+D GENES KO
#
KEGG Orthology (KO) - Candidatus Rhabdochlamydia oedothoracis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rhaw00010]
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RHABOEDO_001132 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RHABOEDO_000958 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RHABOEDO_001163 Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RHABOEDO_001049 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RHABOEDO_000444 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RHABOEDO_001786 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RHABOEDO_001766 bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RHABOEDO_000871 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RHABOEDO_000748 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RHABOEDO_000749 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RHABOEDO_000750 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001068 Alpha-D-glucose 1-phosphate phosphatase YihX K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_001637 Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:rhaw00020]
D RHABOEDO_001279 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RHABOEDO_000528 Aconitate/2-methylaconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RHABOEDO_001710 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RHABOEDO_000939 Multifunctional 2-oxoglutarate metabolism enzyme K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RHABOEDO_000938 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_001715 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001361 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RHABOEDO_001362 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RHABOEDO_000262 Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RHABOEDO_000263 Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RHABOEDO_000261 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RHABOEDO_000848 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RHABOEDO_001280 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RHABOEDO_001637 Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RHABOEDO_000748 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RHABOEDO_000749 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RHABOEDO_000750 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rhaw00030]
D RHABOEDO_001132 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RHABOEDO_001108 Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RHABOEDO_001106 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RHABOEDO_001483 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RHABOEDO_001318 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RHABOEDO_001550 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RHABOEDO_000824 Transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RHABOEDO_000736 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_000626 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RHABOEDO_001163 Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RHABOEDO_000958 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:rhaw00040]
D RHABOEDO_001088 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RHABOEDO_001318 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RHABOEDO_000295 Bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase Bcs1 K21681 bcs1; ribitol-5-phosphate 2-dehydrogenase (NADP+) / D-ribitol-5-phosphate cytidylyltransferase [EC:1.1.1.405 2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:rhaw00051]
D RHABOEDO_000015 Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RHABOEDO_000018 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RHABOEDO_000279 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RHABOEDO_000958 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D RHABOEDO_001163 Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RHABOEDO_001049 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:rhaw00052]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism [PATH:rhaw00053]
D RHABOEDO_001088 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RHABOEDO_000222 UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:rhaw00500]
D RHABOEDO_000046 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RHABOEDO_000618 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D RHABOEDO_000677 alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RHABOEDO_000346 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RHABOEDO_001339 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RHABOEDO_000996 Glycogen operon protein GlgX-like protein K01214 ISA; isoamylase [EC:3.2.1.68]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RHABOEDO_001132 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rhaw00520]
D RHABOEDO_000950 Glutamine--fructose-6-phosphate aminotransferase[isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RHABOEDO_000138 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RHABOEDO_000226 putative uridylyltransferase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]
D RHABOEDO_000357 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RHABOEDO_000886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RHABOEDO_000220 UDP-glucose 4-epimerase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_001088 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RHABOEDO_000222 UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RHABOEDO_001132 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RHABOEDO_000015 Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RHABOEDO_000018 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RHABOEDO_000279 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RHABOEDO_000046 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rhaw00620]
D RHABOEDO_000748 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RHABOEDO_000749 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RHABOEDO_000750 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000871 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RHABOEDO_000742 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_001314 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RHABOEDO_001313 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RHABOEDO_001532 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_000693 diketo-D-gluconic acid reductase A K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D RHABOEDO_000194 Uncharacterized protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RHABOEDO_001147 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RHABOEDO_001280 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RHABOEDO_000848 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RHABOEDO_001637 Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rhaw00630]
D RHABOEDO_001280 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RHABOEDO_001279 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RHABOEDO_000528 Aconitate/2-methylaconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RHABOEDO_000482 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001508 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:rhaw00640]
D RHABOEDO_001453 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000742 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_001314 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RHABOEDO_001313 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RHABOEDO_001532 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_001362 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RHABOEDO_001361 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RHABOEDO_000693 diketo-D-gluconic acid reductase A K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism
D RHABOEDO_000262 Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RHABOEDO_000263 Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RHABOEDO_000261 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
C 00660 C5-Branched dibasic acid metabolism
D RHABOEDO_001362 Succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RHABOEDO_001361 Succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism
D RHABOEDO_001049 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rhaw00190]
D RHABOEDO_001428 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RHABOEDO_000262 Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RHABOEDO_000263 Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RHABOEDO_000261 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RHABOEDO_001119 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RHABOEDO_001118 Cytochrome bo(3) ubiquinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RHABOEDO_001117 Cytochrome bo(3) ubiquinol oxidase subunit 3 K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RHABOEDO_001116 Cytochrome bo(3) ubiquinol oxidase subunit 1 K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RHABOEDO_001115 Cytochrome bo(3) ubiquinol oxidase subunit 2 K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RHABOEDO_000452 Cytochrome bd-II ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RHABOEDO_000877 Cytochrome bd terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RHABOEDO_000449 Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RHABOEDO_000876 Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RHABOEDO_000835 V-type sodium ATPase catalytic subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RHABOEDO_000836 V-type sodium ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RHABOEDO_000837 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RHABOEDO_000833 V-type proton ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D RHABOEDO_000838 V-type ATPase 116kDa subunit family K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RHABOEDO_000839 V-type sodium ATPase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rhaw00680]
D RHABOEDO_000482 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RHABOEDO_001280 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RHABOEDO_001163 Fructose-bisphosphate aldolase class 1 K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D RHABOEDO_001766 bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:rhaw00910]
D RHABOEDO_001457 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RHABOEDO_001105 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rhaw00920]
D RHABOEDO_000360 Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rhaw00061]
D RHABOEDO_000742 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_001314 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RHABOEDO_001313 2-oxoglutarate carboxylase small subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RHABOEDO_001532 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RHABOEDO_000768 Acyl carrier protein K02078 acpP; acyl carrier protein
D RHABOEDO_000766 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RHABOEDO_000765 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RHABOEDO_001390 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RHABOEDO_000767 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RHABOEDO_000412 3-hydroxyacyl-[acyl-carrier-protein] dehydrataseFabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RHABOEDO_000922 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rhaw00071]
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rhaw00561]
D RHABOEDO_000583 Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RHABOEDO_000585 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RHABOEDO_000383 Bifunctional protein Aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:rhaw00564]
D RHABOEDO_000225 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RHABOEDO_000583 Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RHABOEDO_000383 Bifunctional protein Aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RHABOEDO_000381 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RHABOEDO_001345 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RHABOEDO_000040 Phosphatidylserine decarboxylase proenzyme 2 K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RHABOEDO_000617 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RHABOEDO_001792 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:rhaw00592]
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rhaw00230]
D RHABOEDO_000864 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_000626 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RHABOEDO_000070 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RHABOEDO_001308 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RHABOEDO_000303 Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RHABOEDO_001312 Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RHABOEDO_001143 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RHABOEDO_001627 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RHABOEDO_000159 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RHABOEDO_000710 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RHABOEDO_001346 Ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RHABOEDO_001347 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RHABOEDO_000379 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RHABOEDO_001666 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D RHABOEDO_001291 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RHABOEDO_001244 MazG nucleotide pyrophosphohydrolase domain K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:rhaw00240]
