+D GENES KO
#
KEGG Orthology (KO) - Pyrococcus sp. ST04
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:pys00010]
D Py04_0350 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D Py04_0618 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D Py04_1537 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D Py04_0181 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Py04_0719 putative fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Py04_0018 putative triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Py04_1761 glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D Py04_1009 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Py04_0108 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1124 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Py04_0173 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_1551 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1554 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1550 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1553 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1410 ADP forming acetyl coenzyme A synthetase K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0710 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1720 putative succinyl-coA synthetase subunit alpha-like protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0387 putative succinyl-coA synthetase alpha subunit related protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1719 putative acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_1668 acetyl-CoA synthetase I subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0640 glyceraldehyde-3-phosphate: ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6]
D Py04_0438 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:pys00020]
D Py04_0358 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Py04_0356 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Py04_0357 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Py04_1638 3-isopropylmalate dehydrogenase K17753 HICDH; isocitrate--homoisocitrate dehydrogenase [EC:1.1.1.286]
D Py04_1551 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1554 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1550 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1553 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1549 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Py04_1552 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Py04_1555 2-oxoglutarate ferredoxin oxidoreductase, subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Py04_1574 fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Py04_1575 fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Py04_0931 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Py04_0438 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:pys00030]
D Py04_0350 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D Py04_1629 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Py04_1630 putative transketolaseN-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Py04_1212 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Py04_0376 D-arabino 3-hexulose 6-phosphate formaldehyde lyase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_1773 Ribokinase RbsK K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212]
D Py04_0275 putative translation initiation factor IF-2B subunit delta K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D Py04_0390 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Py04_0868 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Py04_1188 formaldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Py04_0091 aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Py04_0545 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Py04_0181 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Py04_0719 putative fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Py04_0618 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D Py04_1537 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
C 00040 Pentose and glucuronate interconversions [PATH:pys00040]
D Py04_0485 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Py04_0484 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Py04_0262 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:pys00051]
D Py04_1290 putative Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Py04_0857 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0870 sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Py04_1589 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Py04_0262 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Py04_0855 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D Py04_0856 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Py04_0181 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Py04_0719 putative fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Py04_0018 putative triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:pys00052]
D Py04_0524 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Py04_1669 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Py04_0484 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0550 putative beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Py04_0557 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
C 00053 Ascorbate and aldarate metabolism
D Py04_0485 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:pys00500]
D Py04_0484 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Py04_1787 putative endoglucanase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Py04_0144 glycogen synthase K20812 glgA; glycogen synthase [EC:2.4.1.242]
D Py04_1358 glycogen branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Py04_1405 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Py04_0423 4-alpha-Glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Py04_1331 trehalose synthase K13057 treT; trehalose synthase [EC:2.4.1.245]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0350 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D Py04_1290 putative Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:pys00520]
D Py04_1290 putative Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Py04_0310 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_0556 putative glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_1053 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Py04_0389 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D Py04_1510 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Py04_1511 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0484 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Py04_0485 NDP-sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Py04_0524 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Py04_1669 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Py04_0350 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D Py04_0870 sugar-phosphate nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Py04_1589 mannose-1-phosphate guanyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Py04_0857 mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:pys00620]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_1551 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1554 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1550 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1553 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1124 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Py04_0433 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Py04_1410 ADP forming acetyl coenzyme A synthetase K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0710 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1720 putative succinyl-coA synthetase subunit alpha-like protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0387 putative succinyl-coA synthetase alpha subunit related protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1719 putative acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_1668 acetyl-CoA synthetase I subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_0912 putative hydroxyacylglutathione hydrolase (glyoxalase II) K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Py04_0982 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Py04_0757 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Py04_0931 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Py04_1574 fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Py04_1575 fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Py04_0074 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Py04_0438 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D Py04_0173 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0849 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Py04_0853 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:pys00630]
D Py04_0358 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Py04_0356 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0191 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Py04_0199 methylmalony-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Py04_1276 methylmalonyl-CoA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Py04_0612 glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Py04_0564 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Py04_1333 phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18]
D Py04_1155 ribulose bisophosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_1543 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Py04_0052 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Py04_0051 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Py04_0944 putative glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Py04_1265 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D Py04_0545 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:pys00640]
D Py04_1410 ADP forming acetyl coenzyme A synthetase K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0710 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1720 putative succinyl-coA synthetase subunit alpha-like protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0387 putative succinyl-coA synthetase alpha subunit related protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1719 putative acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_1668 acetyl-CoA synthetase I subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_1327 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1388 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0695 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0191 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Py04_0199 methylmalony-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Py04_1276 methylmalonyl-CoA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
C 00650 Butanoate metabolism [PATH:pys00650]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0757 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Py04_0758 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Py04_0759 putative Methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Py04_0947 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D Py04_1327 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1388 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0695 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_1551 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1554 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1550 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1553 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1083 putative 3-hydroxy-3-methylglutaryl CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D Py04_0847 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Py04_0997 putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:pys00660]
D Py04_0847 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Py04_0997 putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Py04_0850 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Py04_1640 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Py04_0851 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Py04_1639 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Py04_0852 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:pys00562]
D Py04_0033 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Py04_1492 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Py04_1010 putative glucose-1-phosphate thymidylyltransferase-like protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D Py04_0018 putative triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:pys00190]
D Py04_1304 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Py04_1305 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Py04_1306 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Py04_1303 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Py04_1307 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Py04_1302 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Py04_0333 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Py04_0334 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Py04_0331 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Py04_0335 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Py04_0330 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Py04_0332 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Py04_0327 V-type ATP synthase subunit H K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D Py04_0328 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Py04_0329 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Py04_0408 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes [PATH:pys00720]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_0173 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Py04_0074 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Py04_0931 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D Py04_1574 fumarate hydratase (fumarase) alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Py04_1575 fumarate hydratase (fumarase) beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_1551 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1554 2-oxoglutarate ferredoxin oxidoreductase subunit alpha K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Py04_1550 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1553 2-oxoglutarate ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Py04_1549 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Py04_1552 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Py04_1555 2-oxoglutarate ferredoxin oxidoreductase, subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Py04_0357 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Py04_0356 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Py04_0191 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Py04_1276 methylmalonyl-CoA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Py04_0199 methylmalony-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
C 00680 Methane metabolism [PATH:pys00680]
D Py04_1234 putative formate dehydrogenase alpha subunit related protein K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6]
D Py04_1543 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Py04_0545 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_0074 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Py04_0181 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D Py04_0719 putative fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Py04_0618 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D Py04_1537 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D Py04_0376 D-arabino 3-hexulose 6-phosphate formaldehyde lyase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Py04_0173 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D Py04_0108 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Py04_1357 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Py04_0019 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Py04_1152 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00910 Nitrogen metabolism [PATH:pys00910]
D Py04_1480 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_0009 putative oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_1734 putative glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_0990 putative glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_0751 putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:pys00920]
D Py04_0470 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Py04_0466 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Py04_0494 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Py04_0187 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Py04_1131 cytochrome-c3 hydrogenase subunit gamma K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D Py04_0891 cytochrome-c3 hydrogenase subunit gamma K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4]
D Py04_1132 cytochrome-c3 hydrogenase beta chain K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D Py04_0890 cytochrome-c3 hydrogenase beta chain K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4]
D Py04_0893 cytochrome-c3 hydrogenase alpha chain K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D Py04_1129 cytochrome-c3 hydrogenase alpha chain K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5]
D Py04_0892 cytochrome-c3 hydrogenase subunit delta K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D Py04_1130 cytochrome-c3 hydrogenase subunit delta K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5]
D Py04_0899 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:pys00061]
D Py04_0301 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:pys00071]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:pys00561]
D Py04_0545 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Py04_0043 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
