+D GENES KO
#
KEGG Orthology (KO) - Serratia marcescens SM39
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smar00010]
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SM39_3931 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_4746 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SM39_4623 glpX; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SM39_3173 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SM39_3533 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM39_4617 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM39_2617 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_2201 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_3534 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SM39_0706 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_5019 gpmB; probable phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_4562 anaerobic glycerol-3-phosphate dehydrogenase subunit C K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_2243 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_1650 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_1636 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SM39_3606 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SM39_3605 aceF; pyruvate dehydrogenase, dihydrolipoyl transacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_2036 probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM39_3897 putative zinc-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SM39_1597 gluconate 2-dehydrogenase, cytochrome C subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D SM39_1839 aldB; putative chloroacetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_0708 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SM39_2655 agp; glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D SM39_4516 putative hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_2202 putative aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D SM39_4067 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_1551 pckA; phosphoenolpyruvate carboxykinas K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_4040 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_4885 ascB; cryptic 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_4374 bglB; cryptic phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_0155 bglA; putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_1935 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_3061 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SM39_1384 ptsG; fused glucose-specific PTS enzymes: IIB component/IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SM39_1125 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1718 malX; maltose-specific PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_4886 ascF; fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:smar00020]
D SM39_0677 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SM39_2104 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SM39_3602 acnB; bifunctional aconitate hydratase2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SM39_1506 icdA; isocitrate dehydrogenase, specific for NADP+ K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SM39_0682 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SM39_0683 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_0685 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SM39_0684 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SM39_0680 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_0681 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_0678 sdhC; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SM39_0679 sdhD; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SM39_4698 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_4697 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_4696 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D SM39_4695 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D SM39_3615 fumA; fumarate hydratase, aerobic, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SM39_1728 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SM39_4751 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SM39_0967 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SM39_4067 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_1551 pckA; phosphoenolpyruvate carboxykinas K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_3606 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SM39_3605 aceF; pyruvate dehydrogenase, dihydrolipoyl transacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM39_2036 probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:smar00030]
D SM39_3931 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM39_2240 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM39_0725 pgl; 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SM39_3833 putative exported carbohydrate degradation protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SM39_1046 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SM39_4052 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SM39_2914 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2915 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_3094 tktB; transketolase 2, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2099 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2100 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_3546 tktA; transketolase 1, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_3093 talA; transaldolase A K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SM39_0007 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SM39_3522 rpiA; ribose 5-phosphate isomerase, constitutive K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SM39_4842 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SM39_1088 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SM39_4998 deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SM39_4495 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SM39_4113 predicted mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM39_5000 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_4799 phnN; ATP-binding protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D SM39_1463 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM39_3949 edd; 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D SM39_3950 multifunctional 2-keto-3-deoxygluconate6-phosphate aldolase and 2-keto-4-hydroxyglutaratealdolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SM39_2239 eda; multifunctional 2-keto-3-deoxygluconate6-phosphate aldolase and 2-keto-4-hydroxyglutaratealdolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SM39_2583 gcd; glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D SM39_1596 gluconate 2-dehydrogenase, flavoprotein subunit K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D SM39_1595 putative exported protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D SM39_4428 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SM39_3947 gntK; gluconate kinase 2 K00851 idnK; gluconokinase [EC:2.7.1.12]
D SM39_4107 idnK; thermoresistant gluconokinase 1 K00851 idnK; gluconokinase [EC:2.7.1.12]
D SM39_4190 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SM39_4426 putative carbohydrate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D SM39_3173 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SM39_3533 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM39_4746 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SM39_4623 glpX; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:smar00040]
D SM39_3774 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D SM39_3773 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D SM39_2804 uxuA; mannonate hydrolase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D SM39_2806 uxuB; putative D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D SM39_2181 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SM39_2182 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1015 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1016 predicted subunit with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1038 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_2760 sgbK; putative L-xylulose/3-keto-L-gulonate kinase 1 K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D SM39_4090 ulaD; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SM39_4089 ulaE; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SM39_2759 sgbU; putative L-ribulose-5-phosphate 3-epimerase 1 K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SM39_4088 ulaF; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SM39_2758 sgbE; L-ribulose-5-phosphate 4-epimerase 1 K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SM39_4052 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SM39_2159 xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D SM39_2157 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D SM39_2158 putative xylitol dehydrogenase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D SM39_1305 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D SM39_4168 putative carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:smar00051]
D SM39_0352 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM39_3669 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM39_1725 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SM39_1036 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SM39_1035 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SM39_1025 GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SM39_4975 putative short chain dehydrogenase K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D SM39_4974 amidohydrolase K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D SM39_4973 putative mandelate racemase/muconate lactonizing protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D SM39_4971 putative short chain dehydrogenase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_4746 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SM39_4623 glpX; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SM39_4413 mtlD; mannitol-1-phosphate dehydrogenase, NAD(P)-binding K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SM39_3178 srlD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SM39_2795 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SM39_3173 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SM39_3533 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM39_4617 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM39_1026 predicted NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D SM39_3491 putative sugar kinase K00881 alsK; allose kinase [EC:2.7.1.55]
D SM39_3492 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D SM39_2794 fruA; fused fructose-specific PTS enzymes: IIB component/IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM39_2291 manX; fused mannose-specific PTS enzymes: IIAcomponent/IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM39_2292 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D SM39_2293 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D SM39_4414 mtlA; fused mannitol-specific PTS enzymes: IIAcomponents/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SM39_2907 putative phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D SM39_1585 putative phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D SM39_3177 srlB; glucitol/sorbitol-specific enzyme IIA component of PTS K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SM39_3176 srlE; glucitol/sorbitol-specific enzyme IIB component of PTS K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SM39_3175 srlA; glucitol/sorbitol-specific enzyme IIC component of PTS K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:smar00052]
D SM39_0708 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SM39_0709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM39_0710 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SM39_1037 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_4552 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_2182 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1015 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1016 predicted subunit with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1038 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SM39_2664 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SM39_1446 ebgA; cryptic beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D SM39_1447 ebgC; cryptic beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D SM39_1042 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_2006 D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D SM39_3672 scrB; intracellular alpha-D-fructohydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM39_1548 cscA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM39_3203 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SM39_0365 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SM39_3447 agaF; putative N-acetylgalactosamine-specific PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM39_3450 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SM39_3449 agaW; putative N-acetylgalactosamine-specific PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SM39_3448 agaE; putative N-acetylgalactosamine-specific PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SM39_2005 putative tagatose-6-phosphate ketose/aldoseisomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:smar00053]
