+E Transcription factors KO
#
Transcription Factors - Salmonella enterica subsp. enterica serovar Choleraesuis
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
D SCH_1995 dcm; DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
#
AProkaryotic type
B Helix-turn-helix
C AraC family
D SCH_0098 araC; transcriptional regulator (AraC/XylS family) for ara operon K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D SCH_1058 hpaA; 4-hydroxyphenylacetate catabolism K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D SCH_3939 rhaR; positive regulator for rhaRS operon (AraC/XylS familiy) K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D SCH_3938 rhaS; positive regulator for rhaBAD operon (AraC/XylS family) K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D SCH_1336 celD; transcriptional repressor of cel operon (AraC/XylS family) K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D SCH_4174 adiY; transcriptional activator of adiA (AraC/XylS family) K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA
D SCH_2453 eutR; putative regulator ethanolamine operon (AraC/XylS family) K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D SCH_4144 soxS; transcriptional activator of superoxide response regulon (AraC/XylS family) K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SCH_1537 marA; transcriptional activator of defense systems (AraC/XylS family), multiple antibiotic resistance protein K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SCH_4431 rob; transcriptional regulator (AraC/XylS family) K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SCH_0612 ramA; putative regulatory protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D SCH_0600 ykgD; putative transcriptional regulator (AraC/XylS family) K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D SCH_4176 melR; regulator of melibiose operon (AraC/XylS family) K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein
D SCH_1290 yeaM; putative regulator (AraC/XylS family) K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D SCH_2044 pocR; Propanediol utilization: transcriptional regulation, AraC family K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D SCH_3119 ygiV; putative bacterial regulatory helix-turn-helix proteins, araC family K13652 K13652; AraC family transcriptional regulator
D SCH_2269 ada; O6-methylguanine-DNA methyltransferase; transcription activator/repressor (AraC/Xyl family) K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D SCH_2922 gcvA; regulator of gcv operon (LysR family) K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SCH_3813 ilvY; positive regulator for ilvC (LysR family) K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SCH_3863 metR; regulator for metE and metH (LysR family) K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SCH_0035 nhaR; transcriptional activator of nhaA (LysR family) K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D SCH_4014 oxyR; regulatory protein sensor for oxidative stress, regulates intracellular hydrogen peroxide (LysR family) K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SCH_3005 iciA; inhibitor of replication initiation, also transcriptional regulator of dnaA and argK (LysR family) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SCH_3191 tdcA; transcriptional activator of tdc operon (LysR family) K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D SCH_0555 ybbS; putative transcriptional regulator, LysR family K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D SCH_1710 cysB; transcriptional regulator for cysteine regulon (LysR familiy) K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SCH_3722 dsdC; transcriptional activator (LysR family) K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D SCH_0712 nacR; putative transcriptional regulator, LysR family K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D SCH_0378 ygiP; putative transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D SCH_V02 spvR; transcriptional activator K19555 spvR; LysR family transcriptional regulator, spv operon transcriptional activator
D SCH_4366 yjiE; putative transcriptional regulator, LysR family K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D SCH_3305 yhcS; putative transcriptional regulator, LysR family K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SCH_3804 yifA; putative transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
C DeoR family
D SCH_0858 deoR; transcriptional repressor for deoxyribose operon (DeoR family) K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SCH_3714 deoR; putative regulatory protein, deoR family K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SCH_3454 glpR; transcriptional repressor of the glp operon (DeoR family) K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SCH_3203 gadR; transcriptional regulator of sugar metabolism K02436 gatR; DeoR family transcriptional regulator, galactitol utilization operon repressor
D SCH_2919 fucR; positive regulator of the fuc operon (DeoR family) K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D SCH_2770 srlR; transcriptional repressor for glucitol operon (DeoR family) K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D SCH_4255 yjfQ; putative transcriptional repressor (DeoR family) K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D SCH_3915 yihW; putative glycerol-3-phosphate regulon repressor (DeoR family) K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
C LacI family
D SCH_2207 galS; transcriptional repressor of mgl operon (GalR/LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCH_3799 rbsR; transcriptional repressor for rbs operon (GalR/LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCH_2950 galR; transcriptional repressor of galETK operon (GalR/LacI family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCH_3597 xylR; xylose operon regulatory protein (AraC/XylS family) K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCH_3983 cytR; transcriptional repressor (GalR/LacI family) K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SCH_0115 fruR; transcriptional repressor of fru operon and others (GlaR/LacI family) K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SCH_4311 treR; transcriptional repressor of treABC (GalR/LacI family) K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D SCH_1449 purR; transcriptional repressor for pur regulon, glyA, glnB, prsA, speA (GalR/LacI family) K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SCH_3473 gntR; transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SCH_3620 lacI; putative transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SCH_4337 idnR; L-idonate regulator (GalR/LacI family) K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D SCH_1482 malI; Maltose regulon regulatory protein malI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