D RHABOEDO_000352 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RHABOEDO_000340 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RHABOEDO_000285 Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RHABOEDO_001627 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RHABOEDO_001244 MazG nucleotide pyrophosphohydrolase domain K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RHABOEDO_001110 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RHABOEDO_000382 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RHABOEDO_001308 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RHABOEDO_001239 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RHABOEDO_001346 Ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RHABOEDO_001347 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RHABOEDO_001029 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RHABOEDO_001531 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RHABOEDO_000896 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rhaw00250]
D RHABOEDO_000211 Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RHABOEDO_000379 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RHABOEDO_000070 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RHABOEDO_000352 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RHABOEDO_001457 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D RHABOEDO_000950 Glutamine--fructose-6-phosphate aminotransferase[isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:rhaw00260]
D RHABOEDO_001320 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RHABOEDO_001718 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RHABOEDO_000482 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RHABOEDO_001766 bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001508 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RHABOEDO_001345 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
C 00270 Cysteine and methionine metabolism [PATH:rhaw00270]
D RHABOEDO_001534 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RHABOEDO_000303 Polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RHABOEDO_001320 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RHABOEDO_001718 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RHABOEDO_001686 D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RHABOEDO_001280 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:rhaw00280]
D RHABOEDO_001686 D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RHABOEDO_001781 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D RHABOEDO_001453 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rhaw00290]
D RHABOEDO_001686 D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RHABOEDO_001781 Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:rhaw00300]
D RHABOEDO_001320 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RHABOEDO_001718 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RHABOEDO_000069 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RHABOEDO_001620 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RHABOEDO_000484 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RHABOEDO_001539 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RHABOEDO_001484 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RHABOEDO_001409 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rhaw00310]
D RHABOEDO_000938 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_001715 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D RHABOEDO_001457 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00330 Arginine and proline metabolism
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00360 Phenylalanine metabolism
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00380 Tryptophan metabolism
D RHABOEDO_000938 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_001715 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rhaw00400]
D RHABOEDO_000851 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RHABOEDO_000985 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RHABOEDO_000986 Shikimate dehydrogenase (NADP(+)) K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
D RHABOEDO_000983 Shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RHABOEDO_000984 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RHABOEDO_000982 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism
D RHABOEDO_001457 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D RHABOEDO_000660 Ribonuclease BN K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rhaw00450]
D RHABOEDO_000326 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RHABOEDO_000311 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RHABOEDO_000774 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RHABOEDO_000712 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D RHABOEDO_000482 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rhaw00470]
D RHABOEDO_000358 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001398 UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_000237 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RHABOEDO_001402 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RHABOEDO_000484 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:rhaw00480]
D RHABOEDO_001252 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RHABOEDO_001710 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RHABOEDO_001483 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D RHABOEDO_001108 Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rhaw00540]
D RHABOEDO_000413 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RHABOEDO_000411 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RHABOEDO_000761 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RHABOEDO_000588 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RHABOEDO_001716 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RHABOEDO_001709 Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RHABOEDO_001623 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RHABOEDO_000318 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RHABOEDO_001139 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RHABOEDO_000874 Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RHABOEDO_001717 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RHABOEDO_000633 Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RHABOEDO_000632 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RHABOEDO_001249 Lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RHABOEDO_000228 ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RHABOEDO_000880 D-inositol-3-phosphate glycosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rhaw00541]
D RHABOEDO_001088 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RHABOEDO_000222 UDP-N-acetylglucosamine 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RHABOEDO_001311 Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RHABOEDO_000317 dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RHABOEDO_000315 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RHABOEDO_000316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RHABOEDO_000015 Alginate biosynthesis protein AlgA K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RHABOEDO_000018 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RHABOEDO_000279 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RHABOEDO_000138 Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rhaw00550]
D RHABOEDO_000357 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RHABOEDO_000886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RHABOEDO_001398 UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001402 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RHABOEDO_001484 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RHABOEDO_000358 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001409 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RHABOEDO_000380 Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RHABOEDO_001434 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RHABOEDO_001408 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RHABOEDO_001399 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RHABOEDO_001485 putative peptidoglycan D,D-transpeptidase PenA K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RHABOEDO_000404 D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RHABOEDO_000723 D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rhaw00552]
D RHABOEDO_001434 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rhaw00730]
D RHABOEDO_001235 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001765 Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001034 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RHABOEDO_000201 Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RHABOEDO_001291 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
D RHABOEDO_000864 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:rhaw00760]
D RHABOEDO_001308 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RHABOEDO_001392 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RHABOEDO_001244 MazG nucleotide pyrophosphohydrolase domain K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RHABOEDO_001671 Glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RHABOEDO_001033 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RHABOEDO_000347 Soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D RHABOEDO_000649 putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:rhaw00770]
D RHABOEDO_001244 MazG nucleotide pyrophosphohydrolase domain K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RHABOEDO_001796 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RHABOEDO_000776 Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RHABOEDO_001686 D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:rhaw00780]
D RHABOEDO_001390 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RHABOEDO_000767 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RHABOEDO_000412 3-hydroxyacyl-[acyl-carrier-protein] dehydrataseFabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RHABOEDO_000922 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RHABOEDO_001546 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RHABOEDO_001761 Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rhaw00785]
D RHABOEDO_000044 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RHABOEDO_001514 Octanoyltransferase LipM K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RHABOEDO_001807 lipoyltransferase and lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000748 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RHABOEDO_000749 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RHABOEDO_000750 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RHABOEDO_000939 Multifunctional 2-oxoglutarate metabolism enzyme K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RHABOEDO_000938 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_001715 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RHABOEDO_001453 1-deoxy-D-xylulose-5-phosphate synthase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D RHABOEDO_001508 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rhaw00790]
D RHABOEDO_000888 Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:rhaw00670]
D RHABOEDO_001069 Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RHABOEDO_000482 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RHABOEDO_000414 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RHABOEDO_000147 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rhaw00860]
D RHABOEDO_000361 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RHABOEDO_001610 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RHABOEDO_000915 Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RHABOEDO_000250 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RHABOEDO_001536 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RHABOEDO_001549 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RHABOEDO_001548 Oxygen-dependent coproporphyrinogen-III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RHABOEDO_001547 Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D RHABOEDO_000344 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RHABOEDO_001119 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rhaw00130]
D RHABOEDO_000137 Ubiquinone biosynthesis O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RHABOEDO_001017 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RHABOEDO_001016 Isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D RHABOEDO_001015 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D RHABOEDO_001004 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D RHABOEDO_001003 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D RHABOEDO_001006 dihydroxy-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D RHABOEDO_001002 dihydroxy-naphthoyl-CoA hydrolase K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RHABOEDO_001005 dihydroxy-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rhaw00900]
