+D GENES KO
#
KEGG Orthology (KO) - Rhodovulum sp. P5
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rhc00010]
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RGUI_2206 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGUI_0563 Tagatose-6-phosphate kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_1726 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGUI_3495 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGUI_3307 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGUI_3497 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGUI_3496 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_1538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_1597 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGUI_3114 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGUI_3152 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGUI_1178 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGUI_3631 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGUI_1540 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RGUI_1542 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RGUI_1543 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3876 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RGUI_3875 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_3072 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGUI_2633 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_2890 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rhc00020]
D RGUI_0406 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D RGUI_0346 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGUI_3540 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGUI_0629 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGUI_0630 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_0631 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3876 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RGUI_3875 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RGUI_3874 2-oxoglutarate oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D RGUI_0627 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGUI_0626 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGUI_1050 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGUI_0616 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGUI_0615 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGUI_0618 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGUI_0617 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGUI_1043 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGUI_3758 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RGUI_2890 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGUI_1540 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RGUI_1542 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RGUI_1543 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rhc00030]
D RGUI_2206 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGUI_2208 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGUI_2207 6-phosphogluconolactonase, eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D RGUI_3493 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGUI_3498 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3957 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3958 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_1784 Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGUI_1211 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGUI_3725 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D RGUI_2475 Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D RGUI_0929 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_0641 ATP-binding protein PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D RGUI_1407 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGUI_3862 Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RGUI_3861 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGUI_3923 2-dehydro-3-deoxygluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D RGUI_2019 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGUI_3495 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_1726 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGUI_0563 Tagatose-6-phosphate kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rhc00040]
D RGUI_3966 Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D RGUI_3967 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D RGUI_3220 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGUI_2561 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGUI_3493 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGUI_0086 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D RGUI_2672 ATP synthase delta chain K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D RGUI_3933 Xylonate dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82]
D RGUI_2119 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D RGUI_1432 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:rhc00051]
D RGUI_1189 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGUI_4229 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGUI_2685 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGUI_1432 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D RGUI_3941 2-keto-3-deoxy-L-fuconate dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D RGUI_3949 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D RGUI_0582 Putative mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D RGUI_0563 Tagatose-6-phosphate kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_1726 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGUI_0088 Multiple polyol-specific dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D RGUI_3495 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGUI_3307 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGUI_2895 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:rhc00052]
D RGUI_0247 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGUI_2561 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RGUI_0089 Sorbitol dehydrogenase K21620 sorbD; galactitol 2-dehydrogenase [EC:1.1.1.16]
D RGUI_0563 Tagatose-6-phosphate kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RGUI_4304 Alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:rhc00053]
D RGUI_3220 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGUI_3623 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3959 L-2-keto-3-deoxyarabonate dehydratase K13876 araD; 2-keto-3-deoxy-L-arabinonate dehydratase [EC:4.2.1.43]
D RGUI_2119 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D RGUI_3939 UDP-glucose 4-epimerase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
D RGUI_3938 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27]
C 00500 Starch and sucrose metabolism [PATH:rhc00500]
D RGUI_4304 Alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D RGUI_2018 Sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D RGUI_2561 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGUI_4300 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RGUI_0392 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D RGUI_0391 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D RGUI_0393 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGUI_2397 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGUI_0394 Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D RGUI_0389 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D RGUI_0390 Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RGUI_2206 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGUI_1189 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rhc00520]
D RGUI_0760 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGUI_1189 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D RGUI_0450 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGUI_1174 Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RGUI_0449 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGUI_1533 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RGUI_2445 putative Ser/Thr protein kinase-like protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RGUI_2446 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RGUI_1101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1124 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1893 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_1098 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_2561 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGUI_3220 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGUI_0249 Nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
D RGUI_0247 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGUI_3623 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGUI_2895 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGUI_2206 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGUI_2685 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGUI_4229 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGUI_0392 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:rhc00620]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_3876 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RGUI_3875 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RGUI_1540 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RGUI_1542 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RGUI_1543 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_3072 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGUI_2633 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGUI_3627 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGUI_3152 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGUI_3141 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGUI_2571 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2573 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_3650 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2572 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_3649 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_2162 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_1050 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGUI_0532 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D RGUI_3925 D-Lactate dehydrogenase, cytochrome c-dependent K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RGUI_1881 D-Lactate dehydrogenase, cytochrome c-dependent K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D RGUI_3359 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGUI_1414 Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGUI_2953 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGUI_2474 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGUI_1051 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGUI_3758 Pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGUI_1043 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D RGUI_2890 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGUI_1178 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGUI_3631 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2945 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGUI_0732 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGUI_2008 Homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rhc00630]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGUI_0406 Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D RGUI_0346 Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3132 Acetoacetyl-CoA reductase of ethylmalonyl-CoA pathway K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGUI_1403 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RGUI_0609 Crotonyl-CoA carboxylase/reductase, ethylmalonyl-CoA producing K14446 ccr; crotonyl-CoA carboxylase/reductase [EC:1.3.1.85]
D RGUI_4005 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RGUI_0611 Ethylmalonyl-CoA mutase, methylsuccinyl-CoA-forming K14447 ecm; ethylmalonyl-CoA mutase [EC:5.4.99.63]
D RGUI_2888 Methylsuccinyl-CoA dehydrogenase K14448 mcd; (2S)-methylsuccinyl-CoA dehydrogenase [EC:1.3.8.12]
D RGUI_0619 Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RGUI_3145 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RGUI_0622 L-malyl-CoA/beta-methylmalyl-CoA lyase K14451 mcl2; (3S)-malyl-CoA thioesterase [EC:3.1.2.30]
D RGUI_1748 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGUI_1754 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGUI_1744 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGUI_0515 Glycolate dehydrogenase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RGUI_0514 Glycolate dehydrogenase, FAD-binding subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RGUI_0513 Glycolate dehydrogenase, iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RGUI_1621 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D RGUI_2953 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGUI_3489 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGUI_0448 Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGUI_1350 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGUI_1476 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGUI_3494 Ribulose bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGUI_2041 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGUI_2042 Ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RGUI_1762 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2048 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0462 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3737 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_1802 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGUI_1800 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1276 hypothetical protein K02437 gcvH; glycine cleavage system H protein
D RGUI_1801 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RGUI_2019 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGUI_3861 4-Hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGUI_3504 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RGUI_3506 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGUI_3709 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGUI_3507 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGUI_3708 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGUI_3508 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RGUI_3707 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RGUI_0502 putative esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGUI_1639 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGUI_0453 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:rhc00640]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_1780 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGUI_1779 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGUI_3627 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1029 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_3141 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGUI_2571 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2573 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_3650 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2572 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_3649 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_2162 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_1267 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGUI_1748 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGUI_1754 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGUI_4005 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RGUI_1744 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGUI_0626 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGUI_0627 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGUI_3912 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00650 Butanoate metabolism [PATH:rhc00650]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2899 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGUI_0224 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_2241 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D RGUI_3628 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_3629 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_1403 Acyl dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D RGUI_3799 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGUI_2385 Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGUI_3798 Polyhydroxyalkanoate depolymerase, intracellular K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RGUI_3132 Acetoacetyl-CoA reductase of ethylmalonyl-CoA pathway K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGUI_1051 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGUI_1052 Methylcrotonyl-CoA carboxylase biotin-containing subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGUI_1053 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RGUI_0616 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGUI_0615 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGUI_0618 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGUI_0617 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_3802 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D RGUI_1120 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGUI_1050 Acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D RGUI_3876 2-oxoglutarate oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D RGUI_3875 2-oxoglutarate oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D RGUI_0437 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGUI_3256 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGUI_3254 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGUI_0274 D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RGUI_3851 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_0196 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_2862 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_3850 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGUI_2217 Short-chain dehydrogenase/reductase SDR K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:rhc00660]
D RGUI_3851 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_0196 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_2862 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_3850 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGUI_0626 Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGUI_0627 Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGUI_3145 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RGUI_0619 Mesaconyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D RGUI_3929 Demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D RGUI_3109 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGUI_3107 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGUI_3104 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:rhc00562]
D RGUI_3698 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGUI_3284 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGUI_3912 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGUI_3307 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rhc00190]
D RGUI_0435 NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RGUI_0434 NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RGUI_0433 NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RGUI_0432 NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RGUI_0430 NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RGUI_0428 NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RGUI_0426 NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RGUI_0425 NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RGUI_0424 NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RGUI_0422 NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RGUI_0421 NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RGUI_0420 NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RGUI_0419 NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RGUI_0418 NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RGUI_0976 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RGUI_0616 Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGUI_0615 Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGUI_0618 Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGUI_0617 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGUI_2660 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGUI_2661 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGUI_2662 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGUI_1003 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGUI_1305 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGUI_1304 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGUI_1303 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGUI_1302 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGUI_2024 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RGUI_2025 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RGUI_2026 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RGUI_1259 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_0081 Sulfite dehydrogenase cytochrome subunit K08738 CYC; cytochrome c
D RGUI_2632 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_1975 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_3706 WD domain/cytochrome c family protein K08738 CYC; cytochrome c
D RGUI_1411 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGUI_1409 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGUI_1410 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGUI_1412 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGUI_1408 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGUI_2976 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGUI_2978 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGUI_2979 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGUI_2977 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGUI_2847 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D RGUI_2848 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D RGUI_2849 hypothetical protein K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D RGUI_2843 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D RGUI_2844 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D RGUI_0482 Lead, cadmium, zinc and mercury transporting ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D RGUI_1400 Manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D RGUI_1735 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGUI_0586 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGUI_0123 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:rhc00710]
D RGUI_3494 Ribulose bisphosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGUI_2041 Ribulose bisphosphate carboxylase large chain K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
D RGUI_2042 Ribulose bisphosphate carboxylase small chain K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]
D RGUI_3496 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_1538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_3497 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGUI_3495 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_1726 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGUI_3498 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3957 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3958 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_1211 Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGUI_3499 Phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D RGUI_3307 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGUI_3493 Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGUI_2890 Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D RGUI_1178 Pyruvate,phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D RGUI_2474 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rhc00680]
D RGUI_0956 Methanol dehydrogenase large subunit protein K23995 xoxF; lanthanide-dependent methanol dehydrogenase [EC:1.1.2.10]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_2154 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RGUI_0957 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RGUI_3506 NAD-dependent formate dehydrogenase alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGUI_3709 Formate dehydrogenase-O, major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGUI_3507 NAD-dependent formate dehydrogenase beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGUI_3708 Formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGUI_3508 NAD-dependent formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RGUI_3707 Formate dehydrogenase -O, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D RGUI_3504 NAD-dependent formate dehydrogenase delta subunit K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D RGUI_3847 Formate dehydrogenase-O, major subunit K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D RGUI_0462 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3737 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_1762 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2048 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2019 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGUI_3145 Malyl-CoA lyase K08691 mcl; malyl-CoA/(S)-citramalyl-CoA lyase [EC:4.1.3.24 4.1.3.25]
D RGUI_3495 Fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_1726 Fructose-1,6-bisphosphatase, GlpX type K11532 glpX-SEBP; fructose-1,6-bisphosphatase II / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37]
D RGUI_0563 Tagatose-6-phosphate kinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D RGUI_4107 Quinohemoprotein amine dehydrogenase alpha subunit K08685 qhpA; quinohemoprotein amine dehydrogenase [EC:1.4.9.1]
D RGUI_3212 Glutamine amidotransferase protein GlxB K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21]
D RGUI_3211 Glutamate synthase [NADPH] putative GlxC chain K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21]
D RGUI_3210 Glutamate synthase [NADPH] large chain K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D RGUI_3208 Sarcosine oxidase beta subunit K22084 mgdA; methylglutamate dehydrogenase subunit A [EC:1.5.99.5]
D RGUI_3207 Sarcosine oxidase delta subunit K22085 mgdB; methylglutamate dehydrogenase subunit B [EC:1.5.99.5]
D RGUI_3206 Sarcosine oxidase alpha subunit K22086 mgdC; methylglutamate dehydrogenase subunit C [EC:1.5.99.5]
D RGUI_3205 Sarcosine oxidase gamma subunit K22087 mgdD; methylglutamate dehydrogenase subunit D [EC:1.5.99.5]
D RGUI_1281 CoB--CoM heterodisulfide reductase subunit A K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RGUI_1278 CoB--CoM heterodisulfide reductase subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RGUI_1282 CoB--CoM heterodisulfide reductase subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RGUI_1283 CoB--CoM heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RGUI_1279 CoB--CoM heterodisulfide reductase subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D RGUI_3627 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_3631 Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGUI_1597 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGUI_3114 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGUI_1927 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2195 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2196 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGUI_3025 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RGUI_0134 Trimethylamine methyltransferase family protein K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
C 00910 Nitrogen metabolism [PATH:rhc00910]
D RGUI_2226 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGUI_2227 Alkanesulfonates transport system permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RGUI_2228 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGUI_2232 Assimilatory nitrate reductase large subunit K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RGUI_2230 Nitrite reductase [NAD(P)H] large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RGUI_2231 Nitrite reductase [NAD(P)H] small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D RGUI_2360 Nitrogenase (molybdenum-iron) alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RGUI_2361 Nitrogenase (molybdenum-iron) beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGUI_2359 Nitrogenase (molybdenum-iron) reductase and maturation protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGUI_2297 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_2292 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGUI_2294 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGUI_2220 Cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RGUI_3327 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rhc00920]
D RGUI_0796 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGUI_0798 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RGUI_0797 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGUI_2130 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RGUI_2559 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGUI_0587 Phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RGUI_4273 Phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RGUI_4095 Anaerobic dimethyl sulfoxide reductase chain A K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D RGUI_4093 Anaerobic dimethyl sulfoxide reductase chain B K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D RGUI_4092 Anaerobic dimethyl sulfoxide reductase chain C K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D RGUI_3428 sulfur oxidation protein SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RGUI_3425 Sulfur oxidation protein SoxX K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RGUI_3426 Sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RGUI_0952 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RGUI_0961 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RGUI_3427 Sulfur oxidation protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RGUI_3429 Sulfur oxidation protein SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D RGUI_3430 Sulfur oxidation molybdopterin C protein K17225 soxC; sulfane dehydrogenase subunit SoxC
D RGUI_3431 Sulfite dehydrogenase cytochrome subunit SoxD K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D RGUI_3826 Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RGUI_4274 Sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RGUI_2941 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RGUI_0474 NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RGUI_3252 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D RGUI_0082 Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RGUI_1033 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_3349 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_1059 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_1100 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_3143 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGUI_1021 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGUI_0126 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RGUI_1185 O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGUI_4324 Selenium-binding protein 1 K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D RGUI_0924 3-methylmercaptopropionyl-CoA ligase (DmdB) K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RGUI_0913 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RGUI_2089 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rhc00061]
D RGUI_3141 Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGUI_2571 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2573 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_3650 Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGUI_2572 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_3649 Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGUI_2162 Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGUI_0325 Acyl carrier protein K02078 acpP; acyl carrier protein
D RGUI_0258 Acyl carrier protein K02078 acpP; acyl carrier protein
D RGUI_0327 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGUI_0751 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGUI_0559 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RGUI_0323 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGUI_0326 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0499 Sorbitol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_1145 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0558 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RGUI_0158 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGUI_0560 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1490 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_2002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1777 1-acyl-sn-glycerol-3-phosphate acyltransferase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_2311 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rhc00071]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_0224 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGUI_1838 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGUI_1777 1-acyl-sn-glycerol-3-phosphate acyltransferase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_2311 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_3980 2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D RGUI_2695 Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:rhc00121]
D RGUI_3217 7-alpha-hydroxysteroid dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rhc00561]
D RGUI_2019 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3072 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D RGUI_3008 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGUI_0750 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGUI_2077 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGUI_3140 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGUI_4247 putative lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D RGUI_0249 Nucleoside-diphosphate-sugar epimerase K06118 SQD1; UDP-sulfoquinovose synthase [EC:3.13.1.1]
C 00564 Glycerophospholipid metabolism [PATH:rhc00564]
D RGUI_2400 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RGUI_2427 Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RGUI_3007 Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RGUI_2077 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGUI_3140 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGUI_1925 Lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D RGUI_2146 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGUI_2203 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGUI_3309 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGUI_3980 2-acylglycerophosphoethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D RGUI_0152 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D RGUI_2991 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGUI_2990 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RGUI_2109 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RGUI_4020 Phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RGUI_1289 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rhc01040]
D RGUI_2033 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGUI_3755 cytosolic long-chain acyl-CoA thioester hydrolase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rhc00230]
