	K07329 flaF; archaeal flagellar protein FlaF
D      Hrr1229_007730 flagellar protein G	K07330 flaG; archaeal flagellar protein FlaG
D      Hrr1229_007725 ATPase	K07331 flaH; archaeal flagellar protein FlaH
D      Hrr1229_000885 type II/IV secretion system ATPase subunit	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_002235 tadA; Flp pilus assembly complex ATPase component TadA	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_007720 type II/IV secretion system ATPase subunit	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_000880 type II secretion system F family protein	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_002230 type II secretion system F family protein	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_007715 flaJ; archaellar assembly protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_011875 prepilin peptidase	K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D      Hrr1229_011655 lamin tail domain-containing protein	K02238 comEC; competence protein ComEC
D      Hrr1229_010025 preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      Hrr1229_010020 protein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      Hrr1229_008775 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      Hrr1229_003855 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      Hrr1229_000570 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      Hrr1229_002360 protein translocase SEC61 complex subunit gamma	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      Hrr1229_002695 signal recognition particle protein Srp19	K03105 SRP19; signal recognition particle subunit SRP19
D      Hrr1229_002250 twin-arginine translocase TatA/TatE family subunit	K03116 tatA; sec-independent protein translocase protein TatA
D      Hrr1229_007335 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      Hrr1229_007340 twin-arginine translocase subunit TatC	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins [BR:halq02042]
D      Hrr1229_004500 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Hrr1229_007055 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
D      Hrr1229_010340 HlyC/CorC family transporter	K03699 tlyC; magnesium and cobalt exporter, CNNM family
C    02022 Two-component system [BR:halq02022]
D      Hrr1229_008045 sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_012785 HAMP domain-containing histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_014170 GAF domain-containing sensor histidine kinase	K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D      Hrr1229_009465 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      Hrr1229_002800 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_007755 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_009460 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C    02035 Bacterial motility proteins [BR:halq02035]
D      Hrr1229_009465 chemotaxis protein CheA	K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D      Hrr1229_009455 purine-binding chemotaxis protein CheW	K03408 cheW; purine-binding chemotaxis protein CheW
D      Hrr1229_007750 chemotaxis protein CheC	K03410 cheC; chemotaxis protein CheC
D      Hrr1229_007745 chemotaxis protein CheD	K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D      Hrr1229_009470 protein-glutamate O-methyltransferase CheR	K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D      Hrr1229_009460 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB	K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D      Hrr1229_002800 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_007755 response regulator	K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D      Hrr1229_004425 extracellular solute-binding protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_005045 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_006505 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_007030 PAS domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_009650 methyl-accepting chemotaxis protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_013660 HAMP domain-containing protein	K03406 mcp; methyl-accepting chemotaxis protein
D      Hrr1229_005325 globin-coupled sensor protein	K06595 hemAT; heam-based aerotactic trancducer
D      Hrr1229_007775 flagellin	K07325 flaB; archaeal flagellin FlaB
D      Hrr1229_007780 flagellin	K07325 flaB; archaeal flagellin FlaB
D      Hrr1229_003920 fla cluster protein FlaD	K07328 flaE; archaeal flagellar protein FlaE
D      Hrr1229_007740 flagella accessory C family protein	K23986 flaCE; archaeal flagellar protein FlaCE
D      Hrr1229_007735 flagellin	K07329 flaF; archaeal flagellar protein FlaF
D      Hrr1229_007730 flagellar protein G	K07330 flaG; archaeal flagellar protein FlaG
D      Hrr1229_007725 ATPase	K07331 flaH; archaeal flagellar protein FlaH
D      Hrr1229_000885 type II/IV secretion system ATPase subunit	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_002235 tadA; Flp pilus assembly complex ATPase component TadA	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_007720 type II/IV secretion system ATPase subunit	K07332 flaI; archaeal flagellar protein FlaI
D      Hrr1229_000880 type II secretion system F family protein	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_002230 type II secretion system F family protein	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_007715 flaJ; archaellar assembly protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      Hrr1229_011875 prepilin peptidase	K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:halq04812]
D      Hrr1229_002365 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_004305 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_011055 hypothetical protein	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_001240 cell division protein	K22222 cetZ; tubulin-like protein CetZ