D SM39_2181 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SM39_2180 uge; UDP galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SM39_2918 PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_4091 ulaC; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_2917 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_4092 ulaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_2916 putative PTS system, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SM39_4093 ulaA; L-ascorbate-specific enzyme IIC component of PTS K03475 ulaA; ascorbate PTS system EIIC component
D SM39_4094 ulaG; predicted L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D SM39_4090 ulaD; 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SM39_4089 ulaE; L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SM39_2759 sgbU; putative L-ribulose-5-phosphate 3-epimerase 1 K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SM39_4088 ulaF; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SM39_2758 sgbE; L-ribulose-5-phosphate 4-epimerase 1 K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SM39_2760 sgbK; putative L-xylulose/3-keto-L-gulonate kinase 1 K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D SM39_1305 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:smar00500]
D SM39_3295 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3671 scrA; sucrose-specific PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3259 PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3672 scrB; intracellular alpha-D-fructohydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM39_1548 cscA; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SM39_3203 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SM39_0365 malZ; maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SM39_2182 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1015 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1016 predicted subunit with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1038 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_0800 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SM39_4353 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SM39_4039 putative lactose/cellobiose-specific PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SM39_0153 chbB; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SM39_0154 chbC; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS K02761 celB; cellobiose PTS system EIIC component
D SM39_4040 glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_4885 ascB; cryptic 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_4374 bglB; cryptic phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_0155 bglA; putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_1935 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SM39_4102 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SM39_4101 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SM39_4104 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SM39_4086 malP; maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SM39_4100 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SM39_4103 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D SM39_0826 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SM39_4430 malS; exported alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SM39_4085 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SM39_3061 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SM39_1125 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1718 malX; maltose-specific PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1484 PTS system, EIIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SM39_4906 putative glycosyl transferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D SM39_4816 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SM39_4815 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SM39_3931 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM39_0352 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM39_3669 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smar00520]
D SM39_2198 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SM39_3089 chiB; chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SM39_4365 chiA; endo-chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SM39_0641 chiC; chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SM39_1732 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SM39_1395 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SM39_4819 putative chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_0650 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_3061 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SM39_0646 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SM39_1479 nagK; N-acetyl-D-glucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D SM39_0644 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SM39_0645 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SM39_0352 mak; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM39_3669 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SM39_4469 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM39_4769 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SM39_4470 glmU; fused N-acetyl glucosamine-1-phosphateuridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SM39_3260 predicted PTS component K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SM39_1680 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SM39_3811 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM39_4241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM39_1126 putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SM39_4337 rffE; UDP-N-acetyl-D-glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM39_4336 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SM39_1617 arnA; fused UDP-L-Ara4N formyltransferase/UDP-GlcAC-4'-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SM39_1615 arnB; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulosediphosphate) aminotransferase, PLP-dependent K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SM39_1616 arnC; undecaprenyl phosphate-L-Ara4FN transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SM39_1618 arnD; putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SM39_1384 ptsG; fused glucose-specific PTS enzymes: IIB component/IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SM39_1125 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1718 malX; maltose-specific PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_2182 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1015 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1016 predicted subunit with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1038 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_2181 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SM39_0709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM39_0710 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SM39_1037 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_4552 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_1042 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SM39_2180 uge; UDP galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SM39_2291 manX; fused mannose-specific PTS enzymes: IIAcomponent/IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM39_2292 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D SM39_2293 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D SM39_3931 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM39_1725 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SM39_1036 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SM39_1035 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SM39_1025 GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SM39_1026 predicted NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D SM39_4102 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:smar00620]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_2036 probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SM39_3606 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SM39_3605 aceF; pyruvate dehydrogenase, dihydrolipoyl transacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_1154 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_3897 putative zinc-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SM39_1597 gluconate 2-dehydrogenase, cytochrome C subunit K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D SM39_2910 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM39_2911 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM39_2243 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_1650 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_3372 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM39_3873 accB; acetyl-CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM39_3874 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM39_2935 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM39_1266 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SM39_1839 aldB; putative chloroacetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D SM39_3456 lldD; DNA-binding transcriptional repressor K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D SM39_1128 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D SM39_2032 ldhA; fermentative D-lactate dehydrogenase, NAD-dependent K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SM39_0793 dld; D-lactate dehydrogenase, FAD-binding, NADH independent K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D SM39_2072 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SM39_0316 dioxygenase superfamily protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SM39_1665 gloA; glyoxalase I, Ni-dependent K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SM39_0191 gloB; predicted hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SM39_1182 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SM39_2702 Hsp31 molecular chaperone K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SM39_1404 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SM39_4428 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SM39_1001 sfcA; malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SM39_3084 maeB; fused malic enzyme predicted oxidoreductase/predicted phosphotransacetylase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SM39_4751 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SM39_0967 mqo; malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SM39_3615 fumA; fumarate hydratase, aerobic, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SM39_1728 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SM39_4698 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_4697 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_4696 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D SM39_4695 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D SM39_4640 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SM39_4067 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_1551 pckA; phosphoenolpyruvate carboxykinas K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SM39_1636 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SM39_3953 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_1344 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SM39_0059 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smar00630]
