+E Transcription factors KO
#
Transcription Factors - Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D KP1_3560 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D KP1_0645 putative site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D KP1_2166 putative site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D KP1_0876 araC; arabinose operon transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D KP1_0735 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D KP1_0074 rhaR; positive regulator for rhaRS operon K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D KP1_0073 rhaS; positive regulator for rhaBAD operon K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D KP1_2266 celD; negative transcriptional regulator of cel operon K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D KP1_4030 yfeG; putative AraC-type regulatory protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D KP1_3587 ybtA; transcriptional regulator K05372 ybtA; AraC family transcriptional regulator
D KP1_0325 soxS; regulation of superoxide response regulon K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KP1_3067 soxS; regulatory protein K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KP1_2658 marA; multiple antibiotic resistance protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KP1_0813 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KP1_4202 putative helix-turn-helix AraC-type trancriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D KP1_1492 putative regulatory protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D KP1_2464 feaR; 2-phenylethylamine catabolism regulatory protein K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D KP1_0776 putative AraC-type regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D KP1_5395 putative AraC-type regulatory protein K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D KP1_0370 melR; regulator of melibiose operon K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D KP1_2198 yeaM; putative AraC-type regulatory protein K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D KP1_4467 hypothetical protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D KP1_4718 hypothetical protein K13652 K13652; AraC family transcriptional regulator
D KP1_3004 putative AraC-type trancriptional regulator K07506 K07506; AraC family transcriptional regulator
D KP1_5347 putative methylated-DNA-[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KP1_3867 ada; O6-methylguanine-DNA methyltransferase/DNA-binding transcriptional dual regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D KP1_2644 putative transcriptional regulator K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D KP1_2302 putative LysR-family bacterial regulatory protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KP1_3655 putative LysR-family bacterial regulatory protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KP1_4439 gcvA; positive regulator of gcv operon K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KP1_1534 putative LysR-family bacterial regulatory protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D KP1_0134 ilvY; transcriptional activator protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D KP1_0185 metR; regulator for metE and metH K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D KP1_0838 nhaR; LysR family transcriptional activator of cation transport K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D KP1_0115 oxyR; activator of hydrogen peroxide-inducible genes K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D KP1_4638 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D KP1_0897 leuO; leucine transcriptional activator K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D KP1_3412 tdcA; LysR family transcriptional activator for amino acids degradation K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D KP1_1357 allS; transcriptional regulator K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D KP1_3982 putative LysR-family bacterial regulatory protein K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D KP1_2312 cysB; transcriptional regulator for cysteine regulon K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D KP1_3569 transcriptional regulator of cys regulon K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D KP1_5456 dsdC; putative LysR-family transcriptional regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D KP1_2348 putative LysR-family bacterial regulatory protein K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D KP1_2572 LysR family bacterial regulatory protein for malonate utilization K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D KP1_2551 abgR; putative LysR-family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D KP1_4227 modulation protein d1 K14657 nodD; LysR family transcriptional regulator, nod-box dependent transcriptional activator
D KP1_2000 putative LysR-family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D KP1_3128 putative LysR-family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D KP1_5419 putative LysR-family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D KP1_2207 putative LysR-family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D KP1_4200 putative LysR-family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D KP1_3566 LysR-family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D KP1_3570 nitrogen assimilation control protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D KP1_3401 yjiE; putative LysR-family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D KP1_4968 yhcS; putative LysR-family transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D KP1_0124 putative LysR-family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D KP1_1833 deoR; deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D KP1_5123 glpR; repressor of the glp operon K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D KP1_2448 putative DeoR-family bacterial regulatory protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D KP1_4856 agaR; putative DeoR-type transcriptional regulator K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D KP1_2753 putative DeoR-family bacterial regulatory protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D KP1_4436 fucR; positive regulator of the fuc operon K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D KP1_2757 putative DeoR-family bacterial regulatory protein K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D KP1_4307 srlR; glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D KP1_0457 yjfQ; putative DeoR-type transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
C LacI family