D      Hrr1229_002780 cell division protein FtsZ	K22222 cetZ; tubulin-like protein CetZ
D      Hrr1229_005925 cell division protein	K22222 cetZ; tubulin-like protein CetZ
D      Hrr1229_010325 cell division protein	K22222 cetZ; tubulin-like protein CetZ
D      Hrr1229_017535 cell division protein	K22222 cetZ; tubulin-like protein CetZ
D      Hrr1229_000635 cell division inhibitor MinD	K03609 minD; septum site-determining protein MinD
D      Hrr1229_003050 AAA family ATPase	K03609 minD; septum site-determining protein MinD
D      Hrr1229_005520 P-loop NTPase	K03609 minD; septum site-determining protein MinD
D      Hrr1229_008310 chromosome partitioning protein ParA	K03609 minD; septum site-determining protein MinD
D      Hrr1229_017765 ParA family protein	K03496 parA; chromosome partitioning protein
D      Hrr1229_018050 ParA family protein	K03496 parA; chromosome partitioning protein
C    04147 Exosome [BR:halq04147]
D      Hrr1229_013080 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_017490 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      Hrr1229_008835 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      Hrr1229_008830 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      Hrr1229_002880 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      Hrr1229_013940 peptidylprolyl isomerase	K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D      Hrr1229_006140 tuf; translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006575 GTP-binding protein	K03231 EEF1A; elongation factor 1-alpha
D      Hrr1229_006165 elongation factor EF-2	K03234 EEF2; elongation factor 2
D      Hrr1229_003445 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      Hrr1229_009670 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      Hrr1229_013220 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      Hrr1229_015770 guanosine monophosphate reductase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Hrr1229_016100 guaB; IMP dehydrogenase	K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D      Hrr1229_013850 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_008900 CDC48 family AAA ATPase	K13525 VCP; transitional endoplasmic reticulum ATPase
D      Hrr1229_006545 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      Hrr1229_011120 long-chain fatty acid--CoA ligase	K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D      Hrr1229_000150 3-ketoacyl-CoA thiolase	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_003235 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_010785 thiolase family protein	K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D      Hrr1229_006600 adenosylhomocysteinase	K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D      Hrr1229_010375 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Hrr1229_014070 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      Hrr1229_001755 purine phosphoribosyltransferase family protein	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Hrr1229_005380 hypothetical protein	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      Hrr1229_007385 argH; argininosuccinate lyase	K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D      Hrr1229_007390 argininosuccinate synthase	K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D      Hrr1229_000680 PLP-dependent transferase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_013955 cystathionine gamma-synthase	K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D      Hrr1229_008605 fructose-1,6-bisphosphatase	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      Hrr1229_002100 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      Hrr1229_008820 glnA; type I glutamate--ammonia ligase	K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D      Hrr1229_006850 hemB; porphobilinogen synthase	K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D      Hrr1229_011470 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      Hrr1229_004545 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_007060 phosphoglycerate dehydrogenase	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_017460 C-terminal binding protein	K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D      Hrr1229_006210 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      Hrr1229_004580 electron transfer flavoprotein subunit alpha/FixB family protein	K03522 fixB; electron transfer flavoprotein alpha subunit
D      Hrr1229_005185 electron transfer flavoprotein subunit alpha/FixB family protein	K03522 fixB; electron transfer flavoprotein alpha subunit
D      Hrr1229_000670 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_001000 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_010655 Glu/Leu/Phe/Val dehydrogenase	K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D      Hrr1229_003440 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    02048 Prokaryotic defense system [BR:halq02048]
D      Hrr1229_004145 hypothetical protein	K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D      Hrr1229_008225 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_012640 Dam family site-specific DNA-(adenine-N6)-methyltransferase	K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D      Hrr1229_010220 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_015890 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_016030 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      Hrr1229_008180 AAA family ATPase	K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D      Hrr1229_017785 type II toxin-antitoxin system PemK/MazF family toxin	K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D      Hrr1229_001105 AbrB/MazE/SpoVT family DNA-binding domain-containing protein	K19156 prlF; antitoxin PrlF