C 00564 Glycerophospholipid metabolism [PATH:pys00564]
D Py04_0042 anaerobic glycerol 3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Py04_0044 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Py04_1369 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
D Py04_0956 geranylgeranylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41]
D Py04_0089 prenyltransferase UbiA-like protein K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42]
D Py04_0654 hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67]
D Py04_0252 putative 43 kDa subunit bacteriochlorophyll synthase-like protein K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D Py04_0550 putative beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:pys00230]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_0390 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Py04_0306 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Py04_0507 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Py04_0512 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D Py04_0353 hosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Py04_0351 phosphoribosylformylglycinamidine synthase subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Py04_0352 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Py04_0513 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Py04_0510 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Py04_0511 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Py04_0305 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Py04_0766 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Py04_1238 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D Py04_0506 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23]
D Py04_0435 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Py04_0843 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Py04_0397 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Py04_1239 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Py04_1240 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Py04_1066 5'-methylthioadenosine phosphorylase K26211 K26211; guanosine phosphorylase [EC:2.4.2.15]
D Py04_0515 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Py04_0081 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Py04_1745 putative adenylyl cyclase, CyaB-type K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D Py04_1050 putative adenylyl cyclase, CyaB-type K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D Py04_0626 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Py04_1485 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D Py04_1169 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_1682 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_0813 putative AMP/CMP kinase K18532 AK6; adenylate kinase [EC:2.7.4.3]
D Py04_0684 putative Nucleoside-triphosphatase THEP1 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Py04_0129 Histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Py04_0789 hypothetical protein containing Histidine triad (HIT) domain K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Py04_0466 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Py04_0494 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Py04_0470 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Py04_0751 putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:pys00240]
D Py04_1601 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Py04_1602 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Py04_0743 putative aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Py04_0742 putative aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Py04_0343 putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Py04_1409 dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Py04_0342 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Py04_0951 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Py04_0734 putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Py04_1344 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Py04_0843 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Py04_0372 putative Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Py04_1721 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Py04_1192 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Py04_1228 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Py04_1485 thymidine phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57]
D Py04_0081 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Py04_0054 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Py04_0515 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Py04_1476 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Py04_1587 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:pys00250]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0073 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Py04_1643 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Py04_1091 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Py04_0141 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Py04_0296 L-asparagine amidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Py04_1033 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Py04_1260 alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Py04_0362 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Py04_0363 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Py04_0626 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Py04_0766 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Py04_0743 putative aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Py04_0742 putative aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D Py04_1327 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1388 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0695 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0009 putative oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_1734 putative glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_0990 putative glutamate synthase (NADPH/NADH) small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Py04_1480 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_1601 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Py04_1602 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Py04_0352 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Py04_0310 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_0556 putative glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_0306 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:pys00260]
D Py04_1004 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1005 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1008 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Py04_0786 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Py04_1006 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Py04_1520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1345 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1007 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1543 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Py04_0545 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Py04_0108 cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Py04_1357 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Py04_0019 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Py04_0416 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Py04_1102 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Py04_0052 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Py04_0051 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Py04_0944 putative glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Py04_1265 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D Py04_1610 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Py04_1609 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Py04_1470 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:pys00270]
D Py04_0896 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Py04_0897 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Py04_1751 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Py04_0215 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Py04_0280 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Py04_0235 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D Py04_1408 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Py04_1179 translation initiation factor IF-2 K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Py04_0115 cytosine-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Py04_0585 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Py04_0127 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D Py04_1004 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1005 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1008 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Py04_0786 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Py04_0899 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_1357 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Py04_0575 putative parB-like nuclease K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226]
C 00280 Valine, leucine and isoleucine degradation [PATH:pys00280]
D Py04_1080 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7]
D Py04_1079 2-ketoisovalerate ferredoxin oxidoreductase subunit beta K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1081 2-ketoisovalerate ferredoxin oxidoreductase subunit delta K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7]
D Py04_0191 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Py04_0199 methylmalony-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Py04_1276 methylmalonyl-CoA mutase, subunit alpha K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_1083 putative 3-hydroxy-3-methylglutaryl CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:pys00290]
D Py04_0850 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Py04_1640 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Py04_0851 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Py04_1639 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Py04_0852 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Py04_0847 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Py04_0997 putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Py04_0848 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Py04_0854 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Py04_1260 alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Py04_0849 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Py04_0853 alpha-isopropylmalate/homocitrate synthase family transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:pys00300]
D Py04_0786 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Py04_1004 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1005 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1008 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Py04_1638 3-isopropylmalate dehydrogenase K17753 HICDH; isocitrate--homoisocitrate dehydrogenase [EC:1.1.1.286]
D Py04_0274 aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Py04_1642 aspartate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Py04_1637 putative Lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Py04_0364 putative ribosomal protein s6 modification protein K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D Py04_1636 putative Lysine biosynthesis enzyme LysX K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D Py04_1634 acetylglutamate/acetylaminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Py04_1635 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Py04_1633 acetylornithine/acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Py04_1632 acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00310 Lysine degradation
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:pys00220]
D Py04_0738 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Py04_0362 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Py04_0363 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Py04_0352 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_1480 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Py04_0751 putative carbamate kinase-like protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_1260 alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Py04_0933 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D Py04_1637 putative Lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Py04_1636 putative Lysine biosynthesis enzyme LysX K25032 K25032; alpha-aminoadipate-LysW ligase/glutamate-LysW ligase [EC:6.3.2.43 6.3.2.60]
D Py04_1634 acetylglutamate/acetylaminoadipate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Py04_1635 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Py04_1633 acetylornithine/acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Py04_1632 acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:pys00330]
D Py04_1496 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Py04_0682 arginase like protein, Ureohydrolase family K01480 speB; agmatinase [EC:3.5.3.11]
D Py04_0182 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Py04_0280 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Py04_0215 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Py04_0779 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Py04_1600 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:pys00340]
D Py04_1657 ATP phosphoribosyltransferase catalytic subunit HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Py04_1658 putative histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Py04_1650 putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase His IE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Py04_1652 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Py04_1653 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Py04_1651 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Py04_1655 imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1656 histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:pys00350]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1152 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00360 Phenylalanine metabolism [PATH:pys00360]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_0779 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:pys00380]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0779 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pys00400]
D Py04_1627 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Py04_1626 putative 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D Py04_1625 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Py04_1624 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Py04_1616 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Py04_1615 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Py04_1606 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Py04_1607 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Py04_1605 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Py04_1608 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Py04_1604 indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Py04_1610 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Py04_1609 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Py04_1470 tryptophan synthase subunit beta K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Py04_1612 Prephenate dehydrogenase (pdh) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Py04_0178 putative prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:pys00410]
D Py04_1152 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
D Py04_1327 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1388 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0695 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1364 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
D Py04_1494 putative phosphonate matabolism protein PhnP-like protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:pys00450]
D Py04_0899 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Py04_0896 methionine synthase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Py04_0897 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Py04_0315 putative nifS protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Py04_1326 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Py04_0470 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Py04_0988 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:pys00460]
D Py04_0141 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Py04_0296 L-asparagine amidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Py04_1543 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:pys00470]
D Py04_0352 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Py04_1643 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Py04_1091 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 00480 Glutathione metabolism [PATH:pys00480]
D Py04_0970 putative LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Py04_0357 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Py04_0280 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:pys00511]
D Py04_0550 putative beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Py04_1184 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:pys00543]
D Py04_0639 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:pys00730]
D Py04_0935 phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D Py04_1270 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1717 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1231 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]