D RHABOEDO_001034 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RHABOEDO_001464 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RHABOEDO_000558 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RHABOEDO_000631 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RHABOEDO_000359 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RHABOEDO_001701 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RHABOEDO_001178 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RHABOEDO_000139 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RHABOEDO_001087 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RHABOEDO_000380 Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:rhaw00907]
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RHABOEDO_001550 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rhaw00523]
D RHABOEDO_001311 Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RHABOEDO_000317 dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RHABOEDO_000315 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RHABOEDO_000316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RHABOEDO_001016 Isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D RHABOEDO_000317 dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rhaw00261]
D RHABOEDO_001320 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RHABOEDO_001718 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RHABOEDO_000069 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RHABOEDO_001620 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rhaw00521]
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RHABOEDO_001417 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RHABOEDO_001311 Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RHABOEDO_000317 dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RHABOEDO_000315 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RHABOEDO_000316 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RHABOEDO_000143 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rhaw00525]
D RHABOEDO_001311 Glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RHABOEDO_000317 dTDP-glucose 4,6-dehydratase 2 K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D RHABOEDO_000766 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RHABOEDO_000767 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RHABOEDO_000922 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RHABOEDO_000768 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rhaw00999]
D RHABOEDO_001534 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RHABOEDO_000986 Shikimate dehydrogenase (NADP(+)) K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rhaw00362]
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D RHABOEDO_001590 hypothetical protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rhaw03020]
D RHABOEDO_000815 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RHABOEDO_000816 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RHABOEDO_000442 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rhaw03010]
D RHABOEDO_001323 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RHABOEDO_000283 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RHABOEDO_000427 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RHABOEDO_000508 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RHABOEDO_000437 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RHABOEDO_000629 Ribosomal protein S18 K02990 RP-S6; small subunit ribosomal protein S6
D RHABOEDO_001752 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RHABOEDO_000434 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RHABOEDO_000682 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RHABOEDO_001754 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RHABOEDO_000441 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RHABOEDO_001751 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RHABOEDO_000440 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RHABOEDO_000602 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RHABOEDO_000695 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RHABOEDO_000705 Ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RHABOEDO_000430 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RHABOEDO_000425 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RHABOEDO_000101 Ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RHABOEDO_000465 Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RHABOEDO_000812 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RHABOEDO_000424 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RHABOEDO_000421 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RHABOEDO_000422 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RHABOEDO_000433 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RHABOEDO_000435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RHABOEDO_000814 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RHABOEDO_000630 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RHABOEDO_000813 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RHABOEDO_000811 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RHABOEDO_000681 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RHABOEDO_000431 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RHABOEDO_000438 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RHABOEDO_000428 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RHABOEDO_000443 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RHABOEDO_000436 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RHABOEDO_000707 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RHABOEDO_000894 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RHABOEDO_001744 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RHABOEDO_000426 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RHABOEDO_000423 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RHABOEDO_000432 Ribosomal proteins 50S L24/mitochondrial 39S L24 K02895 RP-L24; large subunit ribosomal protein L24
D RHABOEDO_000627 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D RHABOEDO_001745 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RHABOEDO_000648 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RHABOEDO_000429 Ribosomal L29 protein K02904 RP-L29; large subunit ribosomal protein L29
D RHABOEDO_000701 Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RHABOEDO_000586 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RHABOEDO_001091 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RHABOEDO_000600 Ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RHABOEDO_000893 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RHABOEDO_000601 Ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rhaw00970]
D RHABOEDO_001817 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RHABOEDO_001845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RHABOEDO_001854 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RHABOEDO_001828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RHABOEDO_001850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RHABOEDO_001829 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RHABOEDO_001820 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RHABOEDO_001855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001856 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001819 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001844 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RHABOEDO_001821 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RHABOEDO_001838 tRNA-Met K14230 tRNA-Met; tRNA Met
D RHABOEDO_001861 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RHABOEDO_001816 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RHABOEDO_001832 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RHABOEDO_001834 tRNA-Val K14237 tRNA-Val; tRNA Val
D RHABOEDO_000361 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RHABOEDO_001204 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001205 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferasesubunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001203 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001663 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RHABOEDO_000388 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RHABOEDO_001608 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RHABOEDO_000190 Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_000613 Glycyl-tRNA synthetase beta subunit K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_000073 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_000891 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_001111 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RHABOEDO_001377 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RHABOEDO_000712 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RHABOEDO_000414 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RHABOEDO_000861 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RHABOEDO_001138 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RHABOEDO_001266 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RHABOEDO_001370 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RHABOEDO_001780 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RHABOEDO_001513 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RHABOEDO_000389 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RHABOEDO_000895 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RHABOEDO_000522 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RHABOEDO_000739 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RHABOEDO_000866 Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rhaw03060]
D RHABOEDO_000439 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RHABOEDO_000809 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RHABOEDO_001050 Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RHABOEDO_000366 Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D RHABOEDO_001683 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RHABOEDO_000999 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RHABOEDO_000041 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RHABOEDO_000704 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RHABOEDO_001363 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RHABOEDO_001263 Peptidase S24-like K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RHABOEDO_001727 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rhaw04122]
D RHABOEDO_001235 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001765 Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001519 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rhaw03018]
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RHABOEDO_000694 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RHABOEDO_001067 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RHABOEDO_001797 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RHABOEDO_001460 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RHABOEDO_000187 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000729 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001411 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000270 CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RHABOEDO_000590 Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rhaw03030]
D RHABOEDO_000746 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000884 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001785 3'-5' exonuclease DinG K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000398 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RHABOEDO_001420 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RHABOEDO_001030 DNA polymerase III K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RHABOEDO_000925 DNA polymerase III K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RHABOEDO_001135 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RHABOEDO_001805 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RHABOEDO_000611 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_000708 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RHABOEDO_001185 Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rhaw03410]
D RHABOEDO_000039 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RHABOEDO_000065 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RHABOEDO_000118 Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RHABOEDO_001066 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RHABOEDO_001174 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RHABOEDO_001607 Endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000365 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rhaw03420]
D RHABOEDO_001664 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RHABOEDO_000870 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RHABOEDO_000253 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D RHABOEDO_000608 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D RHABOEDO_000183 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_000598 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rhaw03430]
