+D GENES KO
#
KEGG Orthology (KO) - Riemerella anatipestifer ATCC 11845 = DSM 15868
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rai00010]
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RA0C_1001 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RA0C_0852 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RA0C_1177 fructose-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA0C_0474 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA0C_0827 glyceraldehydegene-phosphate dehydrogenase, type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA0C_1356 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RA0C_0370 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA0C_1240 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA0C_2037 pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RA0C_0822 pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RA0C_2036 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1374 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rai00020]
D RA0C_1125 citrate synthase i K01647 CS; citrate synthase [EC:2.3.3.1]
D RA0C_2093 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RA0C_0407 isocitrate dehydrogenase, nADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RA0C_0630 2-oxoglutarate dehydrogenase, e1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RA0C_0629 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0844 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA0C_1863 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA0C_1022 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA0C_1021 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA0C_1023 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA0C_1651 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RA0C_0863 malate dehydrogenase (nad) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RA0C_1374 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RA0C_2037 pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RA0C_0822 pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RA0C_2036 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rai00030]
D RA0C_1001 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA0C_0912 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RA0C_0574 transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RA0C_0584 transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RA0C_1439 sugar-phosphate isomerase, rpib/laca/lacb family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D RA0C_2035 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RA0C_0926 pfkb domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1528 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RA0C_1177 fructose-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA0C_0852 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rai00040]
D RA0C_1769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RA0C_0912 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rai00051]
D RA0C_1253 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA0C_1379 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domaini K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RA0C_1531 mannosegene-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RA0C_1703 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RA0C_0852 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RA0C_1177 fructose-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA0C_0474 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA0C_1439 sugar-phosphate isomerase, rpib/laca/lacb family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:rai00052]
D RA0C_0599 udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RA0C_1716 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:rai00053]
D RA0C_1769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RA0C_1703 pyridoxal 4-dehydrogenase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D RA0C_1617 naD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rai00500]
D RA0C_1936 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RA0C_0229 glycoside hydrolase 97 K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RA0C_1001 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rai00520]
D RA0C_1736 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RA0C_1938 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA0C_0472 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RA0C_1690 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RA0C_1613 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RA0C_1416 udp-n-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA0C_1423 udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA0C_1443 putative dehydrogenases-related protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RA0C_0600 degt/dnrj/eryc1/strs aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RA0C_0995 naD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D RA0C_0994 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RA0C_0599 udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA0C_1716 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA0C_1617 naD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RA0C_1001 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA0C_1253 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA0C_1379 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domaini K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RA0C_1531 mannosegene-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:rai00620]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_2037 pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RA0C_0822 pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RA0C_2036 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_1240 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA0C_1090 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RA0C_1261 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RA0C_1260 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RA0C_1176 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1424 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RA0C_1589 rhodanese domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RA0C_1004 thij/pfpi domain-containing protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D RA0C_1750 Malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RA0C_0863 malate dehydrogenase (nad) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RA0C_1651 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RA0C_0541 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RA0C_1374 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rai00630]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_0863 malate dehydrogenase (nad) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RA0C_1125 citrate synthase i K01647 CS; citrate synthase [EC:2.3.3.1]
D RA0C_2093 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_1704 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RA0C_0243 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_1000 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA0C_0942 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA0C_0369 glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_1816 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:rai00640]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_0601 transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_1090 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RA0C_1261 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RA0C_1260 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RA0C_1176 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RA0C_1863 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA0C_0844 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RA0C_0613 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:rai00650]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_0454 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RA0C_0266 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RA0C_1702 enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RA0C_1022 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA0C_1021 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA0C_1023 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA0C_1239 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA0C_1654 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RA0C_0539 3-oxoacid CoA-transferase, a subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RA0C_0540 3-oxoacid CoA-transferase, b subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D RA0C_1863 succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RA0C_0844 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:rai00562]
D RA0C_1761 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D RA0C_0474 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rai00190]
D RA0C_0960 NADH dehydrogenase subunit a K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RA0C_0959 NADH dehydrogenase subunit b K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RA0C_0958 NADH dehydrogenase subunit c K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RA0C_0957 NADH dehydrogenase subunit d K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RA0C_0956 NADH dehydrogenase subunit e K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RA0C_0955 NADH dehydrogenase subunit f K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RA0C_0953 NADH dehydrogenase subunit g K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RA0C_0952 NADH dehydrogenase subunit h K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RA0C_0951 NADH dehydrogenase subunit i K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RA0C_0950 NADH dehydrogenase subunit j K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RA0C_0949 NADH dehydrogenase subunit k K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RA0C_0948 NADH dehydrogenase subunit l K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RA0C_0947 NADH dehydrogenase subunit m K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RA0C_0628 faD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RA0C_1022 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RA0C_1021 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RA0C_1023 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RA0C_1775 cytochrome c oxidase, cbb3-type, subunit i K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D RA0C_1774 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RA0C_1773 cytochrome c class i K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RA0C_1971 cytochrome c class i K08738 CYC; cytochrome c
D RA0C_0498 hypothetical protein K08738 CYC; cytochrome c
D RA0C_0635 ATP synthase f1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RA0C_2001 ATP synthase f1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RA0C_0634 ATP synthase f1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RA0C_0636 ATP synthase f1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RA0C_2002 ATPase, f1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RA0C_0639 ATP synthase f0 subcomplex a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RA0C_0637 ATP synthase f0 subcomplex b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RA0C_0638 ATP synthase f0 subcomplex c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RA0C_0741 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RA0C_0787 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA0C_0699 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA0C_0701 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rai00680]
D RA0C_1000 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA0C_0541 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RA0C_0863 malate dehydrogenase (nad) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RA0C_1177 fructose-bisphosphate aldolase, class ii K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RA0C_0852 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RA0C_1249 hypothetical protein K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_0370 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RA0C_0356 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_1865 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_0357 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:rai00910]
D RA0C_1197 respiratory nitrite reductase (cytochrome, ammonia-forming) precursor K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D RA0C_1198 respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (nrfh) precursor K15876 nrfH; cytochrome c nitrite reductase small subunit
D RA0C_1969 nitrous oxide reductase apoprotein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D RA0C_1072 glutamate dehydrogenase (nad) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_1102 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rai00920]
D RA0C_1270 Exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D RA0C_1980 flavodoxin/nitric oxide synthase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RA0C_1923 serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA0C_1103 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA0C_1924 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RA0C_1870 homoserine o-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RA0C_1868 cys/met metabolism pyridoxal-phosphate-dependent protein K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rai00061]
D RA0C_1090 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RA0C_1261 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RA0C_1260 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RA0C_1176 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RA0C_0978 acyl carrier protein K02078 acpP; acyl carrier protein
D RA0C_1243 acyl carrier protein K02078 acpP; acyl carrier protein
D RA0C_1584 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA0C_0981 beta-ketoacyl-acyl-carrier-protein synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_0257 beta-ketoacyl-acyl-carrier-protein synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_0397 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_1242 3-oxoacyl-(acyl-carrier-protein) synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_2081 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_1432 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA0C_0848 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D RA0C_0263 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RA0C_1035 2-nitropropane dioxygenase npd K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RA0C_0879 amp-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0615 polyprenyl synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rai00071]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RA0C_0266 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RA0C_0537 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RA0C_0879 amp-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0615 polyprenyl synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rai00561]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1743 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rai00564]
D RA0C_1878 naD-dependent glycerolgene-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RA0C_1743 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RA0C_1332 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RA0C_0775 cdp-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RA0C_1331 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RA0C_0706 haD-superfamily hydrolase, subfamily ib (pspase-like) K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rai00592]
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rai00230]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1528 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RA0C_0458 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA0C_0352 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RA0C_0399 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RA0C_0456 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RA0C_0398 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RA0C_0882 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RA0C_0883 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RA0C_0457 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RA0C_0608 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RA0C_0490 imp cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA0C_1470 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RA0C_0647 metallophosphoesterase(MPPE) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RA0C_0648 5'-nucleotidase domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RA0C_1447 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RA0C_0895 purine nucleoside phosphorylase i, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RA0C_1754 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA0C_2003 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA0C_0280 non-canonical purine ntp pyrophosphatase, rdgb/ham1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RA0C_0353 gmp synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RA0C_1065 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA0C_1066 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RA0C_0363 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RA0C_0434 (p)ppgpp synthetase i, spot/rela K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RA0C_0786 ppx/gppa phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RA0C_0463 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RA0C_0343 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RA0C_1358 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D RA0C_0284 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RA0C_1405 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0322 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0580 Transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0583 Transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_1168 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RA0C_1169 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RA0C_1170 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rai00240]