D      Hrr1229_017250 type II toxin-antitoxin system RelE/ParE family toxin	K06218 relE; mRNA interferase RelE/StbE
D      Hrr1229_004310 ribbon-helix-helix protein, CopG family	K07746 parD1_3_4; antitoxin ParD1/3/4
D      Hrr1229_001460 type II toxin-antitoxin system death-on-curing family toxin	K07341 doc; death on curing protein
D      Hrr1229_008065 type II toxin-antitoxin system death-on-curing family toxin	K07341 doc; death on curing protein
D      Hrr1229_005610 type II toxin-antitoxin system VapC family toxin	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      Hrr1229_007905 PIN domain-containing protein	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      Hrr1229_002365 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_004305 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_011055 hypothetical protein	K03531 ftsZ; cell division protein FtsZ
D      Hrr1229_009180 glutamate--tRNA ligase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      Hrr1229_012115 NOB1 family endonuclease	K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
D      Hrr1229_008205 chromosome segregation protein	K19171 dndD; DNA sulfur modification protein DndD
D      Hrr1229_016325 AAA family ATPase	K19171 dndD; DNA sulfur modification protein DndD
C    04030 G protein-coupled receptors [BR:halq04030]
D      Hrr1229_003655 bacteriorhodopsin	K04641 bop; bacteriorhodopsin
D      Hrr1229_002945 bacteriorhodopsin	K04642 hop; halorhodopsin
D      Hrr1229_005040 bacteriorhodopsin	K04643 sop; sensory rhodopsin
D      Hrr1229_006500 bacteriorhodopsin	K04643 sop; sensory rhodopsin
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes [BR:halq01504]
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:halq03100]
D      Hrr1229_005850 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_006810 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_014140 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_002620 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      Hrr1229_008255 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_002245 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_006365 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_015800 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_010195 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_001570 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      Hrr1229_004640 tRNA-Asn	K14220 tRNA-Asn; tRNA Asn
D      Hrr1229_001535 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006385 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006390 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      Hrr1229_006795 tRNA-Cys	K14222 tRNA-Cys; tRNA Cys
D      Hrr1229_003975 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      Hrr1229_013960 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_001550 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_010530 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      Hrr1229_013905 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_008635 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_009990 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_000790 tRNA-Gly	K14225 tRNA-Gly; tRNA Gly
D      Hrr1229_012745 tRNA-His	K14226 tRNA-His; tRNA His
D      Hrr1229_014480 tRNA-Ile	K14227 tRNA-Ile; tRNA Ile
D      Hrr1229_011710 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_000955 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_007585 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_013050 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_014375 tRNA-Leu	K14228 tRNA-Leu; tRNA Leu
D      Hrr1229_015730 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Hrr1229_007235 tRNA-Lys	K14229 tRNA-Lys; tRNA Lys
D      Hrr1229_000585 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_001555 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_010500 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      Hrr1229_004630 tRNA-Ile	K14230 tRNA-Met; tRNA Met
D      Hrr1229_006625 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      Hrr1229_013330 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_013000 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_006620 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      Hrr1229_011495 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_013025 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_004460 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_011110 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_004115 tRNA-Ser	K14233 tRNA-Ser; tRNA Ser
D      Hrr1229_000210 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Hrr1229_009975 tRNA-Thr	K14234 tRNA-Thr; tRNA Thr
D      Hrr1229_016085 tRNA-Trp	K14235 tRNA-Trp; tRNA Trp
D      Hrr1229_013720 tRNA-Tyr	K14236 tRNA-Tyr; tRNA Tyr
D      Hrr1229_012455 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_012485 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_008020 tRNA-Val	K14237 tRNA-Val; tRNA Val
D      Hrr1229_006815 16S ribosomal RNA	K01977 16SrRNA; 16S ribosomal RNA
D      Hrr1229_006805 23S ribosomal RNA	K01980 23SrRNA; 23S ribosomal RNA
D      Hrr1229_006800 rrf; 5S ribosomal RNA	K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      Hrr1229_010840 D-2-hydroxyacid dehydrogenase	K17064 ddh; D-2-hydroxyacid dehydrogenase (NADP+) [EC:1.1.1.272]
D      Hrr1229_013535 D-2-hydroxyacid dehydrogenase	K17064 ddh; D-2-hydroxyacid dehydrogenase (NADP+) [EC:1.1.1.272]