D RHABOEDO_000609 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RHABOEDO_000001 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RHABOEDO_000183 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_000598 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_001036 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RHABOEDO_001035 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RHABOEDO_000365 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_000398 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RHABOEDO_001135 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RHABOEDO_001420 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RHABOEDO_000925 DNA polymerase III K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RHABOEDO_001030 DNA polymerase III K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RHABOEDO_000746 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000884 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001785 3'-5' exonuclease DinG K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rhaw03440]
D RHABOEDO_000365 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_001134 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RHABOEDO_000543 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RHABOEDO_000764 Recombination protein RecR K06187 recR; recombination protein RecR
D RHABOEDO_000142 Protein RecA K03553 recA; recombination protein RecA
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000030 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RHABOEDO_001240 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RHABOEDO_000029 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RHABOEDO_000067 Putative ATP-dependent DNA helicase recG C-terminal K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RHABOEDO_000098 RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RHABOEDO_000099 RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RHABOEDO_000097 RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RHABOEDO_000715 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RHABOEDO_000398 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RHABOEDO_001135 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RHABOEDO_001420 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RHABOEDO_000925 DNA polymerase III K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RHABOEDO_001030 DNA polymerase III K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RHABOEDO_000746 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000884 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001785 3'-5' exonuclease DinG K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001366 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:rhaw03250]
D RHABOEDO_000964 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rhaw02010]
D RHABOEDO_001778 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RHABOEDO_000771 Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D RHABOEDO_000772 Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D RHABOEDO_000773 Spermidine/putrescine import ATP-binding proteinPotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RHABOEDO_000906 MlaD protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RHABOEDO_000908 Intermembrane phospholipid transport system permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RHABOEDO_000907 putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RHABOEDO_000032 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000145 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000486 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000556 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000820 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001140 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001712 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001773 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001800 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001154 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RHABOEDO_001153 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RHABOEDO_001740 High-affinity zinc uptake system binding-proteinZnuA K09815 znuA; zinc transport system substrate-binding protein
D RHABOEDO_001742 Manganese transport system membrane protein MntB K09816 znuB; zinc transport system permease protein
D RHABOEDO_001741 Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RHABOEDO_001468 Manganese-binding lipoprotein MntA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RHABOEDO_001466 Manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein
D RHABOEDO_001465 Manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein
D RHABOEDO_001467 Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RHABOEDO_001387 Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RHABOEDO_000281 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RHABOEDO_000280 Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RHABOEDO_001090 lipoprotein releasing system K09808 lolC_E; lipoprotein-releasing system permease protein
D RHABOEDO_001089 Lipoprotein-releasing system ATP-binding proteinLolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RHABOEDO_000687 Lipopolysaccharide export system permease LptF/LptG K07091 lptF; lipopolysaccharide export system permease protein
D RHABOEDO_000686 Lipopolysaccharide export system permease LptF/LptG K11720 lptG; lipopolysaccharide export system permease protein
D RHABOEDO_001626 Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
C 02060 Phosphotransferase system (PTS) [PATH:rhaw02060]
D RHABOEDO_001425 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RHABOEDO_000732 PTS HPr component phosphorylation site K02784 ptsH; phosphocarrier protein HPr
D RHABOEDO_001426 HPr-like protein Crh K02784 ptsH; phosphocarrier protein HPr
D RHABOEDO_001529 Phosphoenolpyruvate-dependent sugar phosphotransferase system K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RHABOEDO_001530 PTS system fructose-specific EIIABC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rhaw03070]
D RHABOEDO_001593 Type 3 secretion system secretin K03219 yscC; type III secretion protein C
D RHABOEDO_001619 Type 3 secretion system secretin K03219 yscC; type III secretion protein C
D RHABOEDO_001337 HrpJ-like domain K04058 yscW; type III secretion protein W
D RHABOEDO_000338 Secretory protein of YscJ/FliF family K03222 yscJ; type III secretion protein J
D RHABOEDO_000335 Flagellar biosynthetic protein FliP K03226 yscR; type III secretion protein R
D RHABOEDO_000334 Surface presentation of antigens protein SpaQ K03227 yscS; type III secretion protein S
D RHABOEDO_000333 Bacterial export protein K03228 yscT; type III secretion protein T
D RHABOEDO_001335 Yop proteins translocation protein U K03229 yscU; type III secretion protein U
D RHABOEDO_001336 Invasion protein InvA K03230 yscV; type III secretion protein V
D RHABOEDO_001579 putative ATP synthase YscN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RHABOEDO_000336 Yop proteins translocation protein L K03223 yscL; type III secretion protein L
D RHABOEDO_000123 Type 3 secretion system secretin K02453 gspD; general secretion pathway protein D
D RHABOEDO_000125 Putative type II secretion system protein F K02455 gspF; general secretion pathway protein F
D RHABOEDO_000124 Type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RHABOEDO_000366 Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D RHABOEDO_000809 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RHABOEDO_001050 Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RHABOEDO_000439 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RHABOEDO_001683 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RHABOEDO_000999 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RHABOEDO_000041 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RHABOEDO_001363 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RHABOEDO_000704 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rhaw02020]
D RHABOEDO_000003 Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RHABOEDO_000236 Transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D RHABOEDO_001358 Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D RHABOEDO_001214 Multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
D RHABOEDO_000998 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001492 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001147 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D RHABOEDO_000397 Membrane sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D RHABOEDO_000452 Cytochrome bd-II ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RHABOEDO_000877 Cytochrome bd terminal oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RHABOEDO_000449 Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RHABOEDO_000876 Cytochrome bd-II ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rhaw02024]
D RHABOEDO_000851 Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RHABOEDO_000953 Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D RHABOEDO_000962 Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D RHABOEDO_000032 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000145 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000486 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000556 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000820 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001140 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001712 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001773 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001800 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001154 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RHABOEDO_001153 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RHABOEDO_001152 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RHABOEDO_001151 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RHABOEDO_000999 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RHABOEDO_000366 Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D RHABOEDO_000809 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RHABOEDO_001050 Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RHABOEDO_000439 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RHABOEDO_001683 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RHABOEDO_000041 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RHABOEDO_001363 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RHABOEDO_000704 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D RHABOEDO_001583 Type III flagellar switch regulator (C-ring) FliN C-term K02417 fliN; flagellar motor switch protein FliN
C 02040 Flagellar assembly [PATH:rhaw02040]
D RHABOEDO_001583 Type III flagellar switch regulator (C-ring) FliN C-term K02417 fliN; flagellar motor switch protein FliN
D RHABOEDO_000102 RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rhaw01501]
D RHABOEDO_000032 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000145 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000486 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000556 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000820 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001140 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001712 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001773 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001800 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001154 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RHABOEDO_001153 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RHABOEDO_001485 putative peptidoglycan D,D-transpeptidase PenA K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rhaw01502]
D RHABOEDO_000358 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001398 UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001409 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RHABOEDO_001408 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RHABOEDO_001399 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rhaw01503]
D RHABOEDO_001358 Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D RHABOEDO_000964 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RHABOEDO_000413 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rhaw01000]
C 01001 Protein kinases [BR:rhaw01001]
D RHABOEDO_000865 Serine/threonine-protein kinase PknD K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RHABOEDO_000003 Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rhaw01009]
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RHABOEDO_001234 Serine/threonine phosphatase stp K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:rhaw01002]
D RHABOEDO_001727 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RHABOEDO_000950 Glutamine--fructose-6-phosphate aminotransferase[isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RHABOEDO_000211 Asparagine synthetase [glutamine-hydrolyzing] 1 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D RHABOEDO_000301 CPBP intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RHABOEDO_001233 CPBP intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D RHABOEDO_000731 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RHABOEDO_001356 Peptidase M16C associated K06972 PITRM1; presequence protease [EC:3.4.24.-]