D SM39_3952 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_3953 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D SM39_4751 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SM39_0677 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SM39_2104 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SM39_3602 acnB; bifunctional aconitate hydratase2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_2876 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D SM39_1404 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SM39_4428 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SM39_4051 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_3236 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM39_3511 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SM39_3513 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3512 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SM39_0487 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D SM39_0488 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D SM39_0489 glxR; tartronate semialdehyde reductase, NADH-dependent K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D SM39_0463 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_0491 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_3537 tartrate dehydrogenase/decarboxylase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SM39_3950 multifunctional 2-keto-3-deoxygluconate6-phosphate aldolase and 2-keto-4-hydroxyglutaratealdolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SM39_2239 eda; multifunctional 2-keto-3-deoxygluconate6-phosphate aldolase and 2-keto-4-hydroxyglutaratealdolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SM39_1788 putative oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D SM39_4403 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SM39_4402 fdoH; formate dehydrogenase-O, Fe-S subunit FdoH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SM39_4401 fdoI; formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D SM39_1824 putative lipase/esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D SM39_2186 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SM39_1542 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:smar00640]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_2910 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM39_2911 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_1154 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM39_3869 putative zinc-binding alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_3372 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM39_3873 accB; acetyl-CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM39_3874 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM39_2935 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM39_3763 puuE; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SM39_4939 putative omega-amino acid-pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SM39_0684 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SM39_0685 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SM39_4938 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4131 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_0903 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D SM39_0904 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D SM39_3602 acnB; bifunctional aconitate hydratase2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SM39_0902 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D SM39_1214 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D SM39_3680 putative iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D SM39_3710 gldA; glycerol dehydrogenase, NAD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:smar00650]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_4921 3-hydroxyacyl-CoA dehydrogenase, NAD-binding subunit K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_1299 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_2561 paaH; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_1424 putative short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM39_3537 tartrate dehydrogenase/decarboxylase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D SM39_1768 maiA; maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D SM39_0680 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_0681 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_0678 sdhC; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SM39_0679 sdhD; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SM39_4698 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_4697 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_4696 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D SM39_4695 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D SM39_3763 puuE; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SM39_2575 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3540 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3762 putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1154 pflB; pyruvate formate lyase I K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SM39_2036 probable pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D SM39_4918 putative succinyl-CoA:3-ketoacid CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SM39_4919 putative succinyl-CoA:3-ketoacid CoA transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SM39_4923 putative D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D SM39_4201 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0048 ilvB; acetolactate synthase I, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0062 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3548 putative thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3045 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0047 ilvN; acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_0063 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_4200 ilvM; acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SM39_3046 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SM39_1526 putative short chain dehydrogenase K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:smar00660]
D SM39_4201 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0048 ilvB; acetolactate synthase I, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0062 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3548 putative thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3045 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0047 ilvN; acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_0063 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_4200 ilvM; acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SM39_3046 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SM39_0684 sucC; succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SM39_0685 sucD; succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SM39_0057 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SM39_0056 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SM39_0058 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:smar00562]
D SM39_3662 putative phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D SM39_3231 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM39_1959 putative monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM39_4126 iolG; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D SM39_4134 putative sugar isomerase K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D SM39_4124 iolE; 2-keto-myo-inositol dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D SM39_4127 iolD; probable malonic semialdehyde oxidativedecarboxylase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D SM39_4130 iolB; putative myo-inositol catabolism protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D SM39_4128 iolC; putative myo-inositol catabolism carbohydratekinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D SM39_4938 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4131 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4617 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smar00190]
D SM39_2902 nuoA; NADH:ubiquinone oxidoreductase, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SM39_2901 nuoB; NADH:ubiquinone oxidoreductase, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SM39_2900 nuoC; NADH:ubiquinone oxidoreductase, chain C,D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D SM39_2899 nuoE; NADH-quinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SM39_2898 nuoF; NADH:ubiquinone oxidoreductase, chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SM39_2897 nuoG; NADH-quinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SM39_2896 nuoH; NADH:ubiquinone oxidoreductase, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SM39_2895 nuoI; NADH:ubiquinone oxidoreductase, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SM39_2894 nuoJ; NADH-quinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SM39_2893 nuoK; NADH-quinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SM39_2892 nuoL; NADH:ubiquinone oxidoreductase, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SM39_2891 nuoM; NADH:ubiquinone oxidoreductase, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SM39_2890 nuoN; NADH:ubiquinone oxidoreductase, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SM39_1397 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SM39_3122 putative pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SM39_0680 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_0681 sdhB; succinate dehydrogenase, FeS subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_0678 sdhC; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SM39_0679 sdhD; succinate dehydrogenase, membrane subunit, bind cytochrome b556 K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SM39_4698 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_4697 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_4696 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D SM39_4695 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D SM39_0392 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SM39_0393 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SM39_0394 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SM39_0395 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D SM39_0396 cyoA; cytochrome o ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D SM39_2330 cioA; terminal oxidase subunit II K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SM39_0687 cydA; cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SM39_2331 cioB; terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SM39_0688 cydB; cytochrome d terminal oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SM39_0689 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SM39_4474 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SM39_4472 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SM39_4473 atpG; F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SM39_4475 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SM39_4471 atpC; F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SM39_4478 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SM39_4476 atpF; F0 sector of membrane-bound ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SM39_4477 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SM39_4744 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SM39_1870 putative phosphoesterase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D SM39_3151 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SM39_1992 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:smar00680]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_0990 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SM39_4403 fdoG; formate dehydrogenase-O, large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SM39_4402 fdoH; formate dehydrogenase-O, Fe-S subunit FdoH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SM39_4401 fdoI; formate dehydrogenase-O subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D SM39_3236 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_4640 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SM39_4751 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SM39_3173 fbaB; fructose-bisphosphate aldolase, class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SM39_3533 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SM39_4746 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SM39_4623 glpX; fructose-1,6-bisphosphatase II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_2798 trimethylamine N-oxide reductase I, cytochrome C-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D SM39_2799 bisC; biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D SM39_2910 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D SM39_2911 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_1636 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SM39_0706 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_5019 gpmB; probable phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_4562 anaerobic glycerol-3-phosphate dehydrogenase subunit C K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SM39_3521 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SM39_1160 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SM39_5003 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:smar00910]
D SM39_2360 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SM39_1878 nitrate-binding proteint K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SM39_1879 putative nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D SM39_1880 putative nitrate ABC transporter K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SM39_2346 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2345 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2343 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SM39_1885 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D SM39_1884 nitrite reductase, large subunit, NAD(P)H-binding K00361 nasB; nitrite reductase [NAD(P)H] [EC:1.7.1.4]
D SM39_4046 nirB; nitrite reductase, large subunit, NAD(P)H-binding K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D SM39_4047 nirD; nitrite reductase (NAD(P)H) small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D SM39_1130 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D SM39_2717 2-nitropropane dioxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SM39_1910 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SM39_4163 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_3799 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SM39_3800 gltD; glutamate synthase, 4Fe-4S protein, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SM39_0975 cynS; cyanate aminohydrolase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D SM39_0499 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SM39_0976 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D SM39_0912 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D SM39_3595 can; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:smar00920]