D Py04_0937 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Py04_0936 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Py04_1764 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Py04_0684 putative Nucleoside-triphosphatase THEP1 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Py04_1169 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_1682 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_0940 putative transcriptional activator 2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D Py04_0939 putative transcriptional activator 1 K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:pys00740]
D Py04_1099 CTP-dependent archaeal riboflavin kinase K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D Py04_0732 glycerol-3-phosphate cytidyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2]
D Py04_0937 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Py04_1048 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:pys00750]
D Py04_1520 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1345 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1007 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Py04_1232 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Py04_1233 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:pys00760]
D Py04_0073 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Py04_0072 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Py04_0071 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Py04_0007 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Py04_0646 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
D Py04_0253 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Py04_0787 pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Py04_1164 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Py04_0785 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Py04_0947 arylmalonate decarboxylase K01799 nicE; maleate isomerase [EC:5.2.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:pys00770]
D Py04_0847 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Py04_0997 putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Py04_0848 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Py04_0854 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Py04_0962 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Py04_1355 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Py04_1757 putative GHMP kinase K06982 pok; pantoate kinase [EC:2.7.1.169]
D Py04_1364 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36]
D Py04_1308 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Py04_0773 phosphopantetheine adenylyltransferase K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Py04_0560 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Py04_0405 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237]
D Py04_1152 L-tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11]
C 00780 Biotin metabolism [PATH:pys00780]
D Py04_0301 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Py04_0160 putative Biotin protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:pys00785]
D Py04_1153 hypothetical protein K09711 lipS1; lipoyl synthase
D Py04_0298 putative biotin synthase K24689 lipS2; lipoyl synthase
D Py04_1377 putative lipoate-protein ligase a-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Py04_0052 glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Py04_0051 glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Py04_0944 putative glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Py04_1265 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:pys00790]
D Py04_0375 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Py04_1119 putative organic radical activating enzyme, radical SAM superfamily K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Py04_0177 putative queuosine biosynthesis QueC-like ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Py04_1714 GTP cyclohydrolase K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39]
D Py04_0837 hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Py04_0291 GHMP kinase group 1 K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D Py04_0969 hypothetical protein containing GHMP kinase domain K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54]
D Py04_1198 putative metallo-beta-lactamase superfamily hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Py04_1205 putative metallo-beta-lactamase superfamily hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Py04_1120 6-pyruvoyl-tetrahydropterin synthase K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59]
D Py04_0245 putative molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Py04_1737 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Py04_0255 putative molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Py04_0565 putative molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Py04_1538 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Py04_1042 putative molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Py04_0976 putative molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:pys00670]
D Py04_1543 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Py04_0944 putative glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:pys00860]
D Py04_1579 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Py04_0006 hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D Py04_1045 putative tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein K22226 ahbC; Fe-coproporphyrin III synthase
D Py04_1090 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Py04_0150 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Py04_0447 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Py04_0446 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Py04_0453 hypothetical protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62]
D Py04_0451 putative cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
D Py04_1048 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:pys00900]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_1083 putative 3-hydroxy-3-methylglutaryl CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D Py04_1729 3-hydroxy-3-methylglutaryl coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D Py04_1518 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D Py04_1517 acetylglutamate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26]
D Py04_0662 hypothetical protein containing DUF521 domain K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182]
D Py04_0661 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182]
D Py04_0819 hypothetical protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126]
D Py04_1048 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Py04_1060 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Py04_0783 putative bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Py04_1477 putative undecaprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Py04_1629 putative transketolase C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Py04_1630 putative transketolaseN-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:pys00523]
D Py04_0455 Sugar-phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0479 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0389 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D Py04_0480 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Py04_0481 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Py04_0482 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:pys01054]
D Py04_1643 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Py04_1091 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Py04_0480 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:pys00261]
D Py04_0470 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Py04_1004 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1005 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Py04_1008 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:pys00521]
D Py04_0858 phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Py04_1492 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Py04_0033 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Py04_0455 Sugar-phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0479 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0389 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D Py04_0480 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Py04_0481 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Py04_0482 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:pys00525]
D Py04_0455 Sugar-phosphate nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0479 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Py04_0389 glucose-1-phosphate thymidylyltransferase K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D Py04_0480 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:pys00401]
D Py04_1612 Prephenate dehydrogenase (pdh) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Py04_1606 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Py04_1607 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Py04_0301 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:pys00999]
D Py04_1751 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Py04_1625 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:pys00362]
D Py04_0757 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Py04_0758 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Py04_0759 putative Methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:pys00627]
D Py04_0779 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Py04_0433 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Py04_1048 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D Py04_0641 putative 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D Py04_0641 putative 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D Py04_1077 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Py04_1076 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Py04_1082 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1]
D Py04_1078 pyuvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:pys00643]
D Py04_0779 putative formamidase (formamide amidohydrolase) K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:pys03020]
D Py04_1440 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D Py04_1439 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D Py04_1438 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D Py04_1528 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D Py04_0116 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D Py04_0407 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D Py04_0953 putative DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D Py04_1441 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D Py04_1523 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D Py04_1524 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D Py04_0038 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C 03022 Basal transcription factors [PATH:pys03022]
D Py04_0528 Transcription initiation factor B K03124 TFIIB; transcription initiation factor TFIIB
D Py04_1374 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D Py04_0907 transcription factor (TATA-box-binding protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Py04_0673 transcription initiation factor E subunit alpha K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D Py04_0845 DNA repair helicase rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:pys03010]
D Py04_1521 rpsB, small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Py04_1701 rpsC, small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Py04_1530 rpsD, small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Py04_1686 rpsE, small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Py04_1434 rpsG, small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Py04_1691 rpsH, small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Py04_1525 rpsI, small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Py04_1375 rpsJ, small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Py04_1529 rpsK, small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Py04_1435 rpsL, small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Py04_1531 rpsM, small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Py04_1692 rpsN, small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Py04_0130 rpsO, small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Py04_1697 rpsQ, small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Py04_1703 rpsS, small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Py04_0133 RPS3A, small subunit ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D Py04_1694 RPS4, small subunit ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D Py04_0670 RPS6, small subunit ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D Py04_1031 RPS8, small subunit ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D Py04_1266 RPS17, small subunit ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D Py04_1258 RPS19, small subunit ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D Py04_0404 RPS24, small subunit ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e
D Py04_0374 RPS27, small subunit ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D Py04_0403 RPS27A, small subunit ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Py04_1382 RPS28, small subunit ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e
D Py04_0058 rplA, large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Py04_1704 rplB, large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Py04_1707 rplC, large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Py04_1693 rplE, large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Py04_1690 rplF, large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Py04_0057 rplJ, large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Py04_0059 rplK, large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Py04_0056 rpl12, large subunit ribosomal protein L12 K02869 RP-L12; large subunit ribosomal protein L12
D Py04_1526 rplM, large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Py04_1696 rplN, large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Py04_1684 rplO, large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Py04_1687 rplR, large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Py04_1702 rplV, large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Py04_1705 rplW, large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Py04_1695 rplX, large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Py04_1700 rpmC, large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Py04_1685 rpmD, large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Py04_1706 RPL4, large subunit ribosomal protein L4e K02930 RP-L4e; large subunit ribosomal protein L4e
D Py04_1383 RPL7A, large subunit ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Py04_1121 RPL10, large subunit ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e
D Py04_1191 RPL14, large subunit ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D Py04_0878 RPL15, large subunit ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D Py04_1527 RPL18, large subunit ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D Py04_1688 RPL19, large subunit ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D Py04_0952 RPL21, large subunit ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D Py04_1381 RPL24, large subunit ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D Py04_1437 RPL30, large subunit ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D Py04_0571 RPL31, large subunit ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D Py04_1689 RPL32, large subunit ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D Py04_1193 RPL34, large subunit ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D Py04_1760 RPL35A, large subunit ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D Py04_1411 RPL37, large subunit ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e
D Py04_0039 RPL37A, large subunit ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D Py04_0572 RPL39, large subunit ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D Py04_1278 RPL40, large subunit ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Py04_0373 RPL44, large subunit ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D Py04_0569 rplX, large subunit ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX
D Py04_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Py04_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Py04_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Py04_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:pys00970]
D Py04_t0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Py04_t0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Py04_t0031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Py04_t0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Py04_t0009 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Py04_t0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Py04_t0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Py04_t0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0001 tRNA-His K14226 tRNA-His; tRNA His