D RHABOEDO_001252 putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RHABOEDO_000642 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RHABOEDO_000002 Aminopeptidase YpdF K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RHABOEDO_000684 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RHABOEDO_000689 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RHABOEDO_000639 Protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RHABOEDO_001463 Peptidase family M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RHABOEDO_001358 Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D RHABOEDO_000404 D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RHABOEDO_000723 D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RHABOEDO_000483 ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RHABOEDO_001644 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RHABOEDO_000467 Lon protease 2 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RHABOEDO_001263 Peptidase S24-like K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RHABOEDO_000362 Tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RHABOEDO_001750 Tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RHABOEDO_000469 Rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
C 01003 Glycosyltransferases [BR:rhaw01003]
D RHABOEDO_000618 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rhaw01005]
D RHABOEDO_000413 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RHABOEDO_000588 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RHABOEDO_000411 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RHABOEDO_000761 UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RHABOEDO_001716 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RHABOEDO_000874 Lipid A biosynthesis lauroyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RHABOEDO_001139 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RHABOEDO_001623 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RHABOEDO_000318 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RHABOEDO_001709 Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RHABOEDO_001249 Lipopolysaccharide heptosyltransferase 1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RHABOEDO_000228 ADP-heptose--LPS heptosyltransferase 2 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RHABOEDO_000880 D-inositol-3-phosphate glycosyltransferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D RHABOEDO_001717 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RHABOEDO_000633 Bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D RHABOEDO_000632 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhaw01011]
D RHABOEDO_000357 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RHABOEDO_000886 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RHABOEDO_001398 UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_001402 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RHABOEDO_001484 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RHABOEDO_000358 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RHABOEDO_000237 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RHABOEDO_001408 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RHABOEDO_001399 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RHABOEDO_001434 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RHABOEDO_000455 Lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RHABOEDO_001485 putative peptidoglycan D,D-transpeptidase PenA K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RHABOEDO_000404 D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RHABOEDO_000723 D-alanyl-D-alanine carboxypeptidase DacB K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 01004 Lipid biosynthesis proteins [BR:rhaw01004]
D RHABOEDO_000766 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RHABOEDO_000765 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RHABOEDO_001390 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RHABOEDO_000767 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RHABOEDO_000412 3-hydroxyacyl-[acyl-carrier-protein] dehydrataseFabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RHABOEDO_000922 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RHABOEDO_000583 Acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D RHABOEDO_000585 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RHABOEDO_000383 Bifunctional protein Aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rhaw01008]
D RHABOEDO_001898 hypothetical protein K19580 rppA; 1,3,6,8-tetrahydroxynaphthalene synthase [EC:2.3.1.233]
C 01006 Prenyltransferases [BR:rhaw01006]
D RHABOEDO_000139 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RHABOEDO_001087 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RHABOEDO_000380 Isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RHABOEDO_001395 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RHABOEDO_001005 dihydroxy-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D RHABOEDO_001119 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rhaw01007]
D RHABOEDO_000361 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RHABOEDO_000739 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RHABOEDO_000866 Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RHABOEDO_001377 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RHABOEDO_001780 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RHABOEDO_000712 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RHABOEDO_001266 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RHABOEDO_000861 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RHABOEDO_001138 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RHABOEDO_001370 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RHABOEDO_000388 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RHABOEDO_001608 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RHABOEDO_000389 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RHABOEDO_000190 Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_001111 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RHABOEDO_001513 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RHABOEDO_000073 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_000891 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_001663 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RHABOEDO_000895 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RHABOEDO_000522 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RHABOEDO_000112 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RHABOEDO_001539 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D RHABOEDO_001546 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RHABOEDO_000915 Glutamate-1-semialdehyde 2,1-aminomutase 1 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RHABOEDO_001686 D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rhaw00194]
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rhaw03000]
D RHABOEDO_001761 Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RHABOEDO_001458 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RHABOEDO_000905 UPF0301 protein K07735 algH; putative transcriptional regulator
D RHABOEDO_001728 General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D RHABOEDO_001729 Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D RHABOEDO_001489 Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rhaw03021]
D RHABOEDO_000442 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RHABOEDO_000815 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RHABOEDO_000816 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RHABOEDO_000102 RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D RHABOEDO_001324 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RHABOEDO_000885 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RHABOEDO_000810 Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RHABOEDO_001728 General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D RHABOEDO_001797 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rhaw03019]
D RHABOEDO_000584 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RHABOEDO_001538 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RHABOEDO_001067 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RHABOEDO_000694 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RHABOEDO_001797 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RHABOEDO_001460 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RHABOEDO_000187 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000729 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001411 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000270 CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RHABOEDO_000590 Poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:rhaw03011]
D RHABOEDO_001323 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RHABOEDO_000283 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RHABOEDO_000427 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RHABOEDO_000508 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RHABOEDO_000437 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RHABOEDO_000629 Ribosomal protein S18 K02990 RP-S6; small subunit ribosomal protein S6
D RHABOEDO_001752 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RHABOEDO_000434 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RHABOEDO_000682 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RHABOEDO_001754 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RHABOEDO_000441 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RHABOEDO_001751 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RHABOEDO_000440 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RHABOEDO_000602 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RHABOEDO_000695 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RHABOEDO_000705 Ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RHABOEDO_000430 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RHABOEDO_000425 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RHABOEDO_000101 Ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RHABOEDO_000465 Ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RHABOEDO_000812 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RHABOEDO_000424 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RHABOEDO_000421 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RHABOEDO_000422 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RHABOEDO_000433 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RHABOEDO_000435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RHABOEDO_000630 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RHABOEDO_000813 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RHABOEDO_000811 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RHABOEDO_000814 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RHABOEDO_000681 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RHABOEDO_000431 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RHABOEDO_000438 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RHABOEDO_000428 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RHABOEDO_000443 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RHABOEDO_000436 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RHABOEDO_000707 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RHABOEDO_000894 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RHABOEDO_001744 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RHABOEDO_000426 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RHABOEDO_000423 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RHABOEDO_000432 Ribosomal proteins 50S L24/mitochondrial 39S L24 K02895 RP-L24; large subunit ribosomal protein L24
D RHABOEDO_001745 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RHABOEDO_000648 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RHABOEDO_000429 Ribosomal L29 protein K02904 RP-L29; large subunit ribosomal protein L29
D RHABOEDO_000701 Ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RHABOEDO_000586 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RHABOEDO_001091 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RHABOEDO_000600 Ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D RHABOEDO_000893 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RHABOEDO_000601 Ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D RHABOEDO_000627 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:rhaw03009]
D RHABOEDO_001538 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RHABOEDO_001746 GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D RHABOEDO_001728 General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D RHABOEDO_001324 Transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RHABOEDO_000885 Transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D RHABOEDO_000810 Transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RHABOEDO_000405 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RHABOEDO_000021 Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RHABOEDO_000873 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RHABOEDO_001487 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RHABOEDO_000926 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RHABOEDO_001410 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RHABOEDO_001721 Ribosomal RNA large subunit methyltransferase K/L K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RHABOEDO_001334 Ribosomal RNA large subunit methyltransferase L K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RHABOEDO_000616 putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RHABOEDO_000134 putative RNA methyltransferase SP_1029 K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RHABOEDO_001684 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RHABOEDO_001769 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RHABOEDO_001251 RNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RHABOEDO_000976 RNA pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RHABOEDO_001616 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RHABOEDO_001719 Ribosomal large subunit pseudouridine synthase C K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RHABOEDO_001158 Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RHABOEDO_000584 Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RHABOEDO_001109 Putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RHABOEDO_000201 Small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RHABOEDO_001596 GTPase Der K03977 engA; GTPase
