+E Transcription factors KO
#
Transcription Factors - Klebsiella quasivariicola
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D B8P98_22220 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D B8P98_10175 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D B8P98_25075 arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D B8P98_23425 arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D B8P98_24235 hpaA; 4-hydroxyphenylacetate catabolism regulatory protein HpaA K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D B8P98_27250 HTH-type transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D B8P98_27255 HTH-type transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D B8P98_16175 transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D B8P98_07795 HTH-type transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D B8P98_12520 AraC family transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_25900 AraC family transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_14350 MDR efflux pump AcrAB transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_10015 AraC family transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_06385 AraC family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_23845 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D B8P98_25975 AraC family transcriptional regulator K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D B8P98_15355 transcriptional regulator FeaR K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D B8P98_24030 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D B8P98_00400 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D B8P98_25680 transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D B8P98_16485 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D B8P98_05050 propanediol utilization protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D B8P98_03640 AraC family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D B8P98_12800 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D B8P98_00620 XRE family transcriptional regulator K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D B8P98_08615 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D B8P98_14410 transcriptional regulator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
C LysR family
D B8P98_05275 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D B8P98_09695 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D B8P98_26960 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D B8P98_26665 HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D B8P98_23720 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D B8P98_27075 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D B8P98_04045 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D B8P98_23325 transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D B8P98_10925 transcriptional regulator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D B8P98_08060 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D B8P98_15975 LysR family transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D B8P98_09785 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D B8P98_00115 DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D B8P98_15805 LysR family transcriptional regulator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D B8P98_20130 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D B8P98_14715 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D B8P98_14830 LysR family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D B8P98_18190 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D B8P98_12155 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D B8P98_00280 LysR family transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D B8P98_16450 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D B8P98_13775 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D B8P98_10085 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D B8P98_15515 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D B8P98_09780 nitrogen assimilation regulatory protein nac K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D B8P98_10975 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D B8P98_02425 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D B8P98_27005 HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D B8P98_18915 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D B8P98_01690 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D B8P98_15450 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D B8P98_03025 DeoR/GlpR transcriptional regulator K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D B8P98_05290 transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D B8P98_05955 srlR; transcriptional regulator K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D B8P98_25215 HTH-type transcriptional regulator UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
C LacI family
D B8P98_28385 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D B8P98_21380 lacI; lac repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D B8P98_14425 LacI family transcriptional regulator K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D B8P98_27600 transcriptional regulator RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_28490 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_25050 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_08880 HTH-type transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_04800 HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_13590 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_00990 xylose operon transcription regulator XylR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_27325 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D B8P98_01105 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D B8P98_27180 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D B8P98_23310 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D B8P98_24830 HTH-type transcriptional regulator TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D B8P98_05910 transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D B8P98_12500 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D B8P98_01615 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D B8P98_13045 GntR family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D B8P98_23560 transcriptional regulator K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D B8P98_14955 Mal regulon transcriptional regulator MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D B8P98_00070 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D B8P98_08165 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D B8P98_14000 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator
D B8P98_19360 GntR family transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D B8P98_25705 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D B8P98_19685 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D B8P98_26640 GntR family transcriptional regulator K11922 mngR; GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
D B8P98_10805 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D B8P98_23140 pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D B8P98_04790 transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D B8P98_03185 transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D B8P98_00860 transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D B8P98_11025 FadR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D B8P98_01495 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D B8P98_06175 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D B8P98_21360 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D B8P98_22330 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D B8P98_14545 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
D B8P98_24085 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism
C TetR/AcrR family
D B8P98_21325 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D B8P98_00670 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D B8P98_18055 pyrimidine utilization regulatory protein R K09017 rutR; TetR/AcrR family transcriptional regulator
