+E Replication protein KO
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DNA Replication Proteins - Pseudomonas orientalis
%
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D BOP93_14230 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D BOP93_13610 multidrug DMT transporter K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D BOP93_25830 integration host factor K05787 hupA; DNA-binding protein HU-alpha
D BOP93_05050 dipicolinate synthase K03530 hupB; DNA-binding protein HU-beta
D BOP93_16110 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D BOP93_16710 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D BOP93_07845 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D BOP93_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BOP93_02500 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BOP93_23720 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BOP93_23200 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E BOP93_06160 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E BOP93_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E BOP93_05070 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E BOP93_22780 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E BOP93_19515 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E BOP93_22610 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BOP93_14225 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BOP93_23945 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E BOP93_18915 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RNase H
E BOP93_14230 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BOP93_06155 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E BOP93_00390 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E BOP93_24310 DNA ligase B K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E BOP93_18975 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E BOP93_14230 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E BOP93_06155 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
D BOP93_15125 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D BOP93_18510 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C BOP93_07805 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C BOP93_00020 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C BOP93_02325 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C BOP93_02315 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C BOP93_07475 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C BOP93_12825 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C BOP93_09455 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022