C GntR family
D SCH_0787 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D SCH_3536 yurK; putative regulatory protein, gntR family K03710 K03710; GntR family transcriptional regulator
D SCH_1798 fadR; negative regulator for fad regulon and positive activator of fabA (GntR family) K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D SCH_0150 pdhR; transcriptional repressor for pyruvate dehydrogenase complex (GntR family) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SCH_4362 uxuR; transcriptional repressor for uxu operon K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D SCH_3617 lldR; putative transcriptional regulator for lct operon (GntR family) K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D SCH_3748 dgoR; galactonate operon transcriptional repressor (GntR family) K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor
D SCH_3278 yhcK; putative regulatory protein, gntR family K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
D SCH_2736 mocR; putative regulatory protein, gntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SCH_2726 ygaE; putative transcriptional repressor (GntR familiy) K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator
D SCH_1527 ydfH; putative regulatory protein, gntR family K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor
C TetR/AcrR family
D SCH_005 tetR; RK2 tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D SCH_3655 ttk; putative transcriptional regulator (TetR/ArcR family) K05501 slmA; TetR/AcrR family transcriptional regulator
D SCH_1072 ycdC; putative transcriptional repressor (TetR/AcrR family) K09017 rutR; TetR/AcrR family transcriptional regulator
D SCH_1456 ydhM; putative transcriptional repressor (TetR/AcrR family) K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SCH_3326 envR; transcriptional repressor for envCD (acrEF) (TetR/AcrR family) K18140 envR; TetR/AcrR family transcriptional regulator, acrEF/envCD operon repressor
D SCH_1668 yjgJ; putative bacterial regulatory helix-turn-helix proteins, araC family K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA
D SCH_1163 ycfQ; putative transcriptional repressor (TetR/AcrR family) K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SCH_4016 yijC; putative transcriptional repressor (TetR/AcrR family) K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SCH_0816 ybiH; putative transcriptional repressor (TetR/AcrR family) K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D SCH_0863 ybjK; paral putative regulator (TetR/Acr family) K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D SCH_3789 asnC; transcriptional regulator (AsnC family) for asnA, gidA K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SCH_0913 lrp; regulator for lrp regulon and high-affinity branched-chain amino acid transport system; mediator of of leucine response (AsnC family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SCH_0501 ybaO; putative transcriptional regulator (AsnC familiy) K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
C LuxR family
D SCH_1954 sdiA; transcriptional regulator of ftsQAZ gene cluster (LuxR/UhpA family) K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
D SCH_1987 rcsA; positive transcriptional regulator of capsular/exo-polysaccharide synthesis (LuxR/UhpA family) K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SCH_1090 csgD; putative transcriptional regulator (LuxR/UhpA family) K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D SCH_4400 bglJ; transcriptional regulator (activator) of bgl operon (LuxR/UhpA family) K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D SCH_3447 malT; transcriptional activator of the mal genes, binds inducer (maltotriose) and ATP (LysR familiy) K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
C MarR family
D SCH_1538 marR; transcriptional repressor of marRAB operon, multiple antibiotic resistance protein K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR
D SCH_1462 slyA; transcriptional regulator for hemolysin (MarR family) K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SCH_2747 emrR; transcriptional repressor of emrAB operon (MarR family) K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SCH_2850 hcrR; putative transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
C MerR family
D SCH_021 merD; MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D SCH_0540 cueR; putative heavy metal transcriptional repressor (MerR family) K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SCH_3347 zntR; Zn(II)-responsive transcriptional regulator (MerR family) K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D SCH_4145 soxR; redox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family) K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SCH_0395 hmrR; putative transcriptional regulator K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes
D SCH_2176 yehV; putative transcriptional repressor (MerR family) K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
D SCH_1411 putative regulatory proteins, merR family K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes
C Fur family
D SCH_0713 fur; transcriptional repressor of iron-responsive genes (Fur family) (ferric uptake regulator) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SCH_4120 zur; transcriptional repressor of znuABC operon (Fur family) K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
C IclR family
D SCH_4066 iclR; acetate operon transcriptional repressor (IclR family) K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SCH_0557 allR; putative regulatory protein K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D SCH_1838 kdgR; putative transcriptional repressor (IclR family) K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
C CRP/FNR family
D SCH_3400 crp; catabolite activator protein (CAP), cyclic AMP receptor protein (CRP family) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SCH_1656 fnr; transcriptional regulation of aerobic, anaerobic respiration, osmotic balance (CRP family) K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
D SCH_2538 yfhP; believed to be involved in assembly of Fe-S clusters K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SCH_4243 yjeB; putative negative regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