D RA0C_0667 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RA0C_0668 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RA0C_1111 dihydroorotase, multifunction al complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RA0C_1791 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RA0C_0394 orotidine 5'-phosphate decarboxylase K13421 UMPS; uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]
D RA0C_0194 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RA0C_2003 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA0C_1158 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RA0C_1017 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RA0C_0750 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RA0C_0469 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D RA0C_0647 metallophosphoesterase(MPPE) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RA0C_0648 5'-nucleotidase domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RA0C_1447 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RA0C_0426 purine or other phosphorylase family 1 K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D RA0C_1811 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RA0C_0555 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RA0C_1065 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA0C_1066 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RA0C_0343 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D RA0C_1701 cmp/dcmp deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RA0C_1429 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RA0C_0840 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rai00250]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0669 1-alkylgene-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RA0C_0986 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA0C_0401 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA0C_1520 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D RA0C_0078 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RA0C_0463 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RA0C_0608 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RA0C_0668 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RA0C_1239 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA0C_1072 glutamate dehydrogenase (nad) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RA0C_0932 deltagene-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_0667 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RA0C_1938 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA0C_0458 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rai00260]
D RA0C_0853 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA0C_1869 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RA0C_1338 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA0C_1000 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA0C_0370 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RA0C_0356 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_1865 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_0357 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RA0C_0691 2-aminogene-ketobutyrate coenzyme a ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RA0C_0724 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RA0C_0942 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA0C_0369 glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_1816 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
D RA0C_0775 cdp-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RA0C_0694 pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RA0C_1986 l-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RA0C_0439 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RA0C_0441 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rai00270]
D RA0C_1923 serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA0C_1103 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA0C_1924 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RA0C_0694 pyridoxal-5'-phosphate-dependent protein beta subunit K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D RA0C_2078 homocysteine s-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_2079 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_0735 methionine synthase (b12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RA0C_1706 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RA0C_1962 methylthioadenosine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D RA0C_2019 gaf sensor protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RA0C_2012 1-aminocyclopropanegene-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D RA0C_0853 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA0C_1869 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RA0C_1338 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA0C_1870 homoserine o-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RA0C_1868 cys/met metabolism pyridoxal-phosphate-dependent protein K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RA0C_2004 brancheD-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0863 malate dehydrogenase (nad) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RA0C_1986 l-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RA0C_0356 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_1865 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_0357 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rai00280]
D RA0C_2004 brancheD-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA0C_0601 transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1026 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RA0C_1654 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RA0C_0539 3-oxoacid CoA-transferase, a subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RA0C_0540 3-oxoacid CoA-transferase, b subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rai00290]
D RA0C_2004 brancheD-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:rai00300]
D RA0C_0853 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA0C_1869 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RA0C_1338 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA0C_0226 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RA0C_0330 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RA0C_0347 2,3,4,5-tetrahydropyridinegene,6-carboxylate n-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RA0C_1914 aminotransferase class-iii K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RA0C_0652 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RA0C_1282 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RA0C_1306 udp-n-acetylmuramoylalanyl-D-glutamate-gene, 6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA0C_0299 udp-n-acetylmuramoylalanyl-D-glutamylgene, 6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RA0C_1428 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:rai00310]
D RA0C_0629 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0537 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_1239 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rai00220]
D RA0C_1168 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RA0C_1169 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RA0C_1170 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_1072 glutamate dehydrogenase (nad) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_1914 aminotransferase class-iii K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:rai00330]
D RA0C_1996 orn/dap/arg decarboxylase 2 K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D RA0C_1997 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1259 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RA0C_2077 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D RA0C_0932 deltagene-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D RA0C_0551 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rai00350]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0897 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RA0C_1836 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RA0C_0899 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RA0C_1239 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:rai00360]
D RA0C_0658 oxidoreductase fad/nad(p)-binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D RA0C_1812 enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RA0C_0454 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0897 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RA0C_1659 catalase/peroxidase hpi K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RA0C_1311 alpha/beta hydrolase fold protein K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:rai00380]
D RA0C_0629 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0537 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1704 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RA0C_0243 Catalase K03781 katE; catalase [EC:1.11.1.6]
D RA0C_1659 catalase/peroxidase hpi K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rai00400]
D RA0C_2074 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RA0C_1453 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RA0C_0718 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RA0C_1006 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RA0C_0760 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RA0C_0447 chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RA0C_0446 anthranilate synthase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RA0C_0445 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RA0C_0442 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RA0C_0443 indolegene-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RA0C_0439 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RA0C_0441 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RA0C_0739 dahp synthetase i/kdsa K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D RA0C_0076 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RA0C_0568 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rai00410]
D RA0C_0753 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RA0C_1935 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:rai00430]
D RA0C_0436 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RA0C_0078 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D RA0C_2017 metal-dependent hydrolase of the beta-lactamase superfamily i, phnp protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rai00450]
D RA0C_2078 homocysteine s-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_2079 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_0735 methionine synthase (b12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RA0C_1656 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RA0C_0106 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RA0C_1037 faD-dependent pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RA0C_0313 thioredoxin domain-containing protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RA0C_0610 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rai00460]
D RA0C_0436 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RA0C_0669 1-alkylgene-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RA0C_1000 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rai00470]
D RA0C_1428 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RA0C_1871 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA0C_0866 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RA0C_1304 udp-n-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA0C_0652 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RA0C_1282 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rai00480]
D RA0C_0436 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RA0C_0841 peptidase m1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA0C_0758 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RA0C_0407 isocitrate dehydrogenase, nADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RA0C_0914 peroxiredoxin K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rai00540]
D RA0C_0847 acyl-(acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RA0C_0848 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D RA0C_0845 udpgene-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase, non-repeat region K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RA0C_1083 metallophosphoesterase(MPPE) K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RA0C_0964 lipiD-a-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RA0C_0896 lipiD-a-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RA0C_0309 kpsf/gutq family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RA0C_0086 2-dehydrogene-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RA0C_1157 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RA0C_0916 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RA0C_1635 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RA0C_0560 lipid a biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RA0C_0083 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
C 00542 O-Antigen repeat unit biosynthesis [PATH:rai00542]
D RA0C_1488 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosaminegene-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rai00541]
D RA0C_0599 udp-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RA0C_1716 udp-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D RA0C_1769 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RA0C_1617 naD-dependent epimerase/dehydratase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RA0C_1728 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0972 glucosegene-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0973 dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA0C_0974 dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RA0C_1323 dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RA0C_1253 mannose-6-phosphate isomerase, type 2 K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D RA0C_1379 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domaini K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RA0C_1531 mannosegene-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D RA0C_0994 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D RA0C_1443 putative dehydrogenases-related protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D RA0C_0600 degt/dnrj/eryc1/strs aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D RA0C_0995 naD-dependent epimerase/dehydratase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:rai00550]
D RA0C_1416 udp-n-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA0C_1423 udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA0C_1301 udp-n-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RA0C_1304 udp-n-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA0C_1306 udp-n-acetylmuramoylalanyl-D-glutamate-gene, 6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA0C_1871 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA0C_0299 udp-n-acetylmuramoylalanyl-D-glutamylgene, 6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RA0C_1428 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RA0C_1328 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RA0C_0213 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_0643 phosphoesterase pa-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_1305 phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA0C_1302 udp-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RA0C_0239 monofunctional biosynthetic pepti doglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RA0C_1456 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RA0C_1629 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RA0C_1307 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA0C_0292 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA0C_0690 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rai00552]
D RA0C_0213 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_0643 phosphoesterase pa-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_1488 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosaminegene-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rai00543]
D RA0C_1488 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosaminegene-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D RA0C_1106 membrane bound o-acyl transferase mboat family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D RA0C_1923 serine o-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RA0C_1103 transferase hexapeptide repeat containing protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rai00730]
D RA0C_0703 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA0C_0710 thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RA0C_1599 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RA0C_0471 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RA0C_2029 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0772 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_1995 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RA0C_0284 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rai00740]