D Py04_t0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Py04_t0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Py04_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Py04_t0008 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Py04_t0003 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Py04_t0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Py04_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_t0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_t0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_1579 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Py04_1286 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D Py04_1285 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D Py04_0421 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0153 putative alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0338 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_1128 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0871 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Py04_0307 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_0188 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_1498 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Py04_1181 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Py04_1186 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Py04_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Py04_0988 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Py04_0440 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Py04_0889 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Py04_0776 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Py04_0288 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Py04_1371 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Py04_0905 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Py04_0415 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Py04_1100 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Py04_1101 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Py04_1051 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Py04_0393 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:pys03060]
D Py04_1683 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Py04_0325 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Py04_0324 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Py04_1586 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Py04_1556 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D Py04_0061 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D Py04_1784 signal recognition particle protein Srp19 K03105 SRP19; signal recognition particle subunit SRP19
D Py04_0840 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Py04_0605 putative signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Py04_0617 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:pys04122]
D Py04_0255 putative molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D Py04_0245 putative molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Py04_1043 putative molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Py04_1044 putative molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Py04_1483 putative molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D Py04_0128 putative Thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Py04_1737 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Py04_0565 putative molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Py04_1270 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1717 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1019 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D Py04_1032 hypothetical protein containing JAB1/MPN domain K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome [PATH:pys03050]
D Py04_0269 putative Proteasome regulatory ATPase K03420 psmR; proteasome regulatory subunit
D Py04_1447 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Py04_1347 putative proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Py04_0312 proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:pys03018]
D Py04_0118 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D Py04_1445 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D Py04_1443 putative exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42
D Py04_1444 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_0781 putative Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:pys03030]
D Py04_1590 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Py04_1540 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Py04_0368 DNA-dependent DNA polymerase family B protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Py04_0237 DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D Py04_0238 DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D Py04_0664 putative MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D Py04_0263 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D Py04_0264 DNA primase large subunit K18882 priL; DNA primase large subunit
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_0247 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D Py04_0246 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03410 Base excision repair [PATH:pys03410]
D Py04_1385 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Py04_0693 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Py04_1366 hypothetical protein containing Uracil-DNA glycosylase like domain K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Py04_0409 endonuclease IV like protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Py04_0131 Phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03420 Nucleotide excision repair [PATH:pys03420]
D Py04_0845 DNA repair helicase rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03430 Mismatch repair [PATH:pys03430]
D Py04_0629 DNA mismatch recognition protein K07456 mutS2; DNA mismatch repair protein MutS2
D Py04_0131 Phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C 03440 Homologous recombination
D Py04_0131 Phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C 03450 Non-homologous end-joining
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
D Py04_0406 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Py04_0060 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:pys02010]
D Py04_0157 molybdate/tungstate transport system substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Py04_0156 molybdate/tungstate transport system permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D Py04_0155 molybdate/tungstate transport system ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Py04_1237 putative thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D Py04_1235 iron(III) ABC transporter permease K02063 thiP; thiamine transport system permease protein
D Py04_1236 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Py04_1332 maltose ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_0082 maltose/maltodextrin transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_1508 sugar ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_0206 putative malE-like sugar binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Py04_0207 maltodextrin transport system permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Py04_0208 malg-like sugar transport inner membrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Py04_1623 putative membrane lipoprotein (tmpc) K07335 bmpA; basic membrane protein A and related proteins
D Py04_1621 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein
D Py04_1620 ribose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Py04_1622 ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D Py04_0273 perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Py04_0272 putative ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein
D Py04_0271 maltose transport system permease K17239 inoG; inositol-phosphate transport system permease protein
D Py04_0270 maltose/maltodextrin transport ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Py04_0096 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D Py04_0230 ABC-type cobalt transport system, permease K16785 ecfT; energy-coupling factor transport system permease protein
D Py04_1743 putative cobalt transport ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Py04_0229 cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Py04_0914 permease K16905 K16905; fluoroquinolone transport system permease protein
D Py04_0915 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein
D Py04_0916 multidrug ABC transporter ATPase K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:pys03070]
D Py04_0325 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Py04_0324 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Py04_1683 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Py04_1556 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D Py04_1586 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:pys02020]
D Py04_1594 putative ATP:dephospho-CoA triphosphoribosyl transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D Py04_0982 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0534 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Py04_0533 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0541 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0630 methyl-accepting chemotaxis-like protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_1778 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0532 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D Py04_0537 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Py04_0535 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Py04_0536 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Py04_1510 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Py04_1511 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D Py04_1787 putative endoglucanase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:pys02024]
D Py04_1606 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Py04_1607 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Py04_0995 hypothetical protein K20276 bapA; large repetitive protein
D Py04_0551 putative dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_1343 dipeptide ABC transporter dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_0344 putative peptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_1018 dipeptide ABC transporter dipeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_0552 putative dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_1342 dipeptide transport system permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_0345 oligopeptide transport system permease appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_1017 dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_0553 putative oligopeptide transport system permease AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_1341 dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_0346 oligopeptide transport system permease appC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_1016 dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_0554 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_0347 ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1015 dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1340 peptide ABC transporter atp-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1339 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Py04_0348 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Py04_1683 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Py04_1556 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D Py04_1586 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:pys02030]
D Py04_0533 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0541 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0630 methyl-accepting chemotaxis-like protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_1778 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0537 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Py04_0532 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D Py04_0535 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Py04_0538 Chemotaxis protein CheC 1 K03410 cheC; chemotaxis protein CheC
D Py04_0539 Chemotaxis protein CheC 2 K03410 cheC; chemotaxis protein CheC
D Py04_0536 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Py04_0540 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Py04_0534 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
C 02040 Flagellar assembly
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:pys04980]
D Py04_1090 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Py04_0198 lysine arginine ornithine transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:pys01000]
C 01001 Protein kinases [BR:pys01001]
D Py04_0631 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D Py04_1457 putative serine/threonine protein kinase, rio1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Py04_0558 hypothetical protein containing RIO-like kinase domain K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D Py04_0537 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:pys01009]
D Py04_0663 translation initiation factor IF-2 K03238 EIF2S2; translation initiation factor 2 subunit 2
D Py04_0585 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Py04_0019 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:pys01002]
D Py04_0633 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D Py04_1086 hypothetical protein containing HybD-like domain K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Py04_0975 putative hydrogenase maturation protease HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Py04_0964 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D Py04_1239 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Py04_1240 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Py04_0306 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Py04_0310 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_0556 putative glucosamine-6-phosphate deaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Py04_1033 asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Py04_1596 intracellular protease K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27]
D Py04_1727 hypothetical protein K07052 K07052; CAAX protease family protein
D Py04_0875 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Py04_1041 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Py04_0946 cobalt-dependent proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Py04_1003 putative X-pro dipeptidase-like protein (pepQ) K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Py04_0648 thermostable carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Py04_1418 M42 family glutamyl aminopeptidase, de-blocking aminopeptidase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D Py04_1747 putative aminopeptidase/endoglucanase K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D Py04_0814 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Py04_1475 putative Heat shock protein/Zn-dependent protease with chaperone function M48 family K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Py04_1746 putative archaemetzincin-like protein K06974 amzA; archaemetzincin [EC:3.4.-.-]
D Py04_1715 putative Zinc metallopeptidase K06974 amzA; archaemetzincin [EC:3.4.-.-]
D Py04_1469 putative dipeptide transport protein dppA K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Py04_0138 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D Py04_0152 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D Py04_1195 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D Py04_0637 ATP-dependent protease La K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D Py04_0605 putative signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Py04_0617 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Py04_1459 putative protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D Py04_1447 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Py04_1347 putative proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Py04_0312 proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Py04_0296 L-asparagine amidohydrolase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D Py04_1039 putative PmbA like protein K03592 pmbA; PmbA protein
D Py04_1450 putative PmbA like protein K03592 pmbA; PmbA protein
D Py04_1038 putative TidD like protein K03568 tldD; TldD protein
D Py04_1449 putative TidD like protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:pys01003]
D Py04_0658 UDP-N-acetylglucosamine-dolichyl-phosphate N-AceGluNH-phosphotransferase K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]
D Py04_0457 putative glycosyl transferase family 2 protein K23684 aglJ; dolichol-phosphate hexosyltransferase [EC:2.4.1.-]
D Py04_0456 Oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D Py04_0309 Oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D Py04_0124 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Py04_0639 glycosyltransferase family 2 protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D Py04_0855 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:pys01005]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:pys01011]
C 01004 Lipid biosynthesis proteins [BR:pys01004]
D Py04_0301 short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Py04_1410 ADP forming acetyl coenzyme A synthetase K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0710 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1720 putative succinyl-coA synthetase subunit alpha-like protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_0387 putative succinyl-coA synthetase alpha subunit related protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13]
D Py04_1719 putative acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
D Py04_1668 acetyl-CoA synthetase I subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13]
C 01008 Polyketide biosynthesis proteins [BR:pys01008]
D Py04_1643 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D Py04_1091 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:pys01006]
D Py04_0783 putative bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
C 01007 Amino acid related enzymes [BR:pys01007]