D SM39_3069 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SM39_4616 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SM39_3068 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SM39_3067 cysW; sulphate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SM39_3066 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SM39_4021 tauA; taurine transporter subunit K15551 tauA; taurine transport system substrate-binding protein
D SM39_4019 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D SM39_4020 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SM39_4018 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D SM39_1192 ssuA; putative aliphatic sulfonates ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SM39_1190 ssuC; putative aliphatic sulfonates ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SM39_1189 ssuB; alkanesulfonate transporter subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SM39_1191 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D SM39_1193 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SM39_0130 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SM39_0129 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SM39_0131 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SM39_4736 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SM39_0124 cysH; 3'-phosphoadenosine 5'-phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SM39_0122 cysJ; sulfite reductase, alpha subunit, flavoprotein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SM39_0791 putative oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SM39_0123 cysI; sulfite reductase, beta subunit, NAD(P)-binding, heme-binding K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SM39_0111 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D SM39_1835 hypothetical protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D SM39_2832 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D SM39_2834 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D SM39_2833 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D SM39_0868 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SM39_4096 glpE; thiosulfate:cyanide sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D SM39_4567 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SM39_0412 putative pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM39_3058 cysK; cysteine synthase A, O-acetylserinesulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM39_3954 metA; homoserine O-transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SM39_4637 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smar00061]
D SM39_3372 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SM39_3873 accB; acetyl-CoA carboxylase, BCCP subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SM39_3874 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SM39_2935 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SM39_1377 acpP; acyl carrier protein ACP K02078 acpP; acyl carrier protein
D SM39_1375 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM39_2342 putative 3-oxoacyl-(acyl-carrier-protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM39_1374 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM39_2963 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SM39_1203 putative 3-oxoacyl-[acyl-carrier-protein]synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_1378 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_3894 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_2504 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4956 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4376 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1376 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_3328 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1205 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SM39_3377 fabZ; (3R)-hydroxymyristoyl acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_1831 putative thioesterase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_1424 putative short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SM39_2232 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_1911 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_0061 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:smar00071]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_0253 fadE; acyl coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D SM39_2232 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_1911 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_0061 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_3434 aas; fused 2-acylglycerophospho-ethanolamine acyltransferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SM39_3555 putative pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smar00561]
D SM39_0463 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_0491 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_3897 putative zinc-binding alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SM39_3709 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SM39_3708 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SM39_3707 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SM39_3710 gldA; glycerol dehydrogenase, NAD K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SM39_4624 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM39_2093 putative carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM39_3915 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SM39_1373 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SM39_3724 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM39_3693 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SM39_2738 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SM39_3914 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:smar00564]
D SM39_4566 gpsA; NAD(P)H-dependent glycerol-3-phosphatedehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SM39_4301 glpA; sn-glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SM39_4099 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SM39_4300 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D SM39_4299 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D SM39_3915 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SM39_3724 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM39_3693 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SM39_2738 putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SM39_3914 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SM39_3662 putative phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
D SM39_4309 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SM39_4305 pldB; lysophospholipase L(2) K01048 pldB; lysophospholipase [EC:3.1.1.5]
D SM39_4303 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SM39_4270 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SM39_3434 aas; fused 2-acylglycerophospho-ethanolamine acyltransferase/acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D SM39_3049 putative ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D SM39_3048 putative ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D SM39_0809 putative CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D SM39_3859 putative CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D SM39_4187 putative CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D SM39_3382 cdsA; CDP-diglyceride synthase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SM39_3349 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SM39_4701 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SM39_1320 pgsA; CDP-diacylglycerol--glycerol-3-phosphate3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SM39_0380 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D SM39_2102 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D SM39_3258 putative membrane protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D SM39_2167 cls; cardiolipin synthase 1 K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SM39_1876 putative phospholipase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:smar00565]
D SM39_4309 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SM39_3662 putative phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:smar00600]
D SM39_2664 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SM39_4819 putative chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_0650 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D SM39_4309 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism [PATH:smar00591]
D SM39_4309 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SM39_2335 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D SM39_2336 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:smar00592]
D SM39_4309 pldA; outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:smar01040]
D SM39_0504 tesA; acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SM39_0418 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SM39_2149 putative thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smar00230]
D SM39_3703 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SM39_4062 nudE; ADP compounds hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D SM39_4113 predicted mutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM39_5000 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_1463 prsA; phosphoribosylpyrophosphate synthase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SM39_2931 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SM39_4209 purD; phosphoribosylglycinamide synthetasephosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SM39_3137 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SM39_2283 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D SM39_3254 purL; phosphoribosylformyl-glycineamide synthetase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SM39_3136 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SM39_0508 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SM39_0509 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SM39_3110 purC; phosphoribosylaminoimidazole-succinocarboxamidesynthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SM39_1499 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SM39_4208 purH; fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM39_0455 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SM39_0468 ushA; bifunctional UDP-sugarhydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SM39_0141 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SM39_0642 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SM39_4064 putative hydrolase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D SM39_0465 gsk; inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D SM39_3690 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM39_5001 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM39_0350 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SM39_0185 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SM39_3857 iunH; inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D SM39_3596 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SM39_3201 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SM39_3219 ndk; multifunctional nucleoside diphosphate kinaseand apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SM39_5018 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D SM39_3627 rdgB; dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SM39_0269 gpt; guanine-hypoxanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SM39_3200 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_3770 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_1998 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_0089 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SM39_1754 guaD; guanine aminohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D SM39_4527 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SM39_2868 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_3325 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_2869 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM39_3326 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM39_4812 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SM39_0103 dgt; deoxyguanosine triphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D SM39_2905 putative 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SM39_4525 spoT; bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SM39_4344 gppA; guanosine pentaphosphatase/exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SM39_3152 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SM39_0107 relA; (p)ppGpp synthetase I/GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D SM39_4322 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D SM39_0668 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D SM39_4715 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SM39_1713 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SM39_2627 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D SM39_3403 putative lysine decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SM39_0686 putative 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SM39_4735 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SM39_0460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SM39_0108 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SM39_3701 icc; putative cyclic 3',5'-adenosine monophosphate phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D SM39_0036 apaH; diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D SM39_0131 cysC; adenosine 5'-phosphosulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SM39_0130 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SM39_0129 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SM39_0244 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SM39_0494 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SM39_0243 serine-pyruvate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D SM39_0492 hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D SM39_0485 allA; ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D SM39_0495 allD; ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D SM39_0499 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:smar00240]
