+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Helicobacter cinaedi CCUG 18818 = ATCC BAA-847

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ACRISPR-Cas system B Universal Cas proteins C HCBAA847_1422 cas1; CRISPR-associated protein K15342 cas1; CRISP-associated protein Cas1 C HCBAA847_1421 cas2; CRISPR-associated protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors D HCBAA847_1665 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D HCBAA847_1665 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D HCBAA847_1665 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D HCBAA847_1665 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins D HCBAA847_1423 csn1; CRISPR-associated protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] C Subtype II-A factors C Subtype II-B factors D HCBAA847_1665 conserved hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C HCBAA847_2278 hsdR; type I restriction-modification enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C HCBAA847_0030 truncated putative type II restriction-modification enzyme K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C HCBAA847_2280 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C HCBAA847_2281 type I restriction-modification system K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C HCBAA847_0114 type I restriction enzyme modification subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases D HCBAA847_0387 conserved hypothetical protein K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] C DNA methyltransferases D HCBAA847_2198 fokI; modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D HCBAA847_1922 type II restriction-modification enzyme K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HCBAA847_2199 ulcer associated adenine specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HCBAA847_0102 ulcer associated adenine specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HCBAA847_0784 adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0785 truncated adenine specific DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0793 conserved hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0794 conserved hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0940 adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_1543 putative methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_1953 conserved hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0741 N-4/N-6 DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HCBAA847_0474 cytosine DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCBAA847_2076 type II 5-cytosoine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HCBAA847_0787 cytosine specific DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C HCBAA847_1429 restriction endonuclease EcoP15I K01156 res; type III restriction enzyme [EC:3.1.21.5] C HCBAA847_2192 type III restriction-modification enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5] C HCBAA847_2191 adenine specific DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C HCBAA847_0061 adenine-specific DNA methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C HCBAA847_1430 conserved hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D HCBAA847_1613 pemK; growth inhibitor protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D HCBAA847_1645 transcriptional modulator of MazE/toxin K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D HCBAA847_0218 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D HCBAA847_0233 hypothetical protein K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ D HCBAA847_1928 addiction module toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D HCBAA847_0037 putative addiction module toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd D HCBAA847_0039 death-on-curing family protein K07341 doc; death on curing protein C HigB-HigA C MqsR-MqsA C VapC-VapB D HCBAA847_0293 vapC; virulence-associated protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D HCBAA847_0294 vapB; putative virulence-associated protein K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D HCBAA847_1901 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D HCBAA847_2326 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D HCBAA847_0197 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HCBAA847_0430 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C HCBAA847_0475 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023