D Py04_0288 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Py04_1579 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Py04_1051 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Py04_0393 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Py04_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Py04_1371 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Py04_0988 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Py04_0776 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Py04_0440 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Py04_0889 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Py04_0871 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Py04_0307 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_0188 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_0415 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Py04_1498 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Py04_1186 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Py04_0905 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Py04_1181 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Py04_0421 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0153 putative alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0338 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_1128 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_1100 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Py04_1101 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Py04_1613 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_0704 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Py04_1260 alanine aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Py04_1216 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D Py04_0445 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_1649 putative histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Py04_0416 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Py04_1633 acetylornithine/acetyl-lysine aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Py04_1327 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_1388 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Py04_0695 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:pys03000]
D Py04_0115 cytosine-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Py04_0907 transcription factor (TATA-box-binding protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Py04_1413 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Py04_1479 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Py04_1387 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D Py04_0120 transcriptional regulator, Lrp-AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Py04_0398 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Py04_0136 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Py04_0095 transcriptional regulator, ArsR family K07721 K07721; ArsR family transcriptional regulator
D Py04_0250 putative transcriptional regulator K07721 K07721; ArsR family transcriptional regulator
D Py04_1672 transcriptional regulator, ArsR family K07721 K07721; ArsR family transcriptional regulator
D Py04_0745 hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator
D Py04_1277 putative transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Py04_0727 putative transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Py04_1570 transcriptional regulator, ParR family K10947 K10947; PadR family transcriptional regulator
D Py04_1064 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Py04_0160 putative Biotin protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Py04_0414 putative transcription regulator, MarR family K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D Py04_0277 putative Transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Py04_0679 Transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Py04_1289 putative Maltose-specific transcriptional repressor TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Py04_1504 transcriptional regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Py04_0714 putative transcriptional regulator K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator
D Py04_0800 CRISPR locus-related DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3
D Py04_1733 putative HTH-type transcriptional regulatory protein K07728 K07728; putative transcriptional regulator
D Py04_1425 transcription regulator protein HTH-type K07729 K07729; putative transcriptional regulator
D Py04_1365 putative transcriptional regulator, XRE family K07731 K07731; putative transcriptional regulator
D Py04_0609 transcription nickel responsive regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D Py04_0940 putative transcriptional activator 2 K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 03021 Transcription machinery [BR:pys03021]
D Py04_0528 Transcription initiation factor B K03124 TFIIB; transcription initiation factor TFIIB
D Py04_1374 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D Py04_0907 transcription factor (TATA-box-binding protein) K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D Py04_0673 transcription initiation factor E subunit alpha K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D Py04_0845 DNA repair helicase rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Py04_0406 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Py04_0060 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5
D Py04_0666 GTPase K24104 GPN; GPN-loop GTPase
D Py04_1436 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA
D Py04_1439 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D Py04_1438 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D Py04_1440 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6]
D Py04_1528 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D Py04_0407 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D Py04_0953 putative DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D Py04_1441 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D Py04_1523 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D Py04_0116 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D Py04_1524 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D Py04_0038 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D Py04_1096 DNA-directed RNA polymerase subunit M K03057 tfs; transcription factor S
C 03019 Messenger RNA biogenesis [BR:pys03019]
D Py04_0406 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
D Py04_0060 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5
D Py04_1770 cell division protein CDC48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1074 putative cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1372 cell division protein pelota K06965 PELO; protein pelota
D Py04_1471 putative peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1
D Py04_1376 Translation elongation factor EF1A, eukaryotic/archaeal K03231 EEF1A; elongation factor 1-alpha
D Py04_0118 exosome complex RNA-binding protein Csl4 K07573 CSL4; exosome complex component CSL4
D Py04_1445 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4
D Py04_1444 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41
D Py04_1443 putative exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42
D Py04_0781 putative Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_0119 archaea-specific helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-]
C 03041 Spliceosome [BR:pys03041]
D Py04_1012 hypothetical protein containing zinc finger domain K06874 ZPR1; zinc finger protein ZPR1
C 03011 Ribosome [BR:pys03011]
D Py04_0133 RPS3A, small subunit ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D Py04_1694 RPS4, small subunit ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e
D Py04_0670 RPS6, small subunit ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e
D Py04_1031 RPS8, small subunit ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e
D Py04_1266 RPS17, small subunit ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e
D Py04_1258 RPS19, small subunit ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e
D Py04_0404 RPS24, small subunit ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e
D Py04_0374 RPS27, small subunit ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e
D Py04_0403 RPS27A, small subunit ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Py04_1382 RPS28, small subunit ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e
D Py04_1706 RPL4, large subunit ribosomal protein L4e K02930 RP-L4e; large subunit ribosomal protein L4e
D Py04_1383 RPL7A, large subunit ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Py04_1121 RPL10, large subunit ribosomal protein L10e K02866 RP-L10e; large subunit ribosomal protein L10e
D Py04_1191 RPL14, large subunit ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e
D Py04_0878 RPL15, large subunit ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e
D Py04_1527 RPL18, large subunit ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e
D Py04_1688 RPL19, large subunit ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e
D Py04_0952 RPL21, large subunit ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e
D Py04_1381 RPL24, large subunit ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e
D Py04_1437 RPL30, large subunit ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e
D Py04_0571 RPL31, large subunit ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e
D Py04_1689 RPL32, large subunit ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e
D Py04_1193 RPL34, large subunit ribosomal protein L34e K02915 RP-L34e; large subunit ribosomal protein L34e
D Py04_1760 RPL35A, large subunit ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae
D Py04_1411 RPL37, large subunit ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e
D Py04_0039 RPL37A, large subunit ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D Py04_0572 RPL39, large subunit ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e
D Py04_1278 RPL40, large subunit ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Py04_0373 RPL44, large subunit ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e
D Py04_1521 rpsB, small subunit ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Py04_1701 rpsC, small subunit ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Py04_1530 rpsD, small subunit ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Py04_1686 rpsE, small subunit ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Py04_1434 rpsG, small subunit ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Py04_1691 rpsH, small subunit ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Py04_1525 rpsI, small subunit ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Py04_1375 rpsJ, small subunit ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Py04_1529 rpsK, small subunit ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Py04_1435 rpsL, small subunit ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Py04_1531 rpsM, small subunit ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Py04_1692 rpsN, small subunit ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Py04_0130 rpsO, small subunit ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Py04_1697 rpsQ, small subunit ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Py04_1703 rpsS, small subunit ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Py04_0058 rplA, large subunit ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Py04_1704 rplB, large subunit ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Py04_1707 rplC, large subunit ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Py04_1693 rplE, large subunit ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Py04_1690 rplF, large subunit ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Py04_0057 rplJ, large subunit ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Py04_0059 rplK, large subunit ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Py04_1526 rplM, large subunit ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Py04_1696 rplN, large subunit ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Py04_1684 rplO, large subunit ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Py04_1687 rplR, large subunit ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Py04_1702 rplV, large subunit ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Py04_1705 rplW, large subunit ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Py04_1695 rplX, large subunit ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Py04_1700 rpmC, large subunit ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Py04_1685 rpmD, large subunit ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Py04_0056 rpl12, large subunit ribosomal protein L12 K02869 RP-L12; large subunit ribosomal protein L12
D Py04_0569 rplX, large subunit ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX
D Py04_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Py04_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Py04_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Py04_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:pys03009]
D Py04_0126 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56
D Py04_1536 putative H/ACA RNA-protein complex component Cbf5p K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D Py04_0822 H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Py04_0037 hypothetical protein containing Brix domain K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D Py04_1208 putative ribosome biogenesis protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D Py04_1456 hypothetical protein K06961 KRR1; ribosomal RNA assembly protein
D Py04_1457 putative serine/threonine protein kinase, rio1 family K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D Py04_0558 hypothetical protein containing RIO-like kinase domain K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
D Py04_0813 putative AMP/CMP kinase K18532 AK6; adenylate kinase [EC:2.7.4.3]
D Py04_0761 ATPase RIL K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D Py04_1262 putative gtp1/obg family GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein
D Py04_1373 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Py04_0013 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Py04_0265 putative Polyribonucleotide 5'-hydroxyl-kinase PYRAB01840 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
D Py04_0570 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D Py04_0928 putative nonsense-mediated mRNA decay protein K07562 NMD3; 60S ribosomal export protein NMD3
D Py04_1446 putative RNA-associated protein K14574 SDO1; ribosome maturation protein SDO1
D Py04_1770 cell division protein CDC48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1074 putative cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_0204 hypothetical protein K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D Py04_0655 GTP-binding protein K03595 era; GTPase
D Py04_0125 rRNA 2'-O-methyltransferase fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein
D Py04_1383 RPL7A, large subunit ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D Py04_1673 H/ACA RNA-protein complex component Gar1 K07569 gar1; RNA-binding protein
D Py04_1436 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA
D Py04_1749 putative dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Py04_0900 nol1-nop2-sun family nucleolar protein II K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Py04_0767 nol1-nop2-sun family nucleolar protein IV K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Py04_1532 putative ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Py04_0399 hypothetical protein containing methyltransferase domain K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Py04_0419 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Py04_1138 putative GTP-binding protein, HflX type K03665 hflX; GTPase
D Py04_0625 sua5 superfamily-like protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Py04_1259 putative RNA-binding protein K07574 yhbY; RNA-binding protein
D Py04_0567 translation-associated GTPase K06942 ychF; ribosome-binding ATPase
D Py04_0241 putative Ribonuclease E -like protein K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-]
C 03016 Transfer RNA biogenesis [BR:pys03016]
D Py04_1373 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Py04_0013 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Py04_1490 Ribonuclease P protein component 4 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D Py04_0948 Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Py04_1491 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Py04_1429 hypothetical protein K24956 ZBTB8OS; protein archease
D Py04_1376 Translation elongation factor EF1A, eukaryotic/archaeal K03231 EEF1A; elongation factor 1-alpha
D Py04_1579 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Py04_0905 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Py04_0776 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Py04_0889 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Py04_0988 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Py04_1371 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Py04_0871 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Py04_0421 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0153 putative alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0338 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_1128 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Py04_0307 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_0188 asparagine synthetase A K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Py04_1498 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Py04_1181 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Py04_1186 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Py04_1117 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Py04_0440 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Py04_0415 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Py04_1100 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Py04_1101 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Py04_1051 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Py04_0393 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Py04_0065 putative D-tyrosyl-tRNA(Tyr) deacylase K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Py04_0011 putative methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
