+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Hafnia alvei

% ! ACRISPR-Cas system B Universal Cas proteins C AT03_14420 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 B Type I CRISPR-Cas system C Type I signiture cas proteins D AT03_14415 CRISPR-associated protein Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors D AT03_14410 CRISPR-associated protein K19127 csy1; CRISPR-associated protein Csy1 D AT03_14405 CRISPR-associated protein K19128 csy2; CRISPR-associated protein Csy2 D AT03_14400 CRISPR-associated protein Cas5 K19129 csy3; CRISPR-associated protein Csy3 D AT03_14395 CRISPR-associated protein Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C AT03_19440 type I restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C AT03_03825 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C AT03_19445 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C AT03_19450 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C AT03_03840 restriction endonuclease HindVIIP subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D AT03_20555 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D AT03_18005 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] B Type III R-M system B Type IV R-M system C AT03_15280 DNAse K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok D AT03_07900 small toxic polypeptide K18921 hokB; protein HokB D AT03_20390 small toxic polypeptide K18921 hokB; protein HokB C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D AT03_07720 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D AT03_03030 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D AT03_03035 antitoxin YefM K19159 yefM; antitoxin YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB D AT03_16500 gene expression modulator K05839 hha; haemolysin expression modulating protein D AT03_19070 hypothetical protein K05839 hha; haemolysin expression modulating protein D AT03_16495 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB C PspC-PspB D AT03_10330 transcriptional regulator K03973 pspC; phage shock protein C D AT03_10325 pspB; phage shock protein K03970 pspB; phage shock protein B C CcdB-CcdA D AT03_03980 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB D AT03_03975 acetoacetyl-CoA synthase K19164 ccdA; antitoxin CcdA C ParE-ParD D AT03_07835 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 C Doc-Phd C HigB-HigA D AT03_14890 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D AT03_03820 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA D AT03_20780 toxin-antitoxin system, toxin component K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin D AT03_20775 antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D AT03_19575 toxin-antitoxin biofilm protein TabA K19334 tabA; biofilm protein TabA D AT03_12780 bssS; biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS D AT03_18165 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D AT03_19720 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D AT03_02460 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D AT03_02410 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D AT03_07305 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D AT03_17075 toxin YkfI K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D AT03_03880 toxin CbtA K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D AT03_03875 Mu phage lytic protein YfjZ K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D AT03_17080 antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D AT03_04440 membrane protein K19168 cptA; toxin CptA D AT03_04435 hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C AT03_05325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023