+D GENES KO
#
KEGG Orthology (KO) - Rufibacter sp. DG15C
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:rud00010]
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D TH61_10240 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_05065 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D TH61_16835 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02230 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02705 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TH61_06215 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TH61_04235 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TH61_13170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TH61_17520 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TH61_13385 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TH61_06035 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TH61_11255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15980 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_06565 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TH61_13725 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TH61_13380 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_00775 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_08455 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TH61_17405 HAD family hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_15395 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:rud00020]
D TH61_15585 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TH61_17660 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TH61_03570 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TH61_07095 isocitrate dehydrogenase K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D TH61_04520 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TH61_10460 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_04515 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_03380 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D TH61_17545 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TH61_17725 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TH61_17730 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TH61_17720 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TH61_06310 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TH61_01850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TH61_14235 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D TH61_13425 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D TH61_15395 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D TH61_06565 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TH61_13725 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TH61_13380 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:rud00030]
D TH61_10240 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TH61_02980 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D TH61_14780 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D TH61_17015 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TH61_17025 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TH61_13585 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D TH61_05885 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D TH61_09835 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_02955 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TH61_09925 sugar dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D TH61_02705 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TH61_06215 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TH61_16835 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02230 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_05065 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:rud00040]
D TH61_11400 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TH61_14780 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:rud00051]
D TH61_17225 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TH61_07780 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TH61_11220 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_05065 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D TH61_16835 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02230 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02705 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TH61_06215 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TH61_04235 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TH61_05885 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:rud00052]
D TH61_08455 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D TH61_08430 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TH61_08425 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TH61_07295 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D TH61_17240 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TH61_09820 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_05065 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:rud00053]
D TH61_11400 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TH61_10160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:rud00500]
D TH61_02755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_03455 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_06735 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TH61_16600 glycogen synthase K00693 GYS; glycogen synthase [EC:2.4.1.11]
D TH61_16590 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D TH61_16585 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TH61_16540 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D TH61_16550 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D TH61_16535 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D TH61_05215 alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D TH61_02165 alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D TH61_16515 maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D TH61_16510 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D TH61_15580 glycogen debranching protein K01214 ISA; isoamylase [EC:3.2.1.68]
D TH61_15575 malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D TH61_03075 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D TH61_17620 trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D TH61_10240 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:rud00520]
D TH61_01880 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TH61_11635 glycoside hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TH61_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_17255 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_05060 hypothetical protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D TH61_06725 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TH61_04445 N-acetylmuramic acid-6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D TH61_07195 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D TH61_13260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TH61_13215 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TH61_13615 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D TH61_13610 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D TH61_07285 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D TH61_07305 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D TH61_07290 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TH61_03460 xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_11400 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TH61_08430 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TH61_08425 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D TH61_07295 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TH61_09820 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D TH61_10160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TH61_10240 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TH61_17225 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TH61_07780 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TH61_11220 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:rud00620]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_06565 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TH61_13725 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TH61_13380 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_00775 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TH61_11255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15980 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15435 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TH61_13290 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TH61_13285 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_03955 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TH61_00210 sulfurtransferase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TH61_05825 sulfurtransferase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D TH61_03900 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D TH61_13425 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D TH61_01850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TH61_14235 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D TH61_06310 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D TH61_15395 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:rud00630]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_01850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TH61_15585 gltA; type II citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D TH61_17660 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_00745 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D TH61_01670 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D TH61_02075 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_02090 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_00310 catalase K03781 katE; catalase [EC:1.11.1.6]
D TH61_01360 hypothetical protein K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]
D TH61_01290 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_05895 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TH61_04620 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D TH61_02385 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_03915 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:rud00640]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_15030 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_04670 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_15435 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TH61_13290 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TH61_13285 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TH61_01670 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D TH61_00745 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D TH61_02075 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_02090 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_17545 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TH61_03380 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:rud00650]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_14485 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_08580 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_06720 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_04415 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_07615 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_17725 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TH61_17730 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TH61_17720 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TH61_17150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TH61_01360 hypothetical protein K18121 GLYR; glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]
D TH61_15760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TH61_13785 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D TH61_13775 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D TH61_17545 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D TH61_03380 succinate--CoA ligase K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:rud00562]
D TH61_05940 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TH61_11610 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D TH61_04235 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:rud00190]
D TH61_03805 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TH61_04780 NADH dehydrogenase K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D TH61_03800 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D TH61_03795 NADH dehydrogenase K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D TH61_04805 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TH61_03790 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D TH61_03785 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D TH61_03780 NADH dehydrogenase K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D TH61_00940 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TH61_03770 NADH:ubiquinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D TH61_03765 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D TH61_11955 hypothetical protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TH61_03760 NADH dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D TH61_11960 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TH61_03755 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D TH61_03750 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D TH61_03745 NADH dehydrogenase K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D TH61_11975 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TH61_03740 NADH dehydrogenase K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D TH61_09935 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D TH61_17725 sdhA; succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D TH61_17730 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D TH61_17720 succinate dehydrogenase K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D TH61_01225 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TH61_01210 membrane protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D TH61_01215 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D TH61_01220 cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D TH61_15690 hypothetical protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D TH61_01235 cytochrome C oxidase K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D TH61_01230 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D TH61_12035 bifunctional cbb3-type cytochrome c oxidase subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D TH61_12045 cytochrome c class i K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TH61_04845 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TH61_02940 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TH61_04840 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TH61_04850 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TH61_02935 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TH61_04865 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TH61_04855 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TH61_04860 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TH61_04830 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D TH61_10245 hypothetical protein K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D TH61_08735 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TH61_16475 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:rud00680]
D TH61_05895 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TH61_01850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TH61_02705 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D TH61_06215 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D TH61_16835 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02230 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_05065 phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D TH61_06835 CoB--CoM heterodisulfide reductase K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_13385 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TH61_06035 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TH61_13340 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04710 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04705 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02135 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_09245 phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D TH61_02380 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D TH61_09780 malate dehydrogenase K05884 comC; L-2-hydroxycarboxylate dehydrogenase (NAD+) [EC:1.1.1.337]
C 00910 Nitrogen metabolism [PATH:rud00910]
D TH61_17335 nitrous oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D TH61_07260 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_06495 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_15605 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D TH61_17175 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:rud00920]
D TH61_09040 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D TH61_12325 FAD-binding oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D TH61_00435 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TH61_02850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TH61_02845 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TH61_03065 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D TH61_16705 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D TH61_03055 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:rud00061]
D TH61_15435 acetyl-CoA carboxyl transferase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D TH61_13290 acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D TH61_13285 acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D TH61_12370 hypothetical protein K02078 acpP; acyl carrier protein
D TH61_11265 acyl carrier protein K02078 acpP; acyl carrier protein
D TH61_08625 acyl carrier protein K02078 acpP; acyl carrier protein
D TH61_17710 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TH61_13300 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_14470 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_16030 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_11270 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_16685 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_07820 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_11885 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_10490 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D TH61_01800 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TH61_06180 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D TH61_02295 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D TH61_04425 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:rud00071]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_04415 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TH61_10910 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D TH61_04425 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:rud00561]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_00775 hydroxyacid dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D TH61_03405 hypothetical protein K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42]
D TH61_13305 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TH61_04210 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TH61_06335 hypothetical protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:rud00564]
D TH61_14965 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D TH61_03375 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D TH61_03405 hypothetical protein K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42]
D TH61_04210 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D TH61_06335 hypothetical protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D TH61_07255 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D TH61_03960 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TH61_07265 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D TH61_11615 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D TH61_06530 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:rud00600]
D TH61_05250 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D TH61_05255 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D TH61_17240 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TH61_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_17255 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D TH61_14355 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D TH61_12240 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:rud00592]
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:rud01040]
D TH61_10290 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D TH61_02295 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D TH61_15855 GDSL family lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:rud00230]