D Py04_1759 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D Py04_0320 nol1-nop2-sun family nucleolar protein III K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D Py04_0244 putative met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Py04_1336 putative met-10+ protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Py04_1786 putative l-isoaspartyl protein carboxyl methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Py04_0977 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D Py04_1597 putative tRNA-modifying protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D Py04_0683 met-10+ protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D Py04_0777 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D Py04_0023 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D Py04_0835 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Py04_1432 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Py04_0820 pseudouridylate synthase K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D Py04_0631 o-sialoglycoprotein endopeptidase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D Py04_0323 putative DNA-binding/iron metalloprotein/AP endonuclease K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D Py04_0002 Putative N-acetlyltransferase (GNAT) containing protein K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D Py04_0625 sua5 superfamily-like protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Py04_0183 hypothetical protein containing tRNA acetyltransferase domain K06963 TAN1; tRNA acetyltransferase TAN1
D Py04_0226 putative RNA-binding protein K06963 TAN1; tRNA acetyltransferase TAN1
D Py04_1767 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5]
D Py04_0167 tRNA CCA-pyrophosphorylase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D Py04_0418 putative tRNA-splicing endonuclease subunit alpha K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D Py04_0168 putative 2'5' RNA-ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Py04_0097 RNA 2'-phosphotransferase-like protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D Py04_0288 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D Py04_1143 putative RNA methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D Py04_1348 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D Py04_1213 hypothetical protein K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-]
D Py04_0749 putative tRNA methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221]
D Py04_1110 putative SAM-dependent RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D Py04_0652 tRNA-(G10-N2) methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D Py04_0643 tRNA 2'-O-methylase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D Py04_1430 putative nol1-nop2-sun family nucleolar protein I K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D Py04_0428 putative ATPase of the PP-loop superfamilyl K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Py04_0705 putative KEOPS complex Cgi121-like subunit K09119 cgi121; KEOPS complex subunit Cgi121
D Py04_0036 hypothetical protein similar to KEOPS complex Pcc1-like subunit K09741 pcc1; KEOPS complex subunit Pcc1
D Py04_0177 putative queuosine biosynthesis QueC-like ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Py04_0375 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Py04_1119 putative organic radical activating enzyme, radical SAM superfamily K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Py04_1170 Archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48]
D Py04_1270 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1717 putative thiamin biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Py04_1738 hypothetical protein K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
D Py04_0687 hypothetical protein containing Acyl-CoA N-acyltransferase domain K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
C 03012 Translation factors [BR:pys03012]
D Py04_1458 translation initiation factor IF-1 K03236 EIF1A; translation initiation factor 1A
D Py04_1699 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D Py04_0821 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1
D Py04_0663 translation initiation factor IF-2 K03238 EIF2S2; translation initiation factor 2 subunit 2
D Py04_1598 translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3
D Py04_0628 translation initiation factor IF-2B subunit alpha K03680 EIF2B4; translation initiation factor eIF-2B subunit delta
D Py04_1206 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A
D Py04_0815 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B
D Py04_0570 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6
D Py04_1376 Translation elongation factor EF1A, eukaryotic/archaeal K03231 EEF1A; elongation factor 1-alpha
D Py04_0087 Translation elongation factor EF1B, beta chain, archaeal K03232 EEF1B; elongation factor 1-beta
D Py04_0035 Translation elongation factor EFG/EF2, archaeal K03234 EEF2; elongation factor 2
D Py04_1021 putative diphthine synthase, DPH2 subunit K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D Py04_1196 putative n-type ATP pyrophosphatase superfamily protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D Py04_0449 hypothetical protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D Py04_1471 putative peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1
D Py04_1645 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Py04_1433 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C 03110 Chaperones and folding catalysts [BR:pys03110]
D Py04_0075 putative thermosome, subunit alpha K22447 cct; archaeal chaperonin
D Py04_1771 small heat shock protein HSP20 family K13993 HSP20; HSP20 family protein
D Py04_0568 prefoldin subunit alpha K04797 pfdA; prefoldin alpha subunit
D Py04_0577 prefoldin subunit beta K04798 pfdB; prefoldin beta subunit
D Py04_1468 putative hydrogenase nickel incorporation protein K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Py04_1350 peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Py04_0921 Thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:pys04131]
D Py04_0843 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Py04_1770 cell division protein CDC48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1074 putative cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_0840 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Py04_0061 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D Py04_1184 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D Py04_1124 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Py04_1376 Translation elongation factor EF1A, eukaryotic/archaeal K03231 EEF1A; elongation factor 1-alpha
C 04121 Ubiquitin system [BR:pys04121]
D Py04_1278 RPL40, large subunit ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D Py04_0403 RPS27A, small subunit ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
C 03051 Proteasome [BR:pys03051]
D Py04_1447 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D Py04_1347 putative proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Py04_0312 proteasome, subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D Py04_0269 putative Proteasome regulatory ATPase K03420 psmR; proteasome regulatory subunit
C 03032 DNA replication proteins [BR:pys03032]
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Py04_0115 cytosine-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Py04_0822 H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Py04_1536 putative H/ACA RNA-protein complex component Cbf5p K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D Py04_1590 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Py04_0236 putative cell division control protein 6 K10725 cdc6A; archaeal cell division control protein 6
D Py04_0664 putative MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D Py04_0263 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102]
D Py04_0264 DNA primase large subunit K18882 priL; DNA primase large subunit
D Py04_1093 hypothetical protein K09723 ginS; DNA replication factor GINS
D Py04_0665 hypothetical protein K09723 ginS; DNA replication factor GINS
D Py04_1540 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Py04_0368 DNA-dependent DNA polymerase family B protein K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D Py04_0238 DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D Py04_0237 DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D Py04_0246 replication factor C large subunit K04800 rfcL; replication factor C large subunit
D Py04_0247 replication factor C small subunit K04801 rfcS; replication factor C small subunit
D Py04_1454 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D Py04_1455 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D Py04_0676 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Py04_0678 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-]
C 03036 Chromosome and associated proteins [BR:pys03036]
D Py04_0115 cytosine-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Py04_1708 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-]
D Py04_1713 Archaeal histone A K24450 hmf; DNA-binding protein
D Py04_1593 histone a2 K24450 hmf; DNA-binding protein
D Py04_0120 transcriptional regulator, Lrp-AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Py04_0398 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Py04_1724 putative chromosome segregation protein smc K03529 smc; chromosome segregation protein
D Py04_1723 putative chromosome segregation and condensation protein ScpA-like protein K05896 scpA; segregation and condensation protein A
D Py04_0026 putative ScpB Prokaryotic chromosome segregation and condensation protein-like protein K06024 scpB; segregation and condensation protein B
D Py04_0062 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_0707 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_0667 cell division inhibitor minD - like protein K03609 minD; septum site-determining protein MinD
D Py04_1487 cell division ATPase MinD K03609 minD; septum site-determining protein MinD
D Py04_1730 hypothetical protein K03609 minD; septum site-determining protein MinD
D Py04_0708 hypothetical protein K03496 parA; chromosome partitioning protein
D Py04_1756 putative integrase-recombinase protein K04763 xerD; integrase/recombinase XerD
D Py04_0960 MRP family nucleotide-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Py04_1467 putative ATPase involved in chromosome partitioning, minD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:pys03400]
D Py04_1765 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Py04_1385 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Py04_1094 DNA polymerase sliding clamp K04802 PCNA; proliferating cell nuclear antigen
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Py04_1516 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Py04_0845 DNA repair helicase rad3 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Py04_1466 putative ADP-ribose pyrophosphatase (nudix family) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Py04_1366 hypothetical protein containing Uracil-DNA glycosylase like domain K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Py04_0693 3-methyladenine DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Py04_0409 endonuclease IV like protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Py04_1098 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Py04_0131 Phosphoesterase, RecJ-like protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Py04_0629 DNA mismatch recognition protein K07456 mutS2; DNA mismatch repair protein MutS2
D Py04_1145 putative chromosome segregation protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Py04_1146 putative DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D Py04_0112 putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Py04_0225 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA
D Py04_0240 putative DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB
D Py04_1254 Holliday junction resolvase K03552 hjr; holliday junction resolvase [EC:3.1.21.10]
D Py04_1147 putative bipolar DNA helicase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D Py04_1144 hypothetical protein K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
D Py04_0750 putative DNA/RNA helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D Py04_0676 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Py04_1253 putative ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Py04_1175 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D Py04_0515 Ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Py04_1782 hypothetical protein K22585 nreA; DNA repair protein NreA
C 03029 Mitochondrial biogenesis [BR:pys03029]
D Py04_1373 Ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D Py04_0013 Ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D Py04_0655 GTP-binding protein K03595 era; GTPase
D Py04_1051 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Py04_0889 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Py04_1498 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Py04_1371 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Py04_0960 MRP family nucleotide-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Py04_1467 putative ATPase involved in chromosome partitioning, minD/MRP superfamily K03593 mrp; ATP-binding protein involved in chromosome partitioning
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:pys02000]
D Py04_1662 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Py04_1661 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Py04_0157 molybdate/tungstate transport system substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein
D Py04_0156 molybdate/tungstate transport system permease protein K15496 wtpB; molybdate/tungstate transport system permease protein
D Py04_0155 molybdate/tungstate transport system ATP-binding protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6]
D Py04_1237 putative thiamin-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D Py04_1235 iron(III) ABC transporter permease K02063 thiP; thiamine transport system permease protein
D Py04_1236 putative sugar-binding transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D Py04_1332 maltose ABC transporter ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_0082 maltose/maltodextrin transport ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_1508 sugar ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Py04_0206 putative malE-like sugar binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Py04_0207 maltodextrin transport system permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Py04_0208 malg-like sugar transport inner membrane protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Py04_0273 perplasmic sugar binding protein K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Py04_0272 putative ABC transporter permease K17238 inoF; inositol-phosphate transport system permease protein
D Py04_0271 maltose transport system permease K17239 inoG; inositol-phosphate transport system permease protein
D Py04_0270 maltose/maltodextrin transport ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Py04_1623 putative membrane lipoprotein (tmpc) K07335 bmpA; basic membrane protein A and related proteins
D Py04_1621 putative ribose/galactose ABC transporter K23535 nupB; general nucleoside transport system permease protein
D Py04_1620 ribose ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Py04_1622 ABC sugar transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D Py04_1328 maltose ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Py04_1505 MalE-like maltose/maltodextrin ABC transporter K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Py04_0085 multiple sugar transport system substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Py04_0084 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D Py04_1329 maltose ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D Py04_1506 MalF-like maltose/maltodextrin ABC transporter K02025 ABC.MS.P; multiple sugar transport system permease protein
D Py04_0083 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Py04_1330 maltose transport inner membrane protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Py04_1507 MalG-like maltose/maltodextrin ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Py04_0551 putative dipeptide transport protein precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_1343 dipeptide ABC transporter dipeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_0344 putative peptide ABC transporter periplasmic protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_1018 dipeptide ABC transporter dipeptide binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Py04_0552 putative dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_1342 dipeptide transport system permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_0345 oligopeptide transport system permease appB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_1017 dipeptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Py04_0553 putative oligopeptide transport system permease AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_1341 dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_0346 oligopeptide transport system permease appC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_1016 dipeptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Py04_0554 putative peptide ABC uptake protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_0347 ABC transport ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1015 dipeptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1340 peptide ABC transporter atp-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Py04_1339 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Py04_0348 dipeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Py04_0830 iron (III) ABC transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Py04_0829 iron(III) ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D Py04_0828 putative iron (III) ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Py04_1548 putative iron ABC transporter ATP-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Py04_0686 iron (III) dicitrate transport system permease K25027 btuC; cobalamin transport system permease protein