D RA0C_1735 GTP cyclohydrolase ii K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA0C_1859 3,4-dihydroxygene-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RA0C_1956 riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RA0C_1472 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RA0C_1265 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RA0C_2000 riboflavin biosynthesis protein ribf K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RA0C_0728 nudix hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rai00750]
D RA0C_0756 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RA0C_0357 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RA0C_0801 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rai00760]
D RA0C_1663 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RA0C_0895 purine nucleoside phosphorylase i, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RA0C_0647 metallophosphoesterase(MPPE) K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D RA0C_0648 5'-nucleotidase domain-containing protein K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RA0C_1447 stationary-phase survival protein sure K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RA0C_1115 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RA0C_1919 nad+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RA0C_0564 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RA0C_0223 silent information regulator protein sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RA0C_1178 ATP-nad/acox kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RA0C_1239 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rai00770]
D RA0C_1779 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RA0C_1935 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RA0C_1410 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RA0C_1614 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RA0C_1872 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RA0C_1695 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RA0C_0731 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RA0C_2004 brancheD-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA0C_0753 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rai00780]
D RA0C_1242 3-oxoacyl-(acyl-carrier-protein) synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_2081 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_1432 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA0C_0263 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RA0C_2082 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RA0C_2084 aminotransferase class-iii K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RA0C_2083 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RA0C_1597 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D RA0C_1497 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rai00785]
D RA0C_0497 lipoate-protein ligase b K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RA0C_0766 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_2037 pyruvate dehydrogenase (acetyl-transferring) e1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RA0C_0822 pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RA0C_2036 catalytic domain-containing protein of components of various dehydrogenase complexes K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RA0C_0630 2-oxoglutarate dehydrogenase, e1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RA0C_0629 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RA0C_0601 transketolase domain-containing protein K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RA0C_0942 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RA0C_0369 glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA0C_1816 glycine cleavage system h protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rai00790]
D RA0C_1715 GTP cyclohydrolase i K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D RA0C_2029 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0772 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_1275 alkaline phosphatase d K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RA0C_1815 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RA0C_0807 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RA0C_0749 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RA0C_0970 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RA0C_1574 folc bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RA0C_1735 GTP cyclohydrolase ii K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA0C_1859 3,4-dihydroxygene-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RA0C_1384 aminodeoxychorismate synthase, subunit i K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D RA0C_1385 aminotransferase class iv K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D RA0C_1082 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RA0C_0871 radical sam domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:rai00670]
D RA0C_0970 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RA0C_0423 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RA0C_1002 5,10-methylenetetrahydrofolate dehydrogenase (nadp+), methenyltetrahydrofolate K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RA0C_1000 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RA0C_0399 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RA0C_0490 imp cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA0C_0865 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RA0C_0369 glycine cleavage system t protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RA0C_2078 homocysteine s-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_2079 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_0840 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RA0C_2080 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RA0C_1218 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rai00860]
D RA0C_1643 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RA0C_2014 glutamategene-semialdehydegene,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RA0C_0867 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RA0C_1642 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RA0C_1477 uroporphyrinogen-iii synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RA0C_1641 uroporphyrinogen iii synthase hem4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RA0C_1640 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RA0C_0572 oxygen-independent coproporphyrinogen iii oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RA0C_0304 uncharacterized protein family upf0093 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RA0C_1685 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RA0C_1994 ATP/cobalamin adenosyl transferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rai00130]
D RA0C_1991 chorismate binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D RA0C_1353 2-succinyl-6-hydroxygene, 4-cyclohexadienegene-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RA0C_0936 amp-dependent synthetase and ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RA0C_0507 1,4-dihydroxygene-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RA0C_1990 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RA0C_0508 1,4-dihydroxygene-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RA0C_0897 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rai00900]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_1861 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D RA0C_0656 ghmp kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D RA0C_0880 ghmp kinase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D RA0C_0368 isopentenyl-diphosphate delta-isomerase, type 1 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RA0C_0708 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RA0C_1328 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rai00907]
D RA0C_1654 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RA0C_0574 transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RA0C_0584 transketolase central region K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rai00523]
D RA0C_1728 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0972 glucosegene-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0973 dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA0C_0974 dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RA0C_1323 dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RA0C_1991 chorismate binding protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D RA0C_0973 dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rai00261]
D RA0C_0853 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RA0C_1869 homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D RA0C_1338 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RA0C_0226 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RA0C_0330 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rai00521]
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D RA0C_0919 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RA0C_1728 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0972 glucosegene-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0973 dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RA0C_0974 dtdp-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RA0C_1323 dtdp-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RA0C_1843 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RA0C_1623 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rai00525]
D RA0C_1728 nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0972 glucosegene-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RA0C_0973 dtdp-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rai00401]
D RA0C_0076 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RA0C_0447 chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RA0C_0446 anthranilate synthase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RA0C_1584 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA0C_1432 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA0C_0263 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RA0C_0978 acyl carrier protein K02078 acpP; acyl carrier protein
D RA0C_1243 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D RA0C_1706 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rai00362]
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RA0C_0266 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RA0C_0537 acyl-CoA dehydrogenase domain-containing protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RA0C_0454 3-hydroxyacyl-CoA dehydrogenase naD-binding protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:rai00625]
D RA0C_1297 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D RA0C_0267 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rai00643]
D RA0C_1836 homogentisate 12-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D RA0C_0899 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00791 Atrazine degradation
D RA0C_1168 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RA0C_1169 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RA0C_1170 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rai03020]
D RA0C_1805 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA0C_1806 DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA0C_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rai03010]
D RA0C_0494 SSU ribosomal protein s1p K02945 RP-S1; small subunit ribosomal protein S1
D RA0C_1763 SSU ribosomal protein s2p K02967 RP-S2; small subunit ribosomal protein S2
D RA0C_1150 SSU ribosomal protein s3p K02982 RP-S3; small subunit ribosomal protein S3
D RA0C_1131 SSU ribosomal protein s4p K02986 RP-S4; small subunit ribosomal protein S4
D RA0C_1139 SSU ribosomal protein s5p K02988 RP-S5; small subunit ribosomal protein S5
D RA0C_0684 SSU ribosomal protein s6p K02990 RP-S6; small subunit ribosomal protein S6
D RA0C_1671 SSU ribosomal protein s7p K02992 RP-S7; small subunit ribosomal protein S7
D RA0C_1142 SSU ribosomal protein s8p K02994 RP-S8; small subunit ribosomal protein S8
D RA0C_1764 SSU ribosomal protein s9p K02996 RP-S9; small subunit ribosomal protein S9
D RA0C_1673 SSU ribosomal protein s10p K02946 RP-S10; small subunit ribosomal protein S10
D RA0C_1132 SSU ribosomal protein s11p K02948 RP-S11; small subunit ribosomal protein S11
D RA0C_1670 SSU ribosomal protein s12p K02950 RP-S12; small subunit ribosomal protein S12
D RA0C_1133 SSU ribosomal protein s13p K02952 RP-S13; small subunit ribosomal protein S13
D RA0C_1143 SSU ribosomal protein s14p K02954 RP-S14; small subunit ribosomal protein S14
D RA0C_0859 SSU ribosomal protein s15p K02956 RP-S15; small subunit ribosomal protein S15
D RA0C_0869 SSU ribosomal protein s16p K02959 RP-S16; small subunit ribosomal protein S16
D RA0C_1147 SSU ribosomal protein s17p K02961 RP-S17; small subunit ribosomal protein S17
D RA0C_0683 SSU ribosomal protein s18p K02963 RP-S18; small subunit ribosomal protein S18
D RA0C_1117 SSU ribosomal protein s20p K02968 RP-S20; small subunit ribosomal protein S20
D RA0C_1784 SSU ribosomal protein s21p K02970 RP-S21; small subunit ribosomal protein S21
D RA0C_1797 LSU ribosomal protein l1p K02863 RP-L1; large subunit ribosomal protein L1
D RA0C_1152 LSU ribosomal protein l2p K02886 RP-L2; large subunit ribosomal protein L2
D RA0C_1155 LSU ribosomal protein l3p K02906 RP-L3; large subunit ribosomal protein L3
D RA0C_1154 LSU ribosomal protein l4p K02926 RP-L4; large subunit ribosomal protein L4
D RA0C_1144 LSU ribosomal protein l5p K02931 RP-L5; large subunit ribosomal protein L5
D RA0C_1141 LSU ribosomal protein l6p K02933 RP-L6; large subunit ribosomal protein L6
D RA0C_1799 LSU ribosomal protein l12p K02935 RP-L7; large subunit ribosomal protein L7/L12
D RA0C_0682 LSU ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D RA0C_1798 LSU ribosomal protein l10p K02864 RP-L10; large subunit ribosomal protein L10
D RA0C_1796 LSU ribosomal protein l11p K02867 RP-L11; large subunit ribosomal protein L11
D RA0C_1765 LSU ribosomal protein l13p K02871 RP-L13; large subunit ribosomal protein L13
D RA0C_1146 LSU ribosomal protein l14p K02874 RP-L14; large subunit ribosomal protein L14
D RA0C_1137 LSU ribosomal protein l15p K02876 RP-L15; large subunit ribosomal protein L15
D RA0C_1149 LSU ribosomal protein l16p K02878 RP-L16; large subunit ribosomal protein L16
D RA0C_1129 LSU ribosomal protein l17p K02879 RP-L17; large subunit ribosomal protein L17
D RA0C_1140 LSU ribosomal protein l18p K02881 RP-L18; large subunit ribosomal protein L18
D RA0C_0422 LSU ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D RA0C_0453 LSU ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20
D RA0C_1421 LSU ribosomal protein l21p K02888 RP-L21; large subunit ribosomal protein L21
D RA0C_1151 LSU ribosomal protein l22p K02890 RP-L22; large subunit ribosomal protein L22
D RA0C_1153 LSU ribosomal protein l23p K02892 RP-L23; large subunit ribosomal protein L23
D RA0C_1145 LSU ribosomal protein l24p K02895 RP-L24; large subunit ribosomal protein L24
D RA0C_1529 LSU ribosomal protein l25p K02897 RP-L25; large subunit ribosomal protein L25
D RA0C_1420 LSU ribosomal protein l27p K02899 RP-L27; large subunit ribosomal protein L27
D RA0C_1479 LSU ribosomal protein l28p K02902 RP-L28; large subunit ribosomal protein L28
D RA0C_1148 LSU ribosomal protein l29p K02904 RP-L29; large subunit ribosomal protein L29
D RA0C_1138 LSU ribosomal protein l30p K02907 RP-L30; large subunit ribosomal protein L30
D RA0C_1009 LSU ribosomal protein l31p K02909 RP-L31; large subunit ribosomal protein L31
D RA0C_1262 LSU ribosomal protein l32p K02911 RP-L32; large subunit ribosomal protein L32
D RA0C_1480 LSU ribosomal protein l33p K02913 RP-L33; large subunit ribosomal protein L33
D RA0C_1269 LSU ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34
D RA0C_0452 LSU ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35
D RA0C_1134 LSU ribosomal protein l36p K02919 RP-L36; large subunit ribosomal protein L36
D RA0C_1321 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1829 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1061 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1060 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1320 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1830 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1059 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1831 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1319 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rai00970]
D RA0C_1828 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA0C_0466 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA0C_0373 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_0606 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_0790 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_1517 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RA0C_0700 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RA0C_1069 trnG; tRNA-Gly K14222 tRNA-Cys; tRNA Cys
D RA0C_1860 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA0C_1118 trnQ; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA0C_1119 trnQ; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA0C_1789 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA0C_1569 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA0C_1204 trnH; tRNA-His K14226 tRNA-His; tRNA His
D RA0C_1827 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RA0C_1570 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_2016 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_1568 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_0717 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA0C_0768 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0644 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0819 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0855 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RA0C_0791 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA0C_0670 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA0C_0108 trnV; tRNA-Val K14233 tRNA-Ser; tRNA Ser