D TH61_11650 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TH61_02650 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_02955 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D TH61_11980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TH61_11235 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D TH61_03165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TH61_02945 phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D TH61_03965 phosphoribosylformylglycinamidine synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D TH61_03940 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TH61_06860 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D TH61_11835 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D TH61_11840 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D TH61_16715 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D TH61_01075 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TH61_03160 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TH61_02045 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TH61_00905 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TH61_11495 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D TH61_10050 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TH61_09045 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TH61_12495 inositol monophosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D TH61_11035 deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D TH61_09295 aldehyde oxidase K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D TH61_09300 FAD-binding molybdopterin dehydrogenase K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D TH61_09305 2Fe-2S ferredoxin K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D TH61_13570 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TH61_13650 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D TH61_09460 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D TH61_05670 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TH61_05665 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TH61_06090 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D TH61_01120 MFS transporter K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TH61_16470 phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TH61_09795 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D TH61_01105 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TH61_01470 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D TH61_16140 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D TH61_03290 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D TH61_11500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TH61_00325 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
C 00240 Pyrimidine metabolism [PATH:rud00240]
D TH61_07430 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TH61_09725 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TH61_02520 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TH61_04030 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TH61_04130 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D TH61_10385 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D TH61_14000 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D TH61_10400 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D TH61_09480 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D TH61_09045 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TH61_14960 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D TH61_13975 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D TH61_03280 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D TH61_11030 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D TH61_02045 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TH61_10425 phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D TH61_04145 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D TH61_02515 PyrR protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TH61_11045 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TH61_02175 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D TH61_11335 cytidine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TH61_13550 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D TH61_05670 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TH61_05665 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TH61_01470 deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D TH61_07625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TH61_03110 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D TH61_15170 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TH61_02195 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:rud00250]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_16410 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D TH61_14340 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_06810 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_11395 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TH61_08780 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D TH61_10540 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TH61_16130 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TH61_12645 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D TH61_10765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TH61_10735 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TH61_01105 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D TH61_01075 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D TH61_02520 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D TH61_17150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TH61_07260 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_06495 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_03700 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_07430 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D TH61_09725 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D TH61_03940 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TH61_06725 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TH61_11980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:rud00260]
D TH61_16690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_02235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_09135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TH61_15105 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D TH61_13990 threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D TH61_08490 amino acid lyase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D TH61_05895 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TH61_13385 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D TH61_06035 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D TH61_13340 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04710 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04705 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02135 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02195 malonic semialdehyde reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D TH61_14700 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TH61_08340 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TH61_04620 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D TH61_02385 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_03915 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D TH61_03960 hypothetical protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D TH61_03310 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D TH61_02765 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D TH61_14980 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TH61_04750 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TH61_00770 serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TH61_15935 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TH61_15940 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:rud00270]
D TH61_02850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D TH61_02845 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D TH61_02765 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D TH61_03310 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D TH61_03215 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TH61_09195 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TH61_14160 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TH61_07270 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D TH61_09430 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TH61_07515 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D TH61_16690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_02235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_09135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TH61_03065 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D TH61_16705 homoserine acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D TH61_16710 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D TH61_03055 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D TH61_12575 amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_01930 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_00435 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TH61_01850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D TH61_14980 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TH61_04750 serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D TH61_13340 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04710 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04705 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02135 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:rud00280]
D TH61_12575 amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_01930 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_07075 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D TH61_15030 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_04670 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TH61_01670 methylmalonyl-CoA carboxyltransferase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D TH61_00745 hypothetical protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D TH61_02075 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_02090 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_10320 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D TH61_00105 methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D TH61_15760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TH61_13785 succinyl-CoA:3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D TH61_13775 succinyl-CoA:3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:rud00290]
D TH61_00770 serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D TH61_12575 amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_01930 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_07075 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:rud00300]
D TH61_16690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_02235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_09135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TH61_15750 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TH61_13945 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D TH61_14480 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D TH61_10755 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TH61_09805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TH61_16695 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D TH61_00015 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TH61_08765 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TH61_07565 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
C 00310 Lysine degradation [PATH:rud00310]
D TH61_09865 aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D TH61_10460 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_04515 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_10910 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_17150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:rud00220]
D TH61_10765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TH61_10735 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TH61_01040 arginase K01476 rocF; arginase [EC:3.5.3.1]
D TH61_03940 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_07260 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_06495 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_10745 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D TH61_10760 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D TH61_10755 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TH61_10740 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:rud00330]
D TH61_11335 cytidine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D TH61_01045 decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D TH61_14165 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D TH61_14160 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_09810 acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D TH61_12565 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TH61_01040 arginase K01476 rocF; arginase [EC:3.5.3.1]
D TH61_08230 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D TH61_01710 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D TH61_03700 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D TH61_16780 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_17505 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_09875 hypothetical protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:rud00340]
D TH61_14795 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D TH61_14830 phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D TH61_14820 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D TH61_14815 hisH; imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D TH61_14825 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D TH61_14810 imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TH61_14800 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D TH61_13755 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D TH61_12450 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D TH61_12455 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D TH61_12460 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D TH61_04430 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_14095 methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:rud00350]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TH61_16750 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D TH61_08180 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D TH61_10550 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D TH61_13360 hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D TH61_17150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:rud00360]
D TH61_15920 hypothetical protein K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D TH61_15925 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D TH61_13360 hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D TH61_00650 phenylacetic acid degradation b K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D TH61_00655 phenylacetate-CoA oxygenase K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D TH61_00660 phenylacetate-CoA oxygenase K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D TH61_16860 oxidoreductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D TH61_00675 hypothetical protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D TH61_07970 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_14485 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_08580 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_06720 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TH61_16750 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D TH61_12565 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:rud00380]
D TH61_14985 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D TH61_07890 kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D TH61_07870 kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D TH61_07830 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D TH61_07810 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D TH61_09900 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D TH61_10460 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_04515 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_10910 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_13360 hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_12565 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TH61_00310 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:rud00400]
D TH61_15930 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D TH61_01700 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D TH61_02130 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D TH61_08380 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D TH61_01695 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D TH61_10995 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D TH61_15965 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TH61_15955 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D TH61_14765 hypothetical protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TH61_15945 hypothetical protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D TH61_15950 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D TH61_15935 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D TH61_15940 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D TH61_01705 cytochrome C4 K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TH61_15920 hypothetical protein K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D TH61_15925 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:rud00410]
D TH61_06745 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D TH61_06740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00430 Taurine and hypotaurine metabolism [PATH:rud00430]
D TH61_12985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_01755 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_10540 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D TH61_16130 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D TH61_17100 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:rud00450]
D TH61_03215 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TH61_02765 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D TH61_11310 ferredoxin-NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TH61_14680 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D TH61_02990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:rud00460]
D TH61_02755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_03455 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_12985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_01755 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_16410 1-alkyl-2-acetylglycerophosphocholine esterase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D TH61_14340 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_06810 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_05895 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:rud00470]
D TH61_07565 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D TH61_17430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TH61_03940 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D TH61_00975 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D TH61_10875 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D TH61_06430 mandelate racemase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D TH61_09805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D TH61_16695 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:rud00480]
D TH61_12985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_01755 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_12510 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D TH61_13325 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TH61_12490 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TH61_12300 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D TH61_03570 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D TH61_01030 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TH61_00335 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D TH61_14160 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:rud00511]
D TH61_17240 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D TH61_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_17255 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_17265 glycosylasparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D TH61_05250 glycosyl hydrolase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D TH61_05255 glucosylceramidase K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:rud00540]
D TH61_10485 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TH61_10490 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D TH61_10495 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TH61_11180 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TH61_01145 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TH61_11225 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TH61_13920 2-dehydro-3-deoxyphosphogluconate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TH61_09005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TH61_13185 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TH61_02250 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TH61_01650 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TH61_04170 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TH61_11815 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D TH61_01050 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TH61_01165 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TH61_12615 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D TH61_15765 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:rud00542]
D TH61_04930 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:rud00541]
D TH61_07295 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D TH61_09820 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D TH61_11400 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D TH61_10160 capsule biosynthesis protein CapI K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D TH61_07310 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_06190 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07630 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07300 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_11405 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_08760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TH61_11080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D TH61_17225 phosphoheptose isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D TH61_07780 phosphoglucosamine mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D TH61_11220 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D TH61_07290 UDP-N-acetyl-D-galactosamine dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D TH61_13615 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D TH61_13610 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D TH61_07285 hexapeptide transferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D TH61_07305 Vi polysaccharide biosynthesis protein VipB/TviC K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:rud00550]