D SM39_0028 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SM39_0027 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SM39_4823 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SM39_4822 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SM39_3836 putative amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SM39_1366 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SM39_1194 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SM39_4535 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SM39_2087 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SM39_3386 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SM39_3219 ndk; multifunctional nucleoside diphosphate kinaseand apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SM39_0108 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SM39_3864 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SM39_3768 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D SM39_0109 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SM39_1162 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SM39_2189 nudG; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D SM39_1010 udk; uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SM39_0468 ushA; bifunctional UDP-sugarhydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SM39_0141 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SM39_0642 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SM39_3857 iunH; inosine-uridine preferring nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D SM39_4263 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D SM39_0350 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D SM39_3135 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SM39_0686 putative 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SM39_4735 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D SM39_0627 rihA; ribonucleoside hydrolase 1 K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-]
D SM39_3403 putative lysine decarboxylase K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SM39_1002 cdd; cytidine/deoxycytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SM39_4045 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SM39_4812 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SM39_1011 dcd; 2'-deoxycytidine 5'-triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SM39_2868 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_3325 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_2869 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM39_3326 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM39_2905 putative 5'-nucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D SM39_1381 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SM39_4537 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SM39_4999 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D SM39_2178 tdk; thymidine kinase/deoxyuridine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SM39_3424 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SM39_1987 putative L-N-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SM39_1749 NADP-dependent L-serine/L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smar00250]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_3275 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SM39_1159 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM39_2196 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM39_0983 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SM39_4485 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SM39_0640 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SM39_0245 putative carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SM39_2904 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM39_4682 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D SM39_4644 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SM39_4645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SM39_4715 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SM39_1499 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SM39_4823 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SM39_4822 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D SM39_3763 puuE; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SM39_2575 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3540 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3762 putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3799 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SM39_3800 gltD; glutamate synthase, 4Fe-4S protein, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SM39_1910 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SM39_4163 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM39_2388 putA; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_0028 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SM39_0027 carA; carbamoyl phosphate synthetase small subunit, glutamine amidotransferase K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SM39_3630 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SM39_4469 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM39_2931 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:smar00260]
D SM39_3933 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM39_0002 thrA; fused aspartokinase I and homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SM39_4638 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SM39_4105 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM39_0003 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SM39_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SM39_1127 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SM39_3236 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM39_1404 2-ketoacid reductase K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D SM39_4428 tkrA; 2-ketogluconate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SM39_0463 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_0491 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SM39_0706 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_5019 gpmB; probable phosphoglycerate mutase 2 K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_4562 anaerobic glycerol-3-phosphate dehydrogenase subunit C K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SM39_3521 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SM39_1160 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SM39_5003 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SM39_1749 NADP-dependent L-serine/L-allo-threonine dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SM39_4558 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SM39_4559 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D SM39_1297 putative aminotransferase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SM39_3511 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SM39_3513 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3512 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SM39_3349 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SM39_0957 betA; choline dehydrogenase, a flavoprotein K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D SM39_0956 betB; betaine aldehyde dehydrogenase, NAD-dependent K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D SM39_1070 cystathionine beta-lyase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SM39_1069 putative cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SM39_2288 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM39_1085 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM39_4197 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM39_4440 putative pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM39_1940 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SM39_3020 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SM39_2141 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SM39_2140 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SM39_1865 dat; diaminobutyrate-2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D SM39_1864 ddc; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:smar00270]
D SM39_4567 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SM39_0412 putative pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM39_3058 cysK; cysteine synthase A, O-acetylserinesulfhydrolase A subunit K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SM39_1069 putative cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SM39_3677 metC; cystathionine beta-lyase, PLP-dependent K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_1717 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_2266 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_4010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_1070 cystathionine beta-lyase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SM39_3083 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D SM39_3945 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SM39_3529 putative methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM39_4265 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM39_3569 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SM39_3600 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SM39_3599 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SM39_4838 putative N-acyl homoserine lactone synthase, LuxI homolog K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D SM39_0102 mtn; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SM39_1092 putative 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SM39_0251 mtnK; putative methylthioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D SM39_0185 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SM39_0250 mtnA; putative methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D SM39_0247 mtnB; putative methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D SM39_0248 masA; methionine salvage pathway enzyme K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D SM39_0249 mtnD; putative 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SM39_0113 l-methionine-gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D SM39_1569 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SM39_0774 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SM39_0167 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SM39_3933 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM39_0002 thrA; fused aspartokinase I and homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SM39_4638 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SM39_4105 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM39_3954 metA; homoserine O-transsuccinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SM39_4637 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SM39_4199 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM39_0166 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SM39_3619 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_0868 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SM39_3020 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SM39_2393 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D SM39_4751 mdh; malate dehydrogenase, NAD(P)-binding K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SM39_2288 sdaA; L-serine deaminase I K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM39_1085 sdaB; L-serine deaminase II K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SM39_3065 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D SM39_3521 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SM39_1160 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:smar00280]
D SM39_4199 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_4938 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4131 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4939 putative omega-amino acid-pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SM39_4918 putative succinyl-CoA:3-ketoacid CoA transferase, subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SM39_4919 putative succinyl-CoA:3-ketoacid CoA transferase, subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smar00290]