D RGUI_1022 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGUI_0929 Phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_1407 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGUI_1850 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGUI_1198 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RGUI_3481 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGUI_4081 Phosphoribosylformylglycinamidine synthase, synthetase subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D RGUI_3475 Phosphoribosylformylglycinamidine synthase, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D RGUI_3477 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RGUI_3480 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RGUI_2137 Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RGUI_2135 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RGUI_2136 Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RGUI_3474 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RGUI_0340 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGUI_2326 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGUI_4356 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGUI_2912 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGUI_0726 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGUI_1853 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGUI_0612 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGUI_4027 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGUI_4023 Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D RGUI_3531 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGUI_1501 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGUI_2469 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RGUI_1492 Xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D RGUI_3415 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D RGUI_3416 Xanthine dehydrogenase, molybdenum binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D RGUI_0131 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGUI_4039 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGUI_0295 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGUI_1486 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGUI_1600 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGUI_0764 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RGUI_2436 putative hydrolases of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RGUI_2875 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGUI_0333 Metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGUI_1736 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RGUI_3658 Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RGUI_1221 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGUI_2796 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGUI_0928 Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D RGUI_2670 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D RGUI_2688 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D RGUI_1254 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RGUI_3791 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RGUI_1363 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGUI_1522 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RGUI_1698 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RGUI_0886 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RGUI_0900 hypothetical protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D RGUI_2130 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RGUI_3391 Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RGUI_1333 Hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D RGUI_3392 Uricase K16842 hpxB; allantoinase [EC:3.5.2.5]
D RGUI_3394 Ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D RGUI_3395 Ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D RGUI_3409 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGUI_3406 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGUI_3404 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:rhc00240]
D RGUI_3996 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGUI_1150 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGUI_2080 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGUI_2078 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGUI_1841 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGUI_0724 Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RGUI_1842 Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RGUI_3174 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RGUI_0149 Uridine monophosphate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RGUI_1501 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGUI_1522 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RGUI_1133 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RGUI_2459 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RGUI_1226 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RGUI_0547 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RGUI_0726 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGUI_1853 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGUI_0927 Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGUI_1254 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D RGUI_3791 Ser/Thr protein phosphatase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D RGUI_0278 Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D RGUI_0931 Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D RGUI_4348 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RGUI_0754 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RGUI_1486 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGUI_1600 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGUI_2436 putative hydrolases of HD superfamily K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D RGUI_3776 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RGUI_1625 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGUI_0930 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D RGUI_3727 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D RGUI_3358 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RGUI_0790 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RGUI_0789 Dihydropyrimidine dehydrogenase [NADP+] K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RGUI_0786 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGUI_0787 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rhc00250]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_4288 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGUI_1873 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RGUI_0483 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGUI_1762 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2048 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_1434 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RGUI_2491 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGUI_2097 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGUI_1221 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGUI_2796 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGUI_0340 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGUI_2080 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_3802 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K16871 POP2; 4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]
D RGUI_1120 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGUI_2292 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGUI_2294 Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGUI_2297 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGUI_2606 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3996 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGUI_1150 Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGUI_3477 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RGUI_0450 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGUI_1850 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rhc00260]
D RGUI_3637 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_2923 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_3326 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGUI_3381 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGUI_3262 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RGUI_1406 Low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D RGUI_0462 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3737 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_1762 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2048 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2953 D-3-phosphoglycerate dehydrogenase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D RGUI_2019 D-glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGUI_1597 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGUI_3114 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D RGUI_1927 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2195 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2196 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGUI_3025 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RGUI_0382 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RGUI_1802 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGUI_1800 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1276 hypothetical protein K02437 gcvH; glycine cleavage system H protein
D RGUI_1801 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D RGUI_0492 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RGUI_2991 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGUI_0468 Phenylpropionate dioxygenase K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D RGUI_0467 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D RGUI_1551 Sarcosine oxidase alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RGUI_0464 Sarcosine oxidase alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D RGUI_0466 Sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RGUI_1554 Sarcosine oxidase beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D RGUI_0463 Sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D RGUI_1550 Sarcosine oxidase gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D RGUI_1552 Sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D RGUI_0465 Sarcosine oxidase delta subunit K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D RGUI_2989 SAM-dependent methyltransferase K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157]
D RGUI_0461 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGUI_0932 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_0717 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_2492 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_1468 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGUI_0540 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGUI_2433 Tryptophan synthase beta chain like K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGUI_3639 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RGUI_3640 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D RGUI_3638 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D RGUI_3313 Peptidase M24 K15783 doeA; ectoine hydrolase [EC:3.5.4.44]
D RGUI_3314 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K15785 doeD; L-2,4-diaminobutyrate transaminase [EC:2.6.1.76]
D RGUI_1061 Aldehyde dehydrogenase B K15786 doeC; aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
C 00270 Cysteine and methionine metabolism [PATH:rhc00270]
D RGUI_1059 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_1100 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_3143 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGUI_1021 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D RGUI_1246 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activity K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGUI_3471 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3654 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_1446 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_0550 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGUI_0992 S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RGUI_0995 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGUI_0606 Autoinducer synthesis protein raiI K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D RGUI_2915 5'-methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D RGUI_4027 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGUI_3517 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGUI_2376 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D RGUI_1072 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGUI_2434 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGUI_3637 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_2923 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_3326 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGUI_3381 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGUI_0126 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D RGUI_3759 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D RGUI_1185 O-acetylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGUI_2684 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0591 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_2074 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGUI_1630 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_1033 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_3349 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_0625 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGUI_2479 pyridoxal phosphate-dependent deaminase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25]
D RGUI_0461 L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D RGUI_1927 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2195 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2196 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rhc00280]
D RGUI_2684 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0591 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0445 Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_1748 Propionyl-CoA carboxylase biotin-containing subunit K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
D RGUI_1754 Propionyl-CoA carboxylase carboxyl transferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D RGUI_4005 Methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D RGUI_1744 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGUI_3906 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RGUI_0263 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RGUI_3912 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3229 Acetoacetyl-CoA synthetase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RGUI_2340 Acetoacetyl-CoA synthetase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-]
D RGUI_1267 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_0439 Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RGUI_0443 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RGUI_0436 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RGUI_0437 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGUI_3256 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGUI_3254 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rhc00290]
D RGUI_0932 Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_0717 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_2492 Threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGUI_3109 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGUI_3107 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGUI_3104 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RGUI_3851 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_0196 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_2862 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_3850 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGUI_3375 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGUI_2166 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGUI_2301 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGUI_2684 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0591 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_2945 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGUI_0732 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:rhc00300]
D RGUI_3381 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGUI_3637 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_2923 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_3326 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGUI_1320 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGUI_3761 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGUI_2332 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RGUI_2143 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RGUI_4035 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGUI_1945 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGUI_3719 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGUI_2655 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGUI_2095 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGUI_4283 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGUI_1908 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGUI_1907 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:rhc00310]
D RGUI_0630 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_0631 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1838 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_1120 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGUI_3280 L-carnitine dehydratase/bile acid-inducible protein F K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D RGUI_3628 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_3629 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_3148 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rhc00220]
D RGUI_4036 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RGUI_2491 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGUI_2097 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGUI_3409 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGUI_3406 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGUI_3404 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RGUI_3477 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_2297 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_2522 Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RGUI_1340 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RGUI_4087 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RGUI_4035 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGUI_3312 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D RGUI_3462 Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rhc00330]
D RGUI_4348 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D RGUI_0492 Creatinase K08688 E3.5.3.3; creatinase [EC:3.5.3.3]
D RGUI_1521 Agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D RGUI_1999 Glutamine amidotransferase chain of NAD synthetase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D RGUI_1901 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RGUI_0995 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGUI_0992 S-adenosylmethionine decarboxylase proenzyme, prokaryotic class 1B K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D RGUI_4285 Omega-amino acid--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4104 Aspartyl-tRNA(Asn) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGUI_3805 Oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D RGUI_0218 Sarcosine oxidase alpha subunit K24954 ooxA; octopine oxidase subunit A
D RGUI_0216 Glycine/D-amino acid oxidase (deaminating) K24955 ooxB; octopine oxidase subunit B
D RGUI_4033 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RGUI_2606 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGUI_1012 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGUI_1011 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RGUI_2514 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3148 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:rhc00340]
D RGUI_1603 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RGUI_1604 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RGUI_3764 Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RGUI_0169 Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RGUI_3766 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RGUI_3751 Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RGUI_3765 Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RGUI_3752 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1126 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RGUI_1151 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:rhc00350]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGUI_0736 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_3512 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D RGUI_1120 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGUI_4072 Histidine ammonia-lyase K10774 E4.3.1.23; tyrosine ammonia-lyase [EC:4.3.1.23]
D RGUI_1297 Fumarylacetoacetate hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:rhc00360]
D RGUI_0736 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGUI_3881 Phenylacetate-coenzyme A ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D RGUI_3882 Phenylacetic acid degradation protein PaaD, thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D RGUI_0408 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D RGUI_2899 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGUI_0198 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RGUI_3148 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGUI_2725 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RGUI_4104 Aspartyl-tRNA(Asn) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGUI_2695 Ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D RGUI_2337 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
C 00380 Tryptophan metabolism [PATH:rhc00380]
D RGUI_0502 putative esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGUI_3452 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D RGUI_0630 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_0631 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1838 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_0736 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4104 Aspartyl-tRNA(Asn) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGUI_2725 Catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rhc00400]
D RGUI_0298 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGUI_0983 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RGUI_2909 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RGUI_2714 Quinate/shikimate 5-dehydrogenase I delta K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D RGUI_2458 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RGUI_0984 Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RGUI_0548 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RGUI_2667 Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RGUI_1494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGUI_0397 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGUI_0398 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RGUI_1672 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGUI_0542 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGUI_0400 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RGUI_1468 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGUI_0540 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGUI_2433 Tryptophan synthase beta chain like K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGUI_2966 Chorismate mutase I K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D RGUI_1421 Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RGUI_1258 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rhc00410]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_0489 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGUI_0790 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RGUI_0789 Dihydropyrimidine dehydrogenase [NADP+] K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RGUI_0786 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGUI_0787 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGUI_1267 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_3912 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:rhc00430]
D RGUI_4314 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_4315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_2372 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_0795 Taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RGUI_1434 Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D RGUI_0799 Sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D RGUI_3627 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:rhc00440]
D RGUI_0659 Phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D RGUI_0660 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D RGUI_0637 PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D RGUI_0635 PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D RGUI_0636 PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D RGUI_0640 Phosphonates transport ATP-binding protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D RGUI_3442 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RGUI_3444 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RGUI_0642 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RGUI_0655 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RGUI_0657 Metal-dependent hydrolase involved in phosphonate metabolism K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D RGUI_0638 PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D RGUI_3773 Metal-dependent hydrolases of the beta-lactamase superfamily I K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rhc00450]
D RGUI_1246 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activity K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGUI_3471 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3654 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_1446 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3552 Cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RGUI_2129 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGUI_2130 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RGUI_3230 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGUI_3123 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rhc00460]
D RGUI_4300 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D RGUI_4314 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_4315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_2372 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_0483 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGUI_0462 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3737 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rhc00470]
D RGUI_1844 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGUI_3148 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGUI_1892 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGUI_3477 Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D RGUI_4086 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGUI_1902 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGUI_3022 Protein often near L-alanine-DL-glutamate epimerase (cell wall recycling) K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D RGUI_3146 Protein often near L-alanine-DL-glutamate epimerase (cell wall recycling) K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D RGUI_3021 Muconate cycloisomerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RGUI_3147 L-alanine-DL-glutamate epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D RGUI_1873 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D RGUI_2655 Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGUI_2095 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGUI_4283 Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGUI_0876 Oxidoreductase, FAD-binding K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D RGUI_2119 Ketoglutarate semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D RGUI_0198 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:rhc00480]
D RGUI_4314 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_4315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_2372 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_1418 Cation transport protein chaC K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D RGUI_2570 Lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RGUI_3266 Allophanate hydrolase 2 subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RGUI_3267 Allophanate hydrolase 2 subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D RGUI_3910 Carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D RGUI_2074 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGUI_1630 Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGUI_1508 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGUI_3330 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGUI_3447 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGUI_3393 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_0915 Maleylacetoacetate isomerase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_0438 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_2289 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_3291 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_2659 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_1210 Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RGUI_3540 Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGUI_2208 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGUI_2926 Glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RGUI_2694 Antioxidant, AhpC/Tsa family K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RGUI_1901 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RGUI_0995 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:rhc00540]
D RGUI_0159 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGUI_1885 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGUI_0257 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGUI_0160 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGUI_0161 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGUI_3281 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGUI_2982 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGUI_2568 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGUI_2723 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGUI_2560 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGUI_0933 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGUI_3282 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGUI_0343 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rhc00541]
D RGUI_2561 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGUI_0247 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGUI_3220 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGUI_3623 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGUI_4212 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGUI_4220 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGUI_4222 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RGUI_4229 Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGUI_2685 Phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D RGUI_0449 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:rhc00550]
D RGUI_1101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1124 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1893 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_1098 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_1897 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGUI_1902 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGUI_1908 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGUI_1892 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGUI_1907 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGUI_0151 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGUI_2295 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGUI_1906 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGUI_1898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGUI_2290 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGUI_1547 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGUI_2951 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGUI_1909 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGUI_3777 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGUI_3988 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:rhc00552]
D RGUI_2295 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGUI_4234 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rhc00543]
D RGUI_1059 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_1100 Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGUI_2722 Undecaprenyl-phosphate galactosephosphotransferase K16566 exoY; exopolysaccharide production protein ExoY
D RGUI_2279 Undecaprenyl-phosphate galactosephosphotransferase K16566 exoY; exopolysaccharide production protein ExoY
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rhc00730]
D RGUI_0936 Hydroxymethylpyrimidine phosphate kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RGUI_3545 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGUI_1251 Oxidoreductase, FAD-binding K03153 thiO; glycine oxidase [EC:1.4.3.19]
D RGUI_2678 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGUI_1953 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGUI_0934 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGUI_0935 Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RGUI_1005 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RGUI_1218 Thiamin pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D RGUI_1363 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rhc00740]
D RGUI_1828 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RGUI_3742 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGUI_1930 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGUI_3743 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RGUI_3739 Riboflavin synthase eubacterial/eukaryotic K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RGUI_1404 Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RGUI_2964 Cobalamin biosynthesis protein BluB K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D RGUI_0934 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D RGUI_1022 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rhc00750]
D RGUI_1489 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RGUI_0573 Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D RGUI_2196 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGUI_1513 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RGUI_2877 Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RGUI_3262 Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rhc00760]