D B8P98_12550 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D B8P98_09765 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D B8P98_02310 acrEF/envCD operon transcriptional regulator K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D B8P98_15540 TetR/AcrR family transcriptional regulator K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D B8P98_17690 TetR/AcrR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D B8P98_27065 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D B8P98_19490 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D B8P98_18885 DNA-binding transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D B8P98_27655 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D B8P98_18655 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D B8P98_11335 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D B8P98_21505 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D B8P98_10245 transcriptional regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D B8P98_22125 helix-turn-helix transcriptional regulator K21963 ecpR; LuxR family transcriptional regulator, Mat/Ecp fimbriae transcriptional regulator
D B8P98_10210 rcsA; transcriptional regulator RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D B8P98_03925 transcriptional regulator CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D B8P98_24020 helix-turn-helix transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D B8P98_01695 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D B8P98_14345 multiple antibiotic resistance transcriptional regulator MarR K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D B8P98_24330 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D B8P98_15155 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D B8P98_12585 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D B8P98_06120 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D B8P98_05645 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D B8P98_21220 cueR; HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D B8P98_02200 heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D B8P98_25895 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D B8P98_24485 helix-turn-helix-type transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D B8P98_19745 helix-turn-helix-type transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes
C Fur family
D B8P98_20120 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D B8P98_26050 transcriptional regulator Zur K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D B8P98_26235 acetate operon transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D B8P98_14820 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D B8P98_21625 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D B8P98_13125 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D B8P98_11785 transcriptional regulator K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator
D B8P98_10620 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D B8P98_00960 IclR family transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor
C CRP/FNR family
D B8P98_01930 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D B8P98_14860 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D B8P98_16905 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D B8P98_07100 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D B8P98_25280 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D B8P98_06370 transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
C ArsR family
D B8P98_28095 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D B8P98_28540 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D B8P98_28670 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D B8P98_04495 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
C XRE family
D B8P98_12810 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D B8P98_19375 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D B8P98_24860 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D B8P98_10480 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D B8P98_26475 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D B8P98_02315 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D B8P98_23860 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D B8P98_03815 DNA-binding protein K07724 ner; Ner family transcriptional regulator
D B8P98_02780 transcriptional regulator K07724 ner; Ner family transcriptional regulator
D B8P98_23400 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator
D B8P98_23880 trifunctional nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase/transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D B8P98_18175 transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D B8P98_14095 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D B8P98_16895 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D B8P98_29615 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D B8P98_28955 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D B8P98_06245 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D B8P98_05945 nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D B8P98_05815 formate hydrogenlyase transcriptional activator FlhA K15836 fhlA; formate hydrogenlyase transcriptional activator
D B8P98_09500 nifA; nif-specific transcriptional activator NifA K02584 nifA; Nif-specific regulatory protein
D B8P98_22725 carbohydrate diacid regulon transcriptional regulator CdaR K02647 cdaR; carbohydrate diacid regulator
D B8P98_08240 sigma-54-dependent Fis family transcriptional regulator K06714 rocR; arginine utilization regulatory protein
D B8P98_19800 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D B8P98_15205 transcriptional regulator K07726 K07726; putative transcriptional regulator
D B8P98_00190 transcriptional regulator K07726 K07726; putative transcriptional regulator
D B8P98_01070 transcriptional regulator K07726 K07726; putative transcriptional regulator
D B8P98_06965 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator
D B8P98_13895 transcriptional regulator K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D B8P98_01350 nickel-responsive transcriptional regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D B8P98_27165 met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D B8P98_18035 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D B8P98_24880 type II toxin-antitoxin system antitoxin, RelB/DinJ family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
D B8P98_08980 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
C Others
D B8P98_12720 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D B8P98_21430 metal/formaldehyde-sensitive transcriptional repressor K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D B8P98_21580 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D B8P98_29435 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_29540 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_19175 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_29070 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_29220 plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_17455 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D B8P98_22265 glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D B8P98_02465 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D B8P98_20190 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor
D B8P98_14620 ROK family transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene
D B8P98_00880 MltR family transcriptional regulator K02562 mtlR; mannitol operon repressor
D B8P98_13560 tenA; thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D B8P98_15795 TyrR family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D B8P98_21030 transcriptional regulator CadC K03765 cadC; transcriptional activator of cad operon
D B8P98_07370 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D B8P98_15215 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D B8P98_15840 phage shock protein operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D B8P98_15825 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C
D B8P98_03250 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor
D B8P98_03345 sigma-54-dependent Fis family transcriptional regulator K05880 dhaR; transcriptional activator for dhaKLM operon
D B8P98_20420 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D B8P98_23050 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D B8P98_09990 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D B8P98_03935 DUF179 domain-containing protein K07735 algH; putative transcriptional regulator
D B8P98_22900 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D B8P98_21740 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D B8P98_22335 Crl family RNA polymerase assembly factor K11926 crl; sigma factor-binding protein Crl
D B8P98_23300 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
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Classification taken and modified from TRANSFAC 7.0