D SM39_4197 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM39_4440 putative pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SM39_0057 leuC; 3-isopropylmalate isomerase subunit, dehydratase component K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SM39_0056 leuD; 3-isopropylmalate isomerase subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SM39_0058 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SM39_4201 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0048 ilvB; acetolactate synthase I, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0062 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3548 putative thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3045 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0047 ilvN; acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_0063 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_4200 ilvM; acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SM39_4193 ilvC; ketol-acid reductoisomerase, NAD(P)-binding K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SM39_4198 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM39_4199 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM39_4431 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D SM39_2904 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM39_1344 putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SM39_0059 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:smar00300]
D SM39_3933 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM39_0002 thrA; fused aspartokinase I and homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SM39_4638 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SM39_4105 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM39_1686 putative lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_3112 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_1950 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_0026 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SM39_3392 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SM39_4030 argD; bifunctional acetylornithine aminotransferase/succinyl diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SM39_3104 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SM39_4319 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SM39_3440 lysA; diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SM39_0070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SM39_0071 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:smar00310]
D SM39_0683 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_3020 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SM39_3371 ldcC; lysine decarboxylase 2, constitutive K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D SM39_3366 cadA; lysine decarboxylase, inducible K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D SM39_3240 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_3245 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_2575 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3540 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3762 putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1436 putative FAD dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D SM39_1168 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D SM39_1638 putative FAD-binding oxidase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D SM39_1303 putative dehydrogenase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
C 00220 Arginine biosynthesis [PATH:smar00220]
D SM39_4826 argI; ornithine carbamoyltransferase chain I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SM39_4644 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SM39_4645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SM39_0852 putative amidolyase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D SM39_0851 putative amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D SM39_3630 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_1910 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SM39_4163 gdhA; glutamate dehydrogenase, NADP-specific K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SM39_0499 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_2904 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM39_3415 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D SM39_4643 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SM39_4642 argC; N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SM39_4030 argD; bifunctional acetylornithine aminotransferase/succinyl diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SM39_4641 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:smar00330]
D SM39_4045 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SM39_3566 speA; biosynthetic arginine decarboxylase, PLP-binding K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D SM39_3565 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D SM39_1924 putative peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D SM39_4793 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SM39_3636 speC; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SM39_3599 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SM39_3600 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SM39_3239 hypothetical protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D SM39_3240 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_3245 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_3138 speG; spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D SM39_1059 agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D SM39_2325 astA; arginine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D SM39_2323 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D SM39_2326 astC; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D SM39_2324 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D SM39_2322 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D SM39_4908 putative glutamate-ammonia ligase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D SM39_2780 gamma-glutamylputrescine synthetase 2 K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D SM39_1531 puuA; gamma-glutamylputrescine synthetase 1 K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D SM39_4944 tynA; putative tyramine oxidase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SM39_1527 puuB; gamma-glutamylputrescine oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SM39_1949 putative aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D SM39_1528 puuC; gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D SM39_1530 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D SM39_3624 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SM39_2388 putA; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SM39_0272 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SM39_0273 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SM39_1413 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:smar00340]
D SM39_1056 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SM39_1049 hisI; fused phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SM39_1051 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SM39_1052 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SM39_1050 hisF; imidazole glycerol phosphate synthase, catalytic subunit with HisH K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SM39_1053 hisB; fusedhistidinol-phosphatase/imidazoleglycerol-phosphatedehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_1055 hisD; bifunctional histidinal dehydrogenase/histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SM39_0115 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SM39_0116 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SM39_1543 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SM39_1545 putative chlorohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D SM39_1542 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:smar00350]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SM39_2827 mhbI; putative maleylpyruvate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SM39_0303 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM39_4967 hpaB; 4-hydroxyphenylacetate 3-monooxygenase oxygenase component K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D SM39_4968 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D SM39_4960 hpcC; 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D SM39_4962 hpcD; 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D SM39_4958 hpcE1; 4-hydroxyphenylacetate degradation protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D SM39_4959 hpcE2; 4-hydroxyphenylacetate degradation protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D SM39_4963 hpcG; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D SM39_4964 hpcH; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D SM39_2575 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3540 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3762 putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_0589 putative alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D SM39_2829 mhbD; gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D SM39_2828 mhbH; putative fumarylpyruvate hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
D SM39_1490 putative malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
C 00360 Phenylalanine metabolism [PATH:smar00360]
D SM39_0303 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SM39_2564 paaK; phenylacetyl-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D SM39_2562 paaI; predicted thioesterase K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D SM39_2554 paaA; predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D SM39_2555 paaB; predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D SM39_2556 paaC; predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D SM39_2557 paaD; predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D SM39_2558 paaE; predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D SM39_2560 paaG; acyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D SM39_2553 paaZ; phenylacetic acid degradation protein K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D SM39_2563 paaJ; probable beta-ketoadipyl CoA thiolase K02615 paaJ; 3-oxo-5,6-didehydrosuberyl-CoA/3-oxoadipyl-CoA thiolase [EC:2.3.1.223 2.3.1.174]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4921 3-hydroxyacyl-CoA dehydrogenase, NAD-binding subunit K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_1299 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_2561 paaH; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SM39_4122 putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D SM39_0589 putative alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D SM39_2217 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SM39_1490 putative malate/L-lactate dehydrogenase K13574 hcxB; hydroxycarboxylate dehydrogenase B [EC:1.1.1.237 1.1.1.-]
D SM39_2712 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D SM39_3555 putative pyridine nucleotide-disulphide oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:smar00380]
D SM39_2497 putative tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D SM39_0472 putative tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D SM39_1824 putative lipase/esterase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D SM39_0683 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_3023 indole-3-pyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D SM39_2876 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D SM39_2712 katG; catalase/hydroperoxidase HPI(I) K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smar00400]
D SM39_0703 aroG; 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase, phenylalanine repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_1634 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_0179 aroF; 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase, tyrosine-repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_4055 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SM39_3872 putative dehydroquinase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SM39_2613 putative 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D SM39_3956 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SM39_2615 glucose dehydrogenase K05358 quiA; quinate dehydrogenase (quinone) [EC:1.1.5.8]
D SM39_4056 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SM39_0335 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SM39_1161 aroA; 5-enolpyruvylshikimate-3-phosphate synthetase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SM39_2969 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SM39_2136 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SM39_2137 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SM39_2138 trpD; anthranilate synthase component 2 K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SM39_2139 trpC; fused indole-3-glycerolphosphatesynthetase/N-(5-phosphoribosyl)anthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D SM39_2141 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SM39_2140 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SM39_0180 tyrA; fused chorismate mutase T/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SM39_1540 putative chorismate mutase precursor K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D SM39_0181 pheA; fused chorismate mutase P/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D SM39_3903 pheC; putative cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:smar00410]