D      Hrr1229_000445 aldo/keto reductase	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      Hrr1229_002975 aldo/keto reductase	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      Hrr1229_006510 aldo/keto reductase	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      Hrr1229_008630 aldo/keto reductase	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      Hrr1229_012380 aldo/keto reductase	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      Hrr1229_010730 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D      Hrr1229_010725 alpha-ketoacid dehydrogenase subunit beta	K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D      Hrr1229_008640 PQQ-dependent sugar dehydrogenase	K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D      Hrr1229_001855 aldo/keto reductase	K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D      Hrr1229_008875 aldo/keto reductase	K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D      Hrr1229_014085 aldo/keto reductase	K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D      Hrr1229_010970 (2Fe-2S)-binding protein	K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D      Hrr1229_010965 xanthine dehydrogenase family protein subunit M	K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D      Hrr1229_010975 carbon-monoxide dehydrogenase large subunit	K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D      Hrr1229_005335 npdG; NADPH-dependent F420 reductase	K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D      Hrr1229_012445 NAD(P)/FAD-dependent oxidoreductase	K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D      Hrr1229_005190 FAD-dependent oxidoreductase	K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D      Hrr1229_009200 FAD-dependent monooxygenase	K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D      Hrr1229_012620 NAD(P)-binding protein	K18208 RNLS; renalase [EC:1.6.3.5]
D      Hrr1229_010770 NADPH:quinone reductase	K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D      Hrr1229_001065 NADP-dependent oxidoreductase	K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D      Hrr1229_012550 dihydrolipoyl dehydrogenase	K17883 mtr; mycothione reductase [EC:1.8.1.15]
D      Hrr1229_017775 FAD-dependent oxidoreductase	K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D      Hrr1229_000535 msrA; peptide-methionine (S)-S-oxide reductase MsrA	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      Hrr1229_015250 msrB; peptide-methionine (R)-S-oxide reductase MsrB	K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D      Hrr1229_003265 glutathione S-transferase family protein	K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D      Hrr1229_012165 bcp; thioredoxin-dependent thiol peroxidase	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      Hrr1229_002255 redoxin domain-containing protein	K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D      Hrr1229_004510 redoxin domain-containing protein	K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D      Hrr1229_013625 redoxin domain-containing protein	K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D      Hrr1229_012595 pirin family protein	K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D      Hrr1229_003125 beta-carotene 15,15'-dioxygenase, Brp/Blh family	K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D      Hrr1229_006995 beta-carotene 15,15'-dioxygenase, Brp/Blh family	K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D      Hrr1229_006450 LLM class flavin-dependent oxidoreductase	K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D      Hrr1229_016225 merA; mercury(II) reductase	K00520 merA; mercuric reductase [EC:1.16.1.1]
D      Hrr1229_013555 multicopper oxidase domain-containing protein	K06324 cotA; spore coat protein A, manganese oxidase [EC:1.16.3.3]
D      Hrr1229_010645 low molecular weight phosphatase family protein	K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D      Hrr1229_004675 protein-L-isoaspartate O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      Hrr1229_004680 protein-L-isoaspartate(D-aspartate) O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      Hrr1229_002320 diphthine synthase	K20215 dph5; diphthine synthase [EC:2.1.1.98]
D      Hrr1229_001135 acyltransferase	K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D      Hrr1229_011310 sugar O-acetyltransferase	K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D      Hrr1229_012220 deoxyhypusine synthase	K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D      Hrr1229_007455 larB; nickel pincer cofactor biosynthesis protein LarB	K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D      Hrr1229_011345 DUF5591 domain-containing protein	K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-]
D      Hrr1229_014520 archaeosine biosynthesis radical SAM protein RaSEA	K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D      Hrr1229_014760 DNA integrity scanning protein DisA nucleotide-binding domain protein	K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D      Hrr1229_004440 moeB; molybdopterin-synthase adenylyltransferase MoeB	K22837 ubaA; SAMP-activating enzyme [EC:2.7.7.100]
D      Hrr1229_015430 moeB; molybdopterin-synthase adenylyltransferase MoeB	K22837 ubaA; SAMP-activating enzyme [EC:2.7.7.100]
D      Hrr1229_015125 CDP-alcohol phosphatidyltransferase family protein	K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D      Hrr1229_010820 CoA transferase	K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D      Hrr1229_008780 macro domain-containing protein	K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D      Hrr1229_012465 acyl-CoA thioesterase	K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D      Hrr1229_006605 nucS; endonuclease NucS	K07503 nucS; endonuclease [EC:3.1.-.-]
