+F Repair protein KO
#
DNA Repair and Recombination Proteins - Ostreococcus lucimarinus
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D OSTLU_42332 predicted protein K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D OSTLU_30886 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_36787 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_41733 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_45715 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E OSTLU_94976 predicted protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E OSTLU_43811 predicted protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E OSTLU_33300 predicted protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E OSTLU_17228 predicted protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E OSTLU_36556 predicted protein K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E OSTLU_4304 predicted protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E OSTLU_43577 predicted protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E OSTLU_9118 predicted protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E OSTLU_31440 predicted protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F OSTLU_44713 predicted protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F OSTLU_26670 predicted protein K02328 POLD2; DNA polymerase delta subunit 2
F OSTLU_32665 predicted protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F OSTLU_150 predicted protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F OSTLU_42820 predicted protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F OSTLU_3761 predicted protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F OSTLU_32755 predicted protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F OSTLU_19031 predicted protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E OSTLU_41357 predicted protein K04802 PCNA; proliferating cell nuclear antigen
E OSTLU_42373 predicted protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E OSTLU_16988 predicted protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E OSTLU_34689 predicted protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other BER factors
E OSTLU_32206 predicted protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F OSTLU_19106 predicted protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F OSTLU_26154 predicted protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F OSTLU_119493 rbx1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F OSTLU_45419 predicted protein K10609 CUL4; cullin 4
F OSTLU_26305 predicted protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F OSTLU_36534 CHR3501; predicted protein K15083 RAD16; DNA repair protein RAD16
F OSTLU_27249 CHR3524; predicted protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F OSTLU_26100 predicted protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F OSTLU_13673 predicted protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F OSTLU_119616 rpb3; DNA-directed RNA polymerase II subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F OSTLU_29798 predicted protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F OSTLU_93190 predicted protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F OSTLU_36865 predicted protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F OSTLU_8797 predicted protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F OSTLU_37948 predicted protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F OSTLU_26149 predicted protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F OSTLU_12967 predicted protein K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F OSTLU_119611 rpb9; DNA-directed RNA polymerase II subunit 9, probable K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F OSTLU_88539 predicted protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F OSTLU_35735 predicted protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F OSTLU_119610 rpc10; RPC10 subunit of RNA polymerases I, II, and III, probable K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F OSTLU_119493 rbx1; RING-box protein 1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F OSTLU_45419 predicted protein K10609 CUL4; cullin 4
F OSTLU_26305 predicted protein K10610 DDB1; DNA damage-binding protein 1
F OSTLU_3307 predicted protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F OSTLU_9781 predicted protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E OSTLU_34480 predicted protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E OSTLU_26944 predicted protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E OSTLU_18495 predicted protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E OSTLU_41034 predicted protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E OSTLU_39977 predicted protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E OSTLU_37913 predicted protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E OSTLU_27487 predicted protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E OSTLU_35576 predicted protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E OSTLU_5465 predicted protein K06634 CCNH; cyclin H
E OSTLU_26522 predicted protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E OSTLU_47438 predicted protein K07466 RFA1; replication factor A1
E OSTLU_43365 predicted protein K07466 RFA1; replication factor A1
E OSTLU_51766 predicted protein K07466 RFA1; replication factor A1
E OSTLU_17803 predicted protein K10739 RFA2; replication factor A2
E OSTLU_32676 predicted protein K10740 RPA3; replication factor A3
D Other NER factors
E OSTLU_119485 ercC; NA excision repair protein ERCC-1-like protein K10849 ERCC1; DNA excision repair protein ERCC-1
E OSTLU_42450 predicted protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E OSTLU_16988 predicted protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E OSTLU_94122 predicted protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E OSTLU_33783 predicted protein K03869 CUL3; cullin 3
E OSTLU_39373 predicted protein K03872 ELOC; elongin-C
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E OSTLU_28688 predicted protein K08735 MSH2; DNA mismatch repair protein MSH2
E OSTLU_49314 predicted protein K08736 MSH3; DNA mismatch repair protein MSH3
E OSTLU_40782 predicted protein K08737 MSH6; DNA mismatch repair protein MSH6
E OSTLU_31967 predicted protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E OSTLU_51248 predicted protein K08734 MLH1; DNA mismatch repair protein MLH1