D RGUI_4288 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGUI_4289 Quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RGUI_4286 Quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RGUI_2689 Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D RGUI_0612 Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D RGUI_0726 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D RGUI_1853 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGUI_3987 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RGUI_1522 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RGUI_1255 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D RGUI_1775 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D RGUI_4021 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RGUI_2690 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D RGUI_4042 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RGUI_3738 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RGUI_3454 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGUI_3455 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RGUI_1120 Aldehyde dehydrogenase B K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rhc00770]
D RGUI_3851 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_0196 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_2862 Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGUI_3850 Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGUI_3375 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGUI_2166 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGUI_2301 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGUI_0490 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RGUI_3001 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D RGUI_0489 Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGUI_0416 Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RGUI_1626 Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RGUI_1522 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D RGUI_3914 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RGUI_2457 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RGUI_2880 Holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RGUI_2684 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0591 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0790 Pyridine nucleotide-disulfide oxidoreductase associated with reductive pyrimidine catabolism K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D RGUI_0789 Dihydropyrimidine dehydrogenase [NADP+] K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D RGUI_0786 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGUI_0787 Beta-ureidopropionase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rhc00780]
D RGUI_0559 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RGUI_0323 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGUI_0326 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0499 Sorbitol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_1145 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0158 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGUI_0560 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1490 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_2002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1272 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RGUI_0417 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rhc00785]
D RGUI_1147 Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RGUI_0139 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RGUI_1290 hypothetical protein K09711 lipS1; lipoyl synthase
D RGUI_1288 Radical SAM domain protein K24689 lipS2; lipoyl synthase
D RGUI_1287 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RGUI_1564 Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_1540 Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D RGUI_1542 Pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D RGUI_1543 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGUI_0629 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGUI_0630 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_0631 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGUI_1802 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D RGUI_1800 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGUI_1276 hypothetical protein K02437 gcvH; glycine cleavage system H protein
D RGUI_1801 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rhc00790]
D RGUI_1184 GTP cyclohydrolase I type 2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RGUI_3160 secreted alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGUI_1176 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RGUI_2873 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RGUI_1175 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RGUI_2161 Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RGUI_1828 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RGUI_3742 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGUI_2147 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGUI_1595 Ribosomal protein S6 glutaminyl transferase K15740 mptN; tetrahydromethanopterin:alpha-L-glutamate ligase [EC:6.3.2.33]
D RGUI_0590 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGUI_0401 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGUI_2107 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGUI_2083 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGUI_0402 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGUI_3699 Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGUI_1834 Molybdopterin biosynthesis protein MoeA K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D RGUI_3702 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rhc00670]
D RGUI_1651 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D RGUI_1649 Methylenetetrahydrofolate dehydrogenase (NADP+) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGUI_0462 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3737 Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGUI_3481 Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGUI_2326 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGUI_1249 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGUI_1800 Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D RGUI_3471 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3654 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_1446 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3358 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D RGUI_1639 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGUI_0453 Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGUI_3655 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGUI_1164 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGUI_3792 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rhc00860]
D RGUI_0382 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RGUI_0405 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0567 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0265 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGUI_2031 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RGUI_2425 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D RGUI_2030 Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RGUI_2028 Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RGUI_1310 Coproporphyrinogen III oxidase, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RGUI_2460 Protoporphyrinogen IX oxidase, HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RGUI_2507 Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RGUI_2234 Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RGUI_4276 Siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D RGUI_1456 Uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGUI_1003 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGUI_1449 Cobalt-precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D RGUI_1450 Cobalt-precorrin-3b C17-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D RGUI_1454 Cobalt-precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D RGUI_1453 Cobalamin biosynthesis protein CobE K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D RGUI_1457 Precorrin-6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D RGUI_1451 Cobalt-precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D RGUI_1452 Cobalt-precorrin-6y C5-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D RGUI_1448 Cobalt-precorrin-8x methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D RGUI_1455 Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D RGUI_4259 CobN component of cobalt chelatase involved in B12 biosynthesis K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D RGUI_1871 Aerobic cobaltochelatase CobS subunit K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D RGUI_1874 Aerobic cobaltochelatase CobT subunit K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D RGUI_2903 ATP:Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGUI_4250 Cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGUI_0575 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGUI_1459 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGUI_1460 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D RGUI_1464 Adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RGUI_1465 L-threonine 3-O-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D RGUI_2347 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D RGUI_2349 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D RGUI_2348 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D RGUI_2350 Alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D RGUI_1984 Protoporphyrin IX Mg-chelatase subunit H K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1]
D RGUI_1972 Protoporphyrin IX Mg-chelatase subunit D K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D RGUI_1971 Protoporphyrin IX Mg-chelatase subunit I K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D RGUI_3999 Mg-protoporphyrin IX monomethyl ester oxidative cyclase (anaerobic) K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3]
D RGUI_1977 Mg protoporphyrin IX monomethyl ester oxidative cyclase (aerobic) K04035 E1.14.13.81; magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]
D RGUI_2175 Divinyl protochlorophyllide a 8-vinyl-reductase K19073 DVR; divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]
D RGUI_4000 Protein BchJ, involved in reduction of C-8 vinyl of divinyl protochlorophyllide K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-]
D RGUI_1983 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7]
D RGUI_1986 Light-independent protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7]
D RGUI_1985 Light-independent protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7]
D RGUI_1990 Chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
D RGUI_1961 Chlorophyllide reductase subunit BchX K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15]
D RGUI_1960 Chlorophyllide reductase subunit BchY K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15]
D RGUI_1959 Chlorophyllide reductase subunit BchZ K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15]
D RGUI_1987 2-vinyl bacteriochlorophyllide hydratase BchF K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165]
D RGUI_1962 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase BchC K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396]
D RGUI_1992 Geranylgeranyl hydrogenase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
D RGUI_4026 heme iron utilization protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D RGUI_2586 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rhc00130]
D RGUI_2104 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGUI_2513 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RGUI_3376 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RGUI_2363 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RGUI_2243 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rhc00900]
D RGUI_2678 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGUI_1953 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGUI_0153 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RGUI_4019 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D RGUI_1442 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RGUI_0380 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RGUI_2870 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_1993 Isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D RGUI_2679 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGUI_1964 Octaprenyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGUI_3136 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGUI_0151 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGUI_1992 Geranylgeranyl hydrogenase BchP K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rhc00906]
D RGUI_1968 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGUI_0731 Phytoene/squalene synthetase-like protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGUI_1969 Phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D RGUI_1966 Hydroxyneurosporene dehydrogenase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131]
D RGUI_1965 Methoxyneurosporene dehydrogenase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27]
D RGUI_1963 Hydroxyneurosporene methyltransferase K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210]
D RGUI_1970 Spheroidene monooxygenase K09847 crtA; spheroidene monooxygenase [EC:1.14.15.9]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rhc00907]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_0437 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RGUI_3498 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3957 Transketolase, C-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGUI_3958 Transketolase, N-terminal section K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rhc00523]
D RGUI_4212 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGUI_4220 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGUI_4222 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:rhc01054]
D RGUI_1873 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D RGUI_1650 Isochorismate pyruvate-lyase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rhc00946]
D RGUI_4300 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RGUI_1295 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGUI_0262 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:rhc00332]
D RGUI_1012 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGUI_1011 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:rhc00261]
D RGUI_2130 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D RGUI_3637 Aspartokinase associated with ectoine biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_2923 Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGUI_3326 Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGUI_1320 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGUI_3761 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGUI_2332 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rhc00521]
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D RGUI_1793 Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D RGUI_3698 Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGUI_3284 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGUI_4212 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGUI_4220 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGUI_4222 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D RGUI_3518 Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
D RGUI_4212 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00401 Novobiocin biosynthesis [PATH:rhc00401]
D RGUI_1421 Cyclohexadienyl dehydrogenase K00220 tyrC; cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RGUI_1494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGUI_0397 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RGUI_0327 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGUI_0326 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0499 Sorbitol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_1145 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0560 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1490 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_2002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RGUI_0325 Acyl carrier protein K02078 acpP; acyl carrier protein
D RGUI_0258 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rhc00999]
D RGUI_0550 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGUI_2458 Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RGUI_4300 Beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rhc00362]
D RGUI_0197 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RGUI_0719 Beta-ketoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D RGUI_0423 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGUI_3075 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGUI_2838 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGUI_1119 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGUI_3929 Demethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGUI_0224 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGUI_1051 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGUI_1052 Methylcrotonyl-CoA carboxylase biotin-containing subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGUI_1053 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RGUI_1838 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D RGUI_2899 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rhc00627]
D RGUI_4104 Aspartyl-tRNA(Asn) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGUI_3628 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_3629 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
D RGUI_0197 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rhc00625]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGUI_0497 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2379 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_3724 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_4280 Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D RGUI_2361 Nitrogenase (molybdenum-iron) beta chain K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D RGUI_2359 Nitrogenase (molybdenum-iron) reductase and maturation protein NifH K02588 nifH; nitrogenase iron protein NifH
D RGUI_2360 Nitrogenase (molybdenum-iron) alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D RGUI_2633 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGUI_2701 putative epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D RGUI_2157 Hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RGUI_0715 Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rhc00361]
D RGUI_0197 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D RGUI_2157 Hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RGUI_0715 Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D RGUI_2701 putative epoxide hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:rhc00623]
D RGUI_0197 Muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D RGUI_2538 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGUI_0678 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGUI_2537 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGUI_0680 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGUI_2535 Uptake hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RGUI_2534 Uptake hydrogenase small subunit precursor K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:rhc00643]
D RGUI_4104 Aspartyl-tRNA(Asn) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:rhc00791]
D RGUI_3084 Amidases related to nicotinamidase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D RGUI_3409 Urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGUI_3406 Urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGUI_3404 Urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:rhc00930]
D RGUI_0920 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:rhc00626]
D RGUI_0958 S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rhc03020]
D RGUI_2938 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGUI_2939 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGUI_1359 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGUI_2874 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rhc03010]
D RGUI_0545 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RGUI_0280 SSU ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2
D RGUI_1379 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RGUI_2116 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D RGUI_1368 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RGUI_0330 SSU ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6
D RGUI_1389 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RGUI_1371 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RGUI_0989 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RGUI_1386 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RGUI_1360 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RGUI_1390 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RGUI_1361 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RGUI_1372 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D RGUI_2697 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D RGUI_2965 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RGUI_1376 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RGUI_0331 SSU ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18
D RGUI_1381 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RGUI_2240 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RGUI_1430 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RGUI_2933 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RGUI_1382 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RGUI_1385 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RGUI_1384 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RGUI_1373 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RGUI_1370 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RGUI_2936 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGUI_0332 LSU ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D RGUI_2935 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D RGUI_2932 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RGUI_0990 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RGUI_1375 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RGUI_1365 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RGUI_1378 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RGUI_1358 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RGUI_1369 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RGUI_2960 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RGUI_3155 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RGUI_1017 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RGUI_1380 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RGUI_1383 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RGUI_1374 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RGUI_0533 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RGUI_1016 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RGUI_4040 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RGUI_1377 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D RGUI_1367 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RGUI_2959 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RGUI_0749 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D RGUI_1647 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RGUI_2787 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RGUI_3154 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RGUI_2387 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RGUI_4138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4168 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4159 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4169 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rhc00970]
D RGUI_4136 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4148 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4174 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4157 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4167 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4162 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4161 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4132 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4176 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4153 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4139 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGUI_4130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGUI_4131 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGUI_4152 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGUI_4173 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGUI_4147 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGUI_4180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4171 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4181 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4177 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4179 tRNA-His K14226 tRNA-His; tRNA His
D RGUI_4137 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4156 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4166 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4129 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4178 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4145 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4149 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4154 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGUI_4175 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4160 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4170 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4172 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4143 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGUI_4146 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4164 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4133 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4183 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4182 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4141 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4126 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4151 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4128 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4142 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4163 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGUI_4140 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_4144 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_4150 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_0405 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0567 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_1642 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGUI_2364 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGUI_1863 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGUI_1641 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGUI_3535 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGUI_4001 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGUI_1180 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGUI_1179 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGUI_1172 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGUI_0362 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGUI_0733 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGUI_3123 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGUI_1249 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGUI_1166 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGUI_3294 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGUI_1789 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGUI_3367 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RGUI_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGUI_1732 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGUI_1605 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGUI_3157 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGUI_1445 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGUI_1534 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGUI_1637 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rhc03060]
D RGUI_1364 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RGUI_2930 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGUI_1225 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGUI_0356 Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D RGUI_0355 Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D RGUI_0357 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RGUI_2791 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGUI_2524 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGUI_2455 Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D RGUI_2970 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGUI_1193 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGUI_1867 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGUI_1868 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGUI_1869 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGUI_2881 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGUI_2325 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rhc04122]
D RGUI_3545 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGUI_1033 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_3349 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D RGUI_1274 Molybdopterin biosynthesis protein MoeB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGUI_0162 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGUI_2107 Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGUI_0590 Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGUI_2108 Molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein
D RGUI_0401 Molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGUI_2083 Molybdenum cofactor biosynthesis protein MoaB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rhc03018]
D RGUI_3117 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGUI_1048 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGUI_2383 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGUI_4320 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGUI_1944 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGUI_0711 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGUI_2346 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGUI_2461 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGUI_0415 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RGUI_2557 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGUI_1397 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGUI_4011 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RGUI_1735 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGUI_0586 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGUI_0123 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGUI_2498 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rhc03030]
D RGUI_4344 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_3969 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_2456 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_1607 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGUI_1317 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGUI_3775 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGUI_3292 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGUI_1506 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGUI_2238 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGUI_1843 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGUI_1939 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_2866 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGUI_3272 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rhc03410]
D RGUI_1671 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGUI_3277 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGUI_2242 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGUI_0905 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGUI_2081 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGUI_0771 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGUI_1824 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_1725 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rhc03420]
D RGUI_0267 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGUI_3902 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RGUI_0701 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RGUI_2110 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RGUI_1915 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rhc03430]
D RGUI_2473 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGUI_2321 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RGUI_1915 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGUI_1196 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGUI_2680 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGUI_1725 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_1607 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGUI_2238 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGUI_1317 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGUI_3292 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGUI_3775 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGUI_4344 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_3969 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_2456 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_1506 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rhc03440]
D RGUI_1725 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_2237 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RGUI_2887 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGUI_1315 Recombination protein RecR K06187 recR; recombination protein RecR
D RGUI_3534 RecA protein K03553 recA; recombination protein RecA
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_1667 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGUI_1666 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGUI_1668 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGUI_0166 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGUI_1607 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGUI_2238 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGUI_1317 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGUI_3292 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGUI_3775 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGUI_4344 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_3969 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_2456 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_1506 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGUI_1783 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rhc02010]