D KP1_1309 transcriptional repressor of lactose catabolism K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D KP1_2640 lacI; transcriptional repressor of lactose catabolism K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D KP1_3816 galS; mgl operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_0012 rbsR; transcriptional repressor for rbs operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_0061 repressor of galETK operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_1421 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_2774 periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_2842 putative periplasmic binding protein/LacI transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_4519 galR; repressor of galETK operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_5281 xylR; putative regulator of xyl operon K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KP1_5257 putative transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D KP1_0091 cytR; DNA-binding transcriptional dual regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D KP1_0900 fruR; D-fructose-responsive transcription factor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D KP1_3762 regulator of gluconate (gnt) operon K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D KP1_1428 putative LacI-family bacterial regulatory protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D KP1_0532 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D KP1_4316 ascG; ascBF operon repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D KP1_3071 purR; purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D KP1_5136 gntR; regulator of gluconate (gnt) operon K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D KP1_2522 malI; maltose regulon regulatory protein K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D KP1_5464 putative GntR-family bacterial regulatory protein K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D KP1_2736 putative transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D KP1_1807 putative transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D KP1_0366 phnF; putative transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D KP1_1744 hutC; histidine utilization repressor C K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D KP1_3435 fadR; fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D KP1_0940 pdhR; transcriptional regulator of pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D KP1_4521 putative GntR-family regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D KP1_4820 exuR; negative regulator of exu regulon K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D KP1_5297 lldR; putative GntR-family transcriptional repressor for L-lactate utilization K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D KP1_5476 dgoR; GntR family transcriptional repressor for galactonate utilization K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D KP1_5162 putative GntR-family bacterial regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KP1_4265 putative GntR-family bacterial regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KP1_1511 putative GntR-family bacterial regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KP1_1313 putative GntR-family bacterial regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D KP1_1099 ygaE; putative transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D KP1_2612 ydfH; putative GntR-family transcriptional repressor K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
C TetR/AcrR family
D KP1_1530 betI; transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D KP1_1321 acrR; acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D KP1_5334 slmA; nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator
D KP1_2028 ycdC; hypothetical transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D KP1_3061 ydhM; hypothetical transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KP1_3577 putative TetR-family trancriptional regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KP1_p311 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D KP1_3240 putative TetR-family trancriptional regulatory protein K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D KP1_4990 envR; putative transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D KP1_2424 putative TetR-family trancriptional regulatory protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D KP1_2102 ycfQ; putative TetR/AcrR-family trancriptional regulatory protein K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D KP1_0117 yijC; putative TetR/AcrR-family trancriptional regulatory protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D KP1_1778 ybiH; putative transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D KP1_1839 ybjK; putative DeoR-type transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D KP1_0002 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D KP1_3320 putative regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KP1_1890 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KP1_1932 regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D KP1_1281 ybaO; putative LRP-like transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D KP1_p285 putative transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D KP1_3544 sdiA; LuxR/UhpA-family transcriptional activator for cell division K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D KP1_1145 ykgK; putative regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D KP1_3552 rcsA; transcriptional activator for ctr capsule biosynthesis K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D KP1_4659 putative LuxR-family bacterial regulatory protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D KP1_0778 2-component transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D KP1_5122 malT; transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D KP1_2659 marR; repressor of mar operon K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D KP1_3054 slyA; transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KP1_2492 putative MarR-family bacterial regulatory protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KP1_0711 putative MarR-family bacterial regulatory protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D KP1_4277 emrR; putative transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D KP1_4369 putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D KP1_1344 cueR; copper responsive transcription regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D KP1_5011 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D KP1_0326 soxR; redox-sensing activator of soxS K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D KP1_0683 putative transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D KP1_1730 putative MerR-family bacterial regulatory protein K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D