D RHABOEDO_000661 GTPase HflX K03665 hflX; GTPase
D RHABOEDO_000969 Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RHABOEDO_001326 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RHABOEDO_001391 Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D RHABOEDO_001061 Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D RHABOEDO_000545 Ribosome hibernation promotion factor K05808 hpf; ribosome hibernation promoting factor
D RHABOEDO_001333 Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D RHABOEDO_000587 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rhaw03016]
D RHABOEDO_000470 Ribonuclease BN K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RHABOEDO_000361 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RHABOEDO_001513 Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RHABOEDO_001266 Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RHABOEDO_001138 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RHABOEDO_000712 Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RHABOEDO_001780 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RHABOEDO_001370 Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RHABOEDO_000388 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RHABOEDO_001663 Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RHABOEDO_001608 Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D RHABOEDO_000190 Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_000073 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_000891 Threonine--tRNA ligase 2 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RHABOEDO_001111 Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RHABOEDO_001377 Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RHABOEDO_000861 Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RHABOEDO_000389 Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RHABOEDO_000895 Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RHABOEDO_000522 Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RHABOEDO_000739 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RHABOEDO_000866 Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RHABOEDO_000802 Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RHABOEDO_001127 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RHABOEDO_000557 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RHABOEDO_000643 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RHABOEDO_001235 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001765 Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_000969 Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RHABOEDO_001395 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RHABOEDO_000038 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RHABOEDO_001806 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RHABOEDO_000599 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RHABOEDO_000613 Glycyl-tRNA synthetase beta subunit K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_000699 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RHABOEDO_000680 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RHABOEDO_000663 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RHABOEDO_000706 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RHABOEDO_000202 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03437 spoU; RNA methyltransferase, TrmH family
D RHABOEDO_000478 tRNA (guanosine(18)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RHABOEDO_001720 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RHABOEDO_001519 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RHABOEDO_001306 tRNA-cytidine(32) 2-sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RHABOEDO_000897 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RHABOEDO_000688 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RHABOEDO_001093 tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RHABOEDO_001783 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RHABOEDO_001067 Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RHABOEDO_000694 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rhaw03012]
D RHABOEDO_001325 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RHABOEDO_000892 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RHABOEDO_000284 Elongation factor Ts K02357 tsf; elongation factor Ts
D RHABOEDO_000808 Elongation factor Tu K02358 tuf; elongation factor Tu
D RHABOEDO_001753 Elongation factor G K02355 fusA; elongation factor G
D RHABOEDO_000702 Peptide chain release factor RF1 K02835 prfA; peptide chain release factor 1
D RHABOEDO_000286 Ribosome-recycling factor K02838 frr; ribosome recycling factor
D RHABOEDO_000703 Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RHABOEDO_000628 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RHABOEDO_000807 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RHABOEDO_001315 Elongation factor P K02356 efp; elongation factor P
D RHABOEDO_001669 Elongation factor P K02356 efp; elongation factor P
D RHABOEDO_001670 Elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D RHABOEDO_000566 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:rhaw03110]
D RHABOEDO_000652 Chaperone protein ClpB 1 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RHABOEDO_001515 ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D RHABOEDO_001645 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RHABOEDO_001460 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RHABOEDO_000187 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000729 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001411 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000464 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RHABOEDO_001459 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D RHABOEDO_000770 Hsp20/alpha crystallin family K13993 HSP20; HSP20 family protein
D RHABOEDO_001290 Hsp20/alpha crystallin family K13993 HSP20; HSP20 family protein
D RHABOEDO_000186 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D RHABOEDO_000730 10 kDa chaperonin K04078 groES; chaperonin GroES
D RHABOEDO_001358 Periplasmic pH-dependent serine endoprotease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D RHABOEDO_000689 ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RHABOEDO_000964 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RHABOEDO_000781 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RHABOEDO_000975 Outer membrane protein MIP K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D RHABOEDO_000385 Thioredoxin K03671 TXN; thioredoxin
D RHABOEDO_000978 hypothetical protein K03671 TXN; thioredoxin
D RHABOEDO_000312 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
C 04131 Membrane trafficking [BR:rhaw04131]
D RHABOEDO_001627 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RHABOEDO_000444 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RHABOEDO_001766 bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RHABOEDO_000871 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:rhaw03051]
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rhaw03032]
D RHABOEDO_000998 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001492 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001805 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RHABOEDO_000611 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_000398 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RHABOEDO_001135 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RHABOEDO_000925 DNA polymerase III K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RHABOEDO_001030 DNA polymerase III K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RHABOEDO_000746 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000884 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001785 3'-5' exonuclease DinG K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001420 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RHABOEDO_000708 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RHABOEDO_001185 Ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RHABOEDO_001028 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RHABOEDO_001027 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RHABOEDO_000170 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rhaw03036]
D RHABOEDO_001538 Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RHABOEDO_000998 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001492 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RHABOEDO_001120 DNA protection during starvation protein 1 K04047 dps; starvation-inducible DNA-binding protein
D RHABOEDO_001485 putative peptidoglycan D,D-transpeptidase PenA K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RHABOEDO_001435 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RHABOEDO_001400 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D RHABOEDO_001638 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RHABOEDO_001760 Peptidoglycan glycosyltransferase MrdB K05837 rodA; rod shape determining protein RodA
D RHABOEDO_000072 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D RHABOEDO_001873 Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
D RHABOEDO_001806 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RHABOEDO_000480 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RHABOEDO_001217 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RHABOEDO_001888 Tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD
D RHABOEDO_001038 Fic/DOC family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RHABOEDO_000544 Fic/DOC family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D RHABOEDO_001784 putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rhaw03400]
D RHABOEDO_000520 Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D RHABOEDO_001192 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RHABOEDO_000065 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D RHABOEDO_001066 Putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D RHABOEDO_000118 Adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RHABOEDO_000039 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RHABOEDO_000290 NUDIX domain K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RHABOEDO_000849 RNA pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RHABOEDO_001531 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RHABOEDO_001174 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RHABOEDO_001607 Endonuclease 4 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D RHABOEDO_000365 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RHABOEDO_000678 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RHABOEDO_001795 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RHABOEDO_000870 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D RHABOEDO_000253 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D RHABOEDO_000608 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D RHABOEDO_000183 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_000598 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RHABOEDO_000815 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RHABOEDO_000816 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RHABOEDO_000442 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RHABOEDO_001664 Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RHABOEDO_000609 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RHABOEDO_000001 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RHABOEDO_001036 Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RHABOEDO_001035 Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RHABOEDO_000398 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RHABOEDO_001135 Beta sliding clamp K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RHABOEDO_000925 DNA polymerase III K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RHABOEDO_001030 DNA polymerase III K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RHABOEDO_000746 DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_000884 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001785 3'-5' exonuclease DinG K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RHABOEDO_001420 DNA polymerase III K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_000098 RecBCD enzyme subunit RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D RHABOEDO_000099 RecBCD enzyme subunit RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D RHABOEDO_000097 RecBCD enzyme subunit RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RHABOEDO_000715 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D RHABOEDO_000142 Protein RecA K03553 recA; recombination protein RecA