D RA0C_0792 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA0C_1787 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA0C_1790 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA0C_1793 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RA0C_1788 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RA0C_1572 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D RA0C_1573 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D RA0C_1091 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RA0C_0654 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RA0C_1844 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA0C_0400 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA0C_1834 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RA0C_1655 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA0C_0449 ser-tRNA(thr) hydrolase/threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA0C_1222 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA0C_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA0C_0610 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA0C_0865 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RA0C_0924 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA0C_1213 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA0C_1394 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA0C_0461 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA0C_1012 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA0C_0910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA0C_0563 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA0C_1931 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA0C_0592 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA0C_0886 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA0C_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rai03060]
D RA0C_1136 protein translocase subunit secy/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RA0C_1794 preprotein translocase, sece subunit K03073 secE; preprotein translocase subunit SecE
D RA0C_0571 protein translocase subunit secf, protein translocase subunit secd K12257 secDF; SecD/SecF fusion protein
D RA0C_1710 protein translocase subunit yajc K03210 yajC; preprotein translocase subunit YajC
D RA0C_1016 protein translocase subunit yidc K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA0C_1619 protein translocase subunit seca K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA0C_0483 signal recognition particle subunit ffh/srp54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA0C_1482 signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D RA0C_1731 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RA0C_1732 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RA0C_0329 signal peptidase i K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RA0C_1396 peptidase a8 signal peptidase ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rai04122]
D RA0C_0703 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA0C_1561 tRNA (5-methylaminomethylgene-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RA0C_1457 uba/thif-type nad/fad binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rai03018]
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA0C_0860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RA0C_0674 dead/deah box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RA0C_0612 dead/deah box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RA0C_1438 rnase r K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RA0C_0524 dead/deah box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA0C_0864 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_0308 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_1757 Transcription termination factor K03628 rho; transcription termination factor Rho
D RA0C_0428 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RA0C_0686 chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D RA0C_0589 chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA0C_0787 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA0C_0699 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA0C_0701 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA0C_2092 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rai03030]
D RA0C_1593 DNA polymerase iii, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0776 exonuclease rnase t and DNA polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0858 DNA polymerase iii, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA0C_0740 DNA polymerase iii, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA0C_0294 DNA polymerase iii subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA0C_0340 DNA polymerase iii, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA0C_0593 DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA0C_0894 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RA0C_0062 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_0893 ribonuclease h K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RA0C_1015 ribonuclease h K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rai03410]
D RA0C_1087 endonuclease iii K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RA0C_2006 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RA0C_1848 a/g-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RA0C_0444 DNAgene-methyladenine glycosylase i K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RA0C_0835 exodeoxyribonuclease iii xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_1114 exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rai03420]
D RA0C_1949 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RA0C_0084 excinuclease ABC, a subunit K03701 uvrA; excinuclease ABC subunit A
D RA0C_0492 excinuclease ABC, a subunit K03701 uvrA; excinuclease ABC subunit A
D RA0C_1522 excinuclease ABC, b subunit K03702 uvrB; excinuclease ABC subunit B
D RA0C_1693 excinuclease ABC, c subunit K03703 uvrC; excinuclease ABC subunit C
D RA0C_0415 uvrd/rep helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rai03430]
D RA0C_1491 DNA mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D RA0C_1342 DNA mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D RA0C_0415 uvrd/rep helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA0C_1114 exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_0858 DNA polymerase iii, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA0C_0593 DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA0C_0740 DNA polymerase iii, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA0C_0340 DNA polymerase iii, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA0C_0294 DNA polymerase iii subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA0C_1593 DNA polymerase iii, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0776 exonuclease rnase t and DNA polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RA0C_0016 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_2086 Site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:rai03440]
D RA0C_1114 exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_0624 DNA replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D RA0C_0410 recombination protein recr K06187 recR; recombination protein RecR
D RA0C_1019 reca protein K03553 recA; recombination protein RecA
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_1080 holliday junction DNA helicase subunit ruva K03550 ruvA; holliday junction DNA helicase RuvA
D RA0C_1697 holliday junction DNA helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RA0C_0858 DNA polymerase iii, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA0C_0593 DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA0C_0740 DNA polymerase iii, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA0C_0340 DNA polymerase iii, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA0C_0294 DNA polymerase iii subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA0C_1593 DNA polymerase iii, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0776 exonuclease rnase t and DNA polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rai03250]
D RA0C_0264 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rai02010]
D RA0C_1251 mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RA0C_0873 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RA0C_0874 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RA0C_1876 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RA0C_0770 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RA0C_0745 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RA0C_0335 permease yjgp/yjgq family protein K07091 lptF; lipopolysaccharide export system permease protein
D RA0C_1496 permease yjgp/yjgq family protein K11720 lptG; lipopolysaccharide export system permease protein
D RA0C_1993 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RA0C_1964 nitrous oxide reductase maturation transmembrane protein nosy K19341 nosY; Cu-processing system permease protein
D RA0C_1965 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D RA0C_0215 cell division protein ftsx K09811 ftsX; cell division transport system permease protein
D RA0C_1268 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D RA0C_1755 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RA0C_1201 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RA0C_1929 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:rai03070]
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_0571 protein translocase subunit secf, protein translocase subunit secd K12257 secDF; SecD/SecF fusion protein
D RA0C_1794 preprotein translocase, sece subunit K03073 secE; preprotein translocase subunit SecE
D RA0C_1136 protein translocase subunit secy/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RA0C_1710 protein translocase subunit yajc K03210 yajC; preprotein translocase subunit YajC
D RA0C_1016 protein translocase subunit yidc K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA0C_1619 protein translocase subunit seca K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA0C_1482 signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D RA0C_0483 signal recognition particle subunit ffh/srp54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA0C_1731 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RA0C_1732 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rai02020]
D RA0C_1946 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RA0C_2029 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0772 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_1275 alkaline phosphatase d K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RA0C_1215 protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D RA0C_0204 chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D RA0C_1273 tonb-dependent receptor plug K19611 fepA; ferric enterobactin receptor
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_1833 RNA polymerase, sigma 54 subunit, rpon/sigl K03092 rpoN; RNA polymerase sigma-54 factor
D RA0C_1975 transcriptional regulator, crp/fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA0C_1958 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D RA0C_1971 cytochrome c class i K08738 CYC; cytochrome c
D RA0C_0498 hypothetical protein K08738 CYC; cytochrome c
D RA0C_1775 cytochrome c oxidase, cbb3-type, subunit i K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D RA0C_1774 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RA0C_1773 cytochrome c class i K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_0997 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RA0C_0205 protein tyrosine phosphatase PTP K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RA0C_0996 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RA0C_1490 protein involved in gliding motility epsb K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rai02024]
D RA0C_0447 chorismate binding protein K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RA0C_0446 anthranilate synthase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RA0C_0879 amp-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0615 polyprenyl synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_1975 transcriptional regulator, crp/fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA0C_1735 GTP cyclohydrolase ii K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RA0C_1956 riboflavin biosynthesis protein ribd K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RA0C_1378 rnd efflux system, outer membrane lipoprotein, nodt family K18139 oprM; outer membrane protein, multidrug efflux system
D RA0C_1016 protein translocase subunit yidc K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA0C_0571 protein translocase subunit secf, protein translocase subunit secd K12257 secDF; SecD/SecF fusion protein
D RA0C_1794 preprotein translocase, sece subunit K03073 secE; preprotein translocase subunit SecE
D RA0C_1136 protein translocase subunit secy/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RA0C_1710 protein translocase subunit yajc K03210 yajC; preprotein translocase subunit YajC
D RA0C_1619 protein translocase subunit seca K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA0C_1482 signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D RA0C_0483 signal recognition particle subunit ffh/srp54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D RA0C_1631 ompa/motb domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rai02040]
D RA0C_1631 ompa/motb domain protein K02557 motB; chemotaxis protein MotB
D RA0C_0913 RNA polymerase, sigma 70 subunit, rpod subfamily K03086 rpoD; RNA polymerase primary sigma factor
D RA0C_1833 RNA polymerase, sigma 54 subunit, rpon/sigl K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rai04980]
D RA0C_1994 ATP/cobalamin adenosyl transferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RA0C_2078 homocysteine s-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RA0C_2079 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rai01501]
D RA0C_1736 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RA0C_0696 peptidase m56 blar1 K02172 blaR1; bla regulator protein blaR1
D RA0C_0729 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_0697 transcriptional repressor, copy family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_1376 efflux transporter, rnd family, mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1277 Membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1378 rnd efflux system, outer membrane lipoprotein, nodt family K18139 oprM; outer membrane protein, multidrug efflux system
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_1456 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RA0C_1629 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RA0C_1307 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rai01502]
D RA0C_1871 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA0C_1428 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RA0C_0299 udp-n-acetylmuramoylalanyl-D-glutamylgene, 6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RA0C_1305 phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA0C_1302 udp-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rai01503]
D RA0C_0083 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RA0C_1404 hypothetical protein K06079 cutF; copper homeostasis protein (lipoprotein)
D RA0C_0115 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_1120 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_1215 protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D RA0C_0264 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA0C_1376 efflux transporter, rnd family, mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1277 Membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_0847 acyl-(acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rai01000]
C 01001 Protein kinases [BR:rai01001]
D RA0C_1856 pasta domain containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RA0C_0996 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RA0C_1490 protein involved in gliding motility epsb K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RA0C_1542 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rai01009]
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:rai01002]
D RA0C_1396 peptidase a8 signal peptidase ii K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RA0C_0495 peptidase c1b bleomycin hydrolase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D RA0C_0353 gmp synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RA0C_1583 amino acid/amide ABC transporter substrate-binding protein, haat family K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D RA0C_1545 nlp/p60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RA0C_1633 nlp/p60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D RA0C_0346 nlp/p60 protein K13695 nlpC; probable lipoprotein NlpC
D RA0C_0458 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RA0C_1938 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RA0C_0986 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA0C_0401 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RA0C_1004 thij/pfpi domain-containing protein K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D RA0C_0841 peptidase m1 membrane alanine aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RA0C_0804 oligopeptidase a K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RA0C_0515 peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RA0C_0774 endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D RA0C_0413 peptidase m16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RA0C_0414 peptidase m16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RA0C_1653 peptidase t K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D RA0C_0758 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D RA0C_0567 methionine aminopeptidase, type i K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RA0C_0931 xaa-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RA0C_1499 ATP-dependent metalloprotease ftsh K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D RA0C_1518 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RA0C_0696 peptidase m56 blar1 K02172 blaR1; bla regulator protein blaR1