D Py04_0685 iron (III) dicitrate transport ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Py04_0096 putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D Py04_0230 ABC-type cobalt transport system, permease K16785 ecfT; energy-coupling factor transport system permease protein
D Py04_1743 putative cobalt transport ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Py04_0229 cobalt ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Py04_0566 ABC transporter periplasmic binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D Py04_1541 putative ABC-type manganese/zinc transport system, permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D Py04_1542 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D Py04_0914 permease K16905 K16905; fluoroquinolone transport system permease protein
D Py04_0915 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein
D Py04_0916 multidrug ABC transporter ATPase K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-]
D Py04_0649 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1422 putative Na+ efflux ABC transporter membrane protein NatB K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_0048 ABC transporter ATP-binding protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_0926 ABC transporter ATP-binding protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_0927 ABC-type multidrug transport system permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_0755 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1217 ABC type transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1220 putative ABC-2 type transport system permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1392 ABC type transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1774 ABC-type multidrug transport system permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1775 ABC transporter ATP-binding protein permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D Py04_1423 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_0925 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_0753 putative multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_0967 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_1219 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_0049 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_1391 ABC-type multidrug transporter, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_1776 putative multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Py04_1203 putative Fe-S cluster assembly ABC transporter ATPase, sufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Py04_1732 putative DNA damage-inducible protein K26939 norM; MATE family, multidrug efflux pump
D Py04_1127 DNA damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D Py04_0224 calcium-gated potassium channel protein K10716 kch; voltage-gated potassium channel
D Py04_1154 putative magnesium transporter K07244 K07244; mgtE-like transporter
D Py04_1123 hypothetical protein K07244 K07244; mgtE-like transporter
D Py04_1393 putative camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Py04_1725 putative Murein hydrolase exporter lrgA-like protein (lrgA) K06518 cidA; holin-like protein
D Py04_0045 major facilitator superfamily permease K16211 malY; maltose/moltooligosaccharide transporter
D Py04_0046 major facilitator superfamily permease K16211 malY; maltose/moltooligosaccharide transporter
D Py04_0780 putative cobalt/zinc/cadmium cation efflux pump protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Py04_0778 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D Py04_1052 putative permease K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Py04_0668 hypothetical protein containing drug/metabolite transporter (DMT) domain K03298 TC.DME; drug/metabolite transporter, DME family
D Py04_1647 putative DMT family permease K03298 TC.DME; drug/metabolite transporter, DME family
D Py04_0530 putative Na(+)/Ca(2+)-exchanging protein K07301 yrbG; cation:H+ antiporter
D Py04_0713 Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter
D Py04_0429 Na+/H+ antiporter, napA type (napA) K26730 napA; Na+:H+ antiporter
D Py04_1481 putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D Py04_1148 putative Na+/H+ antiporter K26730 napA; Na+:H+ antiporter
D Py04_1742 putative TRK system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D Py04_0326 TRK potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D Py04_1065 xanthine/uracilpermease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Py04_0840 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Py04_1159 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Py04_1160 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Py04_1299 putative monovalent cation/H+ antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Py04_1158 putative monovalent cation/H+ antiporter subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Py04_1300 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Py04_1319 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Py04_1157 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Py04_1318 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Py04_1295 monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Py04_1163 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Py04_1325 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Py04_1296 monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Py04_1162 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Py04_1324 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Py04_1297 monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Py04_1161 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Py04_1323 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Py04_0452 putative permease auxin efflux carrier family protein K24180 mleP; malate permease and related proteins
D Py04_0314 hypothetical protein K23675 fmnP; riboflavin transporter
D Py04_0505 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D Py04_0283 putative Multiple antibiotic resistance (Mar)-related protein K05595 marC; multiple antibiotic resistance protein
D Py04_0718 multiple antibiotic resistance protein related protein K05595 marC; multiple antibiotic resistance protein
D Py04_0757 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Py04_0760 methylmalonyl-coadecarboxylase subunit alpha K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Py04_0758 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Py04_0759 putative Methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Py04_1056 putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D Py04_1057 putative ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:pys02044]
D Py04_0591 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0592 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0593 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0594 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0595 archaeal flagellar protein FlaC K07822 flaC; archaeal flagellar protein FlaC
D Py04_0596 archaeal flagellar protein FlaD or FlaE K07327 flaD; archaeal flagellar protein FlaD
D Py04_0598 archaeal flagellar protein FlaG K07330 flaG; archaeal flagellar protein FlaG
D Py04_0599 archaeal flagellar protein FlaH K07331 flaH; archaeal flagellar protein FlaH
D Py04_0600 archaeal flagellar protein FlaI K07332 flaI; archaeal flagellar protein FlaI
D Py04_1105 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D Py04_0601 archaeal flagellar protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ
D Py04_1104 hypothetical protein containing type II secretion system protein F domain K07333 flaJ; archaeal flagellar protein FlaJ
D Py04_0633 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D Py04_1476 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Py04_0325 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Py04_0324 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Py04_0030 hypothetical protein K22228 secG; preprotein translocase subunit SecG
D Py04_1683 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Py04_1586 signal recognition particle protein Srp54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Py04_1556 signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor
D Py04_0061 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D Py04_1784 signal recognition particle protein Srp19 K03105 SRP19; signal recognition particle subunit SRP19
C 02042 Bacterial toxins
C 02022 Two-component system [BR:pys02022]
D Py04_0537 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Py04_0535 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Py04_0536 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02035 Bacterial motility proteins [BR:pys02035]
D Py04_0537 chemotaxis histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Py04_0532 purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D Py04_0538 Chemotaxis protein CheC 1 K03410 cheC; chemotaxis protein CheC
D Py04_0539 Chemotaxis protein CheC 2 K03410 cheC; chemotaxis protein CheC
D Py04_0540 chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Py04_0534 chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Py04_0536 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Py04_0535 chemotaxis response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Py04_0533 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0541 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0630 methyl-accepting chemotaxis-like protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_1778 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Py04_0591 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0592 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0593 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0594 Archaeal flagellin, N-terminal domain protein K07325 flaB; archaeal flagellin FlaB
D Py04_0595 archaeal flagellar protein FlaC K07822 flaC; archaeal flagellar protein FlaC
D Py04_0596 archaeal flagellar protein FlaD or FlaE K07327 flaD; archaeal flagellar protein FlaD
D Py04_0598 archaeal flagellar protein FlaG K07330 flaG; archaeal flagellar protein FlaG
D Py04_0599 archaeal flagellar protein FlaH K07331 flaH; archaeal flagellar protein FlaH
D Py04_0600 archaeal flagellar protein FlaI K07332 flaI; archaeal flagellar protein FlaI
D Py04_1105 putative type II secretion system protein K07332 flaI; archaeal flagellar protein FlaI
D Py04_0601 archaeal flagellar protein FlaJ K07333 flaJ; archaeal flagellar protein FlaJ
D Py04_1104 hypothetical protein containing type II secretion system protein F domain K07333 flaJ; archaeal flagellar protein FlaJ
D Py04_0633 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:pys04812]
D Py04_1187 putative ATPase of the AAA+ family K07767 KATNA1; katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
D Py04_1519 hypothetical protein K06990 MEMO1; MEMO1 family protein
D Py04_0062 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_0707 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_1250 cell division protein FtsZ K22222 cetZ; tubulin-like protein CetZ
D Py04_0667 cell division inhibitor minD - like protein K03609 minD; septum site-determining protein MinD
D Py04_1487 cell division ATPase MinD K03609 minD; septum site-determining protein MinD
D Py04_1730 hypothetical protein K03609 minD; septum site-determining protein MinD
D Py04_0708 hypothetical protein K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:pys04147]
D Py04_0371 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1522 putative eno-like enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Py04_1009 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Py04_1124 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Py04_0875 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Py04_0913 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Py04_1376 Translation elongation factor EF1A, eukaryotic/archaeal K03231 EEF1A; elongation factor 1-alpha
D Py04_0035 Translation elongation factor EFG/EF2, archaeal K03234 EEF2; elongation factor 2
D Py04_1337 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D Py04_0435 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Py04_0403 RPS27A, small subunit ribosomal protein S27Ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D Py04_1770 cell division protein CDC48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1074 putative cell division control protein 48, aaa family K13525 VCP; transitional endoplasmic reticulum ATPase
D Py04_1084 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Py04_0585 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Py04_1169 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_1682 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Py04_0363 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Py04_0362 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Py04_0043 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Py04_0623 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Py04_1357 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Py04_1480 glutamate dehydrogenase (NAD(P)+) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Py04_0018 putative triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:pys02048]
D Py04_0112 putative CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Py04_0111 putative CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Py04_0790 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Py04_0109 putative CRISPR-associated helicase Cas3 domain-containing protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Py04_0802 putative DEAD-box/DEAH box helicase superfamily protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Py04_0801 CRISPR-associated HD domain-containing protein K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-]
D Py04_0805 putative CRISPR-associated autoregulator, DevR family K19074 csa2; CRISPR-associated protein Csa2
D Py04_0800 CRISPR locus-related DNA-binding protein K07725 csa3; CRISPR-associated protein Csa3
D Py04_0099 DevR family CRISPR-associated autoregulator K19075 cst2; CRISPR-associated protein Cst2
D Py04_0110 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Py04_0793 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Py04_1675 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Py04_0804 CRISPR-associated protein Cas5 family K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c
D Py04_0107 putative crispr-associated protein cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Py04_0659 CRISPR repeat Cas6-like protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Py04_0795 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Py04_0098 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D Py04_0106 putative CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Py04_0105 putative CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Py04_0104 putative CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Py04_0103 putative CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Py04_0102 putative CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Py04_0101 putative CRISPR-associated protein, MJ1666 family K19143 csx1; CRISPR-associated protein Csx1
D Py04_0115 cytosine-specific DNA-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Py04_1072 putative GTPase subunit of restriction endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Py04_1073 putative McrBC 5-methylcytosine restriction system component K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D Py04_0062 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_0707 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Py04_1579 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Py04_1185 hypothetical protein K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:pys00537]
D Py04_0875 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:pys03100]
D Py04_t0006 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Py04_t0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0022 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Py04_t0035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Py04_t0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Py04_t0031 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Py04_t0012 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Py04_t0009 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Py04_t0014 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Py04_t0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Py04_t0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0010 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Py04_t0001 tRNA-His K14226 tRNA-His; tRNA His
D Py04_t0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Py04_t0013 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0042 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Py04_t0015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Py04_t0032 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Py04_t0008 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0033 tRNA-Met K14230 tRNA-Met; tRNA Met