D      Hrr1229_004450 RidA family protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      Hrr1229_007325 RidA family protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      Hrr1229_004110 AAA family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      Hrr1229_012035 AAA family ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      Hrr1229_000895 SAM-dependent chlorinase/fluorinase	K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D      Hrr1229_015560 NAD(P)H-hydrate dehydratase	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      Hrr1229_007315 larE; ATP-dependent sacrificial sulfur transferase LarE	K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D      Hrr1229_013855 larC; nickel pincer cofactor biosynthesis protein LarC	K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D      Hrr1229_002970 cation-translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      Hrr1229_009115 heavy metal translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      Hrr1229_016685 copper-translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      Hrr1229_017005 heavy metal translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      Hrr1229_017830 copper-translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      Hrr1229_008520 cation-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_011985 cation-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_016350 cation-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_016525 cadA; cadmium-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_016875 cation-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_016950 cadA; cadmium-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D      Hrr1229_018020 cation-translocating P-type ATPase	K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C    99981 Carbohydrate metabolism
D      Hrr1229_015040 LUD domain-containing protein	K00782 lldG; L-lactate dehydrogenase complex protein LldG
C    99982 Energy metabolism
D      Hrr1229_006845 ferredoxin	K05337 fer; ferredoxin
D      Hrr1229_009415 SUF system NifU family Fe-S cluster assembly protein	K04488 iscU; nitrogen fixation protein NifU and related proteins
D      Hrr1229_015175 Rieske (2Fe-2S) protein	K15878 K15878; rieske iron-sulfur protein
D      Hrr1229_015170 cytochrome bc complex cytochrome b subunit	K15879 narC; cytochrome b-561
D      Hrr1229_004575 electron transfer flavoprotein subunit beta/FixA family protein	K03521 fixA; electron transfer flavoprotein beta subunit
D      Hrr1229_005180 electron transfer flavoprotein subunit beta/FixA family protein	K03521 fixA; electron transfer flavoprotein beta subunit
D      Hrr1229_009190 electron transfer flavoprotein subunit beta/FixA family protein	K03521 fixA; electron transfer flavoprotein beta subunit
D      Hrr1229_005195 4Fe-4S dicluster domain-containing protein	K03855 fixX; ferredoxin like protein
D      Hrr1229_008400 dodecin domain-containing protein	K09165 K09165; dodecin
C    99983 Lipid metabolism
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
C    99986 Glycan metabolism
D      Hrr1229_015580 flippase-like domain-containing protein	K07027 K07027; glycosyltransferase 2 family protein
C    99987 Cofactor metabolism
C    99988 Secondary metabolism
C    99999 Others
D      Hrr1229_014935 VOC family protein	K15975 K15975; glyoxalase family protein
D      Hrr1229_003820 DoxX family protein	K15977 K15977; putative oxidoreductase
D      Hrr1229_009605 DoxX family protein	K15977 K15977; putative oxidoreductase
D      Hrr1229_014940 DoxX family membrane protein	K15977 K15977; putative oxidoreductase
D      Hrr1229_000625 dienelactone hydrolase family protein	K06999 K06999; phospholipase/carboxylesterase
D      Hrr1229_006765 dienelactone hydrolase family protein	K06999 K06999; phospholipase/carboxylesterase
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      Hrr1229_003430 TIGR00270 family protein	K03627 MBF1; putative transcription factor
D      Hrr1229_006655 cold-shock protein	K03704 cspA; cold shock protein
D      Hrr1229_012275 cold-shock protein	K03704 cspA; cold shock protein
D      Hrr1229_012405 cold-shock protein	K03704 cspA; cold shock protein
D      Hrr1229_015295 cold-shock protein	K03704 cspA; cold shock protein
D      Hrr1229_012195 Like-Sm ribonucleoprotein core	K04796 RUXX; small nuclear ribonucleoprotein
D      Hrr1229_001770 ArsR family transcriptional regulator	K07743 K07743; transcriptional regulator
D      Hrr1229_002500 Rrf2 family transcriptional regulator	K07744 K07744; transcriptional regulator
D      Hrr1229_013925 Rrf2 family transcriptional regulator	K07744 K07744; transcriptional regulator
C    99974 Translation
D      Hrr1229_010150 DUF655 domain-containing protein	K07572 K07572; putative nucleotide binding protein
D      Hrr1229_009330 MBL fold metallo-hydrolase	K07577 K07577; putative mRNA 3-end processing factor
D      Hrr1229_014290 methyltransferase	K07579 K07579; putative methylase
D      Hrr1229_009070 DUF1610 domain-containing protein	K07580 K07580; Zn-ribbon RNA-binding protein
D      Hrr1229_016080 zf-TFIIB domain-containing protein	K07580 K07580; Zn-ribbon RNA-binding protein
D      Hrr1229_001830 RNA-binding protein	K07581 K07581; RNA-binding protein
D      Hrr1229_011150 alpha hydrolase	K07585 K07585; tRNA methyltransferase
C    99975 Protein processing
D      Hrr1229_008390 hydrogenase expression protein	K04655 hypE; hydrogenase expression/formation protein HypE
D      Hrr1229_003540 pseudouridine synthase	K07398 K07398; conserved protein with predicted RNA binding PUA domain
D      Hrr1229_006715 NifU family protein	K07400 nfuA; Fe/S biogenesis protein NfuA
D      Hrr1229_009120 SelT/SelW/SelH family protein	K07401 K07401; selenoprotein W-related protein
D      Hrr1229_010980 YHS domain-containing protein	K07402 xdhC; xanthine dehydrogenase accessory factor
D      Hrr1229_011000 XdhC family protein	K07402 xdhC; xanthine dehydrogenase accessory factor
C    99976 Replication and repair