D RGUI_0707 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RGUI_0709 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D RGUI_0708 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RGUI_2226 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGUI_2227 Alkanesulfonates transport system permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RGUI_2228 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGUI_0796 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGUI_0798 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RGUI_0797 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGUI_0937 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RGUI_0939 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RGUI_0938 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RGUI_3868 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RGUI_3869 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RGUI_3870 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGUI_1523 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGUI_0227 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D RGUI_1865 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGUI_2665 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D RGUI_2664 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D RGUI_2663 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RGUI_4352 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGUI_1031 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGUI_4350 ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein
D RGUI_0119 Spermidine Putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RGUI_4351 ABC transporter permease protein K11071 potB; spermidine/putrescine transport system permease protein
D RGUI_0118 Spermidine Putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RGUI_0120 Putrescine transport ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGUI_4349 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGUI_0090 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_2405 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_1702 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_0978 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_0093 Various polyols ABC transporter, periplasmic substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RGUI_0092 Various polyols ABC transporter, permease component 1 K10228 smoF; polyol transport system permease protein
D RGUI_0091 Various polyols ABC transporter, permease component 2 K10229 smoG; polyol transport system permease protein
D RGUI_4301 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RGUI_4302 ABC alpha-glucoside transporter, inner membrane subunit AglF K10233 aglF; alpha-glucoside transport system permease protein
D RGUI_4303 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D RGUI_4305 Alpha-glucoside transport ATP-binding protein AglK K10235 aglK; alpha-glucoside transport system ATP-binding protein
D RGUI_2152 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RGUI_3646 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGUI_1845 ABC-type transport system permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGUI_1846 Histidine ABC transporter, ATP-binding protein HisP K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGUI_0596 putative nucleoside ABC transporter, substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D RGUI_1614 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGUI_0600 putative nucleoside ABC transporter, permease 1 component K23535 nupB; general nucleoside transport system permease protein
D RGUI_1612 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RGUI_1613 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RGUI_0601 putative nucleoside ABC transporter, permease 2 component K23536 nupC; general nucleoside transport system permease protein
D RGUI_1611 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_0598 putative nucleoside ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_0599 putative nucleoside ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_0981 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RGUI_0980 ABC-type sugar transport system, permease component K17316 gtsB; glucose/mannose transport system permease protein
D RGUI_0979 ABC-type sugar transport system, permease component K17317 gtsC; glucose/mannose transport system permease protein
D RGUI_2676 Fructose ABC transporter, substrate-binding component FrcB K10552 frcB; fructose transport system substrate-binding protein
D RGUI_2675 Fructose ABC transporter, permease component FrcC K10553 frcC; fructose transport system permease protein
D RGUI_2674 Fructose ABC transporter, ATP-binding component FrcA K10554 frcA; fructose transport system ATP-binding protein
D RGUI_2198 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D RGUI_2199 ABC transporter, membrane spanning protein K17238 inoF; inositol-phosphate transport system permease protein
D RGUI_2200 ABC transporter, membrane spanning protein K17239 inoG; inositol-phosphate transport system permease protein
D RGUI_2201 Sugar ABC transporter, ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D RGUI_3838 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGUI_0879 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGUI_3839 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGUI_0880 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGUI_3840 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGUI_0881 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGUI_3841 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGUI_0882 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGUI_0290 Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGUI_0289 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D RGUI_0288 Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D RGUI_0287 Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGUI_2647 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_0649 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_0651 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_2645 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RGUI_2646 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RGUI_0646 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RGUI_0647 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RGUI_0653 Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D RGUI_2648 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_0650 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_0652 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_1347 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RGUI_1346 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztB K09970 aapQ; general L-amino acid transport system permease protein
D RGUI_1345 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztC K09971 aapM; general L-amino acid transport system permease protein
D RGUI_1343 Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RGUI_0791 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3012 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3884 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0576 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_2305 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0301 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0239 Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0792 Branched-chain amino acid transport system permease protein LivM K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3013 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3885 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0577 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_2308 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0305 High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0238 putative ABC transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0306 Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3014 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3886 putative ABC-transporter permease component K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0578 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_2306 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0793 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3015 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3887 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0579 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_2309 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0236 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0302 Branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0794 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0235 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0303 Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3016 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3888 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0580 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_2304 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3401 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RGUI_3400 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RGUI_3399 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RGUI_3398 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGUI_3397 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RGUI_1314 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RGUI_3315 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RGUI_1313 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D RGUI_1312 Oligopeptide/dipeptide uptake family ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D RGUI_1311 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D RGUI_2039 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RGUI_2036 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D RGUI_2037 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RGUI_4252 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D RGUI_4254 Transmembrane component NikQ of energizing module of nickel ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D RGUI_4255 ATPase component NikO of energizing module of nickel ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RGUI_4251 Additional periplasmic component NikK of nickel ECF transporter K10094 cbiK; nickel transport protein
D RGUI_4253 Substrate-specific component NikM of nickel ECF transporter K16915 cbiL; nickel transport protein
D RGUI_1458 Substrate-specific component NikM of nickel ECF transporter K16915 cbiL; nickel transport protein
D RGUI_0338 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D RGUI_2993 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RGUI_2995 Structural protein K09688 kpsM; capsular polysaccharide transport system permease protein
D RGUI_2992 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RGUI_1730 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RGUI_1729 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGUI_0350 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D RGUI_0351 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D RGUI_0352 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RGUI_1509 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D RGUI_1510 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RGUI_2565 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGUI_3139 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGUI_3138 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGUI_0372 Lipid A export ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGUI_2500 ABC transporter, transmembrane ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGUI_2393 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_2392 putative ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_3510 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGUI_2022 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RGUI_2021 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RGUI_4267 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:rhc02060]
D RGUI_2896 Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D RGUI_2895 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGUI_2922 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RGUI_2563 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:rhc03070]
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_0356 Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D RGUI_0355 Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D RGUI_2930 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGUI_1225 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGUI_1364 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RGUI_0357 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RGUI_2791 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGUI_2524 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGUI_1193 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGUI_2455 Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D RGUI_2970 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGUI_1867 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGUI_1868 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGUI_1869 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGUI_3559 Conjugal transfer coupling protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_3185 Conjugal transfer coupling protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_2824 Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_3039 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGUI_3033 Uncharacterized protein ImpD K11903 hcp; type VI secretion system secreted protein Hcp
D RGUI_3045 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D RGUI_3052 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D RGUI_3044 Outer membrane protein ImpK/VasF, OmpA/MotB domain K11892 impK; type VI secretion system protein ImpK
D RGUI_3051 Flagellar motor rotation protein MotB K11892 impK; type VI secretion system protein ImpK
D RGUI_3038 ClpB protein K11907 vasG; type VI secretion system protein VasG
D RGUI_3042 Uncharacterized protein ImpI/VasC K11913 fha1; type VI secretion system protein
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rhc02020]
D RGUI_0291 Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGUI_0285 Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGUI_3160 secreted alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGUI_0290 Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGUI_1087 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGUI_2682 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGUI_1205 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGUI_0051 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D RGUI_0050 Cobalt-zinc-cadmium resistance protein K07787 cusA; copper/silver efflux system protein
D RGUI_2251 Flagellin protein FlaA K02406 fliC; flagellin
D RGUI_2271 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RGUI_1781 sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RGUI_2999 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_0872 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_2617 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_0873 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RGUI_2616 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RGUI_2615 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RGUI_2997 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RGUI_1003 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGUI_2239 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGUI_0973 Two-component response regulator K07671 prrA; two-component system, OmpR family, response regulator PrrA
D RGUI_0667 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RGUI_2892 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RGUI_2891 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RGUI_1356 DNA-binding HTH domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D RGUI_3248 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RGUI_3247 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RGUI_3244 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RGUI_3243 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGUI_3242 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RGUI_3241 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D RGUI_1634 [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RGUI_0336 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RGUI_3342 Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D RGUI_4017 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGUI_4016 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_4015 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGUI_4014 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGUI_2351 Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA K02584 nifA; Nif-specific regulatory protein
D RGUI_3628 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_3629 Acetyl-CoA:acetoacetyl-CoA transferase, beta subunit K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3478 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RGUI_2004 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGUI_2534 Uptake hydrogenase small subunit precursor K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D RGUI_2535 Uptake hydrogenase large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6]
D RGUI_2533 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGUI_2549 Hydrogenase transcriptional regulatory protein HoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RGUI_2537 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGUI_0680 Uptake hydrogenase small subunit precursor K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D RGUI_2538 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGUI_0678 Uptake hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D RGUI_2540 Ni,Fe-hydrogenase I cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D RGUI_2188 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_3613 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_3952 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_0220 Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_2855 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_1591 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3346 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3433 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3542 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3616 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1951 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0246 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1234 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3024 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2193 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0487 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3233 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4114 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2192 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_3612 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_2186 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3611 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_2184 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2187 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3610 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3614 Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2190 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_2191 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3617 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_1478 GGDEF domain protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RGUI_3533 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_3122 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_1010 Signal transduction histidine kinase K13588 chpT; histidine phosphotransferase ChpT
D RGUI_0164 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RGUI_2854 Two-component response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D RGUI_0229 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGUI_3303 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGUI_3304 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RGUI_0230 TRAP dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RGUI_0231 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_3305 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_2341 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_2484 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_0202 TRAP dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_3302 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGUI_2441 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGUI_2439 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D RGUI_1498 Light-harvesting LHII, beta subunit A K08939 pucB; light-harvesting protein B-800-850 beta chain
D RGUI_1955 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RGUI_1956 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RGUI_1957 Light-harvesting LHI, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RGUI_1981 Photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D RGUI_2660 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGUI_2661 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGUI_2662 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGUI_1259 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_0081 Sulfite dehydrogenase cytochrome subunit K08738 CYC; cytochrome c
D RGUI_2632 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_1975 Cytochrome c2 K08738 CYC; cytochrome c
D RGUI_3706 WD domain/cytochrome c family protein K08738 CYC; cytochrome c
D RGUI_1305 Cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGUI_1304 Cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGUI_1303 Cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGUI_1302 Cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGUI_2024 Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D RGUI_2025 Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D RGUI_2026 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_4192 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_2721 Polysaccharide export lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_1940 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_4043 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RGUI_2554 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_2636 Sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_0964 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:rhc04148]
D RGUI_1901 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D RGUI_2660 Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rhc02024]
D RGUI_4011 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RGUI_1494 Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGUI_0397 Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGUI_0298 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGUI_1356 DNA-binding HTH domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D RGUI_2826 Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D RGUI_3566 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RGUI_2827 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RGUI_3567 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D RGUI_2828 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D RGUI_3568 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RGUI_2829 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RGUI_3569 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RGUI_2830 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RGUI_3571 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D RGUI_2833 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D RGUI_2834 Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D RGUI_3574 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D RGUI_2835 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D RGUI_3575 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D RGUI_2836 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D RGUI_0606 Autoinducer synthesis protein raiI K20249 raiI; acyl homoserine lactone synthase [EC:2.3.1.184]
D RGUI_0608 Transcriptional activator protein raiR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D RGUI_1336 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_3583 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_1154 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_1334 Putrescine transport system permease protein potI K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_3586 Polyamine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_1152 ABC transporter, inner membrane subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_1335 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_3585 polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_1153 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_0456 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_1337 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_3582 Maltose/maltodextrin transport ATP-binding protein MalK K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_1155 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_0791 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3012 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3884 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0576 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_2305 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0301 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0239 Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0792 Branched-chain amino acid transport system permease protein LivM K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3013 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3885 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0577 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_2308 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0305 High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0238 putative ABC transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0306 Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3014 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3886 putative ABC-transporter permease component K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0578 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_2306 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0793 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3015 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3887 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0579 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_2309 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0236 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0302 Branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0794 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0235 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0303 Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3016 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3888 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0580 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_2304 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_4318 hypothetical protein K20276 bapA; large repetitive protein
D RGUI_1777 1-acyl-sn-glycerol-3-phosphate acyltransferase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_2311 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_3302 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGUI_2038 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RGUI_1828 3,4-dihydroxy-2-butanone 4-phosphate synthase K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D RGUI_1930 Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGUI_0863 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_2595 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_3459 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0889 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0899 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0491 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0147 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_1067 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_4099 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0665 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_2410 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_3087 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0862 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_2594 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_3458 Peptide/nickel/opine uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0892 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_3088 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0494 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0146 Oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_4100 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0664 Oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_2409 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0897 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0861 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_3457 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0893 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0898 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_3089 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0495 Peptide/opine/nickel uptake family ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0145 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_4101 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0663 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_2408 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_2593 putative oligopeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0860 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0890 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3085 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0496 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0144 Oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_4102 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0662 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_2407 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3461 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3460 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGUI_2791 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGUI_2930 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGUI_1225 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGUI_1364 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RGUI_0357 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RGUI_2524 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGUI_1193 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGUI_2455 Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D RGUI_2970 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rhc02030]
D RGUI_1591 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3346 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3433 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3542 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3616 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1951 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0246 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1234 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3024 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2193 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0487 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3233 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4114 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2186 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3611 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_2192 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_3612 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_2184 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2187 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3610 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3614 Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2190 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_2191 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3617 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3952 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_0220 Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_2855 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_3618 Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGUI_2188 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_3613 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_0342 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGUI_0245 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RGUI_2277 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGUI_2271 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RGUI_1416 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_2284 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rhc02040]
D RGUI_2259 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGUI_2275 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGUI_0342 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGUI_2255 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGUI_2246 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RGUI_2274 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RGUI_2265 hypothetical protein K02415 fliL; flagellar protein FliL
D RGUI_0245 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RGUI_2277 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGUI_2278 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGUI_2260 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGUI_2268 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGUI_2269 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGUI_2267 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGUI_2263 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGUI_2257 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGUI_2258 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGUI_2245 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGUI_2283 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGUI_2261 Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D RGUI_2262 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGUI_2264 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGUI_2280 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGUI_2248 flagellar protein FlgJ, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGUI_2282 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGUI_2281 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGUI_2251 Flagellin protein FlaA K02406 fliC; flagellin
D RGUI_2271 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RGUI_1416 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_2284 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_1938 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGUI_2004 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rhc04980]
D RGUI_2903 ATP:Cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGUI_4038 putative periplasmic protein kinase ArgK and related GTPases of G3E family K07588 MMAA; GTPase [EC:3.6.5.-]
D RGUI_1744 Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D RGUI_3471 Betaine--homocysteine S-methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_3654 Pterin-binding enzyme domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGUI_1446 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rhc01501]
D RGUI_3296 Porin K08720 ompU; outer membrane protein OmpU
D RGUI_0760 Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGUI_0101 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_4332 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_1158 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_0100 RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D RGUI_4331 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1157 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_1547 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGUI_2951 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGUI_1909 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rhc01502]