D TH61_13260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TH61_13215 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TH61_17755 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TH61_17430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TH61_00015 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TH61_08765 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TH61_07565 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D TH61_07715 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TH61_13805 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_15040 PA-phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_17760 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TH61_14540 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TH61_04885 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_10130 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_13145 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TH61_03135 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TH61_07350 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TH61_15545 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:rud00552]
D TH61_13805 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_15040 PA-phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_04930 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:rud00543]
D TH61_04930 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TH61_13660 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D TH61_02850 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:rud00730]
D TH61_07785 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00750 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_03950 hypothetical protein K03153 thiO; glycine oxidase [EC:1.4.3.19]
D TH61_09085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TH61_00635 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D TH61_02255 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TH61_11500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:rud00740]
D TH61_10590 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TH61_07275 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TH61_06575 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D TH61_15045 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D TH61_13795 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D TH61_11650 hypothetical protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D TH61_02650 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:rud00750]
D TH61_14950 hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D TH61_04705 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02135 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_07670 pyridoxamine 5'-phosphate oxidase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D TH61_15105 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:rud00760]
D TH61_06045 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D TH61_15125 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D TH61_00905 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D TH61_02045 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D TH61_09465 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D TH61_11280 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D TH61_10815 decaheme cytochrome c MtrA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D TH61_15130 isochorismatase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D TH61_14110 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D TH61_07700 ppnK; inorganic polyphosphate kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D TH61_17150 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:rud00770]
D TH61_10300 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D TH61_06740 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D TH61_06610 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D TH61_14010 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D TH61_07115 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D TH61_10350 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D TH61_15200 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D TH61_12575 amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_01930 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_06745 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:rud00780]
D TH61_11270 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_16685 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_07820 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_11885 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_01800 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TH61_16670 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TH61_16680 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TH61_16675 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D TH61_11200 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:rud00785]
D TH61_04940 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D TH61_04645 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_06565 pyruvate dehydrogenase K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D TH61_13725 pyruvate dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D TH61_13380 pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D TH61_04520 2-oxoglutarate dehydrogenase K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D TH61_10460 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_04515 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D TH61_15030 tungsten formylmethanofuran dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_04670 dehydrogenase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D TH61_04620 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D TH61_02385 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TH61_03915 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:rud00790]
D TH61_10220 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D TH61_06910 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D TH61_10365 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D TH61_17700 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D TH61_08365 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D TH61_00705 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TH61_14755 dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D TH61_10590 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D TH61_15335 hypothetical protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D TH61_01150 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_01585 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_10225 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_05925 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TH61_15920 hypothetical protein K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D TH61_15925 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D TH61_15595 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TH61_13060 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TH61_13055 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D TH61_13065 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TH61_13035 hypothetical protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D TH61_13075 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D TH61_13050 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:rud00670]
D TH61_00705 hypothetical protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D TH61_15600 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D TH61_05895 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D TH61_03165 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D TH61_03160 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TH61_00700 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TH61_02385 glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D TH61_03215 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D TH61_15170 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D TH61_03220 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D TH61_08275 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:rud00860]
D TH61_06700 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TH61_07210 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TH61_00450 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D TH61_13560 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TH61_08225 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TH61_11070 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D TH61_04920 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D TH61_11820 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D TH61_15035 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D TH61_08195 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D TH61_01055 hypothetical protein K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D TH61_08200 protoporphyrinogen IX oxidase K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D TH61_04480 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D TH61_01225 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TH61_01230 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D TH61_01925 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TH61_02270 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:rud00130]
D TH61_02205 ubiquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D TH61_13395 hypothetical protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
D TH61_13400 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D TH61_14105 chloromuconate cycloisomerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D TH61_13415 acyl-CoA synthetase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D TH61_13410 dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D TH61_13390 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D TH61_01025 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TH61_12020 NmrA family transcriptional regulator K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D TH61_00140 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D TH61_16750 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:rud00900]
D TH61_09085 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D TH61_02000 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D TH61_08065 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D TH61_02905 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D TH61_04685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D TH61_15230 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D TH61_00065 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TH61_03275 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_06465 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TH61_17690 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TH61_07715 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:rud00906]
D TH61_00080 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TH61_00085 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D TH61_00060 fatty acid desaturase K09836 crtW; beta-carotene/zeaxanthin 4-ketolase [EC:1.14.99.63 1.14.99.64]
D TH61_00100 fatty acid hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D TH61_06260 phytoene dehydrogenase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:rud00907]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_15760 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D TH61_17015 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D TH61_17025 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:rud00523]
D TH61_07310 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_06190 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07630 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07300 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_11405 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_08760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TH61_11080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D TH61_13395 hypothetical protein K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D TH61_07300 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_11405 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:rud00946]
D TH61_02755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_03455 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:rud00311]
D TH61_05015 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D TH61_08355 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:rud00261]
D TH61_16690 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_02235 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D TH61_09135 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D TH61_15750 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D TH61_13945 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:rud00521]
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D TH61_16755 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D TH61_11610 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D TH61_05940 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D TH61_07310 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_06190 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07630 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07300 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_11405 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_08760 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D TH61_11080 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D TH61_16485 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:rud00525]
D TH61_07310 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_06190 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07630 nucleotidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D TH61_07300 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D TH61_11405 NAD-dependent dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:rud00401]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:rud00405]
D TH61_17125 hypothetical protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D TH61_15965 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D TH61_17710 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TH61_07820 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_11885 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_01800 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D TH61_12370 hypothetical protein K02078 acpP; acyl carrier protein
D TH61_11265 acyl carrier protein K02078 acpP; acyl carrier protein
D TH61_08625 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:rud00999]
D TH61_09195 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D TH61_02755 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D TH61_03455 beta-D-glucoside glucohydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:rud00362]
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D TH61_07550 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D TH61_07810 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D TH61_04415 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D TH61_10910 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D TH61_14485 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_08580 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_06720 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:rud00627]
D TH61_12565 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:rud00364]
D TH61_12340 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:rud00625]
D TH61_08935 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:rud00361]
D TH61_12340 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D TH61_07550 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:rud00623]
D TH61_12340 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:rud00622]
D TH61_07550 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D TH61_07810 2-hydroxymuconic semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation [PATH:rud00633]
D TH61_07440 NADH:flavin oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D TH61_04410 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:rud00643]
D TH61_08180 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D TH61_10550 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D TH61_12565 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D TH61_07550 glyoxalase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D TH61_02240 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:rud03020]
D TH61_09550 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TH61_09555 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TH61_09715 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:rud03010]
D TH61_13890 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TH61_09945 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TH61_09615 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TH61_09710 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TH61_09670 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TH61_01275 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TH61_09570 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TH61_09655 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TH61_09950 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TH61_09580 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TH61_09705 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TH61_09565 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TH61_09700 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TH61_09650 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TH61_14665 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TH61_10285 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TH61_09630 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TH61_01280 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TH61_09605 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TH61_11250 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TH61_09210 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TH61_09535 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TH61_09600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TH61_09585 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TH61_09590 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TH61_09645 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TH61_09660 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TH61_09545 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TH61_01285 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TH61_09540 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TH61_09530 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TH61_09955 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TH61_09635 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TH61_09680 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TH61_09620 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TH61_09720 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TH61_09665 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TH61_10270 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TH61_14635 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TH61_05660 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TH61_09610 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TH61_09595 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TH61_09640 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TH61_02960 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D TH61_05655 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TH61_08245 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TH61_09625 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TH61_09675 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TH61_11050 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D TH61_13310 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TH61_08255 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TH61_14630 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TH61_01100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_01085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_03990 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_04045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_01080 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_03985 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_04040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:rud00970]
D TH61_01090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_02835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_03995 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_04050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_16630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_02775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_17565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_08705 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_08575 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TH61_15440 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TH61_15450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TH61_13895 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TH61_02950 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TH61_13155 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TH61_13165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TH61_09500 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TH61_08910 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TH61_04115 tRNA-His K14226 tRNA-His; tRNA His