D      Hrr1229_001070 IS607 family transposase	K07450 K07450; putative resolvase
D      Hrr1229_007465 GIY-YIG nuclease family protein	K07461 K07461; putative endonuclease
D      Hrr1229_009140 S1 RNA-binding domain-containing protein	K07463 K07463; archaea-specific RecJ-like exonuclease
D      Hrr1229_016415 hypothetical protein	K06919 K06919; putative DNA primase/helicase
D      Hrr1229_017515 IS110 family transposase	K07486 K07486; transposase
D      Hrr1229_005100 tnpA; IS200/IS605 family transposase	K07491 rayT; REP-associated tyrosine transposase
D      Hrr1229_000185 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_001050 transposase	K07496 K07496; putative transposase
D      Hrr1229_001380 transposase	K07496 K07496; putative transposase
D      Hrr1229_001420 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_001430 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_001915 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_002640 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_003875 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_005095 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_008580 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_010235 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_017205 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_017620 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_017680 tnpB; IS200/IS605 family element transposase accessory protein TnpB	K07496 K07496; putative transposase
D      Hrr1229_017530 IS6 family transposase	K07498 K07498; putative transposase
C    99979 Viral proteins
C    99998 Others
D      Hrr1229_013185 PspA/IM30 family protein	K03969 pspA; phage shock protein A
D      Hrr1229_015520 type I restriction enzyme HsdR N-terminal domain-containing protein	K07504 K07504; predicted type IV restriction endonuclease
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
D      Hrr1229_000105 formate/nitrite transporter family protein	K21990 yfdC; formate-nitrite transporter family protein
D      Hrr1229_010440 formate/nitrite transporter family protein	K21990 yfdC; formate-nitrite transporter family protein
D      Hrr1229_005240 amino acid permease	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Hrr1229_008795 amino acid permease	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Hrr1229_010410 amino acid permease	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Hrr1229_015425 amino acid permease	K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D      Hrr1229_004600 inorganic phosphate transporter	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      Hrr1229_009995 inorganic phosphate transporter	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      Hrr1229_015840 inorganic phosphate transporter	K03306 TC.PIT; inorganic phosphate transporter, PiT family
D      Hrr1229_011890 sodium:solute symporter family protein	K03307 TC.SSS; solute:Na+ symporter, SSS family
D      Hrr1229_012440 sodium-dependent transporter	K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D      Hrr1229_010585 bile acid:sodium symporter family protein	K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C    99978 Cell growth
D      Hrr1229_006760 SpoVR family protein	K06415 spoVR; stage V sporulation protein R
C    99993 Cell motility
D      Hrr1229_009480 chemotaxis protein CheF1	K09156 cheF; taxis protein CheF
D      Hrr1229_011285 hypothetical protein	K09156 cheF; taxis protein CheF
D      Hrr1229_004560 type IV pilin N-terminal domain-containing protein	K23255 pilA; archaeal type IV pilus assembly protein PilA
D      Hrr1229_005620 type IV pilin N-terminal domain-containing protein	K23255 pilA; archaeal type IV pilus assembly protein PilA
D      Hrr1229_013200 type IV pilin	K23255 pilA; archaeal type IV pilus assembly protein PilA
D      Hrr1229_015805 type IV pilin N-terminal domain-containing protein	K23255 pilA; archaeal type IV pilus assembly protein PilA
C    99995 Signaling proteins
D      Hrr1229_007115 carbon starvation protein A	K06200 cstA; carbon starvation protein
D      Hrr1229_006745 serine protein kinase PrkA	K07180 prkA; serine protein kinase
D      Hrr1229_011760 AAA family ATPase	K08482 kaiC; circadian clock protein KaiC
D      Hrr1229_011145 DNA-binding protein	K06875 PDCD5; programmed cell death protein 5
C    99992 Structural proteins
D      Hrr1229_001215 PGF-CTERM sorting domain-containing protein	K26284 csg; S-layer glycoprotein
C    99994 Others
D      Hrr1229_004210 phoU; phosphate signaling complex protein PhoU	K02039 phoU; phosphate transport system protein
D      Hrr1229_010630 phoU; phosphate signaling complex protein PhoU	K02039 phoU; phosphate transport system protein
D      Hrr1229_012460 phoU; phosphate signaling complex protein PhoU	K02039 phoU; phosphate transport system protein
D      Hrr1229_013815 right-handed parallel beta-helix repeat-containing protein	K07218 nosD; nitrous oxidase accessory protein
D      Hrr1229_000420 nosD; nitrous oxide reductase family maturation protein NosD	K07218 nosD; nitrous oxidase accessory protein
D      Hrr1229_011415 molybdopterin biosynthesis protein	K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D      Hrr1229_013820 nitrous oxide reductase accessory protein NosL	K19342 nosL; copper chaperone NosL
D      Hrr1229_013685 SdpI family protein	K26996 sdpI; immunity protein, SdpI family
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      Hrr1229_002670 tadA; Flp pilus assembly complex ATPase component TadA	K06865 K06865; ATPase
D      Hrr1229_014745 DEAD/DEAH box helicase	K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D      Hrr1229_004120 group 1 truncated hemoglobin	K06886 glbN; hemoglobin
D      Hrr1229_006035 sufB; Fe-S cluster assembly protein SufB	K09014 sufB; Fe-S cluster assembly protein SufB
