+F Chromosome and associated proteins KO
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Chromosome and Associated Proteins - Paenibacillus baekrokdamisoli
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AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
D Back11_36150 hypothetical protein K20798 HENMT1; small RNA 2'-O-methyltransferase [EC:2.1.1.386]
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E Back11_22510 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
D Back11_02590 fda; fructose-bisphosphate aldolase class 1 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Back11_58460 membrane protein K07192 FLOT; flotillin
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
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AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
C HU (heat unstable protein)
D Back11_23450 hupA; DNA-binding protein HU 1 K03530 hupB; DNA-binding protein HU-beta
D Back11_46830 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
C IHF (integration host factor)
C Other nucleoid associated proteins
D Back11_47290 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Back11_40570 dps; general stress protein 20U K04047 dps; starvation-inducible DNA-binding protein
D Back11_11220 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Back11_41350 ywrC; putative HTH-type transcriptional regulator YwrC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Back11_07600 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Back11_61990 lrpA_1; HTH-type transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Back11_62030 lrpA_2; HTH-type transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
B Chromosome partitioning proteins
C MukBEF complex
C Condensin-like complex
D Back11_22500 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D Back11_38410 hypothetical protein K03529 smc; chromosome segregation protein
D Back11_23920 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D Back11_23910 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
C Divisome proteins
D Back11_25620 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Back11_46800 hypothetical protein K13052 divIC; cell division protein DivIC
D Back11_52830 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Back11_21550 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Back11_25740 hypothetical protein K03586 ftsL; cell division protein FtsL
D Back11_25630 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D Back11_09690 stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D Back11_13700 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Back11_25670 spoVE; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D Back11_52840 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Back11_25610 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Back11_08090 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Back11_10190 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Back11_10200 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Back11_36100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Back11_53760 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C Inhibitors of FtsZ assembly
D Back11_05990 minC; putative septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Back11_06000 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Back11_25440 septum formation initiator K04074 divIVA; cell division initiation protein
D Back11_25470 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
C Other chromosome partitioning proteins
D Back11_05960 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D Back11_52220 mbl; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D Back11_05970 cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Back11_05980 hypothetical protein K03571 mreD; rod shape-determining protein MreD
D Back11_06010 ftsW; cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D Back11_08720 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D Back11_47380 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D Back11_19220 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Back11_47370 noc; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Back11_47390 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Back11_10330 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Back11_10320 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Back11_47350 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Back11_47360 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Back11_22290 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Back11_17720 putative integrase/recombinase y4qK K04763 xerD; integrase/recombinase XerD
D Back11_24090 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Back11_42600 hypothetical protein K11686 racA; chromosome-anchoring protein RacA
D Back11_46840 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D Back11_53770 mrp; iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Back11_51470 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Back11_56460 cell division protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Back11_05390 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D Back11_44780 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 16, 2024