D TH61_01095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_04055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_04000 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_17115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_08915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_10825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_00135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_01125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_00595 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TH61_00600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TH61_14650 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_17400 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_05600 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_06825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TH61_16635 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TH61_07060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TH61_16405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_16640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_01615 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_09505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TH61_14935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TH61_09515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TH61_09495 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TH61_07130 tRNA-Val K14237 tRNA-Val; tRNA Val
D TH61_06700 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TH61_03890 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TH61_15075 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TH61_01910 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TH61_15080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TH61_03715 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TH61_04715 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_07945 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_06425 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TH61_14620 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TH61_02470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TH61_03875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TH61_02990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TH61_00700 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D TH61_10445 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TH61_15220 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TH61_06440 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TH61_01775 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TH61_01035 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TH61_04495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TH61_13760 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TH61_08585 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TH61_03345 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TH61_14710 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TH61_16740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:rud03060]
D TH61_09685 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TH61_09520 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D TH61_15365 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TH61_11020 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D TH61_07105 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TH61_13970 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TH61_09830 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TH61_13645 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TH61_08260 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TH61_03885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D TH61_05890 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D TH61_12075 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TH61_13940 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TH61_06445 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:rud04122]
D TH61_07785 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00750 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00435 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D TH61_14770 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TH61_13065 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D TH61_13060 molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D TH61_13070 molybdopterin converting factor K03636 moaD; sulfur-carrier protein
D TH61_13045 hypothetical protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D TH61_13055 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
C 03018 RNA degradation [PATH:rud03018]
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TH61_14670 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TH61_07390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_15725 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_00395 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_01020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_06460 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TH61_14255 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TH61_14175 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_11230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_14395 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_17525 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_02465 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TH61_03360 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TH61_08735 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TH61_16475 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TH61_00740 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:rud03030]
D TH61_08350 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_16985 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_14580 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_11855 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_05560 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_02590 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TH61_03660 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TH61_11065 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TH61_14720 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TH61_13535 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TH61_16975 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TH61_10575 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_02150 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TH61_02405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:rud03410]
D TH61_04280 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TH61_02675 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TH61_13935 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D TH61_04330 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TH61_09415 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D TH61_08840 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TH61_15800 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D TH61_16920 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TH61_06380 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_06650 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:rud03420]
D TH61_08815 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TH61_04225 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TH61_12780 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TH61_09280 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TH61_04890 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TH61_13270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:rud03430]
D TH61_08905 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TH61_13210 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D TH61_01875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TH61_13270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TH61_01510 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TH61_06650 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_02590 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TH61_13535 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TH61_03660 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TH61_14720 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TH61_11065 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TH61_08350 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_16985 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_14580 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_11855 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_05560 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:rud03440]
D TH61_06650 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_06560 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D TH61_09025 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D TH61_11800 recombinase RecR K06187 recR; recombination protein RecR
D TH61_09980 recombinase RecA K03553 recA; recombination protein RecA
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_03905 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TH61_10965 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TH61_16450 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TH61_04375 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TH61_02590 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TH61_13535 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TH61_03660 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TH61_14720 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TH61_11065 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TH61_08350 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_16985 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_14580 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_11855 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_05560 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_01305 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:rud02010]
D TH61_13495 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TH61_13490 phosphonate ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TH61_12540 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TH61_12545 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D TH61_12550 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D TH61_12555 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TH61_14460 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D TH61_14450 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D TH61_14445 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein
D TH61_14455 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D TH61_11665 ABC transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D TH61_11670 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TH61_05860 releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_10090 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_00690 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_17540 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TH61_10095 ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TH61_08970 ABC transporter permease K02195 ccmC; heme exporter protein C
D TH61_08965 ABC transporter permease K02194 ccmB; heme exporter protein B
D TH61_14660 permease K07091 lptF; lipopolysaccharide export system permease protein
D TH61_02895 permease K11720 lptG; lipopolysaccharide export system permease protein
D TH61_06670 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TH61_17310 nitrous oxide reductase K19341 nosY; Cu-processing system permease protein
D TH61_17315 copper ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D TH61_13815 cell division protein K09811 ftsX; cell division transport system permease protein
D TH61_13595 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D TH61_04160 antibiotic ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TH61_07070 ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TH61_06900 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:rud03070]
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_11020 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D TH61_09520 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D TH61_15365 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TH61_09685 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TH61_07105 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TH61_13970 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TH61_09830 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TH61_08260 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TH61_13645 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TH61_03885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D TH61_05890 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:rud02020]
D TH61_00380 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_09965 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_05225 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_09970 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D TH61_06910 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D TH61_12540 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TH61_09860 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_01725 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_05415 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D TH61_05425 metal transporter K07787 cusA; copper/silver efflux system protein
D TH61_01230 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D TH61_16610 phosphate regulon sensor protein PhoR K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_17585 hypothetical protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_02040 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TH61_07215 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_07035 ATPase AAA K07713 zraR; two-component system, NtrC family, response regulator HydG
D TH61_12845 ATPase AAA K07713 zraR; two-component system, NtrC family, response regulator HydG
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_16055 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D TH61_07950 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D TH61_12205 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TH61_14135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TH61_14150 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TH61_14140 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TH61_12210 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_14145 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_12670 PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D TH61_17090 histidine kinase K11443 divK; two-component system, cell cycle response regulator DivK
D TH61_00470 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_10945 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_12035 bifunctional cbb3-type cytochrome c oxidase subunit I/II K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D TH61_12045 cytochrome c class i K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_09220 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D TH61_10175 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D TH61_09225 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_10170 capsular biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_16155 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D TH61_05285 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D TH61_01040 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:rud02024]
D TH61_15965 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D TH61_17125 hypothetical protein K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D TH61_04425 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TH61_07275 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D TH61_00185 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TH61_16185 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TH61_16195 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TH61_06455 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TH61_13970 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TH61_11020 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D TH61_09520 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D TH61_15365 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TH61_09685 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TH61_07105 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TH61_09830 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TH61_08260 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TH61_13645 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:rud02030]
D TH61_14150 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TH61_14135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TH61_14140 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TH61_14155 hypothetical protein K03410 cheC; chemotaxis protein CheC
D TH61_12210 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_14145 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_12205 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TH61_01430 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02710 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02715 hypothetical protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:rud02040]
D TH61_01430 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02710 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02715 hypothetical protein K02557 motB; chemotaxis protein MotB
D TH61_14675 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D TH61_07950 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:rud04980]
D TH61_01925 cob(I)yrinic acid a c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D TH61_02110 protein kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D TH61_02075 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_02090 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D TH61_03215 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:rud01501]
D TH61_01880 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TH61_11635 glycoside hydrolase family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D TH61_10610 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D TH61_12875 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_05800 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_10615 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_08355 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D TH61_01550 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_12380 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_00195 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_01555 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TH61_00185 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_04885 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_10130 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_03135 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:rud01502]
D TH61_17430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TH61_07565 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D TH61_08765 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D TH61_17760 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:rud01503]
D TH61_10310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TH61_09860 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_01725 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_01550 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_12380 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_00195 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_01555 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_10485 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:rud01000]
C 01001 Protein kinases [BR:rud01001]
D TH61_17425 penicillin-binding protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D TH61_06965 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D TH61_06390 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TH61_10035 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TH61_09225 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_10170 capsular biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_00380 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_09965 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_05225 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_16610 phosphate regulon sensor protein PhoR K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_17585 hypothetical protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_07215 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TH61_08595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D TH61_10705 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D TH61_14150 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TH61_12670 PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D TH61_00470 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_10945 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_12265 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:rud01009]
D TH61_09430 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:rud01002]
D TH61_06445 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D TH61_13570 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D TH61_07355 glycoside hydrolase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D TH61_13875 hypothetical protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D TH61_02815 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D TH61_08645 hypothetical protein K13695 nlpC; probable lipoprotein NlpC
D TH61_11980 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D TH61_06725 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D TH61_11395 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D TH61_08665 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D TH61_14360 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D TH61_12415 hypothetical protein K07052 K07052; CAAX protease family protein
D TH61_09760 hypothetical protein K07052 K07052; CAAX protease family protein