D RGUI_1892 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGUI_1844 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGUI_1907 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGUI_1906 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGUI_1898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rhc01503]
D RGUI_1058 MSHA pilin protein MshA K01406 prtC; serralysin [EC:3.4.24.40]
D RGUI_1548 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGUI_1205 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGUI_0101 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_4332 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_1158 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_0100 RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D RGUI_4331 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1157 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_0159 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGUI_0667 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rhc01000]
C 01001 Protein kinases [BR:rhc01001]
D RGUI_4341 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGUI_3054 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D RGUI_2801 Hipa protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGUI_2373 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RGUI_2715 Succinoglycan biosynthesis transport protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RGUI_4197 Exopolysaccharide biosynthesis domain protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGUI_0291 Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGUI_1087 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGUI_1781 sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RGUI_2892 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RGUI_4017 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGUI_4015 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGUI_3478 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RGUI_2533 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGUI_2186 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3611 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3533 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_3122 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_2441 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGUI_2554 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_2636 Sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_0964 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rhc01009]
D RGUI_2434 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGUI_3025 Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:rhc01002]
D RGUI_2325 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGUI_3238 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RGUI_2541 Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RGUI_0682 Hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D RGUI_0131 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGUI_4039 glutamine amidotransferase class-I K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGUI_0767 Para-aminobenzoate synthase, amidotransferase component K07010 K07010; putative glutamine amidotransferase
D RGUI_3450 glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D RGUI_1850 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGUI_2292 Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGUI_0450 Glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGUI_3258 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RGUI_2505 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RGUI_2163 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D RGUI_2164 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D RGUI_3447 Membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGUI_3119 Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D RGUI_3589 Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D RGUI_1058 MSHA pilin protein MshA K01406 prtC; serralysin [EC:3.4.24.40]
D RGUI_2322 Peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RGUI_2323 Peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D RGUI_1508 Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGUI_3330 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGUI_2411 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RGUI_1945 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGUI_3719 Acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D RGUI_3317 Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RGUI_1877 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RGUI_1002 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D RGUI_1653 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGUI_0387 putative protease htpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RGUI_0154 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RGUI_2179 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RGUI_0512 Trypsin domain protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D RGUI_1205 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGUI_3777 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGUI_3988 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGUI_3642 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGUI_0017 putative ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGUI_1136 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGUI_0403 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGUI_2881 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGUI_2514 Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGUI_3116 Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGUI_1295 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGUI_0262 Penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGUI_3696 rhomboid family serine protease K07059 K07059; rhomboid family protein
D RGUI_0318 prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RGUI_1709 Phage head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RGUI_0187 Phage head maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D RGUI_2450 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RGUI_4314 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_4315 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_2372 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D RGUI_1933 Putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D RGUI_1934 Collagenase and related protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D RGUI_3285 TldE protein, part of TldE/TldD proteolytic complex K03592 pmbA; PmbA protein
D RGUI_3261 TldD protein, part of TldE/TldD proteolytic complex K03568 tldD; TldD protein
D RGUI_1207 HflC protein K04087 hflC; modulator of FtsH protease HflC
D RGUI_1208 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:rhc01003]
D RGUI_0391 Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D RGUI_2290 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGUI_1547 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGUI_4234 N-acetylmannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D RGUI_3997 putative conserved integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D RGUI_4210 Glycosyl transferase, group 2 family protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D RGUI_0581 Glycosyltransferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rhc01005]
D RGUI_0159 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGUI_0161 Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGUI_1885 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGUI_0257 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGUI_0160 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGUI_3281 Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGUI_0343 Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGUI_0933 Lipid IVA 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGUI_3282 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGUI_2723 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGUI_2560 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGUI_2982 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGUI_2568 Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhc01011]
D RGUI_1101 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1124 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGUI_1893 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_1098 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGUI_1897 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGUI_1902 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGUI_1908 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGUI_1892 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGUI_1844 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGUI_4086 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGUI_1906 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGUI_1898 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGUI_2295 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGUI_1635 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RGUI_1547 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGUI_2951 Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGUI_1909 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGUI_3777 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGUI_3988 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGUI_2290 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGUI_3258 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RGUI_2505 ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein K16291 erfK; L,D-transpeptidase ErfK/SrfK
D RGUI_2179 Murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D RGUI_1319 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RGUI_1807 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RGUI_1943 Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RGUI_0322 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RGUI_1548 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rhc01004]
D RGUI_0327 Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGUI_0751 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGUI_0559 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D RGUI_0323 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGUI_0326 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0499 Sorbitol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_1145 Oxidoreductase, short chain dehydrogenase/reductase family K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGUI_0558 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabA form K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D RGUI_0158 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGUI_0560 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_1490 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_2002 Enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGUI_2033 Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGUI_3755 cytosolic long-chain acyl-CoA thioester hydrolase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RGUI_3976 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0589 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_0234 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGUI_1780 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGUI_1779 Acetyl-coenzyme A synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGUI_1777 1-acyl-sn-glycerol-3-phosphate acyltransferase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_2311 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_3353 Acetyl-coenzyme A synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RGUI_2210 Long-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RGUI_0750 Phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGUI_2077 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGUI_3140 Acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:rhc01008]
D RGUI_1873 Aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:rhc01006]
D RGUI_2679 Octaprenyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGUI_1964 Octaprenyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D RGUI_3136 Decaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGUI_0151 Undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGUI_1968 Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGUI_0731 Phytoene/squalene synthetase-like protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGUI_0148 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGUI_2104 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGUI_1990 Chlorophyll a synthase ChlG K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133]
C 01007 Amino acid related enzymes [BR:rhc01007]
D RGUI_3367 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RGUI_0405 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0567 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0170 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGUI_1534 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGUI_1637 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGUI_0733 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGUI_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGUI_3123 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGUI_1789 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGUI_1166 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGUI_3294 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGUI_4001 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGUI_1605 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGUI_1180 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGUI_1179 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGUI_0362 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGUI_1732 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGUI_1172 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGUI_3535 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGUI_3157 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGUI_1445 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGUI_3365 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGUI_3348 Aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D RGUI_3796 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_1422 Biosynthetic Aromatic amino acid aminotransferase beta K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGUI_0382 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D RGUI_1272 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RGUI_1246 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activity K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGUI_1267 Omega-amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D RGUI_4035 Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGUI_1117 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D RGUI_3639 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RGUI_4285 Omega-amino acid--pyruvate aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D RGUI_0795 Taurine--pyruvate aminotransferase K03851 tpa; taurine-pyruvate aminotransferase [EC:2.6.1.77]
D RGUI_3148 D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D RGUI_2684 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0591 Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGUI_0660 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D RGUI_1762 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2048 Serine--glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D RGUI_2196 Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rhc00194]
D RGUI_1408 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGUI_1409 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGUI_1410 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGUI_1411 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGUI_1412 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGUI_2978 ATP synthase B' chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGUI_2979 ATP synthase F0 sector subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGUI_2977 ATP synthase F0 sector subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGUI_2976 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGUI_2975 ATP synthase protein I K02116 atpI; ATP synthase protein I
D RGUI_1956 Photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit
D RGUI_1955 Photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit
D RGUI_1981 Photosynthetic reaction center H subunit K13991 puhA; photosynthetic reaction center H subunit
D RGUI_1954 Photosynthetic reaction center cytochrome c subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit
D RGUI_1957 Light-harvesting LHI, alpha subunit K08926 pufA; light-harvesting complex 1 alpha chain
D RGUI_1498 Light-harvesting LHII, beta subunit A K08939 pucB; light-harvesting protein B-800-850 beta chain
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rhc03000]
D RGUI_1072 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGUI_3142 Transcriptional regulator, AraC family K13652 K13652; AraC family transcriptional regulator
D RGUI_1673 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RGUI_0299 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D RGUI_3950 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D RGUI_1163 Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D RGUI_2724 Hydrogen peroxide-inducible activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RGUI_2481 Transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RGUI_3501 RuBisCO operon transcriptional regulator CbbR K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_2040 Transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_0666 Regulatory protein CysB K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_1703 Transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_0895 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_1065 Transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGUI_3006 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D RGUI_2577 Transcriptional regulator, LacI family K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D RGUI_0634 Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D RGUI_1675 Glycolate utilization operon transcriptional activator GlcC K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D RGUI_0788 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) K09017 rutR; TetR/AcrR family transcriptional regulator
D RGUI_3594 Transcriptional regulator YbiH, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D RGUI_2605 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGUI_1433 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGUI_2050 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D RGUI_1356 DNA-binding HTH domain-containing protein K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D RGUI_0608 Transcriptional activator protein raiR K25873 raiR; LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
D RGUI_3066 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D RGUI_0571 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGUI_3069 Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D RGUI_1988 PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RGUI_2000 PpaA, heme-binding SCHIC domain sensory protein, regulator for photosystem formation K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RGUI_1528 Manganese uptake regulation protein MUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGUI_2038 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D RGUI_0557 Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator
D RGUI_2049 Transcriptional regulator, IclR family K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D RGUI_3302 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGUI_1307 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGUI_3905 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGUI_3528 Carbon monoxide-responsive transcriptional activator CooA K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator
D RGUI_3544 Iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RGUI_2020 Iron-responsive repressor RirA K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D RGUI_1580 Arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RGUI_2956 Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RGUI_1996 Arsenate reductase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGUI_1756 Transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RGUI_2996 Transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D RGUI_0241 Transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D RGUI_0417 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RGUI_3364 DNA-binding protein, putative K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D RGUI_4271 Transcriptional activator of acetoin/glycerol metabolism K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RGUI_2351 Nitrogenase (molybdenum-iron)-specific transcriptional regulator NifA K02584 nifA; Nif-specific regulatory protein
D RGUI_4359 DNA-binding domain of ModE K02019 modE; molybdate transport system regulatory protein
D RGUI_2606 Proline dehydrogenase (Proline oxidase) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D RGUI_2625 Nitrous oxide reductase maturation protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D RGUI_1857 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RGUI_0025 Plasmid replication protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0035 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2735 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2804 plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2467 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4292 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0034 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4228 Plasmid replication protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0809 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_1919 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D RGUI_2471 Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RGUI_2657 Negative transcriptional regulator K07734 paiB; transcriptional regulator
D RGUI_2087 hypothetical protein K07735 algH; putative transcriptional regulator
D RGUI_0773 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RGUI_1931 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RGUI_1912 Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rhc03021]
D RGUI_1359 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGUI_2938 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGUI_2939 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGUI_2874 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGUI_1938 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGUI_2529 RNA polymerase sigma-54 factor RpoN K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGUI_1481 RNA polymerase sigma-70 factor, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGUI_1628 RNA polymerase sigma factor RpoH-related protein K03089 rpoH; RNA polymerase sigma-32 factor
D RGUI_3770 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RGUI_2004 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D RGUI_2517 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGUI_3744 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RGUI_2931 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGUI_2494 Serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D RGUI_2374 Anti-sigma F factor antagonist (spoIIAA-2) K04749 rsbV; anti-sigma B factor antagonist
D RGUI_2373 Serine-protein kinase RsbW K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D RGUI_2052 Sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D RGUI_0773 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RGUI_1439 Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RGUI_2461 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rhc03019]
D RGUI_1048 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGUI_2882 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGUI_0415 Metallo-beta-lactamase family protein, RNA-specific K12574 rnj; ribonuclease J [EC:3.1.-.-]
D RGUI_1944 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGUI_4320 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGUI_0711 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGUI_2346 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGUI_2383 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGUI_2461 Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGUI_2557 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGUI_1397 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGUI_4011 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RGUI_1735 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGUI_0586 UDP-galactose-lipid carrier transferase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGUI_0123 Polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D RGUI_2498 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RGUI_3117 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGUI_2894 ATP-binding protein ManX K06958 rapZ; RNase adapter protein RapZ
D RGUI_4037 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rhc03011]
D RGUI_0545 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D RGUI_0280 SSU ribosomal protein K02967 RP-S2; small subunit ribosomal protein S2
D RGUI_1379 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D RGUI_2116 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D RGUI_1368 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D RGUI_0330 SSU ribosomal protein K02990 RP-S6; small subunit ribosomal protein S6
D RGUI_1389 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D RGUI_1371 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D RGUI_0989 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D RGUI_1386 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D RGUI_1360 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D RGUI_1390 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D RGUI_1361 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D RGUI_1372 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D RGUI_2697 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D RGUI_2965 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D RGUI_1376 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D RGUI_0331 SSU ribosomal protein K02963 RP-S18; small subunit ribosomal protein S18
D RGUI_1381 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D RGUI_2240 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D RGUI_1430 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D RGUI_2933 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D RGUI_1382 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D RGUI_1385 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D RGUI_1384 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D RGUI_1373 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D RGUI_1370 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D RGUI_0332 LSU ribosomal protein K02939 RP-L9; large subunit ribosomal protein L9
D RGUI_2935 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D RGUI_2932 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D RGUI_2936 LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGUI_0990 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D RGUI_1375 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D RGUI_1365 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D RGUI_1378 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D RGUI_1358 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D RGUI_1369 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D RGUI_2960 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D RGUI_3155 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D RGUI_1017 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D RGUI_1380 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D RGUI_1383 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D RGUI_1374 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D RGUI_1016 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D RGUI_4040 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D RGUI_1377 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D RGUI_1367 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D RGUI_2959 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D RGUI_0749 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D RGUI_1647 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D RGUI_2787 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D RGUI_3154 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D RGUI_2387 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D RGUI_0533 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D RGUI_4134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4159 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4169 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4168 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rhc03009]
D RGUI_2882 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGUI_2884 GTP-binding protein Era K03595 era; GTPase
D RGUI_1013 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D RGUI_0773 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D RGUI_2517 Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGUI_3744 Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D RGUI_2931 Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGUI_1514 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RGUI_3532 Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGUI_2328 16S rRNA m(5)C 967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGUI_3216 Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D RGUI_2696 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RGUI_2103 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RGUI_2465 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGUI_1911 rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RGUI_1632 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGUI_3762 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RGUI_3659 Heat shock protein FtsJ/RrmJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RGUI_3113 LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RGUI_3864 LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D RGUI_1227 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D RGUI_1396 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RGUI_2502 23S rRNA (Uracil-5-) -methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RGUI_2378 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RGUI_0696 Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RGUI_1351 Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RGUI_3769 Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGUI_0529 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D RGUI_0595 Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RGUI_3264 Ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D RGUI_1143 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D RGUI_2963 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D RGUI_1472 Ribosomal protein S12p K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RGUI_3596 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RGUI_1048 Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGUI_1556 Putative Holliday junction resolvase YggF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RGUI_0711 Helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D RGUI_0364 GTP-binding protein EngA K03977 engA; GTPase
D RGUI_4010 GTP-binding protein HflX K03665 hflX; GTPase
D RGUI_2088 TsaC protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGUI_2875 GTP pyrophosphokinase, (p)ppGpp synthetase II K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGUI_0333 Metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGUI_2333 Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D RGUI_2516 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D RGUI_3112 Iojap protein K09710 ybeB; ribosome-associated protein
D RGUI_0553 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly K07042 ybeY; probable rRNA maturation factor
D RGUI_2564 Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D RGUI_1466 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:rhc03016]
D RGUI_1325 Ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D RGUI_0405 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0567 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_1732 Prolyl-tRNA synthetase, bacterial type K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGUI_1789 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGUI_3294 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGUI_3123 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGUI_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGUI_4001 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGUI_3535 Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGUI_1172 Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGUI_0362 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGUI_0733 Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGUI_1166 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGUI_1605 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGUI_3157 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGUI_1445 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGUI_1534 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGUI_1637 Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGUI_1188 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RGUI_1019 Ser-tRNA(Ala) deacylase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D RGUI_0530 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGUI_0549 tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RGUI_1792 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGUI_2335 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RGUI_3545 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGUI_2088 TsaC protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGUI_0148 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGUI_2463 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RGUI_2464 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGUI_3230 Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D RGUI_2559 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGUI_2788 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D RGUI_2470 Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RGUI_2569 Ribonuclease D related protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RGUI_3482 Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D RGUI_2927 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D RGUI_3367 Lysyl-tRNA synthetase (class I) K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D RGUI_1180 Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGUI_1179 Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGUI_0170 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGUI_0697 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RGUI_1559 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RGUI_4018 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RGUI_0556 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RGUI_2656 tRNA-t(6)A37 methylthiotransferase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D RGUI_3171 Methyltransferase type 11 K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D RGUI_1004 tRNA:Cm32/Um32 methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RGUI_0173 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RGUI_2961 tRNA (Guanine37-N1) -methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RGUI_2378 Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D RGUI_0162 tRNA-specific 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGUI_2790 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RGUI_1274 Molybdopterin biosynthesis protein MoeB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGUI_3308 Iron binding protein SufA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D RGUI_2010 putative iron binding protein K13628 iscA; iron-sulfur cluster assembly protein
