+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Hafnia alvei
%
!
ACRISPR-Cas system
B Universal Cas proteins
C AT03_14420 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D AT03_14415 CRISPR-associated protein Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
C Subtype I-F factors
D AT03_14410 CRISPR-associated protein K19127 csy1; CRISPR-associated protein Csy1
D AT03_14405 CRISPR-associated protein K19128 csy2; CRISPR-associated protein Csy2
D AT03_14400 CRISPR-associated protein Cas5 K19129 csy3; CRISPR-associated protein Csy3
D AT03_14395 CRISPR-associated protein Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C AT03_19440 type I restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C AT03_03825 DEAD/DEAH box helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C AT03_19445 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C AT03_19450 DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C AT03_03840 restriction endonuclease HindVIIP subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D AT03_20555 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AT03_18005 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
B Type III R-M system
B Type IV R-M system
C AT03_15280 DNAse K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D AT03_07900 small toxic polypeptide K18921 hokB; protein HokB
D AT03_20390 small toxic polypeptide K18921 hokB; protein HokB
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
D AT03_07720 damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
D AT03_03030 toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D AT03_03035 antitoxin YefM K19159 yefM; antitoxin YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
D AT03_16500 gene expression modulator K05839 hha; haemolysin expression modulating protein
D AT03_19070 hypothetical protein K05839 hha; haemolysin expression modulating protein
D AT03_16495 Biofilm formation regulator YbaJ K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D AT03_10330 transcriptional regulator K03973 pspC; phage shock protein C
D AT03_10325 pspB; phage shock protein K03970 pspB; phage shock protein B
C CcdB-CcdA
D AT03_03980 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D AT03_03975 acetoacetyl-CoA synthase K19164 ccdA; antitoxin CcdA
C ParE-ParD
D AT03_07835 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
C HigB-HigA
D AT03_14890 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D AT03_03820 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
D AT03_20780 toxin-antitoxin system, toxin component K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D AT03_20775 antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D AT03_19575 toxin-antitoxin biofilm protein TabA K19334 tabA; biofilm protein TabA
D AT03_12780 bssS; biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS
D AT03_18165 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AT03_19720 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AT03_02460 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AT03_02410 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AT03_07305 gltX; glutamyl-tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
D AT03_17075 toxin YkfI K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D AT03_03880 toxin CbtA K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D AT03_03875 Mu phage lytic protein YfjZ K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D AT03_17080 antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
C CptA-CptB
D AT03_04440 membrane protein K19168 cptA; toxin CptA
D AT03_04435 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C AT03_05325 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023