D RHABOEDO_000030 Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RHABOEDO_001240 Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RHABOEDO_000029 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RHABOEDO_001366 Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RHABOEDO_001537 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RHABOEDO_001134 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RHABOEDO_000067 Putative ATP-dependent DNA helicase recG C-terminal K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RHABOEDO_000543 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RHABOEDO_000764 Recombination protein RecR K06187 recR; recombination protein RecR
D RHABOEDO_001028 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RHABOEDO_001027 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RHABOEDO_000170 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RHABOEDO_001611 Regulatory protein RecX K03565 recX; regulatory protein
D RHABOEDO_000103 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RHABOEDO_001346 Ribonucleotide reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RHABOEDO_001347 Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rhaw03029]
D RHABOEDO_001325 Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RHABOEDO_000892 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RHABOEDO_000284 Elongation factor Ts K02357 tsf; elongation factor Ts
D RHABOEDO_000808 Elongation factor Tu K02358 tuf; elongation factor Tu
D RHABOEDO_001753 Elongation factor G K02355 fusA; elongation factor G
D RHABOEDO_000739 Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RHABOEDO_001138 Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RHABOEDO_000388 Aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RHABOEDO_000190 Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RHABOEDO_001780 Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RHABOEDO_001204 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001205 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferasesubunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001203 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RHABOEDO_001253 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RHABOEDO_000763 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RHABOEDO_001460 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RHABOEDO_001459 Protein GrpE K03687 GRPE; molecular chaperone GrpE
D RHABOEDO_000187 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000729 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001411 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000186 10 kDa chaperonin 1 K04078 groES; chaperonin GroES
D RHABOEDO_000730 10 kDa chaperonin K04078 groES; chaperonin GroES
D RHABOEDO_000464 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RHABOEDO_001235 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001765 Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001119 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RHABOEDO_000999 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rhaw02000]
D RHABOEDO_000209 Putative multidrug export ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RHABOEDO_001688 Energy-dependent translational throttle protein EttA K15738 uup; ABC transport system ATP-binding/permease protein
D RHABOEDO_001778 Spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RHABOEDO_000771 Inner membrane ABC transporter permease protein YdcV K11070 potC; spermidine/putrescine transport system permease protein
D RHABOEDO_000772 Spermidine/putrescine transport system permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D RHABOEDO_000773 Spermidine/putrescine import ATP-binding proteinPotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RHABOEDO_000906 MlaD protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RHABOEDO_000908 Intermembrane phospholipid transport system permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RHABOEDO_000907 putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RHABOEDO_000345 L-cystine-binding protein FliY K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RHABOEDO_000032 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000145 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000486 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000556 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_000820 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001140 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001712 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001773 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001800 Oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D RHABOEDO_001154 Oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D RHABOEDO_001153 Oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D RHABOEDO_001152 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RHABOEDO_001151 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RHABOEDO_001740 High-affinity zinc uptake system binding-proteinZnuA K09815 znuA; zinc transport system substrate-binding protein
D RHABOEDO_001742 Manganese transport system membrane protein MntB K09816 znuB; zinc transport system permease protein
D RHABOEDO_001741 Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RHABOEDO_001468 Manganese-binding lipoprotein MntA K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D RHABOEDO_001466 Manganese transport system membrane protein MntC K11708 troC; manganese/zinc/iron transport system permease protein
D RHABOEDO_001465 Manganese transport system membrane protein MntD K11709 troD; manganese/zinc/iron transport system permease protein
D RHABOEDO_001467 Manganese transport system ATP-binding protein MntB K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D RHABOEDO_001387 Biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D RHABOEDO_000281 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D RHABOEDO_000280 Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D RHABOEDO_000687 Lipopolysaccharide export system permease LptF/LptG K07091 lptF; lipopolysaccharide export system permease protein
D RHABOEDO_000686 Lipopolysaccharide export system permease LptF/LptG K11720 lptG; lipopolysaccharide export system permease protein
D RHABOEDO_001626 Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RHABOEDO_001090 lipoprotein releasing system K09808 lolC_E; lipoprotein-releasing system permease protein
D RHABOEDO_001089 Lipoprotein-releasing system ATP-binding proteinLolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RHABOEDO_000324 putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RHABOEDO_000397 Membrane sensor protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D RHABOEDO_000542 Major Facilitator Superfamily K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RHABOEDO_000298 Major Facilitator Superfamily K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D RHABOEDO_001425 Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RHABOEDO_000732 PTS HPr component phosphorylation site K02784 ptsH; phosphocarrier protein HPr
D RHABOEDO_001426 HPr-like protein Crh K02784 ptsH; phosphocarrier protein HPr
D RHABOEDO_001529 Phosphoenolpyruvate-dependent sugar phosphotransferase system K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RHABOEDO_001530 PTS system fructose-specific EIIABC component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RHABOEDO_001793 Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D RHABOEDO_001025 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D RHABOEDO_001126 MotA/TolQ/ExbB proton channel family K03561 exbB; biopolymer transport protein ExbB
D RHABOEDO_000242 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RHABOEDO_001125 hypothetical protein K03559 exbD; biopolymer transport protein ExbD
D RHABOEDO_000243 Biopolymer transport protein ExbB K03562 tolQ; biopolymer transport protein TolQ
D RHABOEDO_000753 Cobalt/magnesium transport protein CorA K03284 corA; magnesium transporter
D RHABOEDO_001237 Cyclin M transmembrane N-terminal domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RHABOEDO_001236 UPF0053 inner membrane protein YfjD K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RHABOEDO_001060 Transporter associated domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RHABOEDO_000763 Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RHABOEDO_000914 Translocation and assembly module subunit TamA K07278 tamA; translocation and assembly module TamA
D RHABOEDO_000913 TamB K09800 tamB; translocation and assembly module TamB
D RHABOEDO_000953 Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D RHABOEDO_000962 Glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter
D RHABOEDO_000972 Guanidinium exporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RHABOEDO_001307 High-affinity proline transporter PutP K11928 putP; sodium/proline symporter
D RHABOEDO_000788 Sodium/hydrogen exchanger family K26730 napA; Na+:H+ antiporter
D RHABOEDO_000252 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D RHABOEDO_000804 Tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D RHABOEDO_000455 Lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RHABOEDO_000898 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D RHABOEDO_000899 UPF0056 inner membrane protein MarC K05595 marC; multiple antibiotic resistance protein
D RHABOEDO_001400 putative peptidoglycan glycosyltransferase FtsW K03588 ftsW; cell division protein FtsW
D RHABOEDO_000239 Peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D RHABOEDO_000240 Tol-Pal system protein TolB K03641 tolB; TolB protein
D RHABOEDO_001214 Multidrug resistance protein MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system
C 02044 Secretion system [BR:rhaw02044]
D RHABOEDO_000123 Type 3 secretion system secretin K02453 gspD; general secretion pathway protein D
D RHABOEDO_000124 Type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RHABOEDO_000125 Putative type II secretion system protein F K02455 gspF; general secretion pathway protein F
D RHABOEDO_000151 YGGT family K02221 yggT; YggT family protein
D RHABOEDO_001593 Type 3 secretion system secretin K03219 yscC; type III secretion protein C
D RHABOEDO_001619 Type 3 secretion system secretin K03219 yscC; type III secretion protein C
D RHABOEDO_000338 Secretory protein of YscJ/FliF family K03222 yscJ; type III secretion protein J
D RHABOEDO_000336 Yop proteins translocation protein L K03223 yscL; type III secretion protein L
D RHABOEDO_001579 putative ATP synthase YscN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RHABOEDO_000335 Flagellar biosynthetic protein FliP K03226 yscR; type III secretion protein R
D RHABOEDO_000334 Surface presentation of antigens protein SpaQ K03227 yscS; type III secretion protein S
D RHABOEDO_000333 Bacterial export protein K03228 yscT; type III secretion protein T
D RHABOEDO_001335 Yop proteins translocation protein U K03229 yscU; type III secretion protein U
D RHABOEDO_001336 Invasion protein InvA K03230 yscV; type III secretion protein V
D RHABOEDO_001337 HrpJ-like domain K04058 yscW; type III secretion protein W
D RHABOEDO_001583 Type III flagellar switch regulator (C-ring) FliN C-term K02417 fliN; flagellar motor switch protein FliN
D RHABOEDO_000041 Protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RHABOEDO_000366 Protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D RHABOEDO_000809 Protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RHABOEDO_001050 Preprotein translocase SecG subunit K03075 secG; preprotein translocase subunit SecG
D RHABOEDO_000439 Protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RHABOEDO_000704 Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RHABOEDO_001363 Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D RHABOEDO_001683 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RHABOEDO_000999 Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:rhaw02042]
D RHABOEDO_001237 Cyclin M transmembrane N-terminal domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RHABOEDO_001236 UPF0053 inner membrane protein YfjD K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RHABOEDO_001060 Transporter associated domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rhaw02022]
D RHABOEDO_000003 Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RHABOEDO_000236 Transcriptional regulatory protein WalR K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
C 02035 Bacterial motility proteins [BR:rhaw02035]
D RHABOEDO_001583 Type III flagellar switch regulator (C-ring) FliN C-term K02417 fliN; flagellar motor switch protein FliN
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rhaw04812]
D RHABOEDO_001638 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RHABOEDO_000072 Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D RHABOEDO_001873 Chromosome-partitioning ATPase Soj K03496 parA; chromosome partitioning protein
C 04147 Exosome [BR:rhaw04147]