D RGUI_1764 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D RGUI_3894 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RGUI_2288 Iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RGUI_3222 Selenophosphate-dependent tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RGUI_1139 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RGUI_1654 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RGUI_0594 TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RGUI_2426 TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RGUI_2444 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RGUI_1944 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGUI_2383 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rhc03012]
D RGUI_2519 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RGUI_3300 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RGUI_1502 ABC transporter ATP-binding protein uup K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RGUI_0281 Translation elongation factor K02357 tsf; elongation factor Ts
D RGUI_1387 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_2907 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_0509 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D RGUI_1388 Translation elongation factor G K02355 fusA; elongation factor G
D RGUI_1517 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RGUI_0150 Ribosome recycling factor K02838 frr; ribosome recycling factor
D RGUI_1516 Protein-N(5)-glutamine methyltransferase PrmC K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RGUI_0536 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RGUI_1132 Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D RGUI_1766 Translation elongation factor P K02356 efp; elongation factor P
D RGUI_1546 Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RGUI_0674 Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RGUI_2182 Hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rhc03110]
D RGUI_1415 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RGUI_3176 hypothetical protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RGUI_3643 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RGUI_2451 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RGUI_2557 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGUI_2197 Putative heat shock protein YegD K04046 yegD; hypothetical chaperone protein
D RGUI_1397 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGUI_2556 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGUI_1740 DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D RGUI_2496 Chaperonin, 33 kDa K04083 hslO; molecular chaperone Hsp33
D RGUI_2472 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RGUI_0510 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D RGUI_1921 Ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RGUI_1398 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RGUI_1205 HtrA protease/chaperone protein K04771 degP; serine protease Do [EC:3.4.21.107]
D RGUI_1653 Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGUI_2976 ATP synthase F0 sector subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGUI_2455 Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D RGUI_4041 Copper metallochaperone K09796 pccA; periplasmic copper chaperone A
D RGUI_2547 [NiFe] hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D RGUI_2548 [NiFe] hydrogenase nickel incorporation-associated protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D RGUI_1493 Peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RGUI_2523 Peptidyl-prolyl cis-trans isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RGUI_1512 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RGUI_2449 Thioredoxin K03671 TXN; thioredoxin
D RGUI_1810 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D RGUI_1823 Thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
D RGUI_2510 Glutaredoxin 3 (Grx2) K03676 grxC; glutaredoxin 3
D RGUI_3918 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D RGUI_0348 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:rhc04131]
D RGUI_1501 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGUI_3497 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGUI_1597 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGUI_3152 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGUI_2178 Arginine/ornithine antiporter ArcD K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:rhc03032]
D RGUI_2866 Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGUI_1072 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGUI_2669 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RGUI_2744 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D RGUI_0752 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RGUI_0544 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RGUI_2239 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGUI_1843 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGUI_1939 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_1607 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGUI_2238 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGUI_1506 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGUI_3292 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGUI_3775 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGUI_4344 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_3969 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_2456 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_1317 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGUI_3272 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGUI_0174 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGUI_2235 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGUI_2905 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGUI_3372 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGUI_3259 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rhc03036]
D RGUI_1072 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGUI_2882 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGUI_0001 hypothetical protein K26273 SBNO; protein strawberry notch
D RGUI_3624 Trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS
D RGUI_2669 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RGUI_2744 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D RGUI_0752 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RGUI_0544 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RGUI_2239 Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGUI_2371 Hemimethylated DNA binding protein K11940 hspQ; heat shock protein HspQ
D RGUI_4011 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D RGUI_2605 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGUI_1433 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGUI_2859 Chromosome partition protein smc K03529 smc; chromosome segregation protein
D RGUI_0759 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D RGUI_0758 Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D RGUI_1890 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGUI_3138 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGUI_1909 Cell division protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGUI_2366 Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RGUI_1910 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RGUI_1891 Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D RGUI_1899 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGUI_3139 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGUI_1886 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGUI_3916 hypothetical protein K09888 zapA; cell division protein ZapA
D RGUI_2159 ATPase, AFG1 family K06916 zapE; cell division protein ZapE
D RGUI_1548 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGUI_0101 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_4332 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_1158 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_2947 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGUI_2948 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RGUI_2950 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RGUI_2952 Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RGUI_2125 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_0024 Plasmid replication protein K03496 parA; chromosome partitioning protein
D RGUI_4227 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RGUI_0562 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_0670 putative partition-related protein K03496 parA; chromosome partitioning protein
D RGUI_2466 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_4293 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RGUI_0025 Plasmid replication protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0035 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2735 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2804 plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2467 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4292 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0034 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4228 Plasmid replication protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0809 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2905 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGUI_3372 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGUI_2464 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGUI_2465 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGUI_0173 tRNA:m(5)U-54 MTase gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D RGUI_1786 Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RGUI_0987 Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RGUI_0029 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D RGUI_0030 hypothetical protein K04763 xerD; integrase/recombinase XerD
D RGUI_0031 Tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D RGUI_3195 Mobile element protein K04763 xerD; integrase/recombinase XerD
D RGUI_3196 Mobile element protein K04763 xerD; integrase/recombinase XerD
D RGUI_3197 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D RGUI_1913 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGUI_3716 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGUI_2793 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rhc03400]
D RGUI_3449 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGUI_1025 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGUI_3277 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGUI_1671 Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGUI_2495 NTP pyrophosphohydrolases including oxidative damage repair enzyme K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGUI_2521 5-methyl-dCTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGUI_1593 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGUI_2138 Nudix hydrolase family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGUI_1625 Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGUI_1673 ADA regulatory protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RGUI_2942 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RGUI_2558 Alkylated DNA repair protein AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D RGUI_2081 Uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGUI_0905 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGUI_2242 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGUI_0771 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGUI_1824 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGUI_1725 Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGUI_0165 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGUI_0524 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGUI_3902 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D RGUI_0701 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D RGUI_2110 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D RGUI_1915 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGUI_2938 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGUI_2939 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGUI_1359 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGUI_2874 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGUI_0267 Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGUI_2473 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGUI_2321 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D RGUI_1196 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGUI_2680 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGUI_1607 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGUI_2238 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGUI_1506 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGUI_3292 DNA polymerase II K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGUI_3775 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGUI_4344 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_3969 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_2456 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGUI_1317 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_1073 Very-short-patch mismatch repair endonuclease (G-T specific) K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D RGUI_3534 RecA protein K03553 recA; recombination protein RecA
D RGUI_1667 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGUI_1666 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGUI_1668 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGUI_1783 Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGUI_0020 Exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D RGUI_0019 Exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D RGUI_1848 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RGUI_2237 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D RGUI_0166 ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGUI_2887 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGUI_1315 Recombination protein RecR K06187 recR; recombination protein RecR
D RGUI_1883 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RGUI_2448 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RGUI_2447 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D RGUI_2418 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RGUI_0261 ATPase component BioM of energizing module of biotin ECF transporter K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RGUI_0174 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGUI_2235 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGUI_3259 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D RGUI_2669 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D RGUI_2744 DNA-binding protein HBsu K03530 hupB; DNA-binding protein HU-beta
D RGUI_0752 Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D RGUI_0544 Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D RGUI_2346 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D RGUI_3624 Trans-acting regulatory protein hvrA K03746 hns; DNA-binding protein H-NS
D RGUI_2389 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RGUI_0403 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGUI_3125 hypothetical protein K14160 imuA; protein ImuA
D RGUI_3334 DNA polymerase-like protein K14161 imuB; protein ImuB
D RGUI_1941 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RGUI_3788 Helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RGUI_1486 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGUI_1600 Ribonucleotide reductase of class II (coenzyme B12-dependent) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:rhc03029]
D RGUI_2661 Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGUI_2519 Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D RGUI_3300 Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D RGUI_0281 Translation elongation factor K02357 tsf; elongation factor Ts
D RGUI_1387 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_2907 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_0509 Translation elongation factor G-related protein K02355 fusA; elongation factor G
D RGUI_1388 Translation elongation factor G K02355 fusA; elongation factor G
D RGUI_1922 ATP-dependent DNA helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D RGUI_2884 GTP-binding protein Era K03595 era; GTPase
D RGUI_1534 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGUI_3294 Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGUI_4001 Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGUI_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGUI_1642 Aspartyl-tRNA(Asn) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGUI_2364 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGUI_1863 Aspartyl-tRNA(Asn) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGUI_1641 Aspartyl-tRNA(Asn) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGUI_0141 Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGUI_0156 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D RGUI_2557 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGUI_2472 Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D RGUI_1397 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGUI_1398 Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D RGUI_2556 Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGUI_3545 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGUI_3918 putative monothiol glutaredoxin ycf64-like K07390 grxD; monothiol glutaredoxin
D RGUI_4028 hypothetical protein K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
D RGUI_1913 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGUI_3716 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGUI_1003 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGUI_2791 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGUI_2440 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rhc02000]
D RGUI_0372 Lipid A export ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGUI_2500 ABC transporter, transmembrane ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D RGUI_2501 ABC transporter, transmembrane ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGUI_4112 Phosphonate ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGUI_3351 ABC transporter, ATP binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGUI_2393 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_2392 putative ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_3510 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGUI_2022 Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D RGUI_2021 Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D RGUI_4267 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RGUI_0742 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D RGUI_3868 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D RGUI_3869 Molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D RGUI_3870 Molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGUI_0707 ABC-type tungstate transport system, periplasmic binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RGUI_0709 ABC-type tungstate transport system, permease protein K05773 tupB; tungstate transport system permease protein
D RGUI_0708 ABC-type tungstate transport system, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RGUI_2226 Nitrate ABC transporter, nitrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGUI_2227 Alkanesulfonates transport system permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D RGUI_2228 Nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGUI_0796 Taurine-binding periplasmic protein TauA K15551 tauA; taurine transport system substrate-binding protein
D RGUI_0798 Taurine transport system permease protein TauC K15552 tauC; taurine transport system permease protein
D RGUI_0797 Taurine transport ATP-binding protein TauB K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D RGUI_1523 Ferric iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGUI_0227 Ferric iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D RGUI_1865 Ferric iron ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGUI_2665 Thiamin ABC transporter, substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D RGUI_2664 Thiamin ABC transporter, transmembrane component K02063 thiP; thiamine transport system permease protein
D RGUI_2663 Thiamin ABC transporter, ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D RGUI_4352 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGUI_1031 ABC transporter, periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D RGUI_4350 ABC transporter permease component K11070 potC; spermidine/putrescine transport system permease protein
D RGUI_0119 Spermidine Putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D RGUI_4351 ABC transporter permease protein K11071 potB; spermidine/putrescine transport system permease protein
D RGUI_0118 Spermidine Putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D RGUI_0120 Putrescine transport ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGUI_4349 Putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D RGUI_1336 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_3583 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_1154 Spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D RGUI_1334 Putrescine transport system permease protein potI K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_3586 Polyamine ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_1152 ABC transporter, inner membrane subunit K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D RGUI_1335 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_3585 polyamine ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_1153 ABC transporter permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D RGUI_0456 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_1337 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_3582 Maltose/maltodextrin transport ATP-binding protein MalK K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_1155 Putrescine transport ATP-binding protein PotA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D RGUI_0937 Hydroxymethylpyrimidine ABC transporter, substrate-binding component K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D RGUI_0939 Hydroxymethylpyrimidine ABC transporter, transmembrane component K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D RGUI_0938 Hydroxymethylpyrimidine ABC transporter, ATPase component K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D RGUI_3635 ABC transporter, periplasmic substrate-binding protein YnjB K05777 ynjB; putative thiamine transport system substrate-binding protein
D RGUI_3634 ABC transporter, permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein
D RGUI_3633 ABC transporter, ATP-binding protein YnjD K05779 ynjD; putative thiamine transport system ATP-binding protein
D RGUI_0781 Pyrimidine ABC transporter, substrate-binding component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RGUI_0946 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RGUI_3845 putative sulfonate/nitrate transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D RGUI_0782 Pyrimidine ABC transporter, transmembrane component 1 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGUI_0783 Pyrimidine ABC transporter, transmembrane component 1 K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGUI_0945 Taurine transport system permease protein TauC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGUI_3844 Hydroxymethylpyrimidine ABC transporter, transmembrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D RGUI_0944 Alkanesulfonates ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGUI_0785 Pyrimidine ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGUI_3843 Sulfate and thiosulfate import ATP-binding protein CysA K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D RGUI_0090 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_2405 Various polyols ABC transporter, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_1702 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_0978 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D RGUI_4301 Alpha-glucosides-binding periplasmic protein AglE precursor K10232 aglE; alpha-glucoside transport system substrate-binding protein
D RGUI_4302 ABC alpha-glucoside transporter, inner membrane subunit AglF K10233 aglF; alpha-glucoside transport system permease protein
D RGUI_4303 Alpha-glucoside transport system permease protein AglG K10234 aglG; alpha-glucoside transport system permease protein
D RGUI_4305 Alpha-glucoside transport ATP-binding protein AglK K10235 aglK; alpha-glucoside transport system ATP-binding protein
D RGUI_0981 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D RGUI_0980 ABC-type sugar transport system, permease component K17316 gtsB; glucose/mannose transport system permease protein
D RGUI_0979 ABC-type sugar transport system, permease component K17317 gtsC; glucose/mannose transport system permease protein
D RGUI_2676 Fructose ABC transporter, substrate-binding component FrcB K10552 frcB; fructose transport system substrate-binding protein
D RGUI_2675 Fructose ABC transporter, permease component FrcC K10553 frcC; fructose transport system permease protein
D RGUI_2674 Fructose ABC transporter, ATP-binding component FrcA K10554 frcA; fructose transport system ATP-binding protein
D RGUI_2198 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE K17237 inoE; inositol-phosphate transport system substrate-binding protein
D RGUI_2199 ABC transporter, membrane spanning protein K17238 inoF; inositol-phosphate transport system permease protein
D RGUI_2200 ABC transporter, membrane spanning protein K17239 inoG; inositol-phosphate transport system permease protein
D RGUI_2201 Sugar ABC transporter, ATP-binding protein K17240 inoK; inositol-phosphate transport system ATP-binding protein
D RGUI_3838 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGUI_0879 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D RGUI_3839 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGUI_0880 Glycerol-3-phosphate ABC transporter, permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D RGUI_3840 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGUI_0881 Glycerol-3-phosphate ABC transporter, permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D RGUI_3841 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGUI_0882 Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D RGUI_0093 Various polyols ABC transporter, periplasmic substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein
D RGUI_0092 Various polyols ABC transporter, permease component 1 K10228 smoF; polyol transport system permease protein
D RGUI_0091 Various polyols ABC transporter, permease component 2 K10229 smoG; polyol transport system permease protein
D RGUI_0596 putative nucleoside ABC transporter, substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D RGUI_1614 Nucleoside ABC transporter, periplasmic nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D RGUI_0600 putative nucleoside ABC transporter, permease 1 component K23535 nupB; general nucleoside transport system permease protein
D RGUI_1612 Nucleoside ABC transporter, permease protein 1 K23535 nupB; general nucleoside transport system permease protein
D RGUI_1613 Nucleoside ABC transporter, permease protein 2 K23536 nupC; general nucleoside transport system permease protein
D RGUI_0601 putative nucleoside ABC transporter, permease 2 component K23536 nupC; general nucleoside transport system permease protein
D RGUI_1611 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_0598 putative nucleoside ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_0599 putative nucleoside ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D RGUI_3646 ABC-type transport system periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGUI_1845 ABC-type transport system permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGUI_1846 Histidine ABC transporter, ATP-binding protein HisP K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGUI_2152 ABC-type transport system auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein
D RGUI_1699 Inositol transport system sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RGUI_2401 ABC-type sugar transport system, periplasmic binding protein YcjN K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D RGUI_1701 Sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D RGUI_2402 Inner membrane ABC transporter permease protein YcjO K02025 ABC.MS.P; multiple sugar transport system permease protein
D RGUI_1700 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RGUI_2403 Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RGUI_2404 Inner membrane ABC transporter permease protein YcjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D RGUI_0290 Phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D RGUI_0289 Phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D RGUI_0288 Phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D RGUI_0287 Phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGUI_2647 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_0649 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_0651 Phosphonate ABC transporter phosphate-binding periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein
D RGUI_2645 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RGUI_2646 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RGUI_0646 Phosphonate ABC transporter permease protein phnE1 K02042 phnE; phosphonate transport system permease protein
D RGUI_0647 Phosphonate ABC transporter permease protein phnE2 K02042 phnE; phosphonate transport system permease protein
D RGUI_0653 Phosphonate ABC transporter permease protein phnE K02042 phnE; phosphonate transport system permease protein
D RGUI_2648 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_0650 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_0652 Phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGUI_1347 Glutamate Aspartate periplasmic binding protein precursor GltI K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RGUI_1346 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztB K09970 aapQ; general L-amino acid transport system permease protein
D RGUI_1345 Glutamate/glutamine/aspartate/asparagine transport system permease protein bztC K09971 aapM; general L-amino acid transport system permease protein
D RGUI_1343 Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RGUI_0791 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3012 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_3884 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0576 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_2305 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0301 Branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0239 Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGUI_0792 Branched-chain amino acid transport system permease protein LivM K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3013 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_3885 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0577 High-affinity branched-chain amino acid transport system permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_2308 Branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0305 High-affinity branched-chain amino acid transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0238 putative ABC transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D RGUI_0306 Branched-chain amino acid transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3014 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_3886 putative ABC-transporter permease component K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0578 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_2306 Branched-chain amino acid transport system permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D RGUI_0793 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3015 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_3887 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0579 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_2309 Branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0236 hypothetical protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0302 Branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGUI_0794 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0235 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0303 Branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3016 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3888 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_0580 Branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_2304 Branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGUI_3401 Urea ABC transporter, urea binding protein K11959 urtA; urea transport system substrate-binding protein
D RGUI_3400 Urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D RGUI_3399 Urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D RGUI_3398 Urea ABC transporter, ATPase protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGUI_3397 Urea ABC transporter, ATPase protein UrtE K11963 urtE; urea transport system ATP-binding protein
D RGUI_1230 His/Glu/Gln/Arg/opine family ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGUI_2627 amino acid ABC transporter, periplasmic substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGUI_1231 ABC transporter, permease protein, HisMQ family K02029 ABC.PA.P; polar amino acid transport system permease protein