D SM39_3591 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SM39_3763 puuE; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SM39_3239 hypothetical protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D SM39_3240 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_3245 aldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D SM39_3590 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SM39_1987 putative L-N-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SM39_4939 putative omega-amino acid-pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4938 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SM39_4131 aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:smar00430]
D SM39_1926 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_0366 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_4018 tauD; alpha-ketoglutarate-dependent taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D SM39_2911 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SM39_2910 ackA; acetate kinase A and propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:smar00440]
D SM39_1582 phnX; phosphonoacetaldehyde phosphonohydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D SM39_1581 phnW; 2-aminoethylphosphonate: pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D SM39_4804 phnI; phosphonate metabolism protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D SM39_4806 phnG; carbon-phosphorus lyase complex subunit K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D SM39_4805 phnH; carbon-phosphorus lyase complex subunit K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D SM39_4801 phnL; carbon-phosphorus lyase complex subunit K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D SM39_4800 phnM; carbon-phosphorus lyase complex subunit K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D SM39_4803 phnJ; phosphonate metabolism protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D SM39_4797 phnP; carbon-phosphorus lyase complex accessory protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:smar00450]
D SM39_4637 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SM39_3677 metC; cystathionine beta-lyase, PLP-dependent K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_1717 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_2266 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_4010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_3945 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SM39_3529 putative methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM39_4265 metE; 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SM39_1069 putative cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SM39_0113 l-methionine-gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D SM39_1646 sufS; bifunctional cysteine desulfurase/selenocysteinelyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SM39_1144 trxB; thioredoxin reductase, FAD/NAD(P)-binding K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SM39_0130 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SM39_0129 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SM39_2193 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SM39_3835 putative transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SM39_4397 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SM39_1007 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smar00460]
D SM39_0800 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SM39_1926 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_0366 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_1159 ansB; periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM39_2196 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SM39_0983 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SM39_4485 asnA; asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D SM39_3236 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:smar00470]
D SM39_2216 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_3904 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_0796 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_0077 ddlB; UDP-N-acetylmuramate: L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_3020 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SM39_3630 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SM39_4655 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SM39_0073 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM39_2047 putative mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SM39_1940 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D SM39_2393 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D SM39_4319 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SM39_3440 lysA; diaminopimelate decarboxylase, PLP-binding K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SM39_1308 putative proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D SM39_1311 putative pyridine nucleotide-disulphide oxidoreductase K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D SM39_1309 putative FAD-dependent oxidoreductase K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D SM39_1310 hypothetical protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D SM39_1306 putative lyase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D SM39_1305 aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D SM39_2217 dadA; D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:smar00480]
D SM39_1926 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_0366 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_2374 chaC; regulatory protein for cation transport K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D SM39_0672 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D SM39_0670 putative hydrolase K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D SM39_0671 putative hydrolase K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D SM39_2523 putative carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D SM39_0166 gshA; gamma-glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SM39_3619 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SM39_4833 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SM39_3221 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D SM39_1188 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SM39_0268 pepD; aminoacyl-histidine dipeptidase, peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SM39_1685 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_2572 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_0872 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_3891 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_3760 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_1066 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_4174 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SM39_1506 icdA; isocitrate dehydrogenase, specific for NADP+ K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SM39_1046 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SM39_2240 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM39_1613 btuE; putative glutathione peroxidase/vitamin B12 transport periplasmic protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SM39_1633 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SM39_4648 thioredoxin reductase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D SM39_4793 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SM39_3636 speC; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SM39_3599 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:smar00511]
D SM39_2664 lacZ; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SM39_1446 ebgA; cryptic beta-D-galactosidase, alpha subunit K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D SM39_1447 ebgC; cryptic beta-D-galactosidase, beta subunit K12112 ebgC; evolved beta-galactosidase subunit beta
D SM39_4819 putative chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_0650 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:smar00540]
D SM39_3376 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SM39_0081 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SM39_3378 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SM39_0510 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SM39_3375 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SM39_1167 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SM39_3820 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SM39_1471 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphatesynthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SM39_3821 kdsC; 3-deoxy-d-manno-octulosonate 8-phosphatephosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SM39_1173 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SM39_4545 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SM39_1353 lpxL; lauryl-acyl carrier protein (ACP)-dependent acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SM39_2548 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SM39_2245 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SM39_2381 putative aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SM39_3881 putative aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SM39_2809 lpxT; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D SM39_1668 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SM39_4369 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D SM39_0311 putative lipid A palmitoyl transferase precursor K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SM39_1619 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SM39_3882 lpxP; palmitoleoyl-acyl carrier protein-dependent acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SM39_0254 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SM39_3717 rfaE; fused heptose 7-phosphate kinase/heptose1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SM39_3351 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SM39_4557 waaD; ADP-L-Glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SM39_4555 waaC; lipopolysaccharide heptosyltransferase-I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SM39_4556 waaF; ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SM39_4549 waaQ; lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D SM39_2285 putative glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SM39_4548 glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SM39_4553 waaL; lipid A core: surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:smar00542]
D SM39_2356 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4339 wecA; undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:smar00541]
D SM39_2182 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1015 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1016 predicted subunit with GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1038 glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SM39_1037 galE; UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_4552 UDP-galactose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SM39_1042 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D SM39_2181 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SM39_2180 uge; UDP galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SM39_4334 rffH; glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM39_4335 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SM39_4332 rffA; lipopolysaccharide biosynthesis protein 1 K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D SM39_4333 rffC; lipopolysaccharide biosynthesis protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D SM39_1725 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SM39_1036 cpsG; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SM39_1035 mannose-1-phosphate guanyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SM39_1025 GDP-D-mannose dehydratase, NAD(P)-binding K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D SM39_1026 predicted NAD-dependent epimerase/dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D SM39_4470 glmU; fused N-acetyl glucosamine-1-phosphateuridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SM39_4337 rffE; UDP-N-acetyl-D-glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM39_4336 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:smar00550]