D RHABOEDO_001673 Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D RHABOEDO_000200 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RHABOEDO_000444 Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RHABOEDO_001786 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RHABOEDO_000871 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RHABOEDO_000964 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D RHABOEDO_000195 Alkyl hydroperoxide reductase C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D RHABOEDO_000187 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_000729 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001411 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RHABOEDO_001460 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RHABOEDO_001132 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RHABOEDO_001143 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RHABOEDO_000808 Elongation factor Tu K02358 tuf; elongation factor Tu
D RHABOEDO_000802 Purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RHABOEDO_001291 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RHABOEDO_000677 alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RHABOEDO_000250 Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RHABOEDO_000043 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_000937 Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RHABOEDO_001108 Glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RHABOEDO_001049 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RHABOEDO_001766 bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rhaw02048]
D RHABOEDO_000988 Fic/DOC family K07341 doc; death on curing protein
D RHABOEDO_001638 Cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RHABOEDO_000361 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RHABOEDO_001235 Cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RHABOEDO_001765 Cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rhaw01504]
D RHABOEDO_000542 Major Facilitator Superfamily K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RHABOEDO_000231 Virginiamycin A acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D RHABOEDO_001699 Chloramphenicol phosphotransferase-like protein K18554 cpt; chloramphenicol 3-O phosphotransferase [EC:2.7.1.-]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rhaw03100]
D RHABOEDO_001817 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RHABOEDO_001845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RHABOEDO_001854 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RHABOEDO_001828 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RHABOEDO_001850 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RHABOEDO_001829 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RHABOEDO_001820 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RHABOEDO_001855 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001856 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001819 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RHABOEDO_001844 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RHABOEDO_001821 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RHABOEDO_001838 tRNA-Met K14230 tRNA-Met; tRNA Met
D RHABOEDO_001861 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RHABOEDO_001816 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RHABOEDO_001832 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RHABOEDO_001834 tRNA-Val K14237 tRNA-Val; tRNA Val
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RHABOEDO_000294 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RHABOEDO_001789 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RHABOEDO_000456 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RHABOEDO_001148 Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RHABOEDO_000779 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RHABOEDO_000878 Cyclic di-AMP synthase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D RHABOEDO_000560 UTP--glucose-1-phosphate uridylyltransferase K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D RHABOEDO_001427 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RHABOEDO_000296 Protein-arginine kinase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D RHABOEDO_000887 5'-3' exoribonuclease K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RHABOEDO_001419 7TM-HD extracellular K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D RHABOEDO_000260 putative metal-dependent hydrolase YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RHABOEDO_000791 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RHABOEDO_001051 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RHABOEDO_000224 Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RHABOEDO_000387 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D RHABOEDO_001446 putative cadmium-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D RHABOEDO_001764 NifU-like N terminal domain K13819 K13819; NifU-like protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D RHABOEDO_000410 DoxX K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
C 99974 Translation
C 99975 Protein processing
D RHABOEDO_000297 hypothetical protein K19411 mcsA; protein arginine kinase activator
D RHABOEDO_001643 Trigger factor K03545 tig; trigger factor
D RHABOEDO_001136 SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D RHABOEDO_000662 UPF0758 protein YsxA K03630 radC; DNA repair protein RadC
D RHABOEDO_001344 RmuC family K09760 rmuC; DNA recombination protein RmuC
D RHABOEDO_000961 Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RHABOEDO_000008 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000033 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000036 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000055 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000074 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000076 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000086 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000094 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000108 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000162 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000168 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000266 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000272 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000276 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000302 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000328 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000368 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000370 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000375 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000392 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000416 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000472 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000492 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000495 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000518 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000533 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000535 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000538 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000581 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000623 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000657 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000669 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000672 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000719 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000769 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000821 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000882 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_000979 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001000 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001010 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001023 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001077 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001081 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001149 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001195 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001199 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001224 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001230 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001265 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001269 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001277 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001297 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001328 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001374 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001381 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001403 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001451 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001496 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001511 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001526 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001552 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001564 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001601 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001612 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001629 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001656 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001661 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001681 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001696 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001747 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001756 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001799 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001802 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
D RHABOEDO_001813 Transposase ISRhOegibbosus1 K07482 K07482; transposase, IS30 family
C 99979 Viral proteins
C 99998 Others
D RHABOEDO_001421 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RHABOEDO_001524 putative amino acid permease YhdG K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D RHABOEDO_001144 TLC ATP/ADP transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001145 TLC ATP/ADP transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001146 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001289 ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001470 ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001787 ADP,ATP carrier protein 1 K03301 TC.AAA; ATP:ADP antiporter, AAA family
D RHABOEDO_001250 Dipeptide and tripeptide permease B K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D RHABOEDO_000902 Phosphate transporter family K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RHABOEDO_001771 Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RHABOEDO_000724 Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RHABOEDO_000852 Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D RHABOEDO_001018 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RHABOEDO_000665 PhoH-like protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D RHABOEDO_000762 Outer membrane protein (OmpH-like) K06142 hlpA; outer membrane protein
C 99994 Others
D RHABOEDO_001104 Putative membrane-bound redox modulator Alx K05794 terC; tellurite resistance protein TerC
D RHABOEDO_001565 Divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RHABOEDO_001316 Haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D RHABOEDO_000931 Iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RHABOEDO_000323 FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RHABOEDO_000325 UPF0051 protein K09015 sufD; Fe-S cluster assembly protein SufD
D RHABOEDO_000509 UPF0176 protein K07146 K07146; UPF0176 protein
D RHABOEDO_000945 protein of unknown function (DUF202) K00389 yidH; putative membrane protein
C 99997 Function unknown
D RHABOEDO_001141 ATPase domain predominantly from Archaea K06921 K06921; uncharacterized protein
D RHABOEDO_001416 Putative zinc-or iron-chelating domain K06940 K06940; uncharacterized protein
D RHABOEDO_001396 UPF0109 protein K06960 K06960; uncharacterized protein
D RHABOEDO_001617 UPF0109 protein K06960 K06960; uncharacterized protein
D RHABOEDO_000198 Sulfatase K07014 K07014; uncharacterized protein
D RHABOEDO_001194 Epimerase family protein K07071 K07071; uncharacterized protein
D RHABOEDO_000047 Calcineurin-like phosphoesterase K07099 K07099; uncharacterized protein
D RHABOEDO_000974 SET domain K07117 K07117; uncharacterized protein
D RHABOEDO_001418 Serine 3-dehydrogenase K07124 K07124; uncharacterized protein
D RHABOEDO_000806 Sulfur acceptor protein CsdE K07125 K07125; uncharacterized protein
D RHABOEDO_000020 MORN repeat variant K07126 K07126; uncharacterized protein
D RHABOEDO_001267 hypothetical protein K07126 K07126; uncharacterized protein
D RHABOEDO_001885 AAA domain K07133 K07133; uncharacterized protein
D RHABOEDO_000481 C4-type zinc ribbon domain K07164 K07164; uncharacterized protein
D RHABOEDO_000524 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D RHABOEDO_001595 Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D RHABOEDO_000735 Bifunctional nuclease K08999 K08999; uncharacterized protein
D RHABOEDO_001191 protein of unknown function (DUF378) K09779 K09779; uncharacterized protein
D RHABOEDO_001755 TraB family K09973 K09973; uncharacterized protein
D RHABOEDO_001770 UPF0111 protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 12, 2024