D RA0C_1215 protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D RA0C_0327 peptidase s8 and s53 subtilisin kexin sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D RA0C_1085 prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D RA0C_0966 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RA0C_2015 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RA0C_1478 oligopeptidase b K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D RA0C_0292 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA0C_0690 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA0C_0061 endopeptidase clp K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RA0C_1316 ATP-dependent protease la K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RA0C_0329 signal peptidase i K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RA0C_0551 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RA0C_1448 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RA0C_0230 Periplasmic protease/Dipeptidyl aminopeptidases/acylaminoacyl-peptidases/Periplasmic component of the Tol biopolymer transport system K08676 tri; tricorn protease [EC:3.4.21.-]
D RA0C_0808 signal peptide peptidase sppa, 67k type K04773 sppA; protease IV [EC:3.4.21.-]
D RA0C_0202 dipeptidase e K05995 pepE; dipeptidase E [EC:3.4.13.21]
D RA0C_1341 rhomboid family protein K07059 K07059; rhomboid family protein
D RA0C_1539 peptidase u61 lD-carboxypeptidase a K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RA0C_0436 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RA0C_1216 peptidase u32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D RA0C_1963 proteinase inhibitor i11 ecotin K08276 eco; ecotin
C 01003 Glycosyltransferases [BR:rai01003]
D RA0C_1493 glycosyl transferase family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D RA0C_1936 starch synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RA0C_0239 monofunctional biosynthetic pepti doglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RA0C_1456 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RA0C_1488 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosaminegene-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rai01005]
D RA0C_0847 acyl-(acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RA0C_0964 lipiD-a-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RA0C_0848 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D RA0C_0845 udpgene-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase, non-repeat region K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RA0C_1083 metallophosphoesterase(MPPE) K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RA0C_0896 lipiD-a-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RA0C_0560 lipid a biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RA0C_1635 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RA0C_0083 sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RA0C_0086 2-dehydrogene-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RA0C_0916 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RA0C_1157 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RA0C_0309 kpsf/gutq family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RA0C_0349 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D RA0C_1488 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosaminegene-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rai01011]
D RA0C_1416 udp-n-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RA0C_1423 udp-n-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RA0C_1301 udp-n-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RA0C_1304 udp-n-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RA0C_1306 udp-n-acetylmuramoylalanyl-D-glutamate-gene, 6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RA0C_1428 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D RA0C_1871 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RA0C_0866 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RA0C_1539 peptidase u61 lD-carboxypeptidase a K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RA0C_1305 phospho-n-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RA0C_1302 udp-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RA0C_0213 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_0643 phosphoesterase pa-phosphatase related protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RA0C_1456 peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RA0C_1629 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RA0C_1307 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA0C_0292 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA0C_0690 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RA0C_0239 monofunctional biosynthetic pepti doglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RA0C_1545 nlp/p60 protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RA0C_1583 amino acid/amide ABC transporter substrate-binding protein, haat family K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D RA0C_0651 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RA0C_0834 rare lipoprotein a K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RA0C_0115 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_1120 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_0793 n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampd K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rai01004]
D RA0C_1584 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RA0C_0981 beta-ketoacyl-acyl-carrier-protein synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_0257 beta-ketoacyl-acyl-carrier-protein synthase iii K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_0397 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RA0C_1242 3-oxoacyl-(acyl-carrier-protein) synthase ii K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_2081 beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RA0C_1432 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RA0C_0848 3-hydroxyacyl-(acyl-carrier-protein) dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D RA0C_0263 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RA0C_1035 2-nitropropane dioxygenase npd K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RA0C_0519 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RA0C_0879 amp-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0615 polyprenyl synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_1743 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:rai01006]
D RA0C_0708 Geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RA0C_1328 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RA0C_1417 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RA0C_0508 1,4-dihydroxygene-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:rai01007]
D RA0C_0654 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RA0C_1091 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RA0C_0886 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA0C_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RA0C_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA0C_1012 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA0C_0610 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA0C_1394 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA0C_0924 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA0C_1213 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA0C_0461 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA0C_0400 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA0C_1834 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RA0C_0563 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA0C_1655 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA0C_1222 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA0C_0910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA0C_0449 ser-tRNA(thr) hydrolase/threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA0C_1844 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA0C_1931 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA0C_0592 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA0C_1393 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0918 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0315 aminotransferase class i and ii K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RA0C_0691 2-aminogene-ketobutyrate coenzyme a ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RA0C_0724 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D RA0C_2082 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RA0C_1259 ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D RA0C_1914 aminotransferase class-iii K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RA0C_2084 aminotransferase class-iii K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RA0C_2014 glutamategene-semialdehydegene,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RA0C_2004 brancheD-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RA0C_0357 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RA0C_0600 degt/dnrj/eryc1/strs aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rai00194]
D RA0C_2002 ATPase, f1 complex, delta/epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RA0C_2001 ATP synthase f1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RA0C_0634 ATP synthase f1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RA0C_0635 ATP synthase f1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RA0C_0636 ATP synthase f1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RA0C_0637 ATP synthase f0 subcomplex b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RA0C_0638 ATP synthase f0 subcomplex c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RA0C_0639 ATP synthase f0 subcomplex a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rai03000]
D RA0C_1705 transcriptional regulator, lysr family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RA0C_1279 regulatory protein tetr K09017 rutR; TetR/AcrR family transcriptional regulator
D RA0C_0209 transcriptional regulator, asnc family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D RA0C_1077 transcriptional regulator, asnc family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RA0C_0265 regulatory protein marr K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RA0C_1912 ferric uptake regulator, fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RA0C_1975 transcriptional regulator, crp/fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RA0C_1992 transcriptional regulator, crp/fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RA0C_0317 transcriptional regulator, crp/fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RA0C_1523 transcriptional regulator, crp/fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RA0C_1977 transcriptional regulator, badm/rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RA0C_1987 transcriptional regulator, padr family K10947 K10947; PadR family transcriptional regulator
D RA0C_0224 iron (metal) dependent repressor, dtxr family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D RA0C_0729 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_0697 transcriptional repressor, copy family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_1497 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RA0C_0003 putative transcriptional regulator with C-terminal CBS domains/Predicted transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RA0C_0123 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RA0C_0332 parb-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RA0C_0757 hypothetical protein K07735 algH; putative transcriptional regulator
D RA0C_1395 dnak suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D RA0C_1310 mraz protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rai03021]
D RA0C_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RA0C_1805 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA0C_1806 DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA0C_0913 RNA polymerase, sigma 70 subunit, rpod subfamily K03086 rpoD; RNA polymerase primary sigma factor
D RA0C_1960 RNA polymerase, sigmagene4 subunit, ecf subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RA0C_0094 RNA polymerase, sigmagene4 subunit, ecf subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RA0C_0767 RNA polymerase, sigmagene4 subunit, ecf subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RA0C_1833 RNA polymerase, sigma 54 subunit, rpon/sigl K03092 rpoN; RNA polymerase sigma-54 factor
D RA0C_1577 nusa antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RA0C_1708 nusb antitermination factor K03625 nusB; transcription antitermination protein NusB
D RA0C_1795 transcription antitermination protein nusg K02601 nusG; transcription termination/antitermination protein NusG
D RA0C_1395 dnak suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D RA0C_0812 transcription elongation factor grea K03624 greA; transcription elongation factor GreA
D RA0C_1757 Transcription termination factor K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rai03019]
D RA0C_1850 ribonuclease, rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D RA0C_1241 rnase iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RA0C_0428 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D RA0C_1438 rnase r K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RA0C_0674 dead/deah box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RA0C_0612 dead/deah box helicase domain protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RA0C_0524 dead/deah box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA0C_0864 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_0308 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA0C_0860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RA0C_1757 Transcription termination factor K03628 rho; transcription termination factor Rho
D RA0C_0828 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D RA0C_0686 chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D RA0C_0589 chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA0C_0787 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RA0C_0699 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA0C_0701 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RA0C_2092 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:rai03011]
D RA0C_0494 SSU ribosomal protein s1p K02945 RP-S1; small subunit ribosomal protein S1
D RA0C_1763 SSU ribosomal protein s2p K02967 RP-S2; small subunit ribosomal protein S2
D RA0C_1150 SSU ribosomal protein s3p K02982 RP-S3; small subunit ribosomal protein S3
D RA0C_1131 SSU ribosomal protein s4p K02986 RP-S4; small subunit ribosomal protein S4
D RA0C_1139 SSU ribosomal protein s5p K02988 RP-S5; small subunit ribosomal protein S5
D RA0C_0684 SSU ribosomal protein s6p K02990 RP-S6; small subunit ribosomal protein S6
D RA0C_1671 SSU ribosomal protein s7p K02992 RP-S7; small subunit ribosomal protein S7
D RA0C_1142 SSU ribosomal protein s8p K02994 RP-S8; small subunit ribosomal protein S8
D RA0C_1764 SSU ribosomal protein s9p K02996 RP-S9; small subunit ribosomal protein S9
D RA0C_1673 SSU ribosomal protein s10p K02946 RP-S10; small subunit ribosomal protein S10
D RA0C_1132 SSU ribosomal protein s11p K02948 RP-S11; small subunit ribosomal protein S11
D RA0C_1670 SSU ribosomal protein s12p K02950 RP-S12; small subunit ribosomal protein S12
D RA0C_1133 SSU ribosomal protein s13p K02952 RP-S13; small subunit ribosomal protein S13
D RA0C_1143 SSU ribosomal protein s14p K02954 RP-S14; small subunit ribosomal protein S14
D RA0C_0859 SSU ribosomal protein s15p K02956 RP-S15; small subunit ribosomal protein S15
D RA0C_0869 SSU ribosomal protein s16p K02959 RP-S16; small subunit ribosomal protein S16
D RA0C_1147 SSU ribosomal protein s17p K02961 RP-S17; small subunit ribosomal protein S17
D RA0C_0683 SSU ribosomal protein s18p K02963 RP-S18; small subunit ribosomal protein S18
D RA0C_1117 SSU ribosomal protein s20p K02968 RP-S20; small subunit ribosomal protein S20
D RA0C_1784 SSU ribosomal protein s21p K02970 RP-S21; small subunit ribosomal protein S21
D RA0C_1797 LSU ribosomal protein l1p K02863 RP-L1; large subunit ribosomal protein L1
D RA0C_1152 LSU ribosomal protein l2p K02886 RP-L2; large subunit ribosomal protein L2
D RA0C_1155 LSU ribosomal protein l3p K02906 RP-L3; large subunit ribosomal protein L3
D RA0C_1154 LSU ribosomal protein l4p K02926 RP-L4; large subunit ribosomal protein L4
D RA0C_1144 LSU ribosomal protein l5p K02931 RP-L5; large subunit ribosomal protein L5
D RA0C_1141 LSU ribosomal protein l6p K02933 RP-L6; large subunit ribosomal protein L6
D RA0C_0682 LSU ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D RA0C_1798 LSU ribosomal protein l10p K02864 RP-L10; large subunit ribosomal protein L10
D RA0C_1796 LSU ribosomal protein l11p K02867 RP-L11; large subunit ribosomal protein L11
D RA0C_1799 LSU ribosomal protein l12p K02935 RP-L7; large subunit ribosomal protein L7/L12
D RA0C_1765 LSU ribosomal protein l13p K02871 RP-L13; large subunit ribosomal protein L13
D RA0C_1146 LSU ribosomal protein l14p K02874 RP-L14; large subunit ribosomal protein L14
D RA0C_1137 LSU ribosomal protein l15p K02876 RP-L15; large subunit ribosomal protein L15