D      Hrr1229_006040 sufD; Fe-S cluster assembly protein SufD	K09015 sufD; Fe-S cluster assembly protein SufD
D      Hrr1229_002460 metal-dependent hydrolase	K07038 K07038; inner membrane protein
D      Hrr1229_002885 metal-dependent hydrolase	K07038 K07038; inner membrane protein
D      Hrr1229_012680 TatD family hydrolase	K07049 K07049; TatD-related deoxyribonuclease
D      Hrr1229_008810 YihY/virulence factor BrkB family protein	K07058 K07058; membrane protein
D      Hrr1229_014485 fxsA; membrane protein FxsA	K07113 fxsA; UPF0716 protein FxsA
D      Hrr1229_004625 TIGR01548 family HAD-type hydrolase	K11777 K11777; HAD superfamily phosphatase
D      Hrr1229_009065 tripartite tricarboxylate transporter permease	K08971 K08971; putative membrane protein
D      Hrr1229_001110 DUF368 domain-containing protein	K08974 K08974; putative membrane protein
D      Hrr1229_003565 DUF373 family protein	K08975 K08975; putative membrane protein
D      Hrr1229_004785 DUF373 family protein	K08975 K08975; putative membrane protein
D      Hrr1229_003385 DUF420 domain-containing protein	K08976 K08976; putative membrane protein
D      Hrr1229_014370 DUF420 domain-containing protein	K08976 K08976; putative membrane protein
D      Hrr1229_015570 DUF2070 family protein	K08979 K08979; putative membrane protein
D      Hrr1229_016125 PH domain-containing protein	K08981 K08981; putative membrane protein
D      Hrr1229_000960 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_016810 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_016855 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_016960 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_016985 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_016995 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_017955 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_017965 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_018000 SHOCT domain-containing protein	K08982 K08982; putative membrane protein
D      Hrr1229_002590 hypothetical protein	K06193 phnA; protein PhnA
C    99997 Function unknown
D      Hrr1229_014095 proteasome assembly chaperone family protein	K06869 K06869; uncharacterized protein
D      Hrr1229_014320 proteasome assembly chaperone family protein	K06869 K06869; uncharacterized protein
D      Hrr1229_004775 phosphotransacetylase family protein	K06873 K06873; uncharacterized protein
D      Hrr1229_004350 HD domain-containing protein	K06885 K06885; uncharacterized protein
D      Hrr1229_013500 HD domain-containing protein	K06885 K06885; uncharacterized protein
D      Hrr1229_009520 thioredoxin domain-containing protein	K06888 K06888; uncharacterized protein
D      Hrr1229_014850 thioredoxin domain-containing protein	K06888 K06888; uncharacterized protein
D      Hrr1229_009855 alpha/beta fold hydrolase	K06889 K06889; uncharacterized protein
D      Hrr1229_013770 hypothetical protein	K06893 K06893; uncharacterized protein
D      Hrr1229_015790 CoA-binding protein	K06929 K06929; uncharacterized protein
D      Hrr1229_006180 DNA-binding protein	K06934 K06934; uncharacterized protein
D      Hrr1229_003615 YkgJ family cysteine cluster protein	K06940 K06940; uncharacterized protein
D      Hrr1229_016145 HD domain-containing protein	K06950 K06950; uncharacterized protein
D      Hrr1229_002595 metallophosphoesterase	K06953 K06953; uncharacterized protein
D      Hrr1229_003220 metallophosphoesterase	K06953 K06953; uncharacterized protein
D      Hrr1229_011460 BtpA/SgcQ family protein	K06971 K06971; uncharacterized protein
D      Hrr1229_004865 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      Hrr1229_007870 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      Hrr1229_012690 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      Hrr1229_016675 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      Hrr1229_017820 succinylglutamate desuccinylase/aspartoacylase family protein	K06987 K06987; uncharacterized protein
D      Hrr1229_000005 MMPL family transporter	K07003 K07003; uncharacterized protein
D      Hrr1229_002850 pyridoxamine 5'-phosphate oxidase family protein	K07005 K07005; uncharacterized protein
D      Hrr1229_003880 pyridoxamine 5'-phosphate oxidase family protein	K07005 K07005; uncharacterized protein
D      Hrr1229_003915 pyridoxamine 5'-phosphate oxidase family protein	K07005 K07005; uncharacterized protein
D      Hrr1229_004745 pyridoxamine 5'-phosphate oxidase family protein	K07005 K07005; uncharacterized protein
D      Hrr1229_005250 pyridoxamine 5'-phosphate oxidase family protein	K07005 K07005; uncharacterized protein
D      Hrr1229_009950 alpha/beta hydrolase	K07018 K07018; uncharacterized protein
D      Hrr1229_002170 beta-CASP ribonuclease aCPSF1	K07041 K07041; uncharacterized protein
D      Hrr1229_000255 amidohydrolase family protein	K07045 K07045; uncharacterized protein
D      Hrr1229_002580 amidohydrolase	K07045 K07045; uncharacterized protein
D      Hrr1229_017655 amidohydrolase family protein	K07045 K07045; uncharacterized protein
D      Hrr1229_003830 TatD family hydrolase	K07051 K07051; uncharacterized protein
D      Hrr1229_000155 OB-fold domain-containing protein	K07068 K07068; uncharacterized protein
D      Hrr1229_003230 hypothetical protein	K07068 K07068; uncharacterized protein
D      Hrr1229_010780 OB-fold domain-containing protein	K07068 K07068; uncharacterized protein
D      Hrr1229_002445 hypothetical protein	K07069 K07069; uncharacterized protein
D      Hrr1229_007645 TAXI family TRAP transporter solute-binding subunit	K07080 K07080; uncharacterized protein
D      Hrr1229_010430 TAXI family TRAP transporter solute-binding subunit	K07080 K07080; uncharacterized protein
D      Hrr1229_016785 permease	K07089 K07089; uncharacterized protein