D Py04_t0004 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Py04_t0003 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0039 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0041 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Py04_t0020 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Py04_t0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Py04_t0025 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Py04_t0017 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Py04_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_t0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_t0046 tRNA-Val K14237 tRNA-Val; tRNA Val
D Py04_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Py04_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Py04_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Py04_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Py04_1069 indolepyruvate ferredoxin oxidoreductase subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Py04_0711 indolepyruvate ferredoxin oxidoreductase, subunit alpha K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Py04_0293 indolepyruvate oxidoreductase subunit B K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Py04_0712 indolepyruvate ferredoxin oxidoreductase subunit beta K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Py04_1402 NADH oxidase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3]
D Py04_1126 putative Coenzyme A disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D Py04_1134 putative gltB-1 glutamate synthase small chain K20202 sudA; sulfide dehydrogenase subunit alpha [EC:1.8.1.19]
D Py04_1133 ferredoxin-NADP(+) reductase subunit alpha K20203 sudB; sulfide dehydrogenase subunit beta [EC:1.8.1.19]
D Py04_1314 putative NADH-ubiquinone oxidoreductase subunit 49 kDa K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2]
D Py04_1315 putative NADH-ubiquinone oxidoreductase subunit 30 kDa K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2]
D Py04_1316 putative NADH-ubiquinone oxidoreductase subunit NuoB K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2]
D Py04_1401 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Py04_0989 ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Py04_0010 ferredoxin-NADP(+) reductase subunit alpha K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Py04_1294 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5]
D Py04_0080 anaerobic ribonucleoside-triphosphate reductase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Py04_1354 putative pyruvate formate-lyase activating enzyme-like protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Py04_1173 putative pyruvate formate-lyase activating enzyme K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Py04_0020 putative protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Py04_0739 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98]
D Py04_0811 carbamoyl transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D Py04_1502 Kojibiose phosphorylase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230]
D Py04_0015 putative dolichyl-phosphate mannoosyltransferase-like protein K21349 ggs; glucosylglycerate synthase [EC:2.4.1.268]
D Py04_1013 putative Glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Py04_0624 Glycosyltransferase family 1 protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Py04_0650 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D Py04_0736 putative methyltransferase K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128]
D Py04_0227 putative Queuine tRNA-ribosyltransferase K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-]
D Py04_0024 putative Fe-S oxidoreductase K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-]
D Py04_0159 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D Py04_1047 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Py04_0642 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39]
D Py04_1406 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Py04_1463 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Py04_1055 putative TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Py04_0910 putative endonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D Py04_0232 Repair Endonuclease K07503 nucS; endonuclease [EC:3.1.-.-]
D Py04_0765 putative Polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Py04_0547 putative N-acetylglucosaminylphosphatidylinositol deacetylase K22408 dac; N,N'-diacetylchitobiose non-reducing end deacetylase [EC:3.5.1.136]
D Py04_0762 putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Py04_0521 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Py04_0699 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Py04_0502 methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Py04_0645 Sam Hydroxide Adenosyltransferase K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Py04_0355 putative YjeF-like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Py04_0968 N-glycosylase/DNA lyase K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18]
D Py04_1420 RNA 3'-terminal-phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5]
D Py04_0158 cyclic 2,3-diphospoglycerate-synthetase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9]
D Py04_0546 putative ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Py04_0008 ferredoxin K05337 fer; ferredoxin
D Py04_1313 putative mbh13 NADH dehydrogenase subunit (like HycD, CooK, echB) K15829 hycD; formate hydrogenlyase subunit 4
D Py04_1298 membrane bound hydrogenase subunit MbxD K14113 ehbD; energy-converting hydrogenase B subunit D
D Py04_1322 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D
D Py04_1320 putative monovalent cation/H+ antiporter subunit B K14118 ehbI; energy-converting hydrogenase B subunit I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D Py04_0763 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Py04_0321 putative Integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Py04_0179 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Py04_0694 transcription factor K03627 MBF1; putative transcription factor
D Py04_1768 DNA/RNA-binding protein albA K03622 ssh10b; archaea-specific DNA-binding protein
D Py04_1412 nuclear ribonucleoprotein K04796 RUXX; small nuclear ribonucleoprotein
D Py04_0722 hypothetical protein K07743 K07743; transcriptional regulator
D Py04_0213 hypothetical protein K07745 K07745; transcriptional regulator
C 99974 Translation
D Py04_1748 hypothetical protein K07572 K07572; putative nucleotide binding protein
D Py04_0740 putative mRNA 3'-end processing factor K07577 K07577; putative mRNA 3-end processing factor
D Py04_0367 putative methyltransferase like protein K07579 K07579; putative methylase
D Py04_0088 putative Zn-ribbon RNA-binding protein K07580 K07580; Zn-ribbon RNA-binding protein
D Py04_0012 putative exosome subunit, DUF54 family K07581 K07581; RNA-binding protein
D Py04_0200 hypothetical protein containing adenine nucleotide alpha hydrolases domain K07585 K07585; tRNA methyltransferase
C 99975 Protein processing
D Py04_0862 hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D Py04_0861 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Py04_0728 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Py04_1462 putative Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Py04_0860 hydrogenase expression/formation regulatory protein K04656 hypF; hydrogenase maturation protein HypF
D Py04_1363 hypothetical protein containing OsmC like domain K07397 yhfA; putative redox protein
D Py04_1403 putative protease ClpP K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Py04_1000 putative IS element ISTsi1 orfA, resolvase K07450 K07450; putative resolvase
D Py04_0220 excisionase K07450 K07450; putative resolvase
D Py04_0653 Phosphoesterase, RecJ-like protein K07463 K07463; archaea-specific RecJ-like exonuclease
D Py04_1728 putative TBP-interacting protein TIP49 K07472 TIP49; TBP-interacting protein
D Py04_1097 hypothetical protein K07477 K07477; translin
D Py04_0436 hypothetical protein containing homoing endonucleases domain K07500 K07500; DNA endonuclease
D Py04_1578 transposase ISTsi3 K07496 K07496; putative transposase
D Py04_0221 putative transposase, IS605 OrfB family K07496 K07496; putative transposase
D Py04_1001 putative IS element ISTsi1 orfB trasposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D Py04_0527 putative restriction endonuclease, HsdR, Type I R-M system K07504 K07504; predicted type IV restriction endonuclease
D Py04_0164 putative restriction endonuclease, Type I R-M system K07504 K07504; predicted type IV restriction endonuclease
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Py04_1114 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Py04_1137 Sodium/phosphate symporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Py04_0983 proline permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D Py04_1223 proline permease (putP-2) K03307 TC.SSS; solute:Na+ symporter, SSS family
D Py04_0696 hypothetical protein containing Sodium:alanine symporter domain K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Py04_0971 Allophanate hydrolase, subunit 1 K06351 kipI; inhibitor of KinA
D Py04_1513 putative SpoIIM-like stage II sporulation protein M related protein K06384 spoIIM; stage II sporulation protein M
D Py04_0194 hypothetical protein K06384 spoIIM; stage II sporulation protein M
C 99993 Cell motility
D Py04_0543 hypothetical protein K09156 cheF; taxis protein CheF
C 99995 Signaling proteins
D Py04_0838 carbon starvation protein A K06200 cstA; carbon starvation protein
D Py04_1280 putative serine/threonine protein kinase K07176 K07176; putative serine/threonine protein kinase
D Py04_1400 hypothetical protein K08482 kaiC; circadian clock protein KaiC
D Py04_0816 hypothetical protein K06875 PDCD5; programmed cell death protein 5
C 99992 Structural proteins
C 99994 Others
D Py04_0929 periplasmic divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Py04_1267 hypothetical protein K04477 ycdX; putative hydrolase
D Py04_0958 ATPase K06865 K06865; ATPase
D Py04_0902 ATP-dependent RNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Py04_1150 hypothetical protein containing HAD-like domain K07025 K07025; putative hydrolase of the HAD superfamily
D Py04_0316 putative Hydrolase, HAD superfamily K07025 K07025; putative hydrolase of the HAD superfamily
D Py04_0378 hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D Py04_1544 putative hydrolase related to 2-haloalkanoic acid dehalogenase K07025 K07025; putative hydrolase of the HAD superfamily
D Py04_0248 hypothetical protein K07038 K07038; inner membrane protein
D Py04_0282 hypothetical protein containing DUF457 domain K07038 K07038; inner membrane protein
D Py04_0826 putative metal-dependent hydrolase K07049 K07049; TatD-related deoxyribonuclease
D Py04_0681 hypothetical protein K07143 K07143; UPF0148 protein
D Py04_0260 putative Integral membrane protein unknown function K08971 K08971; putative membrane protein
D Py04_0411 hypothetical protein K08975 K08975; putative membrane protein
C 99997 Function unknown
D Py04_0234 putative 3-isopropylmalate dehydratase K06869 K06869; uncharacterized protein
D Py04_1310 putative archaeal protease K06870 K06870; uncharacterized protein
D Py04_1711 hypothetical protein K06885 K06885; uncharacterized protein
D Py04_0047 2-acetyl-1-alkylglycerophosph ocholine esterase K06889 K06889; uncharacterized protein
D Py04_0474 hypothetical protein K06921 K06921; uncharacterized protein
D Py04_0477 putative archaeal ATPase 1 K06921 K06921; uncharacterized protein
D Py04_0478 putative archaeal ATPase 2 K06921 K06921; uncharacterized protein
D Py04_0525 putative ATPase family protein K06921 K06921; uncharacterized protein
D Py04_1752 putative DEXX-box ATPase K06921 K06921; uncharacterized protein
D Py04_1176 putative CoA-binding protein K06929 K06929; uncharacterized protein
D Py04_0770 hypothetical protein K06933 K06933; uncharacterized protein
D Py04_0771 hypothetical protein K06934 K06934; uncharacterized protein
D Py04_1499 molybdenum cofactor biosynthesis protein A K06935 K06935; uncharacterized protein
D Py04_0001 hypothetical protein K06940 K06940; uncharacterized protein
D Py04_1584 hypothetical protein K06940 K06940; uncharacterized protein
D Py04_0381 putative metal-dependent phosphohydrolase, HD superfamily K06950 K06950; uncharacterized protein
D Py04_1274 putative Metallophosphoesterase, calcineurin superfamily K06953 K06953; uncharacterized protein
D Py04_1113 putative Exonuclease SbcD like protein K06953 K06953; uncharacterized protein
D Py04_1054 hypothetical protein K06971 K06971; uncharacterized protein
D Py04_0876 putative SAM-dependent methyltransferase K06983 K06983; uncharacterized protein
D Py04_0050 putative polysaccharide deacetylase K06986 K06986; uncharacterized protein
D Py04_0413 putativeMembrane transport protein, MMPL type K07003 K07003; uncharacterized protein
D Py04_1166 hypothetical protein K07013 K07013; uncharacterized protein
D Py04_0901 hypothetical protein K07022 K07022; uncharacterized protein
D Py04_1346 putative mRNA 3'-end processing factor K07041 K07041; uncharacterized protein
D Py04_0172 putative metal-dependent hydrolase K07045 K07045; uncharacterized protein
D Py04_1085 hypothetical protein K07068 K07068; uncharacterized protein
D Py04_0069 putative Nucleotidyltransferase domain-containing protein K07073 K07073; uncharacterized protein
D Py04_0066 TRAP-type transporter K07080 K07080; uncharacterized protein
D Py04_0562 putative permease K07090 K07090; uncharacterized protein
D Py04_0493 putative permease K07090 K07090; uncharacterized protein
D Py04_0469 putative permease K07090 K07090; uncharacterized protein
D Py04_1421 hypothetical protein K07095 K07095; uncharacterized protein
D Py04_1674 hypothetical protein K07095 K07095; uncharacterized protein
D Py04_0432 hypothetical protein K07096 K07096; uncharacterized protein
D Py04_0170 purine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D Py04_0189 xanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein
D Py04_1448 putative Regulator of amino acid metabolism containing ACT domain K07103 K07103; uncharacterized protein
D Py04_0434 hypothetical protein K07103 K07103; uncharacterized protein
D Py04_1396 putative transcriptional regulator K07108 K07108; uncharacterized protein
D Py04_1573 putative short-chain alcohol dehydrogenase K07124 K07124; uncharacterized protein
D Py04_1395 ABC transporter ATP-binding protein K07128 K07128; uncharacterized protein
D Py04_1063 hypothetical protein K07129 K07129; uncharacterized protein
D Py04_0113 hypothetical protein K07133 K07133; uncharacterized protein
D Py04_0370 putative ATPase K07134 K07134; uncharacterized protein
D Py04_0581 putative tRNA-binding protein K07135 K07135; uncharacterized protein
D Py04_0430 hypothetical protein K07137 K07137; uncharacterized protein
D Py04_1599 hypothetical protein containing PIN domain K07158 K07158; uncharacterized protein
D Py04_0823 hypothetical protein K07159 K07159; uncharacterized protein
D Py04_0721 hypothetical protein K09003 K09003; uncharacterized protein
D Py04_1174 hypothetical protein K09005 K09005; uncharacterized protein
D Py04_0146 hypothetical protein K09120 K09120; uncharacterized protein
D Py04_0729 hypothetical protein K09122 K09122; uncharacterized protein
D Py04_0396 hypothetical protein containing Adenosine specific kinase domain K09129 K09129; uncharacterized protein
D Py04_1557 hypothetical protein K09131 K09131; uncharacterized protein
D Py04_0233 hypothetical protein containing DUF473 domain K09135 K09135; uncharacterized protein
D Py04_1394 hypothetical protein K09137 K09137; uncharacterized protein
D Py04_1275 hypothetical protein K09138 K09138; uncharacterized protein
D Py04_0286 hypothetical protein K09139 K09139; uncharacterized protein
D Py04_0070 hypothetical protein K09141 K09141; uncharacterized protein
D Py04_0472 hypothetical protein K09144 K09144; uncharacterized protein
D Py04_0973 hypothetical protein K09148 K09148; uncharacterized protein
D Py04_0497 hypothetical protein K09149 K09149; uncharacterized protein
D Py04_0675 hypothetical protein K09150 K09150; uncharacterized protein
D Py04_1256 hypothetical protein K09154 K09154; uncharacterized protein
D Py04_1002 putative PAS/PAC sensor protein K09155 K09155; uncharacterized protein
D Py04_0276 hypothetical protein K09713 K09713; uncharacterized protein
D Py04_0911 hypothetical protein K09715 K09715; uncharacterized protein
D Py04_0392 hypothetical protein K09721 K09721; uncharacterized protein
D Py04_1453 hypothetical protein K09724 K09724; uncharacterized protein
D Py04_0616 hypothetical protein K09725 K09725; uncharacterized protein
D Py04_1512 hypothetical protein K09726 K09726; uncharacterized protein
D Py04_1497 hypothetical protein K09727 K09727; uncharacterized protein
D Py04_1272 hypothetical protein K09728 K09728; uncharacterized protein
D Py04_0340 hypothetical protein K09729 K09729; uncharacterized protein
D Py04_1370 hypothetical protein K09730 K09730; uncharacterized protein
D Py04_1271 hypothetical protein K09731 K09731; uncharacterized protein
D Py04_0385 hypothetical protein K09732 K09732; uncharacterized protein
D Py04_0909 hypothetical protein K09736 K09736; uncharacterized protein
D Py04_0621 hypothetical protein K09737 K09737; uncharacterized protein
D Py04_0818 hypothetical protein K09738 K09738; uncharacterized protein
D Py04_0117 hypothetical protein K09742 K09742; uncharacterized protein
D Py04_0029 hypothetical protein K09746 K09746; uncharacterized protein
D Py04_1115 putative phosphate transport regulator K07220 K07220; uncharacterized protein
D Py04_1356 putative phosphate transport regulator K07220 K07220; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 20, 2024