D TH61_14355 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D TH61_12490 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D TH61_12805 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D TH61_00670 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D TH61_01530 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D TH61_16775 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_03980 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_05000 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_05005 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_10715 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_10720 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D TH61_13325 peptidase M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D TH61_15100 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TH61_06005 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TH61_12300 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D TH61_01485 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D TH61_14225 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TH61_09690 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D TH61_02535 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TH61_08250 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TH61_11765 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D TH61_03925 hypothetical protein K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D TH61_12260 peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D TH61_07965 peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D TH61_10680 peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D TH61_03870 glutamine cyclotransferase K00683 QPCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D TH61_01675 peptidase M42 K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-]
D TH61_14555 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D TH61_15835 dihydrofolate reductase K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D TH61_01995 peptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D TH61_10610 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D TH61_12810 phenylalanyl-tRNA synthetase subunit alpha K09933 mtfA; MtfA peptidase
D TH61_12570 D-aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D TH61_09860 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_01725 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_06105 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D TH61_07800 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_11790 prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_08290 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_15545 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D TH61_07350 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TH61_01135 Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D TH61_01970 Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D TH61_12075 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TH61_13940 aminodeoxychorismate synthase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D TH61_16780 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_17505 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_09875 hypothetical protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D TH61_04075 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TH61_01740 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TH61_08175 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D TH61_12525 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D TH61_03105 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D TH61_05015 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D TH61_00910 signal peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D TH61_02580 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D TH61_14345 cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D TH61_01870 protease K07059 K07059; rhomboid family protein
D TH61_01865 rhomboid family protein K07059 K07059; rhomboid family protein
D TH61_03865 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_07345 microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_12790 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_13375 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D TH61_14340 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_06810 hypothetical protein K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D TH61_12985 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_01755 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D TH61_09750 TldD protein K03568 tldD; TldD protein
D TH61_05075 TldD protein K03568 tldD; TldD protein
D TH61_13140 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:rud01003]
D TH61_01060 dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D TH61_16600 glycogen synthase K00693 GYS; glycogen synthase [EC:2.4.1.11]
D TH61_16590 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11]
D TH61_06735 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D TH61_14540 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TH61_13145 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TH61_04885 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_10130 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_04930 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D TH61_13660 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D TH61_03075 trehalose-6-phosphate synthase K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:rud01005]
D TH61_10485 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D TH61_01145 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D TH61_10490 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D TH61_10495 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D TH61_11180 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D TH61_01650 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D TH61_02250 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D TH61_13920 2-dehydro-3-deoxyphosphogluconate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D TH61_13185 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D TH61_09005 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D TH61_11225 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D TH61_11815 carbohydrate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D TH61_12615 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D TH61_15765 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D TH61_04170 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D TH61_01050 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D TH61_01165 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D TH61_11385 hypothetical protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D TH61_04930 glycerophosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:rud01011]
D TH61_13260 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D TH61_13215 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D TH61_17755 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D TH61_17430 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D TH61_00015 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D TH61_07565 alanine racemase K01798 alr-murF; Alr-MurF fusion protein [EC:5.1.1.1 6.3.2.10]
D TH61_00975 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D TH61_03865 peptidase S66 K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_07345 microcin C7 resistance protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_12790 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D TH61_17760 UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D TH61_13805 UDP-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_15040 PA-phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D TH61_04885 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_10130 transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D TH61_13145 glycosyl transferase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D TH61_03135 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D TH61_07350 peptidase S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D TH61_15545 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
D TH61_14540 peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D TH61_14360 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D TH61_01485 peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D TH61_03895 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TH61_02570 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TH61_15490 murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D TH61_01635 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D TH61_05740 lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D TH61_10310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:rud01004]
D TH61_17710 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D TH61_13300 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_14470 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_16030 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D TH61_11270 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_16685 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D TH61_07820 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_11885 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D TH61_10490 hydroxymyristoyl-ACP dehydratase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D TH61_01800 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D TH61_06180 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D TH61_15855 GDSL family lipase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D TH61_01570 hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D TH61_10290 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D TH61_02295 fatty acid desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D TH61_12240 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D TH61_02410 acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D TH61_04425 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TH61_03405 hypothetical protein K13507 GAT; glycerol-3-phosphate O-acyltransferase / dihydroxyacetone phosphate acyltransferase [EC:2.3.1.15 2.3.1.42]
D TH61_13305 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D TH61_04210 acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
C 01008 Polyketide biosynthesis proteins [BR:rud01008]
C 01006 Prenyltransferases [BR:rud01006]
D TH61_06465 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D TH61_17690 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D TH61_07715 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D TH61_00080 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D TH61_17075 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TH61_01025 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D TH61_01225 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:rud01007]
D TH61_06700 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TH61_14710 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TH61_16740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TH61_03875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TH61_01035 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TH61_02990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TH61_06440 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TH61_10445 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TH61_15220 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TH61_01775 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TH61_03715 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TH61_04715 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_07945 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_13760 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TH61_06425 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TH61_02470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TH61_04495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TH61_14620 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TH61_15080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TH61_08585 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TH61_03345 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TH61_14090 hypothetical protein K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_11810 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D TH61_08790 hypothetical protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D TH61_14805 histidinol phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D TH61_14700 8-amino-7-oxononanoate synthase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TH61_08340 2-amino-3-ketobutyrate CoA ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D TH61_16670 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D TH61_08230 rocD; ornithine--oxo-acid aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D TH61_10755 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D TH61_16680 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D TH61_13560 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D TH61_12575 amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_01930 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D TH61_04705 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_02135 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D TH61_13610 Pleiotropic regulatory protein K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:rud00194]
D TH61_02935 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D TH61_02940 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D TH61_04840 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D TH61_04845 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D TH61_04850 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D TH61_04855 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D TH61_04860 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D TH61_04865 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:rud03000]
D TH61_06770 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D TH61_10690 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D TH61_08070 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D TH61_09370 hypothetical protein K07506 K07506; AraC family transcriptional regulator
D TH61_03370 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D TH61_12010 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D TH61_16570 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TH61_08440 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D TH61_01575 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D TH61_00640 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D TH61_04720 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D TH61_04420 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D TH61_00095 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TH61_13455 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D TH61_01115 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D TH61_00215 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D TH61_03505 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D TH61_05350 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D TH61_05545 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D TH61_00720 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D TH61_14465 iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D TH61_12875 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_05800 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_10615 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_11200 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D TH61_05500 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D TH61_17500 XRE family transcriptional regulator K07727 K07727; putative transcriptional regulator
D TH61_15265 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D TH61_13955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TH61_10165 hypothetical protein K05785 rfaH; transcriptional antiterminator RfaH
D TH61_06780 GreA/GreB family elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D TH61_02515 PyrR protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TH61_11045 phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D TH61_14945 hypothetical protein K07735 algH; putative transcriptional regulator
D TH61_06595 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TH61_00035 protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:rud03021]
D TH61_09715 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TH61_09550 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TH61_09555 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TH61_14675 RNA polymerase sigma factor rpoD K03086 rpoD; RNA polymerase primary sigma factor
D TH61_06500 RNA polymerase sigma70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_17145 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_03630 RNA polymerase sigma70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_05035 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_02880 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_17030 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D TH61_16155 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D TH61_05285 hypothetical protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D TH61_07950 RNA polymerase sigma54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D TH61_07600 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D TH61_07085 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TH61_09525 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TH61_06965 anti-sigma regulatory factor K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D TH61_06970 anti-sigma factor antagonist K17762 rsbS; rsbT antagonist protein RsbS
D TH61_06975 anti-anti-sigma factor K17763 rsbR; rsbT co-antagonist protein RsbR
D TH61_16430 serine/threonine protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D TH61_15715 sigma factor sigB regulation protein rsbQ K19707 rsbQ; sigma-B regulation protein RsbQ
D TH61_12195 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D TH61_01110 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D TH61_10040 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D TH61_12190 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D TH61_16720 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist
D TH61_06390 serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TH61_10035 hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D TH61_06595 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TH61_16460 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D TH61_14645 GreA/GreB family elongation factor K04760 greB; transcription elongation factor GreB
D TH61_02465 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:rud03019]
D TH61_04475 hypothetical protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
D TH61_04315 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TH61_11275 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TH61_03360 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-]
D TH61_06460 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TH61_07390 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_15725 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_00395 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_01020 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D TH61_14255 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TH61_14175 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_11230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_14395 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_17525 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TH61_14670 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D TH61_02465 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D TH61_17065 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TH61_08735 hypothetical protein K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TH61_16475 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D TH61_00740 tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D TH61_12630 ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
D TH61_12740 DEAD/DEAH box helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:rud03011]
D TH61_13890 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D TH61_09945 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D TH61_09615 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D TH61_09710 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D TH61_09670 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D TH61_01275 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D TH61_09570 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D TH61_09655 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D TH61_09950 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D TH61_09580 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D TH61_09705 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D TH61_09565 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D TH61_09700 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D TH61_09650 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D TH61_14665 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D TH61_10285 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D TH61_09630 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D TH61_01280 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D TH61_09605 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D TH61_11250 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D TH61_09210 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D TH61_09535 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D TH61_09600 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D TH61_09585 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D TH61_09590 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D TH61_09645 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D TH61_09660 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D TH61_01285 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D TH61_09540 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D TH61_09530 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D TH61_09545 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D TH61_09955 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D TH61_09635 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D TH61_09680 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D TH61_09620 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D TH61_09720 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D TH61_09665 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D TH61_10270 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D TH61_14635 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D TH61_05660 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D TH61_09610 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D TH61_09595 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D TH61_09640 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D TH61_05655 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D TH61_08245 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D TH61_09625 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D TH61_09675 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D TH61_11050 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D TH61_13310 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D TH61_08255 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D TH61_14630 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D TH61_02960 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D TH61_01080 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_03985 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_04040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_01100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_01085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_03990 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_04045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:rud03009]