D      Hrr1229_016965 permease	K07089 K07089; uncharacterized protein
D      Hrr1229_017930 permease	K07089 K07089; uncharacterized protein
D      Hrr1229_009700 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      Hrr1229_010875 sulfite exporter TauE/SafE family protein	K07090 K07090; uncharacterized protein
D      Hrr1229_012560 TSUP family transporter	K07090 K07090; uncharacterized protein
D      Hrr1229_004595 metallophosphoesterase	K07095 K07095; uncharacterized protein
D      Hrr1229_010405 YfcE family phosphodiesterase	K07095 K07095; uncharacterized protein
D      Hrr1229_011160 phosphohydrolase	K07097 K07097; uncharacterized protein
D      Hrr1229_004395 phosphoribosyltransferase	K07101 K07101; uncharacterized protein
D      Hrr1229_007410 ACT domain-containing protein	K07103 K07103; uncharacterized protein
D      Hrr1229_010885 YeeE/YedE family protein	K07112 K07112; uncharacterized protein
D      Hrr1229_010890 YeeE/YedE family protein	K07112 K07112; uncharacterized protein
D      Hrr1229_015455 YeeE/YedE family protein	K07112 K07112; uncharacterized protein
D      Hrr1229_004795 radical SAM protein	K07129 K07129; uncharacterized protein
D      Hrr1229_011270 MOSC N-terminal beta barrel domain-containing protein	K07140 K07140; MOSC domain-containing protein
D      Hrr1229_014045 DUF418 domain-containing protein	K07148 K07148; uncharacterized protein
D      Hrr1229_009000 DUF188 domain-containing protein	K07158 K07158; uncharacterized protein
D      Hrr1229_000145 proteasome assembly chaperone family protein	K07159 K07159; uncharacterized protein
D      Hrr1229_010990 VWA domain-containing protein	K07161 K07161; uncharacterized protein
D      Hrr1229_006935 hypothetical protein	K07163 K07163; uncharacterized protein
D      Hrr1229_002020 bifunctional nuclease family protein	K08999 K08999; uncharacterized protein
D      Hrr1229_005395 DUF192 domain-containing protein	K09005 K09005; uncharacterized protein
D      Hrr1229_008015 DUF192 domain-containing protein	K09005 K09005; uncharacterized protein
D      Hrr1229_014565 DUF192 domain-containing protein	K09005 K09005; uncharacterized protein
D      Hrr1229_005015 DUF99 family protein	K09120 K09120; uncharacterized protein
D      Hrr1229_003800 Mut7-C RNAse domain-containing protein	K09122 K09122; uncharacterized protein
D      Hrr1229_008540 TIGR00296 family protein	K09141 K09141; uncharacterized protein
D      Hrr1229_007205 DUF424 domain-containing protein	K09148 K09148; uncharacterized protein
D      Hrr1229_008365 DUF460 domain-containing protein	K09150 K09150; uncharacterized protein
D      Hrr1229_006335 sepF; cell division protein SepF	K09152 K09152; uncharacterized protein
D      Hrr1229_009055 DUF447 family protein	K09154 K09154; uncharacterized protein
D      Hrr1229_003525 HD domain-containing protein	K09163 K09163; uncharacterized protein
D      Hrr1229_010065 DUF1684 domain-containing protein	K09164 K09164; uncharacterized protein
D      Hrr1229_011540 DUF1684 domain-containing protein	K09164 K09164; uncharacterized protein
D      Hrr1229_016135 DUF2071 domain-containing protein	K09166 K09166; uncharacterized protein
D      Hrr1229_016130 PH domain-containing protein	K09167 K09167; uncharacterized protein
D      Hrr1229_011900 YqcI/YcgG family protein	K09190 K09190; uncharacterized protein
D      Hrr1229_000805 SRPBCC family protein	K09386 K09386; uncharacterized protein
D      Hrr1229_010960 carbon monoxide dehydrogenase	K09386 K09386; uncharacterized protein
D      Hrr1229_004620 hypothetical protein	K09713 K09713; uncharacterized protein
D      Hrr1229_002135 DUF357 domain-containing protein	K09728 K09728; uncharacterized protein
D      Hrr1229_009225 UPF0179 family protein	K09730 K09730; uncharacterized protein
D      Hrr1229_001985 DUF555 domain-containing protein	K09731 K09731; uncharacterized protein
D      Hrr1229_014185 DUF555 domain-containing protein	K09731 K09731; uncharacterized protein
D      Hrr1229_010185 coaE operon protein	K09736 K09736; uncharacterized protein
D      Hrr1229_000250 DUF371 domain-containing protein	K09738 K09738; uncharacterized protein
D      Hrr1229_006930 DUF2073 domain-containing protein	K09743 K09743; uncharacterized protein
D      Hrr1229_014335 DUF790 family protein	K09744 K09744; uncharacterized protein
D      Hrr1229_003215 hypothetical protein	K09746 K09746; uncharacterized protein
D      Hrr1229_006235 DNA-binding protein	K09746 K09746; uncharacterized protein
D      Hrr1229_007565 DUF309 domain-containing protein	K09763 K09763; uncharacterized protein
D      Hrr1229_006755 DUF444 family protein	K09786 K09786; uncharacterized protein
D      Hrr1229_001845 methytransferase partner Trm112	K09791 K09791; uncharacterized protein
D      Hrr1229_002965 sulfite exporter TauE/SafE family protein	K09792 K09792; uncharacterized protein
D      Hrr1229_013790 sulfite exporter TauE/SafE family protein	K09792 K09792; uncharacterized protein
D      Hrr1229_016510 sulfite exporter TauE/SafE family protein	K09792 K09792; uncharacterized protein
D      Hrr1229_012655 DUF456 domain-containing protein	K09793 K09793; uncharacterized protein
D      Hrr1229_010435 SIMPL domain-containing protein	K09807 K09807; uncharacterized protein
D      Hrr1229_011600 DUF2309 domain-containing protein	K09822 K09822; uncharacterized protein
D      Hrr1229_013090 DUF4870 domain-containing protein	K09940 K09940; uncharacterized protein
D      Hrr1229_007970 DUF1508 domain-containing protein	K09946 K09946; uncharacterized protein
D      Hrr1229_003815 DUF2237 domain-containing protein	K09966 K09966; uncharacterized protein
D      Hrr1229_015665 ribonuclease H-like domain-containing protein	K07502 yprB; uncharacterized protein
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#Last updated: May 16, 2024