D RGUI_1229 Histidine ABC transporter, ATP-binding protein HisP K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D RGUI_0863 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_2595 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_3459 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0889 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0899 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0491 Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0147 Oligopeptide/dipeptide ABC transporter, periplasmic substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_1067 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_4099 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0665 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_2410 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_3087 Dipeptide-binding ABC transporter, periplasmic substrate-binding component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGUI_0862 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_2594 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_3458 Peptide/nickel/opine uptake family ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0892 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_3088 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0494 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0146 Oligopeptide/dipeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_4100 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0664 Oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_2409 Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0897 Oligopeptide transport system permease protein OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGUI_0861 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_3457 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0893 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0898 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_3089 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0495 Peptide/opine/nickel uptake family ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0145 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_4101 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_0663 Oligopeptide transport system permease protein OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_2408 Dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGUI_2593 putative oligopeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0860 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0890 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3085 Dipeptide transport ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0496 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0144 Oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_4102 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_0662 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_2407 Oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3461 Oligopeptide transport system permease protein OppB K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGUI_3460 Oligopeptide transport ATP-binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D RGUI_1314 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RGUI_3315 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA K13893 yejA; microcin C transport system substrate-binding protein
D RGUI_1313 Oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D RGUI_1312 Oligopeptide/dipeptide uptake family ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D RGUI_1311 Oligopeptide transport system permease protein OppB K13896 yejF; microcin C transport system ATP-binding protein
D RGUI_0067 Periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D RGUI_0066 Hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D RGUI_0065 ABC-type hemin transport system, ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D RGUI_1684 Vitamin B12 ABC transporter, B12-binding component BtuF K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RGUI_1685 Vitamin B12 ABC transporter, permease component BtuC K02015 ABC.FEV.P; iron complex transport system permease protein
D RGUI_1686 Vitamin B12 ABC transporter, ATPase component BtuD K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RGUI_2039 Zinc ABC transporter, periplasmic-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D RGUI_2036 Zinc ABC transporter, inner membrane permease protein ZnuB K09816 znuB; zinc transport system permease protein
D RGUI_2037 Zinc ABC transporter, ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D RGUI_4254 Transmembrane component NikQ of energizing module of nickel ECF transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D RGUI_4252 Substrate-specific component NikM of nickel ECF transporter K02007 cbiM; cobalt/nickel transport system permease protein
D RGUI_4255 ATPase component NikO of energizing module of nickel ECF transporter K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D RGUI_4251 Additional periplasmic component NikK of nickel ECF transporter K10094 cbiK; nickel transport protein
D RGUI_4253 Substrate-specific component NikM of nickel ECF transporter K16915 cbiL; nickel transport protein
D RGUI_1458 Substrate-specific component NikM of nickel ECF transporter K16915 cbiL; nickel transport protein
D RGUI_0338 Substrate-specific component BioY of biotin ECF transporter K03523 bioY; biotin transport system substrate-specific component
D RGUI_2995 Structural protein K09688 kpsM; capsular polysaccharide transport system permease protein
D RGUI_2993 Capsule polysaccharide export inner-membrane protein K10107 kpsE; capsular polysaccharide transport system permease protein
D RGUI_2992 Capsular polysaccharide ABC transporter, ATP-binding protein KpsT K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D RGUI_1509 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D RGUI_1510 Permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D RGUI_2565 Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGUI_1730 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D RGUI_1729 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGUI_0350 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D RGUI_0351 ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D RGUI_0352 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D RGUI_3139 Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGUI_3138 Cell division transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGUI_0941 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGUI_1470 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGUI_3591 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGUI_0942 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGUI_0528 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGUI_3592 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGUI_0584 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D RGUI_3225 AttF component of AttEFGH ABC transport system K02004 ABC.CD.P; putative ABC transport system permease protein
D RGUI_2035 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGUI_0583 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGUI_3226 AttE component of AttEFGH ABC transport system K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGUI_2034 ABC transporter ATP-binding protein YvcR K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGUI_3548 Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D RGUI_3370 Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM K26939 norM; MATE family, multidrug efflux pump
D RGUI_0907 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D RGUI_1998 Permease of the major facilitator superfamily K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D RGUI_1497 PucC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGUI_1982 PucC protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGUI_1991 Bacteriochlorophyll synthase 44.5 kDa chain K08226 pucC; MFS transporter, BCD family, chlorophyll transporter
D RGUI_0721 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGUI_1755 Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGUI_0268 MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGUI_3068 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D RGUI_2178 Arginine/ornithine antiporter ArcD K06902 UMF1; MFS transporter, UMF1 family
D RGUI_2922 Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D RGUI_2896 Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D RGUI_2895 PTS system permease (IIAMan), nitrogen regulatory IIA protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGUI_2563 PTS system nitrogen-specific IIA component, PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RGUI_3842 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGUI_3343 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGUI_3345 Ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGUI_3393 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_0915 Maleylacetoacetate isomerase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_0438 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_2289 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_3291 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_2659 Glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGUI_2222 Nitrite transporter from formate/nitrite family K21993 fdhC; formate transporter
D RGUI_1435 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D RGUI_1020 Potassium efflux system KefA protein K05802 mscK; potassium-dependent mechanosensitive channel
D RGUI_2032 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter
D RGUI_3793 Mg/Co/Ni transporter MgtE K06213 mgtE; magnesium transporter
D RGUI_2271 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RGUI_1416 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_2284 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_1679 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RGUI_0070 Ferric siderophore transport system, biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D RGUI_3059 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D RGUI_1680 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D RGUI_0071 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D RGUI_0072 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D RGUI_3057 hypothetical protein K03559 exbD; biopolymer transport protein ExbD
D RGUI_1660 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D RGUI_1659 Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D RGUI_1681 Biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR
D RGUI_1527 Magnesium and cobalt transport protein CorA K16074 zntB; zinc transporter
D RGUI_1352 CrcB protein K06199 crcB; fluoride exporter
D RGUI_0988 Co2 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGUI_3296 Porin K08720 ompU; outer membrane protein OmpU
D RGUI_0738 outer membrane protein, putative K16079 omp31; outer membrane immunogenic protein
D RGUI_2105 OmpA domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGUI_2171 OmpA domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGUI_1286 putative facilitator of salicylate uptake K06076 fadL; long-chain fatty acid transport protein
D RGUI_0128 Outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D RGUI_3050 Flagellar hook-length control protein FliK K19231 bmaC; fibronectin-binding autotransporter adhesin
D RGUI_1683 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D RGUI_0064 TonB-dependent hemin, ferrichrome receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_4330 RND efflux system, outer membrane lipoprotein CmeC K18904 nodT; outer membrane protein, multidrug efflux system
D RGUI_4192 Periplasmic protein involved in polysaccharide export K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_2721 Polysaccharide export lipoprotein Wza K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_1940 Capsule polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D RGUI_0156 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D RGUI_0365 Outer membrane protein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D RGUI_1884 competence lipoprotein Com K05807 bamD; outer membrane protein assembly factor BamD
D RGUI_1496 Outer membrane protein assembly factor YaeT precursor K07278 tamA; translocation and assembly module TamA
D RGUI_1495 gramicidin S biosynthesis grst protein K09800 tamB; translocation and assembly module TamB
D RGUI_2566 Protein-glutamate methylesterase family protein K09774 lptA; lipopolysaccharide export system protein LptA
D RGUI_2567 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RGUI_1511 Outer membrane protein Imp, required for envelope biogenesis K04744 lptD; LPS-assembly protein
D RGUI_3293 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D RGUI_0552 Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D RGUI_1623 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D RGUI_0531 Metal transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D RGUI_0050 Cobalt-zinc-cadmium resistance protein K07787 cusA; copper/silver efflux system protein
D RGUI_0100 RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D RGUI_4331 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1157 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_0369 RND multidrug efflux transporter K18989 vexF; multidrug efflux pump
D RGUI_3538 Ethidium bromide-methyl viologen resistance protein EmrE K03297 emrE; small multidrug resistance pump
D RGUI_2307 hypothetical protein K18925 ykkD; paired small multidrug resistance pump
D RGUI_0374 RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RGUI_3527 hypothetical protein K03304 tehA; tellurite resistance protein
D RGUI_3250 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D RGUI_2113 K+-dependent Na+/Ca+ exchanger related-protein K07301 yrbG; cation:H+ antiporter
D RGUI_4346 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D RGUI_3973 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D RGUI_3974 Acetate permease ActP (cation/acetate symporter) K14393 actP; cation/acetate symporter
D RGUI_2958 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D RGUI_1743 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D RGUI_1526 Na+/H+ antiporter NhaP K03316 nhaP; Na+:H+ antiporter
D RGUI_2395 putative Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RGUI_1918 putative Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RGUI_2638 Potassium uptake protein, integral membrane component, KtrB K03498 trkH; trk/ktr system potassium uptake protein
D RGUI_4012 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D RGUI_1183 Potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D RGUI_2637 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RGUI_4013 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RGUI_1879 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RGUI_1039 Chromate transporter K07240 chrA; chromate transporter
D RGUI_1678 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RGUI_3149 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RGUI_0229 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGUI_3303 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGUI_3304 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RGUI_0230 TRAP dicarboxylate transporter, DctQ subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D RGUI_0231 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_3305 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_2341 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_2484 TRAP-type C4-dicarboxylate transport system, large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_0202 TRAP dicarboxylate transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D RGUI_1331 TRAP-type C4-dicarboxylate transport system, large permease component K21393 yiaN; TRAP-type transport system large permease protein
D RGUI_1332 TRAP-type C4-dicarboxylate transport system, small permease component K21394 yiaM; TRAP-type transport system small permease protein
D RGUI_2343 TRAP transporter solute receptor K21395 yiaO; TRAP-type transport system periplasmic protein
D RGUI_2482 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein
D RGUI_3964 TRAP-type C4-dicarboxylate transport system, periplasmic component K21395 yiaO; TRAP-type transport system periplasmic protein
D RGUI_0204 hypothetical protein K03325 ACR3; arsenite transporter
D RGUI_1635 putative peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RGUI_2153 malonate transporter K13936 mdcF; malonate transporter and related proteins
D RGUI_3772 malonate transporter K13936 mdcF; malonate transporter and related proteins
D RGUI_2377 Transporter, LysE family K05834 rhtB; homoserine/homoserine lactone efflux protein
D RGUI_1839 transmembrane efflux protein, homoserine/threonine (RhtB) family K05834 rhtB; homoserine/homoserine lactone efflux protein
D RGUI_1491 L-lysine permease K05835 rhtC; threonine efflux protein
D RGUI_3931 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D RGUI_2093 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D RGUI_3930 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D RGUI_2092 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D RGUI_2999 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_0872 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_2617 Tricarboxylate transport membrane protein TctA K07793 tctA; putative tricarboxylic transport membrane protein
D RGUI_0873 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RGUI_2616 Tricarboxylate transport protein TctB K07794 tctB; putative tricarboxylic transport membrane protein
D RGUI_2615 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RGUI_2997 Tricarboxylate transport protein TctC K07795 tctC; putative tricarboxylic transport membrane protein
D RGUI_2181 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D RGUI_0138 Integral membrane protein K22736 VIT; vacuolar iron transporter family protein
D RGUI_3340 putative transmembrane iron-regulated protein K22737 mbfA; erythrin-vacuolar iron transport family protein
D RGUI_1504 Membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D RGUI_1899 Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D RGUI_0073 Ferric siderophore transport system, periplasmic binding protein K03832 tonB; periplasmic protein TonB
D RGUI_2170 OmpA domain protein K03640 pal; peptidoglycan-associated lipoprotein
D RGUI_1656 18K peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D RGUI_3246 Outer membrane lipoprotein precursor, OmpA family K03640 pal; peptidoglycan-associated lipoprotein
D RGUI_1657 tolB protein precursor K03641 tolB; TolB protein
D RGUI_1051 Oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D RGUI_1052 Methylcrotonyl-CoA carboxylase biotin-containing subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D RGUI_1053 hypothetical protein K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D RGUI_3423 sulfur oxidation V protein K06196 ccdA; cytochrome c-type biogenesis protein
D RGUI_1047 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein
D RGUI_3067 Multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D RGUI_3511 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RGUI_0051 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D RGUI_2391 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RGUI_0101 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_4332 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_1158 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_0368 putative Co/Zn/Cd efflux system membrane fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D RGUI_4266 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RGUI_2715 Succinoglycan biosynthesis transport protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D RGUI_4197 Exopolysaccharide biosynthesis domain protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGUI_4196 hypothetical protein K25590 epsF; protein tyrosine kinase modulator
D RGUI_1589 Ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D RGUI_1590 hypothetical protein K04758 feoA; ferrous iron transport protein A
D RGUI_2489 hypothetical protein K04758 feoA; ferrous iron transport protein A
D RGUI_1588 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RGUI_2488 Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D RGUI_2601 TspO and MBR like protein K05770 TSPO; translocator protein
D RGUI_1967 Regulatory protein TspO K05770 TSPO; translocator protein
D RGUI_2064 hypothetical protein K16348 ecnB; entericidin B
D RGUI_0410 Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D RGUI_1192 Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D RGUI_3391 Transthyretin family protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D RGUI_0047 Copper resistance protein K07245 pcoD; copper resistance protein D
D RGUI_0048 Copper resistance protein K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:rhc02044]
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D RGUI_3510 Type I secretion system ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGUI_3511 Type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system
D RGUI_2393 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_2392 putative ABC transporter ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGUI_2391 HlyD family secretion protein K12542 lapC; membrane fusion protein, adhesin transport system
D RGUI_4195 General secretion pathway protein A K02450 gspA; general secretion pathway protein A
D RGUI_3238 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RGUI_3248 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RGUI_3247 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RGUI_3244 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RGUI_3243 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGUI_3242 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D RGUI_3241 Type II/IV secretion system protein TadC, associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D RGUI_2176 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) K02221 yggT; YggT family protein
D RGUI_0404 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RGUI_2269 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGUI_2267 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGUI_2275 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGUI_2255 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGUI_2277 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGUI_2278 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGUI_2260 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGUI_2268 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGUI_3559 Conjugal transfer coupling protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_3185 Conjugal transfer coupling protein TraG K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_2824 Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D RGUI_2826 Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D RGUI_3566 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RGUI_2827 Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D RGUI_3567 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D RGUI_2828 Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D RGUI_3568 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RGUI_2829 Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D RGUI_2834 Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D RGUI_3574 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D RGUI_2835 Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D RGUI_3575 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D RGUI_2836 Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D RGUI_3569 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RGUI_2830 Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D RGUI_3571 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D RGUI_2833 Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D RGUI_3045 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D RGUI_3052 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D RGUI_3044 Outer membrane protein ImpK/VasF, OmpA/MotB domain K11892 impK; type VI secretion system protein ImpK
D RGUI_3051 Flagellar motor rotation protein MotB K11892 impK; type VI secretion system protein ImpK
D RGUI_3043 Uncharacterized protein ImpJ/VasE K11893 impJ; type VI secretion system protein ImpJ
D RGUI_3037 Uncharacterized protein ImpH/VasB K11895 impH; type VI secretion system protein ImpH
D RGUI_3036 Protein ImpG/VasA K11896 impG; type VI secretion system protein ImpG
D RGUI_3035 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D RGUI_3032 Uncharacterized protein ImpC K11900 impC; type VI secretion system protein ImpC
D RGUI_3031 Uncharacterized protein ImpB K11901 impB; type VI secretion system protein ImpB
D RGUI_3030 Uncharacterized protein ImpA K11902 impA; type VI secretion system protein ImpA
D RGUI_3033 Uncharacterized protein ImpD K11903 hcp; type VI secretion system secreted protein Hcp
D RGUI_3039 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGUI_3038 ClpB protein K11907 vasG; type VI secretion system protein VasG
D RGUI_3046 Protein phosphatase ImpM K11890 impM; type VI secretion system protein ImpM
D RGUI_3065 Uncharacterized protein ImpI/VasC K11894 impI; type VI secretion system protein ImpI
D RGUI_3034 Protein of avirulence locus ImpE K11898 impE; type VI secretion system protein ImpE
D RGUI_3042 Uncharacterized protein ImpI/VasC K11913 fha1; type VI secretion system protein
D RGUI_2524 Protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGUI_2455 Protein export cytoplasm chaperone protein K03071 secB; preprotein translocase subunit SecB
D RGUI_0356 Protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D RGUI_2930 Preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGUI_0355 Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D RGUI_1225 Preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGUI_1364 Preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D RGUI_2970 Signal recognition particle, subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGUI_1193 Signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D RGUI_0357 Preprotein translocase subunit K03210 yajC; preprotein translocase subunit YajC
D RGUI_2791 Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGUI_1867 Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGUI_1868 Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGUI_1869 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rhc02042]
D RGUI_0988 Co2 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGUI_3992 putative membrane protein hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:rhc02022]
D RGUI_0291 Phosphate regulon sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGUI_0285 Phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGUI_1087 Sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D RGUI_2682 DNA-binding response regulator PetR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D RGUI_1781 sensory box histidine kinase/response regulator K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D RGUI_0973 Two-component response regulator K07671 prrA; two-component system, OmpR family, response regulator PrrA
D RGUI_2892 Sensor histidine kinase ChvG K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3]
D RGUI_2891 DNA-binding response regulator ChvI K14981 chvI; two-component system, OmpR family, response regulator ChvI
D RGUI_0478 Two component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGUI_1570 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGUI_0242 Response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGUI_3955 Two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGUI_4017 Nitrogen regulation protein NtrB K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGUI_4016 Nitrogen regulation protein NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGUI_4015 Nitrogen regulation protein NtrY K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGUI_4014 Nitrogen regulation protein NtrX K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGUI_3478 C4-dicarboxylate transport sensor protein DctB K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D RGUI_2533 Signal transduction histidine kinase HoxJ (hydrogenase regulation) K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3]
D RGUI_2549 Hydrogenase transcriptional regulatory protein HoxA K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA
D RGUI_2186 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3611 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_2184 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2187 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3610 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3614 Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2190 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_2191 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3617 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3952 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_0220 Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_2855 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_1478 GGDEF domain protein K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D RGUI_3533 sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_3122 Sensory box histidine kinase/response regulator K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D RGUI_0164 DNA-binding response regulator K13584 ctrA; two-component system, cell cycle response regulator CtrA
D RGUI_2854 Two-component response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D RGUI_2441 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGUI_2439 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D RGUI_2554 Signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_2636 Sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_0964 Signal transduction histidine kinase K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGUI_2224 Nitrate ABC transporter, nitrate-binding protein K22067 nasS; two-component system, oxyanion-binding sensor
D RGUI_2223 Response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:rhc02035]
D RGUI_2186 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_3611 Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGUI_2192 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_3612 Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D RGUI_3618 Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGUI_2188 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_3613 Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGUI_2190 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_2191 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3617 Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGUI_3952 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_0220 Chemotaxis protein methyltransferase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_2855 Chemotaxis protein methyltransferase CheR K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGUI_2184 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_2187 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3610 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_3614 Chemotaxis protein cheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGUI_1591 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3346 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3433 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3542 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3616 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1951 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0246 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_1234 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3024 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2193 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_0487 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_3233 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_4114 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D RGUI_2255 Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGUI_2278 Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGUI_2260 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGUI_2268 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGUI_2269 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGUI_2267 Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGUI_0342 Flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D RGUI_0245 Flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D RGUI_2277 Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D RGUI_2275 Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGUI_2280 Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGUI_2263 Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGUI_2264 Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGUI_2274 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D RGUI_2265 hypothetical protein K02415 fliL; flagellar protein FliL
D RGUI_2259 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D RGUI_2246 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D RGUI_2257 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGUI_2258 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGUI_2245 Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGUI_2261 Flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D RGUI_2262 Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGUI_2248 flagellar protein FlgJ, putative K02395 flgJ; peptidoglycan hydrolase FlgJ
D RGUI_2283 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGUI_2282 Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGUI_2281 Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGUI_2251 Flagellin protein FlaA K02406 fliC; flagellin
D RGUI_2271 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D RGUI_1416 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_2284 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D RGUI_2252 flagellar protein FlaF K06602 flaF; flagellar biosynthesis activator protein FlaF
D RGUI_2253 Flagellar basal-body rod modification protein FlgD K06601 flbT; flagellar biosynthesis repressor protein FlbT
D RGUI_3238 Type IV prepilin peptidase TadV/CpaA K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D RGUI_3248 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D RGUI_3247 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D RGUI_3244 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly K02282 cpaE; pilus assembly protein CpaE
D RGUI_3243 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rhc04812]
D RGUI_2947 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGUI_1886 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGUI_1890 Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGUI_2125 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_0024 Plasmid replication protein K03496 parA; chromosome partitioning protein
D RGUI_4227 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RGUI_0562 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_0670 putative partition-related protein K03496 parA; chromosome partitioning protein
D RGUI_2466 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D RGUI_4293 Plasmid replication protein RepA K03496 parA; chromosome partitioning protein
D RGUI_0025 Plasmid replication protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0035 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2735 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2804 plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_2467 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4292 Chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0034 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_4228 Plasmid replication protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGUI_0809 ParB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rhc04147]
D RGUI_1530 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGUI_3497 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGUI_3496 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_1538 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGUI_3152 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGUI_2411 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D RGUI_1397 Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGUI_2557 Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D RGUI_2206 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGUI_3531 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGUI_1387 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_2907 Translation elongation factor Tu K02358 tuf; elongation factor Tu