C XRE family
D SCH_1602 ydcN; putative oxidoreductase/putative repressor K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
C PadR family
C Other families
D SCH_0832 mntR; putative Mn-dependent transcriptional regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SCH_3530 rpiR; Protein rpiR K23238 rpiR; RpiR family transcriptional regulator, repressor of rpiB and als operon
D SCH_1893 yebK; putative transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SCH_4026 birA; biotin-[acetylCoA carboxylase] holoenzyme synthetase/biotin operon transcriptional repressor (BirA family) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SCH_3323 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SCH_4428 trpR; transcriptional repressor for trp operon and aroH (TrpR family) K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D SCH_0408 prpR; regulator for prp operon (EBP family) K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D SCH_3244 nlp; regulatory factor of maltose metabolism K07724 ner; Ner family transcriptional regulator
D SCH_0103 yabN; paral putative periplasmic binding protein of transport system K11925 sgrR; SgrR family transcriptional regulator
D SCH_4425 nadR; three acitivities: regulator of nadAB transcription, regulator of PnuC activity, also contains NMN adenylyltransferase activity K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SCH_0339 cro; regulatory protein cro (Antirepressor) K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D SCH_2634 putative DNA-binding protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D SCH_3693 levR; putative NtrC family transcriptional regulators, ATPase domain K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
D SCH_2772 ygaA; putative regulator (EBP family) K12266 norR; anaerobic nitric oxide reductase transcription regulator
D SCH_2792 fhlA; formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons (EBP family) K15836 fhlA; formate hydrogenlyase transcriptional activator
D SCH_2489 cdaR; putative regulatory protein K02647 cdaR; carbohydrate diacid regulator
D SCH_0210 cdaR; putative inner membrane protein K02647 cdaR; carbohydrate diacid regulator
D SCH_2363 rocR; putative regulatory protein K06714 rocR; arginine utilization regulatory protein
D SCH_0777 modE; transcriptional repressor of modABCD operon (molybdate uptake) K02019 modE; molybdate transport system regulatory protein
D SCH_3697 putative helix-turn-helix protein K07726 K07726; putative transcriptional regulator
D SCH_3580 yiaG; putative transcriptional regulator K07726 K07726; putative transcriptional regulator
D SCH_3923 putative bacterial regulatory protein, merR family K07726 K07726; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
D SCH_3513 nikR; nickel-responsive transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D SCH_3990 metJ; transcriptional repressor of all met genes but metF (MetJ family) K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SCH_1074 putA; putative periplasmic protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SCH_165 relB; translation negative regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SCH_4304 relB; putative helix-turn-helix protein, copG family K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
B Other transcription factors
C BglG family
C Others
D SCH_1623 yohL; putative cytoplasmic protein K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D SCH_2962 yohL; putative cytoplasmic protein K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression
D SCH_0488 bolA; morphogene; putative regulator of murein genes (BolA family) K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SCH_V40 parB; plasmid partition protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCH_1241 sopB; SopB protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCH_153 sopB; SopB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCH_118 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCH_3875 rfaH; transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin K05785 rfaH; transcriptional antiterminator RfaH
D SCH_3298 argR; repressor of arg regulon (ArgR familiy) K03402 argR; transcriptional regulator of arginine metabolism
D SCH_0703 nagC; transcriptional repressor of nag (N-acetylglucosamine) operon (NagC/XylR family) K02565 nagC; N-acetylglucosamine repressor
D SCH_1506 mlc; transcriptional repressor of ptsG and ptsHI, global repressor of carbohydrate metabolism (pts operon) (NagC/XylR family) K15545 mlc; transcriptional regulator of PTS gene
D SCH_3611 mtlR; repressor for mtl K02562 mtlR; mannitol operon repressor
D SCH_1676 tyrR; transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport, has intrinsic ATPase and phosphatase activity (EBP family) K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SCH_2552 cadC; transcriptional activator of cad operon (OmpR family) K03765 cadC; transcriptional activator of cad operon
D SCH_2808 hilA; invasion genes transcription activator K22486 hilA; transcriptional regulator HilA, main transcriptional regulator of SPI1
D SCH_2485 gcvR; transcriptional repressor of gcv operon K03567 gcvR; glycine cleavage system transcriptional repressor
D SCH_1684 pspF; transcription activator K03974 pspF; psp operon transcriptional activator
D SCH_1681 pspC; phage shock protein; regulatory gene, activates expression of psp operon with PspB K03973 pspC; phage shock protein C
D SCH_3963 ydeW; putative transcriptional repressor K11531 lsrR; lsr operon transcriptional repressor
D SCH_0646 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D SCH_3036 yqgE; Protein yqgE K07735 algH; putative transcriptional regulator
D SCH_0062 caiF; transcriptional regulator of cai and fix operon K08277 caiF; transcriptional activator CaiF
D SCH_0186 dksA; dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SCH_0456 ybaD; putative transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D SCH_0320 crl; transcriptional regulator of cryptic csgA gene for curli surface fibers K11926 crl; sigma factor-binding protein Crl
D SCH_3453 rtcR; sigma N (sigma 54)-dependent regulator of rtcBA expression (EBP familiy) K14414 rtcR; transcriptional regulatory protein RtcR
D SCH_0116 yabB; putative cytoplasmic protein K03925 mraZ; transcriptional regulator MraZ
D SCH_0589 fimY; putative regulatory protein K08088 fimY; fimbrial regulator
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024
#
Classification taken and modified from TRANSFAC 7.0