D TH61_11275 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TH61_15190 DNA-binding protein K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D TH61_04470 GTPase Era K03595 era; GTPase
D TH61_11505 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D TH61_06595 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor
D TH61_07600 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D TH61_07085 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D TH61_09525 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D TH61_13330 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D TH61_15400 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D TH61_02875 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TH61_00030 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D TH61_05930 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TH61_07655 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D TH61_11215 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D TH61_16925 23S rRNA methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D TH61_06000 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D TH61_09800 oxidoreductase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D TH61_13220 THUMP domain-containing protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D TH61_03855 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D TH61_00615 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D TH61_16100 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D TH61_07735 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TH61_10295 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TH61_09960 pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D TH61_15550 hypothetical protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D TH61_12475 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D TH61_14390 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D TH61_16800 GNAT family acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D TH61_03230 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D TH61_10280 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D TH61_04220 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D TH61_04315 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D TH61_08145 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D TH61_15460 helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D TH61_14255 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D TH61_02255 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D TH61_04465 GTP-binding protein Der K03977 engA; GTPase
D TH61_08745 GTPase HflX K03665 hflX; GTPase
D TH61_07795 translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TH61_01120 MFS transporter K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D TH61_07595 ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D TH61_11195 iojap family protein K09710 ybeB; ribosome-associated protein
D TH61_06395 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D TH61_09200 hypothetical protein K05808 hpf; ribosome hibernation promoting factor
D TH61_15820 ychF; GTP-binding protein K06942 ychF; ribosome-binding ATPase
D TH61_13315 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:rud03016]
D TH61_16725 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D TH61_03095 protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D TH61_06700 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TH61_04495 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D TH61_06440 hypothetical protein K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D TH61_15220 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TH61_02990 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D TH61_01035 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TH61_01775 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D TH61_03715 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TH61_15080 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D TH61_04715 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_07945 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D TH61_06425 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TH61_14620 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D TH61_02470 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D TH61_03875 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D TH61_10445 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D TH61_13760 histidyl-tRNA synthase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D TH61_08585 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D TH61_03345 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D TH61_14710 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TH61_16740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D TH61_02370 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D TH61_16455 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TH61_14760 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D TH61_13800 pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D TH61_07785 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00750 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_07795 translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D TH61_17075 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D TH61_14435 tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D TH61_06400 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TH61_04080 hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D TH61_17775 bacterial RNase P K01978 rnpB; M1 RNA
D TH61_15555 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D TH61_08095 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D TH61_03820 CMP deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D TH61_07245 NifR3 family TIM-barrel protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D TH61_15345 (dimethylallyl)adenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D TH61_15255 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D TH61_10275 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D TH61_02155 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D TH61_15020 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D TH61_13030 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D TH61_16100 pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D TH61_14770 thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D TH61_11540 [Fe-S]-binding protein K13628 iscA; iron-sulfur cluster assembly protein
D TH61_00765 heme biosynthesis protein HemY K13628 iscA; iron-sulfur cluster assembly protein
D TH61_15310 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D TH61_01380 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TH61_08050 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D TH61_01150 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_01585 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_10225 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D TH61_15595 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D TH61_02890 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D TH61_01840 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D TH61_04070 peptidase M22 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D TH61_13825 tRNA threonylcarbamoyladenosine biosynthesis protein Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D TH61_10535 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D TH61_06460 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D TH61_14670 polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:rud03012]
D TH61_13180 hypothetical protein K03113 EIF1; translation initiation factor 1
D TH61_07605 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TH61_14625 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TH61_13350 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TH61_15910 glycosyl transferase family 2 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D TH61_15190 DNA-binding protein K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
D TH61_09940 elongation factor Ts K02357 tsf; elongation factor Ts
D TH61_09510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TH61_09575 fusA; elongation factor G K02355 fusA; elongation factor G
D TH61_06010 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D TH61_09475 ribosome-recycling factor K02838 frr; ribosome recycling factor
D TH61_07280 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D TH61_02970 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D TH61_09695 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D TH61_13295 elongation factor P K02356 efp; elongation factor P
D TH61_01935 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D TH61_05810 peptide chain release factor 1 K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:rud03110]
D TH61_03535 Clp protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D TH61_01665 Clp protease ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D TH61_01140 ATPase AAA K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D TH61_01955 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TH61_09740 heat shock protein Hsp70 K04044 hscA; molecular chaperone HscA
D TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TH61_11515 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TH61_00130 hypothetical protein K04082 hscB; molecular chaperone HscB
D TH61_11510 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D TH61_09855 hypothetical protein K13993 HSP20; HSP20 family protein
D TH61_15370 molecular chaperone GroES K04078 groES; chaperonin GroES
D TH61_09860 deoxyribonuclease HsdR K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_01725 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D TH61_04865 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D TH61_05010 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D TH61_00445 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D TH61_03265 beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_17255 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D TH61_02870 hypothetical protein K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D TH61_02260 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D TH61_06630 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D TH61_09035 hypothetical protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D TH61_15635 membrane protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D TH61_15195 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D TH61_10025 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D TH61_02610 thioredoxin K03671 TXN; thioredoxin
D TH61_00865 thioredoxin K03671 TXN; thioredoxin
D TH61_08320 thioredoxin K03671 TXN; thioredoxin
D TH61_06285 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:rud04131]
D TH61_09045 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D TH61_13170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TH61_11255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15980 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D TH61_16150 MFS transporter permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:rud04121]
D TH61_04475 hypothetical protein K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
C 03051 Proteasome [BR:rud03051]
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:rud03032]
D TH61_02150 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D TH61_04325 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TH61_02040 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TH61_16975 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D TH61_10575 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_02590 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TH61_13535 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TH61_14720 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TH61_11065 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TH61_08350 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_16985 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_14580 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_11855 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_05560 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_03660 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TH61_02405 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TH61_14895 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TH61_16480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TH61_14600 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TH61_14595 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TH61_14115 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TH61_14560 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TH61_17165 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:rud03036]
D TH61_11275 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D TH61_04325 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TH61_02040 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D TH61_03365 hypothetical protein K04047 dps; starvation-inducible DNA-binding protein
D TH61_09075 chromosome segregation protein ScpA K05896 scpA; segregation and condensation protein A
D TH61_06600 S-(hydroxymethyl)glutathione dehydrogenase K06024 scpB; segregation and condensation protein B
D TH61_17745 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TH61_13595 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D TH61_10390 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D TH61_17750 hypothetical protein K03589 ftsQ; cell division protein FtsQ
D TH61_17765 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TH61_13815 cell division protein K09811 ftsX; cell division transport system permease protein
D TH61_17740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TH61_03355 cell division protein ZapA K09888 zapA; cell division protein ZapA
D TH61_10310 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TH61_01550 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_12380 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_00195 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_10360 hypothetical protein K04074 divIVA; cell division initiation protein
D TH61_03150 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TH61_03145 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D TH61_03130 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D TH61_13960 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D TH61_14125 hypothetical protein K03496 parA; chromosome partitioning protein
D TH61_13955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D TH61_14600 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TH61_14595 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TH61_06400 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D TH61_02875 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D TH61_09205 integrase K03733 xerC; integrase/recombinase XerC
D TH61_02120 integrase K04763 xerD; integrase/recombinase XerD
D TH61_11925 hypothetical protein K04763 xerD; integrase/recombinase XerD
D TH61_10560 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TH61_02215 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:rud03400]
D TH61_07885 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D TH61_13935 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D TH61_09415 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D TH61_04330 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D TH61_04280 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TH61_02675 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D TH61_14925 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D TH61_14020 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TH61_15505 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D TH61_07625 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D TH61_15800 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D TH61_08840 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D TH61_16920 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TH61_06380 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D TH61_03555 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D TH61_06650 recombinase RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D TH61_15730 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D TH61_05855 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TH61_04225 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TH61_12780 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D TH61_09280 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D TH61_04890 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D TH61_13270 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TH61_09550 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D TH61_09555 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D TH61_09715 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D TH61_08815 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D TH61_08905 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D TH61_13210 DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D TH61_01875 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D TH61_01510 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D TH61_02590 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D TH61_13535 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D TH61_14720 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D TH61_11065 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D TH61_08350 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_16985 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_14580 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_11855 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_05560 DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D TH61_03660 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_09980 recombinase RecA K03553 recA; recombination protein RecA
D TH61_03905 ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D TH61_10965 ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D TH61_16450 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D TH61_01305 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D TH61_00815 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D TH61_00305 nuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D TH61_05975 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D TH61_06560 DNA recombination protein RecF K03629 recF; DNA replication and repair protein RecF
D TH61_04375 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D TH61_09025 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O)
D TH61_11800 recombinase RecR K06187 recR; recombination protein RecR
D TH61_01805 DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D TH61_14245 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D TH61_14215 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D TH61_14895 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D TH61_16480 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D TH61_14115 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TH61_14560 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D TH61_04325 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D TH61_14175 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_11230 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_14395 hypothetical protein K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_17525 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D TH61_14370 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D TH61_11555 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D TH61_14375 DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D TH61_07525 RecX family transcriptional regulator K03565 recX; regulatory protein
D TH61_02490 DNA polymerase IV K02347 polX; DNA polymerase (family X)
D TH61_07435 hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D TH61_14005 hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D TH61_05670 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D TH61_05665 ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D TH61_09040 exopolyphosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:rud03029]
D TH61_07605 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D TH61_14625 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D TH61_09940 elongation factor Ts K02357 tsf; elongation factor Ts
D TH61_09510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TH61_09575 fusA; elongation factor G K02355 fusA; elongation factor G
D TH61_04470 GTPase Era K03595 era; GTPase