E OSTLU_432 predicted protein K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E OSTLU_44713 predicted protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E OSTLU_26670 predicted protein K02328 POLD2; DNA polymerase delta subunit 2
E OSTLU_32665 predicted protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E OSTLU_47438 predicted protein K07466 RFA1; replication factor A1
E OSTLU_43365 predicted protein K07466 RFA1; replication factor A1
E OSTLU_51766 predicted protein K07466 RFA1; replication factor A1
E OSTLU_17803 predicted protein K10739 RFA2; replication factor A2
E OSTLU_32676 predicted protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E OSTLU_30204 predicted protein K10754 RFC1; replication factor C subunit 1
E OSTLU_35082 predicted protein K10755 RFC2_4; replication factor C subunit 2/4
E OSTLU_39197 predicted protein K10755 RFC2_4; replication factor C subunit 2/4
E OSTLU_119614 rfc5; replication factor C subunit 5 (36kDa), probable K10756 RFC3_5; replication factor C subunit 3/5
E OSTLU_38748 predicted protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E OSTLU_41357 predicted protein K04802 PCNA; proliferating cell nuclear antigen
E OSTLU_13915 predicted protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E OSTLU_5620 predicted protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E OSTLU_119559 Exo1c; Exodeoxyribonuclease I K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E OSTLU_16988 predicted protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E OSTLU_33241 predicted protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E OSTLU_43144 predicted protein K10865 MRE11; double-strand break repair protein MRE11
E OSTLU_28736 predicted protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
E OSTLU_24500 predicted protein K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
D BRCA1-B complex
E OSTLU_32894 predicted protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E OSTLU_37445 predicted protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E OSTLU_31098 predicted protein K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E OSTLU_43144 predicted protein K10865 MRE11; double-strand break repair protein MRE11
E OSTLU_28736 predicted protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E OSTLU_26389 predicted protein K08775 BRCA2; breast cancer 2 susceptibility protein
E OSTLU_33041 predicted protein K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E OSTLU_33041 predicted protein K04482 RAD51; DNA repair protein RAD51
E OSTLU_50387 predicted protein K10869 RAD51L1; RAD51-like protein 1
E OSTLU_17626 predicted protein K10870 RAD51L2; RAD51-like protein 2
E OSTLU_17589 predicted protein K10871 RAD51L3; RAD51-like protein 3
E OSTLU_86836 predicted protein K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
D Rad54 family proteins
E OSTLU_16586 CHR3511; predicted protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E OSTLU_16860 CHR3513; predicted protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E OSTLU_33966 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_38991 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_38543 predicted protein K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E OSTLU_33966 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_38991 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_33842 predicted protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E OSTLU_32265 predicted protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D RPA (replication factor A)
E OSTLU_47438 predicted protein K07466 RFA1; replication factor A1
E OSTLU_43365 predicted protein K07466 RFA1; replication factor A1
E OSTLU_51766 predicted protein K07466 RFA1; replication factor A1
E OSTLU_17803 predicted protein K10739 RFA2; replication factor A2
E OSTLU_32676 predicted protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E OSTLU_12475 predicted protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E OSTLU_36487 predicted protein K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E OSTLU_14946 predicted protein K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E OSTLU_32885 predicted protein K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E OSTLU_723 predicted protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E OSTLU_29255 predicted protein K22803 SMC5; structural maintenance of chromosomes protein 5
E OSTLU_32662 predicted protein K22804 SMC6; structural maintenance of chromosomes protein 6
E OSTLU_32670 predicted protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E OSTLU_28271 predicted protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E OSTLU_13624 predicted protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E OSTLU_92534 predicted protein K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E OSTLU_32033 predicted protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E OSTLU_27712 predicted protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E OSTLU_39912 predicted protein K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E OSTLU_6399 predicted protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E OSTLU_31358 predicted protein K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E OSTLU_14443 predicted protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E OSTLU_24969 predicted protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E OSTLU_16311 predicted protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E OSTLU_43144 predicted protein K10865 MRE11; double-strand break repair protein MRE11
E OSTLU_28736 predicted protein K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E OSTLU_26493 predicted protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E OSTLU_34689 predicted protein K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E OSTLU_16020 predicted protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E OSTLU_31860 predicted protein K25792 JMJD8; jumonji domain-containing protein 8
C FA (Fanconi anemia) pathway
D FA core complex
E OSTLU_35638 predicted protein K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E OSTLU_27937 predicted protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E OSTLU_33966 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_38991 predicted protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E OSTLU_33842 predicted protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E OSTLU_32265 predicted protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