D RA0C_1149 LSU ribosomal protein l16p K02878 RP-L16; large subunit ribosomal protein L16
D RA0C_1129 LSU ribosomal protein l17p K02879 RP-L17; large subunit ribosomal protein L17
D RA0C_1140 LSU ribosomal protein l18p K02881 RP-L18; large subunit ribosomal protein L18
D RA0C_0422 LSU ribosomal protein K02884 RP-L19; large subunit ribosomal protein L19
D RA0C_0453 LSU ribosomal protein K02887 RP-L20; large subunit ribosomal protein L20
D RA0C_1421 LSU ribosomal protein l21p K02888 RP-L21; large subunit ribosomal protein L21
D RA0C_1151 LSU ribosomal protein l22p K02890 RP-L22; large subunit ribosomal protein L22
D RA0C_1153 LSU ribosomal protein l23p K02892 RP-L23; large subunit ribosomal protein L23
D RA0C_1145 LSU ribosomal protein l24p K02895 RP-L24; large subunit ribosomal protein L24
D RA0C_1420 LSU ribosomal protein l27p K02899 RP-L27; large subunit ribosomal protein L27
D RA0C_1479 LSU ribosomal protein l28p K02902 RP-L28; large subunit ribosomal protein L28
D RA0C_1148 LSU ribosomal protein l29p K02904 RP-L29; large subunit ribosomal protein L29
D RA0C_1138 LSU ribosomal protein l30p K02907 RP-L30; large subunit ribosomal protein L30
D RA0C_1009 LSU ribosomal protein l31p K02909 RP-L31; large subunit ribosomal protein L31
D RA0C_1262 LSU ribosomal protein l32p K02911 RP-L32; large subunit ribosomal protein L32
D RA0C_1480 LSU ribosomal protein l33p K02913 RP-L33; large subunit ribosomal protein L33
D RA0C_1269 LSU ribosomal protein K02914 RP-L34; large subunit ribosomal protein L34
D RA0C_0452 LSU ribosomal protein K02916 RP-L35; large subunit ribosomal protein L35
D RA0C_1134 LSU ribosomal protein l36p K02919 RP-L36; large subunit ribosomal protein L36
D RA0C_1529 LSU ribosomal protein l25p K02897 RP-L25; large subunit ribosomal protein L25
D RA0C_1059 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1831 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1319 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1321 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1829 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1061 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1060 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1320 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1830 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rai03009]
D RA0C_1241 rnase iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RA0C_0421 GTP-binding protein era K03595 era; GTPase
D RA0C_0285 GTP-binding protein obg/cgta K03979 obgE; GTPase [EC:3.6.5.-]
D RA0C_1395 dnak suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D RA0C_1577 nusa antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D RA0C_1708 nusb antitermination factor K03625 nusB; transcription antitermination protein NusB
D RA0C_1795 transcription antitermination protein nusg K02601 nusG; transcription termination/antitermination protein NusG
D RA0C_2091 fmu (sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RA0C_0087 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RA0C_0212 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RA0C_0597 16S rRNA m(7)g-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RA0C_1309 s-adenosyl-methyltransferase mraw K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RA0C_0206 protein tyrosine phosphatase/uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RA0C_1431 uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RA0C_2063 RNA methyltransferase, trmh family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RA0C_2007 tRNA/rRNA methyltransferase (spou) K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RA0C_0101 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RA0C_0518 rRNA (guanine-n(2)-)-methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RA0C_0675 23S rRNA m(2)agene503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RA0C_1335 23S rRNA m(5)ugene939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RA0C_0403 ribosomal large subunit pseudouridine synthase b K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RA0C_1781 ribosomal large subunit pseudouridine synthase d K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RA0C_1855 ribosomal large subunit pseudouridine synthase d K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RA0C_0870 16S rRNA processing protein rimm K02860 rimM; 16S rRNA processing protein RimM
D RA0C_0971 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RA0C_1877 (LSU ribosomal protein l11p)-lysine n-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RA0C_1850 ribonuclease, rne/rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D RA0C_1950 holliday junction resolvase yqgf K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RA0C_0524 dead/deah box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RA0C_0471 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RA0C_1624 ribosome-associated GTPase enga K03977 engA; GTPase
D RA0C_1560 GTP-binding protein hflx K03665 hflX; GTPase
D RA0C_1922 translation factor sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RA0C_0434 (p)ppgpp synthetase i, spot/rela K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RA0C_0769 ribosome-binding factor a K02834 rbfA; ribosome-binding factor A
D RA0C_1576 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D RA0C_1498 iojap-like protein K09710 ybeB; ribosome-associated protein
D RA0C_1371 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D RA0C_1786 ribosome hibernation protein yhbh K05808 hpf; ribosome hibernation promoting factor
D RA0C_0261 GTP-binding protein ychf K06942 ychF; ribosome-binding ATPase
D RA0C_1263 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rai03016]
D RA0C_0910 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RA0C_1394 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RA0C_1213 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA0C_0610 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RA0C_0654 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RA0C_1012 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA0C_0461 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RA0C_0400 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA0C_1844 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RA0C_1834 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RA0C_1655 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA0C_0449 ser-tRNA(thr) hydrolase/threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RA0C_1222 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RA0C_1714 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RA0C_0924 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RA0C_0563 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RA0C_1931 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RA0C_0592 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RA0C_0886 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA0C_1537 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RA0C_0809 D-tyrosyl-tRNA(tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RA0C_0813 histidine triad (hit) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RA0C_0195 tRNA pseudouridine synthase b K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RA0C_0703 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA0C_1922 translation factor sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RA0C_1417 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RA0C_0318 tRNA modification GTPase trme K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RA0C_1370 glucose inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RA0C_1607 ribonuclease p protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RA0C_1091 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D RA0C_1351 cmp/dcmp deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RA0C_0836 tRNA-u20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RA0C_1603 tRNA-i(6)a37 thiotransferase enzyme miab K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RA0C_1011 miab-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RA0C_0627 tRNA (guanine37-n(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RA0C_0484 tRNA/rRNA methyltransferase (spou) K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D RA0C_1267 methyltransferase type 12 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D RA0C_1661 tRNA/rRNA methyltransferase (spou) K03437 spoU; RNA methyltransferase, TrmH family
D RA0C_1561 tRNA (5-methylaminomethylgene-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RA0C_1399 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D RA0C_0676 s-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RA0C_1082 hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RA0C_0871 radical sam domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RA0C_1495 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RA0C_1224 tRNA(ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RA0C_1160 peptidase m22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RA0C_0211 o-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RA0C_0079 uncharacterized protein family upf0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RA0C_1608 uba/thif-type nad/fad binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RA0C_1438 rnase r K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RA0C_0860 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rai03012]
D RA0C_0427 translation initiation factor 1 (eifgene/sui1) K03113 EIF1; translation initiation factor 1
D RA0C_1578 bacterial translation initiation factor 2 (bifgene) K02519 infB; translation initiation factor IF-2
D RA0C_0450 bacterial translation initiation factor 3 (bifgene) K02520 infC; translation initiation factor IF-3
D RA0C_1088 translation elongation factor ts (ef-ts) K02357 tsf; elongation factor Ts
D RA0C_1792 translation elongation factor 1a (efgenea/ef-tu) K02358 tuf; elongation factor Tu
D RA0C_1672 translation elongation factor 2 (efgene/ef-g) K02355 fusA; elongation factor G
D RA0C_1285 bacterial peptide chain release factor 1 (brfgene) K02835 prfA; peptide chain release factor 1
D RA0C_0193 ribosome recycling factor K02838 frr; ribosome recycling factor
D RA0C_0485 protein-(glutamine-n5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RA0C_1095 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RA0C_1135 bacterial translation initiation factor 1 (bifgene) K02518 infA; translation initiation factor IF-1
D RA0C_0846 translation elongation factor p (ef-p) K02356 efp; elongation factor P
D RA0C_0616 bacterial peptide chain release factor 3 (brfgene) K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:rai03110]
D RA0C_1094 ATP-dependent chaperone clpb K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RA0C_1442 ATPase AAAgene domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RA0C_0814 sigma 54 interacting domain protein K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RA0C_0686 chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D RA0C_0589 chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA0C_0904 chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D RA0C_0905 grpe protein K03687 GRPE; molecular chaperone GrpE
D RA0C_0719 heat shock protein hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D RA0C_0590 chaperonin cpn10 K04078 groES; chaperonin GroES
D RA0C_1215 protease do K04771 degP; serine protease Do [EC:3.4.21.107]
D RA0C_1499 ATP-dependent metalloprotease ftsh K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D RA0C_0639 ATP synthase f0 subcomplex a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RA0C_1163 hydrogenase expression/synthesis hypa K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RA0C_1162 hydrogenase accessory protein hypb K04652 hypB; hydrogenase nickel incorporation protein HypB
D RA0C_0327 peptidase s8 and s53 subtilisin kexin sedolisin K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D RA0C_0264 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA0C_1252 ppic-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RA0C_1845 ppic-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RA0C_1585 thioredoxin K03671 TXN; thioredoxin
D RA0C_0702 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rai04131]
D RA0C_2003 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RA0C_0827 glyceraldehydegene-phosphate dehydrogenase, type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA0C_1240 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA0C_0929 major facilitator superfamily mfs_1 K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:rai03032]
D RA0C_0893 ribonuclease h K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RA0C_1849 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RA0C_0754 bacterial nucleoid protein hbs K03530 hupB; DNA-binding protein HU-beta
D RA0C_0204 chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D RA0C_0894 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RA0C_0062 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_0858 DNA polymerase iii, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA0C_0593 DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA0C_0340 DNA polymerase iii, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA0C_0294 DNA polymerase iii subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA0C_1593 DNA polymerase iii, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0776 exonuclease rnase t and DNA polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0740 DNA polymerase iii, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA0C_1015 ribonuclease h K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RA0C_0016 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_2086 Site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_0529 DNA gyrase subunit a K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA0C_0531 DNA gyrase subunit b K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA0C_0433 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RA0C_0431 DNA topoisomerase type iia subunit b region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RA0C_1484 DNA topoisomerase i K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rai03036]
D RA0C_1241 rnase iii K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RA0C_1849 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RA0C_0754 bacterial nucleoid protein hbs K03530 hupB; DNA-binding protein HU-beta
D RA0C_0204 chromosomal replication initiator protein dnaa K02313 dnaA; chromosomal replication initiator protein
D RA0C_1664 ferritin dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RA0C_1077 transcriptional regulator, asnc family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RA0C_1299 cell division protein ftsa K03590 ftsA; cell division protein FtsA
D RA0C_1268 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D RA0C_1307 peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RA0C_0338 cell division protein ftsk/spoiiie K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RA0C_1300 cell division protein ftsq K03589 ftsQ; cell division protein FtsQ
D RA0C_1303 cell cycle protein K03588 ftsW; cell division protein FtsW
D RA0C_0215 cell division protein ftsx K09811 ftsX; cell division transport system permease protein
D RA0C_1298 cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D RA0C_049429 hypothetical protein K09888 zapA; cell division protein ZapA
D RA0C_0115 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_1120 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RA0C_1376 efflux transporter, rnd family, mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1277 Membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1626 HSP70 class molecular chaperones involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RA0C_1627 rod shape-determining protein mrec K03570 mreC; rod shape-determining protein MreC
D RA0C_1744 gtra family protein K03571 mreD; rod shape-determining protein MreD
D RA0C_1630 cell cycle protein K05837 rodA; rod shape determining protein RodA
D RA0C_0333 para-like ATPase K03496 parA; chromosome partitioning protein
D RA0C_0332 parb-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RA0C_0433 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RA0C_0431 DNA topoisomerase type iia subunit b region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RA0C_1370 glucose inhibited division protein a K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RA0C_0597 16S rRNA m(7)g-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RA0C_1785 integrase family protein K03733 xerC; integrase/recombinase XerC
D RA0C_1700 tyrosine recombinase xerd K04763 xerD; integrase/recombinase XerD
D RA0C_0535 integrase family protein K04763 xerD; integrase/recombinase XerD
D RA0C_1516 integrase family protein K04763 xerD; integrase/recombinase XerD
D RA0C_1045 ATPase-like, para/mind K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RA0C_1389 filamentation induced by camp protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RA0C_0376 filamentation induced by camp protein fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RA0C_1312 ribosome biogenesis GTP-binding protein ysxc K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rai03400]
D RA0C_0649 methylateD-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RA0C_2006 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RA0C_1848 a/g-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RA0C_1087 endonuclease iii K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RA0C_0444 DNAgene-methyladenine glycosylase i K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D RA0C_0835 exodeoxyribonuclease iii xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RA0C_1114 exonuclease recj K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RA0C_1899 DNA ligase, naD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RA0C_0416 DNA polymerase i K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RA0C_0084 excinuclease ABC, a subunit K03701 uvrA; excinuclease ABC subunit A