D TH61_14710 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D TH61_15220 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D TH61_03715 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D TH61_06425 glycyl-tRNA synthetease K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D TH61_01035 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D TH61_03890 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D TH61_15075 gatB; glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D TH61_01910 glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D TH61_16385 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D TH61_06300 hypothetical protein K01173 ENDOG; endonuclease G, mitochondrial
D TH61_04335 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D TH61_07720 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D TH61_15025 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TH61_11510 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TH61_15370 molecular chaperone GroES K04078 groES; chaperonin GroES
D TH61_11515 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D TH61_07785 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00750 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00130 hypothetical protein K04082 hscB; molecular chaperone HscB
D TH61_11005 thioredoxin K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D TH61_10560 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D TH61_01225 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D TH61_01230 cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D TH61_13970 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TH61_12150 hypothetical protein K07152 SCO1; protein SCO1
D TH61_01205 hypothetical protein K07152 SCO1; protein SCO1
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:rud02000]
D TH61_04160 antibiotic ABC transporter ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D TH61_07070 ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D TH61_06900 antibiotic ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D TH61_15140 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TH61_02855 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D TH61_00985 ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein
D TH61_13495 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D TH61_13490 phosphonate ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D TH61_12540 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D TH61_12545 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D TH61_12550 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D TH61_12555 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D TH61_16185 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D TH61_16195 hypothetical protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D TH61_06455 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D TH61_01160 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D TH61_01155 iron (III) ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D TH61_08075 iron ABC transporter ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D TH61_14460 manganese transporter K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D TH61_14450 zinc ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein
D TH61_14445 iron ABC transporter K11709 troD; manganese/zinc/iron transport system permease protein
D TH61_14455 manganese ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D TH61_11665 ABC transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D TH61_11670 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D TH61_14660 permease K07091 lptF; lipopolysaccharide export system permease protein
D TH61_02895 permease K11720 lptG; lipopolysaccharide export system permease protein
D TH61_06670 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D TH61_17310 nitrous oxide reductase K19341 nosY; Cu-processing system permease protein
D TH61_17315 copper ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D TH61_13515 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein
D TH61_13510 gliding motility protein GldA K25152 gldA; gliding motility-associated transport system ATP-binding protein
D TH61_13520 gliding-associated ABC transporter substrate-binding component GldG K25153 gldG; gliding motility-associatede transport system auxiliary component
D TH61_05860 releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_10090 ABC transporter K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_00690 ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein
D TH61_17540 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TH61_10095 ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D TH61_08970 ABC transporter permease K02195 ccmC; heme exporter protein C
D TH61_08965 ABC transporter permease K02194 ccmB; heme exporter protein B
D TH61_13815 cell division protein K09811 ftsX; cell division transport system permease protein
D TH61_13595 phosphonate ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D TH61_12730 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D TH61_11525 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D TH61_10600 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D TH61_10605 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_12735 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_16885 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_06515 ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_11520 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_05240 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D TH61_12860 macrolide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_00880 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_15300 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_04975 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_04980 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_08045 ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_15845 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_06980 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D TH61_12855 phosphonate ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TH61_04985 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TH61_01920 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TH61_15850 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TH61_06985 phosphonate ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D TH61_15270 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D TH61_16965 hypothetical protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D TH61_14085 multidrug transporter K26939 norM; MATE family, multidrug efflux pump
D TH61_14385 multidrug transporter MatE K26937 dinF; MATE family, multidrug efflux pump
D TH61_16575 glucose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D TH61_17195 multidrug transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D TH61_16150 MFS transporter permease K06902 UMF1; MFS transporter, UMF1 family
D TH61_14380 potassium transporter TrkA K10716 kch; voltage-gated potassium channel
D TH61_00825 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D TH61_16645 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D TH61_14050 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D TH61_17020 von willebrand factor type a K07114 yfbK; Ca-activated chloride channel homolog
D TH61_02280 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog
D TH61_03850 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D TH61_00685 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D TH61_05955 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D TH61_07180 hypothetical protein K16052 ynaI; MscS family membrane protein
D TH61_13335 magnesium transporter K06213 mgtE; magnesium transporter
D TH61_01430 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02710 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02715 hypothetical protein K02557 motB; chemotaxis protein MotB
D TH61_07770 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB
D TH61_14740 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D TH61_14745 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D TH61_11990 hypothetical protein K03284 corA; magnesium transporter
D TH61_13120 hypothetical protein K03284 corA; magnesium transporter
D TH61_02335 magnesium transporter CorA K03284 corA; magnesium transporter
D TH61_11905 hypothetical protein K06199 crcB; fluoride exporter
D TH61_05620 membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D TH61_05470 membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D TH61_05355 heavy metal transporter K08363 merT; mercuric ion transport protein
D TH61_05540 heavy metal transporter K08363 merT; mercuric ion transport protein
D TH61_00050 MerP K08364 merP; periplasmic mercuric ion binding protein
D TH61_12755 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D TH61_02640 hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D TH61_13115 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D TH61_05840 long-chain fatty acid transport protein, outer membrane protein K06076 fadL; long-chain fatty acid transport protein
D TH61_09400 hypothetical protein K16092 btuB; vitamin B12 transporter
D TH61_02735 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D TH61_09155 TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D TH61_09165 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D TH61_01400 hypothetical protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D TH61_07365 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D TH61_06135 energy transducer TonB K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_10905 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_03085 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_08130 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_16025 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_05505 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D TH61_05420 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_00185 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TH61_09220 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D TH61_10175 sugar transporter K01991 wza; polysaccharide biosynthesis/export protein
D TH61_07720 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D TH61_15025 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family
D TH61_08855 hypothetical protein K09800 tamB; translocation and assembly module TamB
D TH61_01760 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D TH61_08945 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D TH61_16525 major facilitator transporter K16211 malY; maltose/moltooligosaccharide transporter
D TH61_09360 hypothetical protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D TH61_05460 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D TH61_06070 zinc/iron permease K16267 zipB; zinc and cadmium transporter
D TH61_05490 acriflavine resistance protein B K15726 czcA; heavy metal efflux system protein
D TH61_05425 metal transporter K07787 cusA; copper/silver efflux system protein
D TH61_01555 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TH61_08620 copper transporter K18989 vexF; multidrug efflux pump
D TH61_11170 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D TH61_07560 permease K05786 rarD; chloramphenicol-sensitive protein RarD
D TH61_06420 nuclease PIN K16322 pit; low-affinity inorganic phosphate transporter
D TH61_16055 C4-dicarboxylate transporter K11103 dctA; aerobic C4-dicarboxylate transport protein
D TH61_07875 cation transporter K24160 NHA1; sodium/hydrogen antiporter
D TH61_04745 hypothetical protein K03316 nhaP; Na+:H+ antiporter
D TH61_04490 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D TH61_17630 hypothetical protein K03498 trkH; trk/ktr system potassium uptake protein
D TH61_17625 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D TH61_07315 chromate transporter K07240 chrA; chromate transporter
D TH61_08405 chromate transporter K07240 chrA; chromate transporter
D TH61_08420 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D TH61_10500 arsenic resistance protein ArsB K03325 ACR3; arsenite transporter
D TH61_15645 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D TH61_16730 membrane protein K09125 yhhQ; queuosine precursor transporter
D TH61_13015 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D TH61_02140 membrane protein K05595 marC; multiple antibiotic resistance protein
D TH61_11825 antibiotic resistance protein MarC K05595 marC; multiple antibiotic resistance protein
D TH61_17765 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D TH61_12890 hypothetical protein K03832 tonB; periplasmic protein TonB
D TH61_01735 hypothetical protein K03832 tonB; periplasmic protein TonB
D TH61_07755 energy transducer TonB K03832 tonB; periplasmic protein TonB
D TH61_02220 hypothetical protein K03832 tonB; periplasmic protein TonB
D TH61_06845 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein
D TH61_01335 hypothetical protein K03646 tolA; colicin import membrane protein
D TH61_01340 hypothetical protein K03646 tolA; colicin import membrane protein
D TH61_05485 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D TH61_05415 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D TH61_01550 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_12380 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_00195 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_08615 RND transporter K18990 vexE; membrane fusion protein, multidrug efflux system
D TH61_09225 hypothetical protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_10170 capsular biosynthesis protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D TH61_05270 membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_02740 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_03480 carbohydrate-binding protein SusD K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_01395 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_16560 carbohydrate-binding protein SusD K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_09170 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_09160 hypothetical protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D TH61_10060 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
D TH61_07585 iron transporter K04758 feoA; ferrous iron transport protein A
D TH61_07590 iron transporter FeoB K04759 feoB; ferrous iron transport protein B
D TH61_08985 cytochrome C biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D TH61_15560 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D TH61_15160 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:rud02044]
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
D TH61_11085 hypothetical protein K02237 comEA; competence protein ComEA
D TH61_09830 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D TH61_11020 preprotein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D TH61_09520 preprotein translocase K03073 secE; preprotein translocase subunit SecE
D TH61_15365 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D TH61_09685 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D TH61_13645 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D TH61_08260 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D TH61_07105 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D TH61_13970 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D TH61_03885 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D TH61_05890 preprotein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:rud02042]
D TH61_02640 hemolysins-related protein containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:rud02022]
D TH61_00380 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_09965 alkaline phosphatase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_05225 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D TH61_09970 ArsR family transcriptional regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D TH61_16610 phosphate regulon sensor protein PhoR K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_17585 hypothetical protein K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D TH61_07215 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D TH61_08595 histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D TH61_10705 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D TH61_03735 transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D TH61_08600 LytR family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D TH61_12945 regulator K02477 K02477; two-component system, LytTR family, response regulator
D TH61_15745 chemotaxis protein CheY K02477 K02477; two-component system, LytTR family, response regulator
D TH61_05230 chemotaxis protein CheY K02477 K02477; two-component system, LytTR family, response regulator
D TH61_07920 hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D TH61_07035 ATPase AAA K07713 zraR; two-component system, NtrC family, response regulator HydG
D TH61_12845 ATPase AAA K07713 zraR; two-component system, NtrC family, response regulator HydG
D TH61_04970 chemotaxis protein CheY K02481 flgR; two-component system, NtrC family, response regulator
D TH61_14150 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TH61_14140 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TH61_12210 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_14145 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_12205 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TH61_12670 PAS/PAC sensor protein K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D TH61_17090 histidine kinase K11443 divK; two-component system, cell cycle response regulator DivK
D TH61_00470 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_10945 histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D TH61_12265 hypothetical protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:rud02035]
D TH61_14150 histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D TH61_14135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D TH61_14155 hypothetical protein K03410 cheC; chemotaxis protein CheC
D TH61_12210 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_14145 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D TH61_12205 hypothetical protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D TH61_14140 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D TH61_01430 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02710 cell envelope biogenesis protein OmpA K02557 motB; chemotaxis protein MotB
D TH61_02715 hypothetical protein K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:rud04812]
D TH61_03150 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TH61_17740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TH61_17745 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D TH61_13960 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D TH61_14125 hypothetical protein K03496 parA; chromosome partitioning protein
D TH61_13955 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:rud04147]
D TH61_06145 molecular chaperone Hsp90 K04079 HSP90A; molecular chaperone HtpG
D TH61_09730 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D TH61_13170 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D TH61_17520 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D TH61_11255 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15980 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40]
D TH61_15100 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TH61_06005 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TH61_02245 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D TH61_15375 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D TH61_11860 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D TH61_10240 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D TH61_07800 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_11790 prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_08290 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_10050 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D TH61_09510 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D TH61_16455 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D TH61_15270 membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D TH61_04425 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D TH61_16655 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D TH61_09430 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D TH61_11500 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D TH61_10735 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D TH61_10765 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D TH61_02765 cystathionine gamma-synthase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D TH61_13360 hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D TH61_10550 fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D TH61_16835 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_02230 fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D TH61_08430 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D TH61_16585 1,4-alpha-glucan branching protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D TH61_15245 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D TH61_08225 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D TH61_16750 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D TH61_05925 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D TH61_13340 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_04710 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D TH61_03160 phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D TH61_11930 hypothetical protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_04510 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_05465 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D TH61_13480 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D TH61_07260 amino acid dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_06495 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D TH61_04235 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D TH61_08865 outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:rud02048]