D RGUI_0530 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGUI_1777 1-acyl-sn-glycerol-3-phosphate acyltransferase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_2311 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGUI_4324 Selenium-binding protein 1 K17285 SELENBP1; methanethiol oxidase [EC:1.8.3.4]
D RGUI_0917 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2211 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_3131 Acetyl-CoA acetyltransferase of ethylmalonyl-CoA pathway K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2338 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2375 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGUI_2434 Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGUI_1363 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGUI_4356 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGUI_2912 Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D RGUI_2097 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGUI_2491 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGUI_0736 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D RGUI_0786 Dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D RGUI_3500 Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGUI_0393 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGUI_2397 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D RGUI_3008 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGUI_1693 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0337 Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_1233 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_3806 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D RGUI_0265 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGUI_2147 Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGUI_1927 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2195 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D RGUI_2326 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGUI_3366 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_3898 Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_0633 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGUI_2901 Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D RGUI_2208 Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGUI_3307 Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGUI_1597 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:rhc02048]
D RGUI_2418 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D RGUI_2417 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D RGUI_2420 CRISPR-associated protein, Csn1 family K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D RGUI_3273 Modification methylase K13581 ccrM; modification methylase [EC:2.1.1.72]
D RGUI_1072 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGUI_0189 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D RGUI_1747 Mrr restriction system protein K07448 mrr; restriction system protein
D RGUI_0057 Programmed cell death antitoxin MazE K07172 mazE; antitoxin MazE
D RGUI_0054 transcriptional regulator K06218 relE; mRNA interferase RelE/StbE
D RGUI_2801 Hipa protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D RGUI_0371 ParE toxin protein K19092 parE1_3_4; toxin ParE1/3/4
D RGUI_0370 ParD protein (antitoxin to ParE) K07746 parD1_3_4; antitoxin ParD1/3/4
D RGUI_4217 Death on curing protein, Doc toxin K07341 doc; death on curing protein
D RGUI_0085 VapC toxin protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D RGUI_1886 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGUI_2947 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D RGUI_2905 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGUI_3372 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGUI_0405 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_0567 Glutamyl-tRNA(Gln) synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGUI_3363 hypothetical protein K09159 cptB; antitoxin CptB
D RGUI_3545 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:rhc01504]
D RGUI_0721 Tetracycline efflux protein TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D RGUI_0667 membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D RGUI_0101 RND efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_4332 Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_1158 RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D RGUI_0100 RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D RGUI_4331 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_1157 RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D RGUI_0571 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGUI_1769 Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rhc00537]
D RGUI_2411 Microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rhc03100]
D RGUI_4136 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4148 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4174 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4157 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4167 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGUI_4162 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4161 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4132 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4176 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4153 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGUI_4139 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D RGUI_4130 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGUI_4131 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGUI_4152 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGUI_4173 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D RGUI_4147 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D RGUI_4180 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4171 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4181 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4177 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D RGUI_4179 tRNA-His K14226 tRNA-His; tRNA His
D RGUI_4137 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4156 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4166 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D RGUI_4129 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4178 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4145 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4127 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4149 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGUI_4154 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D RGUI_4175 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4160 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4170 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4172 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGUI_4143 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D RGUI_4146 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4164 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4133 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D RGUI_4183 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4182 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4141 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4126 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGUI_4151 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4128 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4142 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D RGUI_4163 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D RGUI_4140 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_4144 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_4150 tRNA-Val K14237 tRNA-Val; tRNA Val
D RGUI_4138 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4155 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D RGUI_4135 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4168 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D RGUI_4134 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4159 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D RGUI_4169 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RGUI_3927 5-keto-D-gluconate 5-reductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D RGUI_3129 3-hydroxyacyl-CoA dehydrogenase K27497 K27497; carnitine 3-dehydrogenase / betainyl-CoA thioesterase [EC:1.1.1.108 3.1.2.33]
D RGUI_3961 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D RGUI_3922 Nucleoside-diphosphate-sugar epimerase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D RGUI_4076 2-hydroxy-3-oxopropionate reductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D RGUI_0300 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RGUI_2703 putative oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D RGUI_1997 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D RGUI_2623 Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RGUI_1833 Carbon monoxide dehydrogenase small chain K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D RGUI_2621 Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RGUI_1831 Carbon monoxide dehydrogenase medium chain K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D RGUI_2622 Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RGUI_1832 Carbon monoxide dehydrogenase large chain K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RGUI_1165 putative hypoxanthine oxidase XdhD K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D RGUI_3878 Indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D RGUI_3877 Indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D RGUI_4084 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RGUI_2168 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RGUI_0970 Pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RGUI_4362 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RGUI_2609 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RGUI_1794 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RGUI_4244 Isoquinoline 1-oxidoreductase alpha subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D RGUI_4363 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RGUI_2610 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RGUI_1795 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RGUI_4245 Isoquinoline 1-oxidoreductase beta subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D RGUI_3076 putative reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D RGUI_1440 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RGUI_2055 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D RGUI_3514 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGUI_0687 Oxidoreductase, zinc-binding dehydrogenase family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGUI_1428 Quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGUI_2971 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D RGUI_3598 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RGUI_2476 Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RGUI_0746 Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RGUI_1436 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RGUI_1187 Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RGUI_1245 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RGUI_3079 Glutathione S-transferase, omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RGUI_3179 Putative sulfite oxidase subunit YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D RGUI_3513 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RGUI_2584 Cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D RGUI_3892 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGUI_2380 Alkyl hydroperoxide reductase subunit C-like protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGUI_3846 Periplasmic [Fe] hydrogenase large subunit K06441 E1.12.7.2G; ferredoxin hydrogenase gamma subunit [EC:1.12.7.2]
D RGUI_4279 Pirin, N-terminal:Pirin, C-terminal K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGUI_3301 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RGUI_0723 Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D RGUI_0968 Coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RGUI_1770 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGUI_1854 Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGUI_1024 Cyclopropane-fatty-acyl-phospholipid synthase, plant type K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RGUI_3553 hypothetical protein K24666 dsyB; 2-hydroxy-4-(methylsulfanyl)butanoate S-methyltransferase [EC:2.1.1.373]
D RGUI_1204 Methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D RGUI_0551 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RGUI_1007 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D RGUI_2139 GCN5-related N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D RGUI_2860 IAA acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D RGUI_3451 Acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D RGUI_0259 Beta-ketoacyl synthase family protein K14660 nodE; nodulation protein E [EC:2.3.1.-]
D RGUI_1741 Phosphinothricin acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D RGUI_3648 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RGUI_3856 Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RGUI_0745 Hemolysin K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RGUI_1008 hypothetical protein K22310 olsB; L-ornithine Nalpha-acyltransferase [EC:2.3.2.30]
D RGUI_1803 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D RGUI_3871 Molybdenum transport system protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D RGUI_4029 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RGUI_3827 Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGUI_0104 Thiamin biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGUI_2626 Nitrous oxide reductase maturation periplasmic protein NosX K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGUI_2051 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGUI_4077 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D RGUI_3859 Glutamate-ammonia ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RGUI_1525 Selenoprotein O and cysteine-containing s K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RGUI_1661 4-hydroxybenzoyl-CoA thioesterase family active site K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGUI_1341 Phosphoglycerate mutase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D RGUI_3774 Putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGUI_2908 Micrococcal nuclease (thermonuclease) s K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D RGUI_3735 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase K01175 ybfF; esterase [EC:3.1.-.-]
D RGUI_1804 ADP-ribosyl-[dinitrogen reductase] glycohydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D RGUI_1296 D-alanyl-D-alanine carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D RGUI_1644 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGUI_0823 Phage lysin, N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGUI_1328 N-carbamoyl-D-amino acid hydrolase K01459 E3.5.1.77; N-carbamoyl-D-amino-acid hydrolase [EC:3.5.1.77]
D RGUI_1247 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGUI_1248 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGUI_2511 Carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RGUI_0690 Guanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D RGUI_1752 YoaB-like protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D RGUI_0040 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RGUI_0521 ATPase, MoxR family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D RGUI_4078 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D RGUI_2046 Low-specificity L-threonine aldolase K18425 dhaa; 3-hydroxy-D-aspartate aldolase [EC:4.1.3.41]
D RGUI_3943 Altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D RGUI_0335 NAD(P)HX epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RGUI_1329 Threonine dehydratase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D RGUI_4079 Hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RGUI_3209 Glutamine synthetase type I K01949 gmaS; glutamate---methylamine ligase [EC:6.3.4.12]
D RGUI_4269 Acetone carboxylase, alpha subunit K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6]
D RGUI_4270 Acetone carboxylase, beta subunit K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6]
D RGUI_4268 Acetone carboxylase, gamma subunit K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6]
D RGUI_2059 Electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D RGUI_2058 Electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D RGUI_2057 Electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RGUI_1299 Type cbb3 cytochrome oxidase biogenesis protein CcoI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D RGUI_3630 Cation-transporting ATPase, E1-E2 family K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D RGUI_1579 Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D RGUI_3318 Sugar/maltose fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D RGUI_1291 Deacetylase K04768 acuC; acetoin utilization protein AcuC
C 99982 Energy metabolism
D RGUI_3505 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D RGUI_3703 Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D RGUI_1200 Ferredoxin, 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D RGUI_1920 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D RGUI_2060 Electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D RGUI_2061 Electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D RGUI_2056 Electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D RGUI_2009 Iron-sulfur cluster assembly scaffold protein NifU K13819 K13819; NifU-like protein
D RGUI_3156 Nitrogenase FeMo-cofactor synthesis molybdenum delivery protein NifQ K15790 nifQ; nitrogen fixation protein NifQ
D RGUI_1447 TcuB: works with TcuA to oxidize tricarballylate to cis-aconitate K13796 cobZ; tricarballylate dehydrogenase
D RGUI_2044 Rubisco activation protein CbbO K02448 norD; nitric oxide reductase NorD protein
D RGUI_2043 Rubisco activation protein CbbQ K04748 norQ; nitric oxide reductase NorQ protein
D RGUI_2014 Nitrogenase FeMo-cofactor carrier protein NifX K02596 nifX; nitrogen fixation protein NifX
D RGUI_2357 NifT protein K02593 nifT; nitrogen fixation protein NifT
D RGUI_2356 NifZ protein K02597 nifZ; nitrogen fixation protein NifZ
D RGUI_2353 Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB K02585 nifB; nitrogen fixation protein NifB
D RGUI_2015 Nitrogenase FeMo-cofactor scaffold and assembly protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN
D RGUI_2016 Nitrogenase FeMo-cofactor scaffold and assembly protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D RGUI_2902 Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D RGUI_2006 hypothetical protein K03855 fixX; ferredoxin like protein
D RGUI_2007 Nitrogenase stabilizing/protective protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein
D RGUI_3529 hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RGUI_4006 Arginine/ornithine antiporter ArcD K06203 cysZ; CysZ protein
D RGUI_3298 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RGUI_0543 Phosphate transport regulator (distant of PhoU) K08992 lapA; lipopolysaccharide assembly protein A
C 99987 Cofactor metabolism
D RGUI_4258 CobW GTPase involved in cobalt insertion for B12 biosynthesis K02234 cobW; cobalamin biosynthesis protein CobW
D RGUI_2423 Uncharacterized protein EC-HemY K02498 hemY; HemY protein
D RGUI_2244 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RGUI_1935 Sterol binding protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D RGUI_3701 Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D RGUI_1974 putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) K06049 bchO; magnesium chelatase accessory protein
D RGUI_1429 hypothetical protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D RGUI_4022 Putative oligoketide cyclase/lipid transport protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
D RGUI_2864 NADPH-dependent FMN reductase domain protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D RGUI_3082 putative membrane protein K15977 K15977; putative oxidoreductase
D RGUI_1167 hypothetical protein K15977 K15977; putative oxidoreductase
D RGUI_0904 Phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RGUI_1819 Cold shock protein CspA K03704 cspA; cold shock protein
D RGUI_3982 Cold shock protein CspA K03704 cspA; cold shock protein
D RGUI_1488 Cold shock protein CspB K03704 cspA; cold shock protein
D RGUI_2600 Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D RGUI_1928 mRNA 3-end processing factor K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RGUI_3215 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RGUI_0334 Cell division trigger factor K03545 tig; trigger factor
D RGUI_3180 Membrane protein YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D RGUI_3412 Urease accessory protein UreE K03187 ureE; urease accessory protein
D RGUI_3413 Urease accessory protein UreF K03188 ureF; urease accessory protein
D RGUI_3414 Urease accessory protein UreG K03189 ureG; urease accessory protein
D RGUI_3403 Urease accessory protein UreD K03190 ureD; urease accessory protein
D RGUI_2539 Nickel-binding accessory protein UreJ-HupE K03192 ureJ; urease accessory protein
D RGUI_2579 HupE-UreJ family metal transporter K03192 ureJ; urease accessory protein
D RGUI_3350 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RGUI_2542 Hydrogenase maturation protein HupF/HypC/HoxL K04653 hypC; hydrogenase expression/formation protein HypC
D RGUI_2550 [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D RGUI_0683 [NiFe] hydrogenase metallocenter assembly protein HypC K04653 hypC; hydrogenase expression/formation protein HypC
D RGUI_2551 [NiFe] hydrogenase metallocenter assembly protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D RGUI_2552 [NiFe] hydrogenase metallocenter assembly protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D RGUI_2536 [NiFe] hydrogenase metallocenter assembly protein HypF K04656 hypF; hydrogenase maturation protein HypF
D RGUI_1629 Mg(2+) chelatase family protein K07391 comM; magnesium chelatase family protein
D RGUI_3622 hypothetical protein K07395 K07395; putative proteasome-type protease
D RGUI_3417 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) K07402 xdhC; xanthine dehydrogenase accessory factor
D RGUI_1835 Carbon monoxide dehydrogenase F protein K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D RGUI_2555 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RGUI_2320 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RGUI_1631 Endonuclease K07460 yraN; putative endonuclease
D RGUI_3260 nucleotide-binding protein K04096 smf; DNA processing protein
D RGUI_1353 Holliday junction DNA helicase K07478 ycaJ; putative ATPase
D RGUI_0460 Mobile element protein K07481 K07481; transposase, IS5 family
D RGUI_0042 Mobile element protein K07481 K07481; transposase, IS5 family
D RGUI_0062 Mobile element protein K07481 K07481; transposase, IS5 family
D RGUI_3820 hypothetical protein K07483 K07483; transposase
D RGUI_4340 Mobile element protein K07483 K07483; transposase
D RGUI_2729 Mobile element protein K07483 K07483; transposase
D RGUI_1069 Mobile element protein K07483 K07483; transposase
D RGUI_2422 Mobile element protein K07484 K07484; transposase
D RGUI_2415 Mobile element protein K07486 K07486; transposase
D RGUI_1705 Mobile element protein K07486 K07486; transposase
D RGUI_3572 Mobile element protein K07486 K07486; transposase
D RGUI_3818 Mobile element protein K07486 K07486; transposase
D RGUI_2730 Mobile element protein K07497 K07497; putative transposase
D RGUI_2736 Transposase K07497 K07497; putative transposase
D RGUI_1070 Mobile element protein K07497 K07497; putative transposase
D RGUI_4339 Mobile element protein K07497 K07497; putative transposase
D RGUI_2412 Mobile element protein K07497 K07497; putative transposase
D RGUI_0810 Mobile element protein K07497 K07497; putative transposase
D RGUI_2732 Mobile element protein K07497 K07497; putative transposase
D RGUI_0215 Transposase K07497 K07497; putative transposase
D RGUI_1071 Integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D RGUI_2919 Prophage Lp2 protein 6 K07504 K07504; predicted type IV restriction endonuclease
D RGUI_1316 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RGUI_2315 Sugar transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGUI_1027 High-affinity choline uptake protein BetT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D RGUI_4308 putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D RGUI_2608 Sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D RGUI_0484 Sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D RGUI_1190 Intracellular septation protein A K06190 ispZ; intracellular septation protein
D RGUI_3115 Peptidase, M23/M37 family K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D RGUI_2124 Universal stress family protein K14061 uspF; universal stress protein F
D RGUI_1028 hypothetical protein K11932 uspG; universal stress protein G
D RGUI_3537 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D RGUI_2319 hypothetical protein K07167 chrR; putative transcriptional regulator
D RGUI_0555 Phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RGUI_4345 putative signal-transduction protein containing cAMP-binding and CBS domain K07182 K07182; CBS domain-containing protein
D RGUI_3972 putative signal-transduction protein containing cAMP-binding and CBS domain K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D RGUI_2151 Lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RGUI_1269 Capsular polysaccharide export system protein KpsS K07265 kpsS; capsular polysaccharide export protein
D RGUI_1270 Capsular polysaccharide export system protein KpsS K07265 kpsS; capsular polysaccharide export protein
D RGUI_3325 Protein fixF K07265 kpsS; capsular polysaccharide export protein
D RGUI_3164 Beta-1,3-glucosyltransferase K07266 kpsC; capsular polysaccharide export protein
D RGUI_1806 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) K07273 acm; lysozyme
D RGUI_0508 Putative activity regulator of membrane protease YbbK K07340 ybbJ; inner membrane protein
D RGUI_3593 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG K01993 ABC-2.TX; HlyD family secretion protein
D RGUI_0585 putative RND efflux membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D RGUI_1772 Putative transport protein K11744 tqsA; AI-2 transport protein TqsA
D RGUI_4088 Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RGUI_0409 Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGUI_1555 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGUI_4073 Gas vesicle structural protein (GVP) K23262 gvpA; gas vesicle structural protein
C 99994 Others
D RGUI_0286 Phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D RGUI_0639 Phosphonates transport ATP-binding protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D RGUI_0710 hypothetical protein K07219 K07219; putative molybdopterin biosynthesis protein
D RGUI_0068 Hemin transport protein K07225 hmuS; putative hemin transport protein
D RGUI_2590 Iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RGUI_1849 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RGUI_3664 Paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D RGUI_0971 Coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RGUI_0969 Coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RGUI_4034 Protein secretion chaperonin CsaA K06878 K06878; tRNA-binding protein
D RGUI_0276 Ferredoxin reductase K07001 K07001; NTE family protein
D RGUI_3378 Pyridoxal-5'-phosphate phosphatase, Alphaproteobacterial type K07025 K07025; putative hydrolase of the HAD superfamily
D RGUI_3546 Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D RGUI_3549 Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D RGUI_2394 Ribonuclease BN K07058 K07058; membrane protein
D RGUI_1444 Protein-L-isoaspartate O-methyltransferase K07100 K07100; putative phosphoribosyl transferase
D RGUI_2454 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D RGUI_3487 Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D RGUI_2691 Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup K07146 K07146; UPF0176 protein
D RGUI_1606 SlyX protein K03745 slyX; SlyX protein
D RGUI_0446 Conserved uncharacterized protein CreA K05805 creA; CreA protein
D RGUI_3665 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RGUI_3666 Paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D RGUI_0473 Cation/multidrug efflux pump K00389 yidH; putative membrane protein
D RGUI_1790 GTP-binding protein K08990 ycjF; putative membrane protein
D RGUI_2544 Hydrogenase maturation factor HoxQ K03618 hyaF; hydrogenase-1 operon protein HyaF
D RGUI_2543 Hydrogenase maturation factor HoxO/HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE
D RGUI_1638 Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D RGUI_3771 hypothetical protein K06867 K06867; uncharacterized protein
D RGUI_4108 Quinohemoprotein amine dehydrogenase radical SAM maturase K06871 K06871; uncharacterized protein
D RGUI_0739 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D RGUI_0684 membrane protein K06890 K06890; uncharacterized protein
D RGUI_3681 hypothetical protein K06903 W; Bacteriophage baseplate protein W
D RGUI_3689 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D RGUI_3691 Phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein
D RGUI_1791 amino acid regulated cytosolic protein K06918 K06918; uncharacterized protein
D RGUI_1870 ATP-dependent protease subunit K06923 K06923; uncharacterized protein
D RGUI_3763 O-acetylhomoserine sulfhydrylase K06929 K06929; uncharacterized protein
D RGUI_1557 hypothetical protein K06938 K06938; uncharacterized protein
D RGUI_3787 ICC-like protein phosphoesterase K06953 K06953; uncharacterized protein
D RGUI_2317 Amine oxidase, flavin-containing K06954 K06954; uncharacterized protein
D RGUI_4355 hypothetical protein K06971 K06971; uncharacterized protein
D RGUI_0730 putative deacylase K06987 K06987; uncharacterized protein
D RGUI_0714 putative hydroxylase K06996 K06996; uncharacterized protein
D RGUI_3027 Alkaline phosphatase K07004 K07004; uncharacterized protein
D RGUI_3543 Alpha/beta hydrolase K07018 K07018; uncharacterized protein
D RGUI_3595 hypothetical protein K07028 K07028; uncharacterized protein
D RGUI_1114 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RGUI_1121 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RGUI_3010 TRAP transporter solute receptor, TAXI family precursor K07080 K07080; uncharacterized protein
D RGUI_2957 Transporter K07089 K07089; uncharacterized protein
D RGUI_1581 Transporter K07089 K07089; uncharacterized protein
D RGUI_0354 hypothetical protein K07090 K07090; uncharacterized protein
D RGUI_2686 hypothetical protein K07090 K07090; uncharacterized protein
D RGUI_0203 hypothetical protein K07090 K07090; uncharacterized protein
D RGUI_0602 membrane protein, putative K07090 K07090; uncharacterized protein
D RGUI_0603 membrane protein, putative K07090 K07090; uncharacterized protein
D RGUI_0624 Integal membrane protein (Rhomboid family) K07090 K07090; uncharacterized protein
D RGUI_2889 membrane protein K07090 K07090; uncharacterized protein
D RGUI_1558 membrane protein K07090 K07090; uncharacterized protein
D RGUI_1284 hypothetical protein K07092 K07092; uncharacterized protein
D RGUI_1567 Alkaline phosphatase K07093 K07093; uncharacterized protein
D RGUI_3419 Lipocalin-related protein and Bos/Can/Equ allergen K07112 K07112; uncharacterized protein
D RGUI_1034 hypothetical protein K07112 K07112; uncharacterized protein
D RGUI_3600 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RGUI_3218 hypothetical protein K07120 K07120; uncharacterized protein
D RGUI_2631 hypothetical protein K07126 K07126; uncharacterized protein
D RGUI_3193 hypothetical protein K07133 K07133; uncharacterized protein
D RGUI_2792 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D RGUI_1822 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein
D RGUI_1836 carbon monoxide dehydrogenase E protein K07161 K07161; uncharacterized protein
D RGUI_2789 Protein YidD K08998 K08998; uncharacterized protein
D RGUI_3127 hypothetical protein K09004 K09004; uncharacterized protein
D RGUI_1487 exported protein K09005 K09005; uncharacterized protein
D RGUI_1149 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D RGUI_4008 hypothetical protein K09131 K09131; uncharacterized protein
D RGUI_1405 hypothetical protein K09160 K09160; uncharacterized protein
D RGUI_2624 Carbon monoxide oxidation accessory protein CoxG K09386 K09386; uncharacterized protein
D RGUI_2316 Hypothetical protein K09701 K09701; uncharacterized protein
D RGUI_1532 hypothetical protein K09705 K09705; uncharacterized protein
D RGUI_2155 ElaA protein K09768 K09768; uncharacterized protein
D RGUI_2428 YciL protein K09780 K09780; uncharacterized protein
D RGUI_1995 Membrane protein K09781 K09781; uncharacterized protein
D RGUI_2486 hypothetical protein K09790 K09790; uncharacterized protein
D RGUI_1821 Protein YcaR in KDO2-Lipid A biosynthesis cluster K09791 K09791; uncharacterized protein
D RGUI_1757 hypothetical protein K09794 K09794; uncharacterized protein
D RGUI_2121 Integral membrane protein K09799 K09799; uncharacterized protein
D RGUI_2062 hypothetical protein K09801 K09801; uncharacterized protein
D RGUI_4215 hypothetical protein K09803 K09803; uncharacterized protein
D RGUI_3984 hypothetical protein K09803 K09803; uncharacterized protein
D RGUI_1916 Protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D RGUI_3663 hypothetical protein K09857 K09857; uncharacterized protein
D RGUI_2345 UPF0246 protein YaaA K09861 K09861; uncharacterized protein
D RGUI_1135 hypothetical protein K09862 K09862; uncharacterized protein
D RGUI_2148 hypothetical protein K09919 K09919; uncharacterized protein
D RGUI_1785 hypothetical protein K09921 K09921; uncharacterized protein
D RGUI_2876 hypothetical protein K09928 K09928; uncharacterized protein
D RGUI_1169 hypothetical protein K09930 K09930; uncharacterized protein
D RGUI_1206 Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D RGUI_2587 putative exported protein K09947 K09947; uncharacterized protein
D RGUI_3150 hypothetical protein K09948 K09948; uncharacterized protein
D RGUI_0537 hypothetical protein K09966 K09966; uncharacterized protein
D RGUI_0613 hypothetical protein K09967 K09967; uncharacterized protein
D RGUI_3338 hypothetical protein K09982 K09982; uncharacterized protein
D RGUI_1040 hypothetical protein K09985 K09985; uncharacterized protein
D RGUI_0523 Proteophosphoglycan precursor-like protein K09986 K09986; uncharacterized protein
D RGUI_1324 hypothetical protein K09987 K09987; uncharacterized protein
D RGUI_0778 hypothetical protein K09989 K09989; uncharacterized protein
D RGUI_2588 Iron-regulated protein A precursor K07338 K07338; uncharacterized protein
D RGUI_2518 putative nucleic-acid-binding protein implicated in transcription termination K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024