D RA0C_0492 excinuclease ABC, a subunit K03701 uvrA; excinuclease ABC subunit A
D RA0C_1522 excinuclease ABC, b subunit K03702 uvrB; excinuclease ABC subunit B
D RA0C_1693 excinuclease ABC, c subunit K03703 uvrC; excinuclease ABC subunit C
D RA0C_0415 uvrd/rep helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RA0C_1805 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RA0C_1806 DNA-directed RNA polymerase subunit beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RA0C_1130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RA0C_1949 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RA0C_1491 DNA mismatch repair protein muts K03555 mutS; DNA mismatch repair protein MutS
D RA0C_1342 DNA mismatch repair protein mutl K03572 mutL; DNA mismatch repair protein MutL
D RA0C_0858 DNA polymerase iii, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RA0C_0593 DNA polymerase iii, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RA0C_0340 DNA polymerase iii, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RA0C_0294 DNA polymerase iii subunits gamma and tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RA0C_1593 DNA polymerase iii, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0776 exonuclease rnase t and DNA polymerase iii K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RA0C_0740 DNA polymerase iii, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_0016 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_2086 Site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_1019 reca protein K03553 recA; recombination protein RecA
D RA0C_1080 holliday junction DNA helicase subunit ruva K03550 ruvA; holliday junction DNA helicase RuvA
D RA0C_1697 holliday junction DNA helicase ruvb K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RA0C_0624 DNA replication and repair protein recf K03629 recF; DNA replication and repair protein RecF
D RA0C_0410 recombination protein recr K06187 recR; recombination protein RecR
D RA0C_1594 DNA replication and repair protein recn K03631 recN; DNA repair protein RecN (Recombination protein N)
D RA0C_1032 CRISPR-associated protein, cas1 family K15342 cas1; CRISP-associated protein Cas1
D RA0C_1592 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RA0C_0529 DNA gyrase subunit a K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RA0C_0531 DNA gyrase subunit b K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RA0C_1484 DNA topoisomerase i K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RA0C_1849 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RA0C_0754 bacterial nucleoid protein hbs K03530 hupB; DNA-binding protein HU-beta
D RA0C_0864 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_0308 ATP-dependent DNA helicase recq K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RA0C_0157 DNA-damage-inducible protein K14623 dinD; DNA-damage-inducible protein D
D RA0C_0999 regulatory protein recx K03565 recX; regulatory protein
D RA0C_1065 ribonucleoside-diphosphate reductase, alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RA0C_1066 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RA0C_1270 Exopolyphosphatase-related protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rai03029]
D RA0C_1578 bacterial translation initiation factor 2 (bifgene) K02519 infB; translation initiation factor IF-2
D RA0C_0450 bacterial translation initiation factor 3 (bifgene) K02520 infC; translation initiation factor IF-3
D RA0C_1088 translation elongation factor ts (ef-ts) K02357 tsf; elongation factor Ts
D RA0C_1792 translation elongation factor 1a (efgenea/ef-tu) K02358 tuf; elongation factor Tu
D RA0C_1672 translation elongation factor 2 (efgene/ef-g) K02355 fusA; elongation factor G
D RA0C_0421 GTP-binding protein era K03595 era; GTPase
D RA0C_0886 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RA0C_1213 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RA0C_0400 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RA0C_1655 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RA0C_1012 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RA0C_0532 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D RA0C_1327 outer membrane protein assembly complex, yaet protein K07277 SAM50; outer membrane protein insertion porin family
D RA0C_0686 chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D RA0C_0905 grpe protein K03687 GRPE; molecular chaperone GrpE
D RA0C_0589 chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA0C_0590 chaperonin cpn10 K04078 groES; chaperonin GroES
D RA0C_0904 chaperone protein dnaj K03686 dnaJ; molecular chaperone DnaJ
D RA0C_0703 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA0C_1036 ferredoxin K22071 FDX2; ferredoxin-2, mitochondrial
D RA0C_1686 nitrogen-fixing nifu domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D RA0C_1045 ATPase-like, para/mind K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RA0C_1016 protein translocase subunit yidc K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rai02000]
D RA0C_1755 ABC transporter related protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RA0C_1201 ABC transporter related protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D RA0C_1929 ABC transporter related protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D RA0C_1809 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D RA0C_1251 mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RA0C_0873 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RA0C_0874 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RA0C_1173 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D RA0C_1172 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RA0C_0607 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D RA0C_0660 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D RA0C_0335 permease yjgp/yjgq family protein K07091 lptF; lipopolysaccharide export system permease protein
D RA0C_1496 permease yjgp/yjgq family protein K11720 lptG; lipopolysaccharide export system permease protein
D RA0C_1993 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RA0C_1964 nitrous oxide reductase maturation transmembrane protein nosy K19341 nosY; Cu-processing system permease protein
D RA0C_1965 ABC transporter related protein K19340 nosF; Cu-processing system ATP-binding protein
D RA0C_0305 protein involved in gliding motility gldf K25151 gldF; gliding motility-associated transport system permease protein
D RA0C_1930 protein involved in gliding motility glda K25152 gldA; gliding motility-associated transport system ATP-binding protein
D RA0C_1876 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RA0C_0770 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D RA0C_0745 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RA0C_0215 cell division protein ftsx K09811 ftsX; cell division transport system permease protein
D RA0C_1268 ABC transporter related protein K09812 ftsE; cell division transport system ATP-binding protein
D RA0C_0902 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA0C_0405 transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RA0C_0903 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA0C_1459 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RA0C_1407 fes assembly ATPase sufc K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RA0C_0065 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump
D RA0C_1742 major facilitator superfamily mfs_1 K02429 fucP; MFS transporter, FHS family, L-fucose permease
D RA0C_0093 nucleoside transporter K11537 xapB; MFS transporter, NHS family, xanthosine permease
D RA0C_0641 major facilitator superfamily mfs_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RA0C_0929 major facilitator superfamily mfs_1 K06902 UMF1; MFS transporter, UMF1 family
D RA0C_0617 ion transport protein K10716 kch; voltage-gated potassium channel
D RA0C_2068 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D RA0C_2069 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D RA0C_0068 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D RA0C_0354 mscs mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D RA0C_0802 mscs mechanosensitive ion channel K16053 ybdG; miniconductance mechanosensitive channel
D RA0C_1631 ompa/motb domain protein K02557 motB; chemotaxis protein MotB
D RA0C_1191 outer membrane transport energization protein exbb K03561 exbB; biopolymer transport protein ExbB
D RA0C_1212 outer membrane transport energization protein exbb K03561 exbB; biopolymer transport protein ExbB
D RA0C_1192 outer membrane transport energization protein exbd K03559 exbD; biopolymer transport protein ExbD
D RA0C_0225 mg2 transporter protein cora family protein K03284 corA; magnesium transporter
D RA0C_0107 camphor resistance protein crcb K06199 crcB; fluoride exporter
D RA0C_0235 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D RA0C_0633 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RA0C_0417 hypothetical protein K16079 omp31; outer membrane immunogenic protein
D RA0C_1905 phosphate-selective porin o and p superfamily protein K07221 oprO_P; phosphate-selective porin OprO and OprP
D RA0C_0805 ompa/motb domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RA0C_0806 ompa/motb domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RA0C_1288 ompa/motb domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RA0C_1526 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D RA0C_1273 tonb-dependent receptor plug K19611 fepA; ferric enterobactin receptor
D RA0C_1050 tonb-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D RA0C_2053 tonb-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D RA0C_0098 tonb-dependent receptor K16092 btuB; vitamin B12 transporter
D RA0C_0227 tonb-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D RA0C_2031 tonb-dependent receptor plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D RA0C_0784 tonb-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RA0C_1636 tonb-dependent receptor plug K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RA0C_1272 tonb-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D RA0C_1808 tonb-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_1832 tonb-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_1902 tonb-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_1621 tonb-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_1171 tonb-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_0830 tonb-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_0650 Outer membrane receptor protein, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RA0C_0503 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_1378 rnd efflux system, outer membrane lipoprotein, nodt family K18139 oprM; outer membrane protein, multidrug efflux system
D RA0C_0997 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RA0C_1327 outer membrane protein assembly complex, yaet protein K07277 SAM50; outer membrane protein insertion porin family
D RA0C_1616 outer membrane assembly lipoprotein yfio K05807 bamD; outer membrane protein assembly factor BamD
D RA0C_1293 asma family protein K09800 tamB; translocation and assembly module TamB
D RA0C_0746 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D RA0C_0747 lrga family protein K06518 cidA; holin-like protein
D RA0C_0693 zinc/iron permease K16267 zipB; zinc and cadmium transporter
D RA0C_0502 heavy metal efflux pump, czca family K15726 czcA; heavy metal efflux system protein
D RA0C_0695 small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RA0C_0435 sodium/proton antiporter, nhaa family K03313 nhaA; Na+:H+ antiporter, NhaA family
D RA0C_0570 potassium/proton antiporter, cpa1 family K11105 cvrA; potassium/hydrogen antiporter
D RA0C_0097 potassium efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RA0C_0075 h(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D RA0C_0074 trka-n domain protein K03499 trkA; trk/ktr system potassium uptake protein
D RA0C_0685 cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D RA0C_0906 mn2+/fe2+ transporter, nramp family K03322 mntH; manganese transport protein
D RA0C_1911 potassium transporter K03549 kup; KUP system potassium uptake protein
D RA0C_0506 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D RA0C_2072 multiple antibiotic resistance (marc)-related protein K05595 marC; multiple antibiotic resistance protein
D RA0C_1303 cell cycle protein K03588 ftsW; cell division protein FtsW
D RA0C_1209 outer membrane transport energization protein tonb K03832 tonB; periplasmic protein TonB
D RA0C_0334 tonb family protein K03832 tonB; periplasmic protein TonB
D RA0C_0504 efflux transporter, rnd family, mfp subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D RA0C_1376 efflux transporter, rnd family, mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1277 Membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_0996 capsular exopolysaccharide family K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RA0C_1490 protein involved in gliding motility epsb K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RA0C_1360 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_1853 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_2030 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_1580 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_1079 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_2045 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_0228 ragb/susd domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D RA0C_2042 nicotinamide mononucleotide transporter pnuc K03811 pnuC; nicotinamide mononucleotide transporter
D RA0C_1563 feoa family protein K04758 feoA; ferrous iron transport protein A
D RA0C_1564 ferrous iron transport protein b K04759 feoB; ferrous iron transport protein B
D RA0C_1405 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0322 hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0580 Transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RA0C_0583 Transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:rai02044]
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
D RA0C_1701 cmp/dcmp deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D RA0C_1068 phosphoribosyltransferase K02242 comFC; competence protein ComFC
D RA0C_1619 protein translocase subunit seca K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RA0C_0571 protein translocase subunit secf, protein translocase subunit secd K12257 secDF; SecD/SecF fusion protein
D RA0C_1794 preprotein translocase, sece subunit K03073 secE; preprotein translocase subunit SecE
D RA0C_1136 protein translocase subunit secy/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D RA0C_0483 signal recognition particle subunit ffh/srp54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RA0C_1482 signal recognition particle-docking protein ftsy K03110 ftsY; fused signal recognition particle receptor
D RA0C_1710 protein translocase subunit yajc K03210 yajC; preprotein translocase subunit YajC
D RA0C_1016 protein translocase subunit yidc K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RA0C_1731 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
D RA0C_1732 twin-arginine translocation protein, tata/e family subunit K03116 tatA; sec-independent protein translocase protein TatA
C 02042 Bacterial toxins [BR:rai02042]
D RA0C_0633 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rai02022]
D RA0C_1946 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RA0C_1542 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D RA0C_1543 two component transcriptional regulator, lyttr family K02477 K02477; two-component system, LytTR family, response regulator
D RA0C_1958 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:rai02035]
D RA0C_1631 ompa/motb domain protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rai04812]
D RA0C_1626 HSP70 class molecular chaperones involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RA0C_1298 cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D RA0C_1299 cell division protein ftsa K03590 ftsA; cell division protein FtsA
D RA0C_0333 para-like ATPase K03496 parA; chromosome partitioning protein
D RA0C_0332 parb-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rai04147]
D RA0C_1124 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RA0C_0827 glyceraldehydegene-phosphate dehydrogenase, type i K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RA0C_1356 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RA0C_1240 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RA0C_0264 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RA0C_0314 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RA0C_0589 chaperonin groel K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RA0C_0686 chaperone protein dnak K04043 dnaK; molecular chaperone DnaK
D RA0C_1001 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RA0C_0966 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RA0C_2015 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RA0C_1754 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RA0C_1792 translation elongation factor 1a (efgenea/ef-tu) K02358 tuf; elongation factor Tu