D FANCD2-I complex
D Downstream FA components
E OSTLU_26389 predicted protein K08775 BRCA2; breast cancer 2 susceptibility protein
E OSTLU_32894 predicted protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E OSTLU_37445 predicted protein K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E OSTLU_33041 predicted protein K04482 RAD51; DNA repair protein RAD51
E OSTLU_17626 predicted protein K10870 RAD51L2; RAD51-like protein 2
E OSTLU_15211 predicted protein K11137 TELO2; telomere length regulation protein
E OSTLU_42930 predicted protein K15361 WDR48; WD repeat-containing protein 48
E OSTLU_51367 predicted protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E OSTLU_42032 predicted protein K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
D Ubiquitin ligases
D Others
E OSTLU_32940 predicted protein K23314 WRAP53; telomerase Cajal body protein 1
E OSTLU_42874 predicted protein K24752 WDR70; WD repeat-containing protein 70
E OSTLU_33241 predicted protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D OSTLU_44217 predicted protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D OSTLU_3450 predicted protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D OSTLU_25113 predicted protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
C A-family DNA polymerase
C Rad6 epistasis group
D OSTLU_8844 predicted protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D OSTLU_28951 predicted protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D OSTLU_34833 predicted protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D OSTLU_38691 predicted protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D OSTLU_41357 predicted protein K04802 PCNA; proliferating cell nuclear antigen
D OSTLU_7517 predicted protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D OSTLU_13605 predicted protein K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D OSTLU_31882 predicted protein K10903 HUS1; HUS1 checkpoint protein
C HRAD17(Rad24)-RFC complex
D OSTLU_31479 predicted protein K06662 HRAD17; cell cycle checkpoint protein
D OSTLU_35082 predicted protein K10755 RFC2_4; replication factor C subunit 2/4
D OSTLU_39197 predicted protein K10755 RFC2_4; replication factor C subunit 2/4
D OSTLU_119614 rfc5; replication factor C subunit 5 (36kDa), probable K10756 RFC3_5; replication factor C subunit 3/5
D OSTLU_38748 predicted protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
C FPC (fork protection complex)
D OSTLU_119499 tim; circadian rhythm control Timeless-like protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D OSTLU_92669 predicted protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D OSTLU_15211 predicted protein K11137 TELO2; telomere length regulation protein
D OSTLU_25982 predicted protein K20403 TTI1; TELO2-interacting protein 1
D OSTLU_17567 predicted protein K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
C Other check point factors
D OSTLU_32774 predicted protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D OSTLU_51045 predicted protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D OSTLU_28301 predicted protein K06630 YWHAE; 14-3-3 protein epsilon
D OSTLU_6675 predicted protein K06630 YWHAE; 14-3-3 protein epsilon
D OSTLU_27977 predicted protein K06630 YWHAE; 14-3-3 protein epsilon
D OSTLU_88482 predicted protein K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D OSTLU_26031 predicted protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
B Other factors with a suspected DNA repair function
C DNA polymerases
D OSTLU_34768 predicted protein K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D OSTLU_15149 predicted protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D OSTLU_25104 predicted protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D OSTLU_3060 predicted protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D OSTLU_44277 predicted protein K15340 DCLRE1A; DNA cross-link repair 1A protein
C Helicases
C PSO4 complex
D OSTLU_30495 predicted protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D OSTLU_31513 predicted protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D OSTLU_16047 predicted protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D OSTLU_50173 predicted protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D OSTLU_29340 predicted protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D OSTLU_93251 predicted protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D OSTLU_28197 predicted protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D OSTLU_48569 predicted protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D OSTLU_32923 predicted protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D OSTLU_39468 predicted protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D OSTLU_30886 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_36787 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_41733 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OSTLU_45715 predicted protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E OSTLU_94976 predicted protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E OSTLU_43811 predicted protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E OSTLU_4352 predicted protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E OSTLU_43577 predicted protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E OSTLU_9118 predicted protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E OSTLU_5808 predicted protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E OSTLU_5639 predicted protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E OSTLU_34610 predicted protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E OSTLU_34610 predicted protein K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
E OSTLU_3270 predicted protein K04485 radA; DNA repair protein RadA/Sms
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F OSTLU_30508 predicted protein K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F OSTLU_36797 predicted protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D OSTLU_29340 predicted protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D OSTLU_93251 predicted protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D OSTLU_28197 predicted protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024