KP1_1659 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KP1_p088 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KP1_p328 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D KP1_0287 zur; transcriptional repressor of Zn transport system K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D KP1_p079 hypothetical protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D KP1_0256 iclR; repressor of aceBA operon K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D KP1_2553 putative IclR-family transcriptional repressor K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KP1_1256 putative IclR-family bacterial regulatory protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KP1_2942 putative transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D KP1_3218 mhpR; transcriptional activator for 3-hydroxyphenylpropionate degradation K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D KP1_1360 allR; allR K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D KP1_3470 kdgR; putative IclR-family transcriptional repressor K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D KP1_5071 crp; catabolite activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D KP1_2544 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D KP1_4115 iscR; Fe-S cluster-containing transcription factor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D KP1_0449 yjeB; putative HTH-type transcriptional repressor K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D KP1_4206 putative transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
C ArsR family
D KP1_4592 arsR; ArsR family transcriptional repressor for arsenical resistance K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D KP1_3002 ydcN; putative regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D KP1_1804 mntR; putative Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D KP1_3498 yebK; predicted DNA-binding transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D KP1_0526 hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D KP1_0210 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D KP1_4989 fis; DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D KP1_0810 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D KP1_4909 nlp; regulatory factor of maltose metabolism K07724 ner; Ner family transcriptional regulator
D KP1_0609 putative cytoplasmic protein K07724 ner; Ner family transcriptional regulator
D KP1_0881 yabN; putative periplasmic binding protein of transport system K11925 sgrR; SgrR family transcriptional regulator
D KP1_0806 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D KP1_2004 putative oxidoreductase/putative regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D KP1_2713 hipB; murein or DNA biosynthesis regulatory protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D KP1_p122 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D KP1_0759 sigma-54 dependent transcriptional regulator K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D KP1_4253 prpR; putative Fis-type transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D KP1_4309 ygaA; anaerobic nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D KP1_4336 fhlA; formate hydrogen-lyase transcriptional activator K15836 fhlA; formate hydrogenlyase transcriptional activator
D KP1_1016 cdaR; transcriptional regulator for gar and gud operons K02647 cdaR; carbohydrate diacid regulator
D KP1_1719 modE; putative molybdenum transport protein K02019 modE; molybdate transport system regulatory protein
D KP1_5264 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D KP1_5440 putative helix-turn-helix protein K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D KP1_5194 nikR; nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D KP1_0094 metJ; transcriptional repressor for methionine biosynthesis K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D KP1_2030 putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D KP1_0520 relB; putative helix-turn-helix protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D KP1_3806 putative transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D KP1_3021 hypothetical protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D KP1_1298 hypothetical protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D KP1_1267 bolA; possible regulator of murein genes K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D KP1_2152 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KP1_p198 sopB; bacterial partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KP1_p173 parB; putative partitioning DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KP1_1112 transcriptional antiterminator of glycerol uptake operon K02443 glpP; glycerol uptake operon antiterminator
D KP1_0199 rfaH; transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D KP1_4961 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D KP1_1647 nagC; transcriptional repressor of genes for catabolic enzyme K02565 nagC; N-acetylglucosamine repressor
D KP1_2597 mlc; putative NAGC-like transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D KP1_5291 mtlR; repressor for mtl K02562 mtlR; mannitol operon repressor
D KP1_2770 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KP1_2847 putative ABC transporter K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KP1_2350 tyrR; transcriptional regulatory protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D KP1_1408 cadC; transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon
D KP1_4064 gcvR; transcriptional regulation of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D KP1_2483 paaX; transcriptional repressor for phenylacetic acid degradation K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D KP1_2341 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D KP1_2344 pspC; phage shock protein expression coactivator K03973 pspC; phage shock protein C
D KP1_4806 ydeW; putative SorC-family transcriptional regulator K11531 lsrR; lsr operon transcriptional repressor
D KP1_4789 dhaR; glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D KP1_1606 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D KP1_3596 alpA2; putative transcriptional regulator K07733 alpA; prophage regulatory protein
D KP1_0641 hypothetical protein K07733 alpA; prophage regulatory protein
D KP1_4657 hypothetical protein K07735 algH; putative transcriptional regulator
D KP1_0973 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D KP1_p090 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
D KP1_1231 hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D KP1_1098 crl; transcriptional regulator of cryptic csgA gene for curli surface fibers K11926 crl; sigma factor-binding protein Crl
D KP1_0903 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0