D RA0C_0813 histidine triad (hit) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RA0C_0879 amp-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0615 polyprenyl synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RA0C_0930 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RA0C_0284 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RA0C_1470 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RA0C_0899 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D RA0C_0852 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RA0C_1546 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RA0C_0867 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RA0C_0897 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D RA0C_2029 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0772 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0356 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_1865 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RA0C_0490 imp cyclohydrolase, phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RA0C_0901 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0698 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RA0C_0091 electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RA0C_0474 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RA0C_1233 serum amyloid a protein K17310 SAA; serum amyloid A protein
C 02048 Prokaryotic defense system [BR:rai02048]
D RA0C_1032 CRISPR-associated protein, cas1 family K15342 cas1; CRISP-associated protein Cas1
D RA0C_1031 CRISPR-associated protein, cas2 family K09951 cas2; CRISPR-associated protein Cas2
D RA0C_1034 putative BCR K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D RA0C_2027 type i site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RA0C_2026 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RA0C_2025 n-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RA0C_0017 type ii site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D RA0C_1747 type ii site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D RA0C_0016 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_2086 Site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D RA0C_2087 site-specific DNA-methyltransferase (adenine-specific) K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D RA0C_0018 DNA methylase n-4/n-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D RA0C_0051 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D RA0C_0692 restriction endonuclease K07448 mrr; restriction system protein
D RA0C_0034 addiction module toxin, txe/yoeb family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D RA0C_0033 prevent-host-death family protein K19159 yefM; antitoxin YefM
D RA0C_0003 putative transcriptional regulator with C-terminal CBS domains/Predicted transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RA0C_0123 helix-turn-helix domain protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D RA0C_1298 cell division protein ftsz K03531 ftsZ; cell division protein FtsZ
D RA0C_1626 HSP70 class molecular chaperones involved in cell morphogenesis K03569 mreB; rod shape-determining protein MreB and related proteins
D RA0C_0433 DNA topoisomerase (ATP-hydrolyzing) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RA0C_0431 DNA topoisomerase type iia subunit b region 2 domain protein K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RA0C_0703 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RA0C_0780 sulfurtransferase dndc K19170 dndC; DNA sulfur modification protein DndC
D RA0C_0781 DNA sulfur modification protein dndd K19171 dndD; DNA sulfur modification protein DndD
D RA0C_0782 hypothetical protein K19172 dndE; DNA sulfur modification protein DndE
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rai04090]
D RA0C_0966 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D RA0C_2015 peptidase s9b dipeptidylpeptidase iv domain protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:rai01504]
D RA0C_0641 major facilitator superfamily mfs_1 K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RA0C_0696 peptidase m56 blar1 K02172 blaR1; bla regulator protein blaR1
D RA0C_0729 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_0697 transcriptional repressor, copy family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D RA0C_1376 efflux transporter, rnd family, mfp subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1277 Membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RA0C_1378 rnd efflux system, outer membrane lipoprotein, nodt family K18139 oprM; outer membrane protein, multidrug efflux system
D RA0C_1278 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rai00537]
D RA0C_2029 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D RA0C_0772 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rai03100]
D RA0C_1828 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA0C_0466 trnA; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RA0C_0373 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_0606 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_0790 trnR; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RA0C_1517 trnN; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RA0C_0700 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RA0C_1069 trnG; tRNA-Gly K14222 tRNA-Cys; tRNA Cys
D RA0C_1860 trnQ; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RA0C_1118 trnQ; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA0C_1119 trnQ; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RA0C_1789 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA0C_1569 trnG; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RA0C_1204 trnH; tRNA-His K14226 tRNA-His; tRNA His
D RA0C_1827 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RA0C_1570 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_2016 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_1568 trnL; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RA0C_0717 trnK; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RA0C_0768 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0644 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0819 trnM; tRNA-Met K14230 tRNA-Met; tRNA Met
D RA0C_0855 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RA0C_0791 trnP; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RA0C_0670 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA0C_0108 trnV; tRNA-Val K14233 tRNA-Ser; tRNA Ser
D RA0C_0792 trnS; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RA0C_1787 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA0C_1790 trnT; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RA0C_1793 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RA0C_1788 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RA0C_1572 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D RA0C_1573 trnV; tRNA-Val K14237 tRNA-Val; tRNA Val
D RA0C_1321 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1829 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1061 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RA0C_1060 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1320 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1830 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RA0C_1059 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1831 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RA0C_1319 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RA0C_0288 fad linked oxidase domain protein K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D RA0C_1314 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RA0C_1346 methionine-r-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RA0C_0938 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RA0C_0462 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RA0C_1086 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RA0C_0945 thiol peroxidase (atypical 2-cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RA0C_1959 pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RA0C_1698 ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D RA0C_0562 arsenate reductase and related protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RA0C_0546 protein-l-isoaspartate(D-aspartate) o-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RA0C_1660 spermine/spermidine n-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D RA0C_0585 Acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D RA0C_1691 apolipoprotein n-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RA0C_0341 glutamine cyclotrons ferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D RA0C_1565 leucyl/phenylalanyl-tRNA/protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RA0C_1737 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D RA0C_1041 homospermidine synthase (spermidine-specific) K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D RA0C_0069 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RA0C_0598 glyoxalase/bleomycin resistance protein/dioxygenase K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D RA0C_1979 Membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RA0C_0203 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RA0C_1324 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RA0C_1600 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RA0C_1609 tatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RA0C_0286 hydrolase, tatd family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RA0C_0800 alpha/beta hydrolase fold protein K01175 ybfF; esterase [EC:3.1.-.-]
D RA0C_1951 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RA0C_1205 lmbe family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D RA0C_1122 endoribonuclease l-psp K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RA0C_2065 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RA0C_2008 cytoplasmic peptidoglycan synthetase domain protein K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RA0C_1652 hypothetical protein K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D RA0C_1582 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D RA0C_1217 4fe-4S ferredoxin iron-sulfur binding domain-containing protein K05337 fer; ferredoxin
D RA0C_0090 electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RA0C_0881 glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D RA0C_0067 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RA0C_0752 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D RA0C_0425 metallophosphoesterase(MPPE) K22390 ACP7; acid phosphatase type 7
D RA0C_0885 phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D RA0C_1639 hypothetical protein K26958 brxA_B; bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RA0C_0516 barstar (barnase inhibitor) K03623 yhcO; ribonuclease inhibitor
D RA0C_0672 colD-shock DNA-binding protein family K03704 cspA; cold shock protein
D RA0C_0129 anta/antb antirepressor domain protein K07741 antB; anti-repressor protein
D RA0C_0155 phage antirepressor protein K07741 antB; anti-repressor protein
D RA0C_0379 anta/antb antirepressor domain protein K07741 antB; anti-repressor protein
D RA0C_0821 tex-like protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D RA0C_0591 hypothetical protein K03668 hslJ; heat shock protein HslJ
D RA0C_0632 ATP-dependent clp protease adaptor protein clps K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RA0C_0833 trigger factor K03545 tig; trigger factor
D RA0C_1167 uree urease accessory domain-containing protein K03187 ureE; urease accessory protein
D RA0C_1166 urease accessory protein uref K03188 ureF; urease accessory protein
D RA0C_1165 urease accessory protein ureg K03189 ureG; urease accessory protein
D RA0C_1164 urease accessory protein ured K03190 ureD; urease accessory protein
D RA0C_1289 ssra-binding protein K03664 smpB; SsrA-binding protein
D RA0C_0711 air synthase related protein domain protein K04655 hypE; hydrogenase expression/formation protein HypE
D RA0C_1532 mg chelatase, subunit chli K07391 comM; magnesium chelatase family protein
D RA0C_1286 osmc family protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D RA0C_0744 DNA repair protein radc K03630 radC; DNA repair protein RadC
D RA0C_1662 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D RA0C_1540 uncharacterized protein family upf0102 K07460 yraN; putative endonuclease
D RA0C_1073 DNA protecting protein dpra K04096 smf; DNA processing protein
D RA0C_0147 phage terminase, large subunit, pbsx family K06909 xtmB; phage terminase large subunit
D RA0C_1767 3'-5' exonuclease, polb K07501 K07501; 3'-5' exonuclease
D RA0C_1890 is1 transposase K07480 insB; insertion element IS1 protein InsB
D RA0C_0345 hypothetical protein K07488 K07488; transposase
D RA0C_0406 hypothetical protein K07488 K07488; transposase
C 99979 Viral proteins
C 99998 Others
D RA0C_1896 phage shock protein a, pspa K03969 pspA; phage shock protein A
D RA0C_1880 rhodanese domain protein K03972 pspE; phage shock protein E
D RA0C_1586 rhodanese domain protein K03972 pspE; phage shock protein E
D RA0C_1588 rhodanese domain protein K03972 pspE; phage shock protein E
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RA0C_2041 amino acid/polyamine/organocation transporter, apc superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RA0C_0200 amino acid/polyamine/organocation transporter, apc superfamily K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RA0C_1276 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RA0C_1377 transporter, hydrophobe/amphiphile effluxgene (hae1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D RA0C_1903 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RA0C_2033 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RA0C_0732 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D RA0C_1976 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D RA0C_1730 peptidase m23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D RA0C_0467 GTP-binding protein typa K06207 typA; GTP-binding protein
D RA0C_0420 phoh family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D RA0C_1325 outer membrane chaperone skp (omph) K06142 hlpA; outer membrane protein
D RA0C_1326 outer membrane chaperone skp (omph) K06142 hlpA; outer membrane protein
D RA0C_1049 glycoside hydrolase family 25 K07273 acm; lysozyme
C 99994 Others
D RA0C_0549 integral membrane protein terc K05794 terC; tellurite resistance protein TerC
D RA0C_1966 nitrous oxide reductase maturation protein nosd K07218 nosD; nitrous oxidase accessory protein
D RA0C_1967 lipoprotein, putative K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RA0C_1313 gcn5-related n-acetyltransferase K02348 elaA; ElaA protein
D RA0C_1048 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RA0C_1074 hypothetical protein K06886 glbN; hemoglobin
D RA0C_1372 patatin K07001 K07001; NTE family protein
D RA0C_1536 haD-superfamily hydrolase, subfamily ia, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D RA0C_1401 iron-regulated ABC transporter membrane component sufb K09014 sufB; Fe-S cluster assembly protein SufB
D RA0C_1408 fes assembly protein sufd K09015 sufD; Fe-S cluster assembly protein SufD
D RA0C_0100 ribonuclease bn K07058 K07058; membrane protein
D RA0C_1295 ribonuclease bn K07058 K07058; membrane protein
D RA0C_1444 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE
D RA0C_0579 hypothetical protein K11477 glcG; glc operon protein GlcG
D RA0C_0582 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol K11477 glcG; glc operon protein GlcG
D RA0C_0321 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol K11477 glcG; glc operon protein GlcG
D RA0C_0969 lema family protein K03744 lemA; LemA protein
D RA0C_1397 hypothetical protein K03748 sanA; SanA protein
D RA0C_0063 snare associated golgi protein-related protein K03975 dedA; membrane-associated protein
D RA0C_0258 hypothetical protein K08972 K08972; putative membrane protein
D RA0C_1998 hypothetical protein K08987 K08987; putative membrane protein
D RA0C_0723 alkylphosphonate utilization operon protein phna K06193 phnA; protein PhnA
D RA0C_0578 hypothetical protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D RA0C_0242 ankyrin K06867 K06867; uncharacterized protein
D RA0C_1982 ankyrin K06867 K06867; uncharacterized protein
D RA0C_0967 hypothetical protein K06872 K06872; uncharacterized protein
D RA0C_1203 pur-alpha/beta/gamma DNA/RNA-binding protein K06884 K06884; uncharacterized protein
D RA0C_0850 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D RA0C_0360 hypothetical protein K06890 K06890; uncharacterized protein
D RA0C_1658 hypothetical protein K06940 K06940; uncharacterized protein
D RA0C_0963 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein
D RA0C_1638 hypothetical protein K06975 K06975; uncharacterized protein
D RA0C_0020 esterase K07017 K07017; uncharacterized protein
D RA0C_1473 nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase K07054 K07054; uncharacterized protein
D RA0C_1590 hypothetical protein K07090 K07090; uncharacterized protein
D RA0C_0505 hypothetical protein K07090 K07090; uncharacterized protein
D RA0C_0240 metallophosphoesterase(MPPE) K07098 K07098; uncharacterized protein
D RA0C_0022 TPR repeat protein K07126 K07126; uncharacterized protein
D RA0C_0619 hypothetical protein K07164 K07164; uncharacterized protein
D RA0C_0092 hypothetical protein K08999 K08999; uncharacterized protein
D RA0C_0364 hypothetical protein K09158 K09158; uncharacterized protein
D RA0C_0709 hypothetical protein K09791 K09791; uncharacterized protein
D RA0C_1770 heavy-metal-associated domain and membrane-bounded cytochrome biogenesis cycz-like domain, possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D RA0C_0803 hypothetical protein K09793 K09793; uncharacterized protein
D RA0C_0468 hypothetical protein K09794 K09794; uncharacterized protein
D RA0C_0892 hypothetical protein K09807 K09807; uncharacterized protein
D RA0C_0387 hypothetical protein K00243 K00243; uncharacterized protein
D RA0C_0486 hypothetical protein K09861 K09861; uncharacterized protein
D RA0C_1544 hypothetical protein K09940 K09940; uncharacterized protein
D RA0C_1381 hypothetical protein K09954 K09954; uncharacterized protein
D RA0C_0733 phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 14, 2024