D TH61_08545 deoxyribonuclease HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D TH61_08540 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D TH61_08535 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D TH61_00560 hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D TH61_16335 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D TH61_00850 Restriction endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D TH61_08525 5-methylcytosine-specific restriction protein C K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D TH61_07845 hypothetical protein K07448 mrr; restriction system protein
D TH61_15865 hypothetical protein K19334 tabA; biofilm protein TabA
D TH61_17740 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D TH61_03150 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D TH61_14600 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D TH61_14595 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D TH61_06700 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TH61_07785 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D TH61_00750 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:rud04090]
D TH61_07800 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_11790 prolyl tripeptidyl peptidase K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D TH61_08290 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:rud01504]
D TH61_10475 protein-L-isoaspartate O-methyltransferase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D TH61_05630 hypothetical protein K18555 qnr; fluoroquinolone resistance protein
D TH61_10610 hypothetical protein K02172 blaR1; bla regulator protein blaR1
D TH61_12875 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_05800 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_10615 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D TH61_08355 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D TH61_01550 cation transporter K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_12380 RND transporter MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_00195 hemolysin D K03585 acrA; membrane fusion protein, multidrug efflux system
D TH61_01555 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D TH61_00185 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D TH61_14975 hypothetical protein K12340 tolC; outer membrane protein
D TH61_12385 membrane protein K12340 tolC; outer membrane protein
D TH61_01560 transporter K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rud00537]
D TH61_17620 trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D TH61_15100 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D TH61_06005 hypothetical protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:rud03100]
D TH61_01090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_02835 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_03995 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_04050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D TH61_16630 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_02775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_17565 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_08705 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D TH61_08575 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D TH61_15440 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TH61_15450 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D TH61_13895 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D TH61_02950 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D TH61_13155 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TH61_13165 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D TH61_09500 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TH61_08910 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D TH61_04115 tRNA-His K14226 tRNA-His; tRNA His
D TH61_01095 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_04055 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_04000 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D TH61_17115 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_08915 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_10825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_00135 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_01125 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D TH61_00595 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TH61_00600 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D TH61_14650 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_17400 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_05600 tRNA-Met K14230 tRNA-Met; tRNA Met
D TH61_06825 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D TH61_16635 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TH61_07060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D TH61_16405 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_16640 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_01615 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D TH61_09505 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TH61_14935 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D TH61_09515 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D TH61_09495 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D TH61_07130 tRNA-Val K14237 tRNA-Val; tRNA Val
D TH61_01100 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_04005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D TH61_01085 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_03990 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_04045 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D TH61_01080 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_03985 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_04040 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D TH61_17775 bacterial RNase P K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D TH61_01945 short-chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D TH61_12350 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D TH61_00250 glucose dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D TH61_15620 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D TH61_00155 3-hydroxyisobutyrate dehydrogenase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D TH61_00160 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D TH61_10730 alcohol dehydrogenase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D TH61_12420 hypothetical protein K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D TH61_08820 protein-methionine-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D TH61_12820 PilB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TH61_16895 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TH61_11330 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D TH61_17010 thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TH61_02030 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D TH61_02020 hypothetical protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D TH61_00150 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D TH61_17560 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D TH61_14190 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TH61_07000 pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TH61_10235 nuclease PIN K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D TH61_08385 fatty acid hydroxylase K19703 FA2H; 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase [EC:1.14.18.6]
D TH61_12280 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D TH61_03425 cytochrome C553 K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D TH61_15055 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D TH61_13620 hypothetical protein K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D TH61_10750 acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D TH61_09310 hypothetical protein K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D TH61_02550 GCN5 family acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D TH61_15875 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D TH61_05865 GNAT family acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D TH61_01890 N-acetyl-alpha-D-glucosaminyl L-malate synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D TH61_13370 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D TH61_11315 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D TH61_12320 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TH61_13250 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D TH61_08360 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D TH61_12690 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D TH61_10840 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D TH61_16605 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TH61_01630 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TH61_13555 acyl-ACP thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TH61_03860 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D TH61_09230 capsular biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D TH61_08740 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D TH61_16415 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D TH61_07660 alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D TH61_16505 alpha-amylase K21575 susA; neopullulanase [EC:3.2.1.135]
D TH61_17245 glycosyl hydrolase K18577 EBM; mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]
D TH61_10125 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D TH61_08150 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D TH61_12990 penicillin amidase K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D TH61_16425 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D TH61_14690 GlcNAc-PI de-N-acetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D TH61_06715 dfrA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D TH61_08950 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TH61_05100 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TH61_10020 ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D TH61_03385 UV damage repair endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D TH61_04820 carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D TH61_15630 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D TH61_13905 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D TH61_16980 peptidoglycan synthetase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D TH61_09345 copper transporter K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D TH61_05360 ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D TH61_13010 hypothetical protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D TH61_05475 metal ABC transporter ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D TH61_07695 cbs domain containing protein K04767 acuB; acetoin utilization protein AcuB
D TH61_15755 Fe-S oxidoreductase K18928 lldE; L-lactate dehydrogenase complex protein LldE
D TH61_04695 [Fe-S]-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D TH61_11185 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D TH61_08270 bacillithiol biosynthesis cysteine-adding enzyme BshC K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D TH61_08995 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D TH61_11305 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D TH61_00755 scaffolding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D TH61_13475 electron transfer flavoprotein subunit alpha K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D TH61_14045 alanine racemase K06997 yggS; PLP dependent protein
D TH61_03420 GNAT family acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D TH61_09070 membrane protein K07027 K07027; glycosyltransferase 2 family protein
D TH61_06750 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D TH61_17735 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D TH61_07005 diguanylate cyclase K15975 K15975; glyoxalase family protein
D TH61_10630 DoxX family protein K15977 K15977; putative oxidoreductase
D TH61_11115 DoxX family protein K15977 K15977; putative oxidoreductase
D TH61_07015 phospholipase K06999 K06999; phospholipase/carboxylesterase
D TH61_11245 hypothetical protein K26958 brxA_B; bacilliredoxin
D TH61_04655 general stress protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D TH61_09010 cold-shock protein K03704 cspA; cold shock protein
D TH61_03035 cold-shock protein K03704 cspA; cold shock protein
D TH61_15470 cold-shock protein K03704 cspA; cold shock protein
D TH61_15485 cold-shock protein K03704 cspA; cold shock protein
D TH61_15510 cold-shock protein K03704 cspA; cold shock protein
D TH61_11570 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D TH61_13000 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
D TH61_08415 metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D TH61_11795 Clp protease ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D TH61_01130 trigger factor K03545 tig; trigger factor
D TH61_13870 single-stranded DNA-binding protein K03664 smpB; SsrA-binding protein
D TH61_04180 magnesium chelatase K07391 comM; magnesium chelatase family protein
D TH61_00390 dithiol-disulfide isomerase K07396 K07396; putative protein-disulfide isomerase
D TH61_03060 osmotically inducible protein OsmC K07397 yhfA; putative redox protein
D TH61_13080 alanine dehydrogenase K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D TH61_01545 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D TH61_03330 hypothetical protein K03630 radC; DNA repair protein RadC
D TH61_04945 endonuclease K07460 yraN; putative endonuclease
D TH61_04405 endonuclease K07461 K07461; putative endonuclease
D TH61_03100 endonuclease K07461 K07461; putative endonuclease
D TH61_15090 DNA processing protein DprA K04096 smf; DNA processing protein
D TH61_00920 ATPase AAA K07478 ycaJ; putative ATPase
D TH61_07485 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D TH61_13745 DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D TH61_01445 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TH61_00300 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TH61_17615 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TH61_07230 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D TH61_04250 amino acid transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D TH61_15390 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D TH61_14640 hypothetical protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D TH61_08435 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D TH61_07425 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D TH61_11015 Na+ dependent nucleoside transporter domain-containing protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D TH61_17300 hemerythrin K07322 ytfE; regulator of cell morphogenesis and NO signaling
D TH61_12505 KipI antagonist K06350 kipA; antagonist of KipI
D TH61_12500 kinase inhibitor K06351 kipI; inhibitor of KinA
C 99993 Cell motility
C 99995 Signaling proteins
D TH61_03020 GTP-binding protein TypA K06207 typA; GTP-binding protein
D TH61_00115 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D TH61_14315 phosphate starvation protein PhoH K07175 phoH2; PhoH-like ATPase
D TH61_13095 hypothetical protein K08481 kaiB; circadian clock protein KaiB
D TH61_13090 circadian clock protein KaiC K08482 kaiC; circadian clock protein KaiC
D TH61_08875 nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D TH61_10395 cell envelope biogenesis protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D TH61_07725 membrane protein K06142 hlpA; outer membrane protein
D TH61_07730 hypothetical protein K06142 hlpA; outer membrane protein
D TH61_15290 outer membrane chaperone Skp K06142 hlpA; outer membrane protein
D TH61_16210 hypothetical protein K07275 ompW; outer membrane protein
D TH61_14970 secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein
D TH61_04995 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D TH61_06990 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D TH61_10085 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D TH61_08980 cytochrome C biogenesis protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D TH61_05265 hypothetical protein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D TH61_12560 hypothetical protein K02039 phoU; phosphate transport system protein
D TH61_01065 integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D TH61_15445 membrane protein K05794 terC; tellurite resistance protein TerC
D TH61_17260 hypothetical protein K06201 cutC; copper homeostasis protein
D TH61_13930 cobalt transporter K06195 apaG; ApaG protein
D TH61_17320 nitrous oxide reductase K07218 nosD; nitrous oxidase accessory protein
D TH61_09350 hypothetical protein K07222 K07222; putative flavoprotein involved in K+ transport
D TH61_17325 hypothetical protein K19342 nosL; copper chaperone NosL
D TH61_17330 membrane protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D TH61_07680 hypothetical protein K03558 cvpA; membrane protein required for colicin V production
D TH61_17230 hypothetical protein K02348 elaA; ElaA protein
D TH61_14070 tRNA-binding protein K06878 K06878; tRNA-binding protein
D TH61_04255 SEC-independent protein translocase TATC K06886 glbN; hemoglobin
D TH61_15425 hypothetical protein K07001 K07001; NTE family protein
D TH61_06485 hypothetical protein K07001 K07001; NTE family protein
D TH61_11755 hypothetical protein K07001 K07001; NTE family protein
D TH61_03500 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D TH61_06525 hypothetical protein K07038 K07038; inner membrane protein
D TH61_01535 hypothetical protein K07058 K07058; membrane protein
D TH61_01625 ribonuclease bn K07058 K07058; membrane protein
D TH61_06705 ribonuclease BN K07058 K07058; membrane protein
D TH61_08310 ribonuclease BN K07058 K07058; membrane protein
D TH61_10420 sulfurtransferase K07146 K07146; UPF0176 protein
D TH61_16805 glyoxalase K04750 phnB; PhnB protein
D TH61_06195 LemA family protein K03744 lemA; LemA protein
D TH61_10885 hypothetical protein K03975 dedA; membrane-associated protein
D TH61_09250 hypothetical protein K03975 dedA; membrane-associated protein
D TH61_04260 hypothetical protein K00389 yidH; putative membrane protein
D TH61_14170 membrane protein K08972 K08972; putative membrane protein
D TH61_14865 membrane protein K08972 K08972; putative membrane protein
D TH61_01200 membrane protein K08976 K08976; putative membrane protein
D TH61_02685 membrane protein K08984 yjdF; putative membrane protein
D TH61_07980 hypothetical protein K08995 K08995; putative membrane protein
D TH61_07995 hypothetical protein K08995 K08995; putative membrane protein
D TH61_04370 phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D TH61_06205 beta-propeller domains of methanol dehydrogenase K06872 K06872; uncharacterized protein
D TH61_10525 phosphohydrolase K06885 K06885; uncharacterized protein
D TH61_17695 dienelactone hydrolase K06889 K06889; uncharacterized protein
D TH61_12395 ketosteroid isomerase K06893 K06893; uncharacterized protein
D TH61_14995 CoA-binding protein K06929 K06929; uncharacterized protein
D TH61_14915 phosphohydrolase K06950 K06950; uncharacterized protein
D TH61_06760 membrane protein K06973 K06973; uncharacterized protein
D TH61_02415 hypothetical protein K06975 K06975; uncharacterized protein
D TH61_12440 hypothetical protein K06975 K06975; uncharacterized protein
D TH61_07020 acetyltransferase K06975 K06975; uncharacterized protein
D TH61_01330 X-Pro dipeptidyl-peptidase K06978 K06978; uncharacterized protein
D TH61_03225 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein
D TH61_06435 membrane protein K07003 K07003; uncharacterized protein
D TH61_02800 alpha/beta hydrolase K07019 K07019; uncharacterized protein
D TH61_13150 flagellar biosynthesis anti-sigma factor FlgM K07054 K07054; uncharacterized protein
D TH61_10215 epimerase K07071 K07071; uncharacterized protein
D TH61_13040 hypothetical protein K07090 K07090; uncharacterized protein
D TH61_09145 membrane protein K07090 K07090; uncharacterized protein
D TH61_01170 hypothetical protein K07090 K07090; uncharacterized protein
D TH61_03295 hypothetical protein K07090 K07090; uncharacterized protein
D TH61_00220 hypothetical protein K07090 K07090; uncharacterized protein
D TH61_13995 phosphodiesterase K07095 K07095; uncharacterized protein
D TH61_03325 DNA mismatch repair protein MutT K07098 K07098; uncharacterized protein
D TH61_00225 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D TH61_00230 transporter K07112 K07112; uncharacterized protein
D TH61_16660 hypothetical protein K07126 K07126; uncharacterized protein
D TH61_14990 FAD-binding protein K07137 K07137; uncharacterized protein
D TH61_01500 oxidoreductase K07140 K07140; MOSC domain-containing protein
D TH61_15330 zinc ribbon domain protein K07164 K07164; uncharacterized protein
D TH61_11345 hypothetical protein K08998 K08998; uncharacterized protein
D TH61_13485 hypothetical protein K08999 K08999; uncharacterized protein
D TH61_07675 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D TH61_15530 hypothetical protein K09122 K09122; uncharacterized protein
D TH61_03335 hypothetical protein K09164 K09164; uncharacterized protein
D TH61_17270 Tat pathway signal protein K09704 K09704; uncharacterized protein
D TH61_10135 hypothetical protein K09726 K09726; uncharacterized protein
D TH61_12085 hypothetical protein K09780 K09780; uncharacterized protein
D TH61_13160 ABC transporter K09781 K09781; uncharacterized protein
D TH61_12060 hypothetical protein K09792 K09792; uncharacterized protein
D TH61_04585 hypothetical protein K09807 K09807; uncharacterized protein
D TH61_10100 hypothetical protein K09807 K09807; uncharacterized protein
D TH61_03195 GntR family transcriptional regulator K00243 K00243; uncharacterized protein
D TH61_06130 hypothetical protein K09973 K09973; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 19, 2024