+E Transcription factors KO #

  Transcription Factors - Legionella pneumophila Corby

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family C LysR family D LPC_1259 oxyR; hydrogen peroxide-inducible genes activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator C DeoR family C LacI family C GntR family C TetR/AcrR family D LPC_1449 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon C Lrp/AsnC family D LPC_1953 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D LPC_0901 AsnC family transcription regulator protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D LPC_0677 transcriptional regulator MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin C MerR family D LPC_0066 putative regulator, MerR family transcription regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein C Fur family D LPC_2972 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D LPC_0307 np20; transcriptional regulator np20, Fur family K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family D LPC_1571 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D LPC_1934 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family C XRE family C PadR family C Other families D LPC_1047 mecI; Methicillin resistance regulatory protein mecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D LPC_2509 birA; biotin operon repressor and biotin [acetyl CoA carboxylase] synthetase BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D LPC_0786 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LPC_1183 fis; Fis transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LPC_2758 hypothetical protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D LPC_2442 fleQ; transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D LPC_2920 yozG; transcriptional regulator, cro family K07727 K07727; putative transcriptional regulator D LPC_3184 transcriptional regulator, cro family K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D LPC_1125 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase = bifunctional PutA protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D LPC_1370 bolA; possible regulator of murein genes BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D LPC_0552 parB; chromosome partitioning protein ParB (SpoOJ) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LPC_3178 parB; chromosome partitioning protein ParB (SpoOJ) K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D LPC_2856 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D LPC_0208 Prophage CP4-57 regulatory protein alpA K07733 alpA; prophage regulatory protein D LPC_2717 transcriptional regulator K07735 algH; putative transcriptional regulator D LPC_1806 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D LPC_2566 ATP cone and Zn ribbon domains protein K07738 nrdR; transcriptional repressor NrdR D LPC_2378 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0