D SM39_3811 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM39_4241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM39_0076 murC; UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SM39_0073 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM39_0070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SM39_0796 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_0077 ddlB; UDP-N-acetylmuramate: L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_0071 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SM39_3383 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SM39_3722 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_1090 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_0072 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM39_0075 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SM39_3794 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SM39_4061 mrcA; fused penicillin-binding protein 1a: mureintransglycosylase/murein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM39_3575 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SM39_3396 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SM39_0617 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_1813 transpeptidase involved in peptidoglycan synthesis K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_0069 ftsI; transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_1814 transpeptidase involved in septal peptidoglycan synthesis K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_0614 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_2069 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_1072 dacC; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_0477 putative penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SM39_4763 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:smar00552]
D SM39_3722 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_1090 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_2356 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4339 wecA; undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:smar00543]
D SM39_1029 predicted UDP-glucose lipid carrier transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D SM39_2356 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4339 wecA; undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4328 rffM; probable UDP-N-acetyl-D-mannosaminuronic acidtransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SM39_4330 rffT; 4-alpha-l-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D SM39_3004 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D SM39_3003 hmsS; haemin storage system, HmsS protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D SM39_4567 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SM39_1024 predicted acyltransferase K16568 exoZ; exopolysaccharide production protein ExoZ
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smar00730]
D SM39_4217 thiC; thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SM39_3183 thiD; bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SM39_4219 thiF; thiamine biosynthesis adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D SM39_3228 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM39_0385 thiI; sulfurtransferase required for thiamine and 4-thiouridine biosynthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SM39_4222 thiH; thiamin biosynthesis ThiGH complex subunit K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D SM39_0382 dxs; 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SM39_4221 thiG; thiamin biosynthesis ThiGH complex subunit K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SM39_3184 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SM39_4218 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SM39_0379 thiL; thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SM39_4702 rsgA; probable GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SM39_0968 phoA; bacterial alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3714 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_1394 putative thiamin kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D SM39_0460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SM39_2621 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:smar00740]
D SM39_2103 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SM39_0376 ribD; fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SM39_4316 putative hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SM39_3715 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D SM39_0377 ribH; riboflavin synthase beta chain K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SM39_1654 ribC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SM39_0017 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SM39_3797 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4117 hypothetical protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4439 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4968 hpaC; 4-hydroxyphenylacetate 3-monooxygenase reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D SM39_4248 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D SM39_1852 putative flavin monooxygenase/reductase K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36]
D SM39_1193 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SM39_3184 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SM39_3703 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SM39_1503 nudJ; bifunctional thiamin pyrimidine pyrophosphatehydrolase/thiamin pyrophosphate hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D SM39_2930 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:smar00750]
D SM39_1682 pdxH; pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SM39_1684 pdxY; pyridoxal kinase 2/pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SM39_1999 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SM39_3535 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D SM39_2939 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D SM39_1160 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SM39_1096 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SM39_0039 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SM39_3264 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SM39_0004 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smar00760]
D SM39_3275 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SM39_3550 putative dehydrogenase K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D SM39_0698 nadA; quinolinate synthase, subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SM39_0093 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SM39_1186 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SM39_3690 xapA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM39_5001 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SM39_5005 nadR; bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SM39_0468 ushA; bifunctional UDP-sugarhydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D SM39_0141 surE; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SM39_0642 nagD; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SM39_0620 nadD; nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SM39_0108 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SM39_4215 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SM39_3249 putative glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SM39_0159 putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SM39_2197 pncA; nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SM39_1480 npdA; deacetylase of acetyl-CoA synthetase, NAD-dependent K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SM39_3283 ppnK; probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SM39_4650 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D SM39_2012 pntA; pyridine nucleotide transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SM39_2011 pntB; pyridine nucleotide transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SM39_1773 putative oxidoreductase, [2Fe-2S]-binding subunit K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D SM39_1933 putative oxidoreductase, [2Fe-2S]-binding subunit K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D SM39_1774 putative oxidoreductase, molybdopterin-binding and cytochrome C subunit K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D SM39_1932 putative oxidoreductase, molybdopterin-binding subunit K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D SM39_1770 putative monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114]
D SM39_1771 hypothetical protein K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D SM39_1769 putative alpha/beta hydrolase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D SM39_1767 putative isochorismatase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D SM39_1768 maiA; maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D SM39_2575 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3540 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_1975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SM39_3762 putative succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:smar00770]
D SM39_4201 ilvG; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0048 ilvB; acetolactate synthase I, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0062 ilvI; acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3548 putative thiamine pyrophosphate enzyme K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_3045 budB; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SM39_0047 ilvN; acetolactate synthase I, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_0063 ilvH; acetolactate synthase III, thiamin-dependent, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SM39_4200 ilvM; acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SM39_4193 ilvC; ketol-acid reductoisomerase, NAD(P)-binding K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SM39_4198 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SM39_3589 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SM39_0389 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SM39_3590 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SM39_4239 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SM39_4538 dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SM39_0108 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SM39_4543 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SM39_0088 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SM39_3263 acpS; holo-[acyl-carrier-protein] synthase 1 K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SM39_0368 acpH; acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D SM39_4199 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM39_1987 putative L-N-carbamoylase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SM39_3591 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:smar00780]
D SM39_0731 bioC; biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D SM39_2963 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SM39_1203 putative 3-oxoacyl-[acyl-carrier-protein]synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_1378 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_3894 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_2504 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4956 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4376 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1376 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_3328 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_3377 fabZ; (3R)-hydroxymyristoyl acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_1831 putative thioesterase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_4082 bioH; carboxylesterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D SM39_0730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SM39_2743 putative aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SM39_0728 bioA; 7,8-diaminopelargonic acid synthase, PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SM39_0732 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SM39_1737 putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SM39_0729 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SM39_4240 birA; bifunctional protein synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SM39_3436 putative molybdopterin-containing oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:smar00785]
D SM39_0612 lipB; lipoyl-protein ligase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SM39_0611 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SM39_1623 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3606 aceE; pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SM39_3605 aceF; pyruvate dehydrogenase, dihydrolipoyl transacetylase component E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SM39_0682 sucA; 2-oxoglutarate decarboxylase, thiamin-requiring K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SM39_0683 sucB; dihydrolipoyltranssuccinase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SM39_3511 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SM39_3513 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SM39_3512 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:smar00790]
D SM39_0994 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SM39_2059 hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D SM39_0968 phoA; bacterial alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3714 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_2254 nudB; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D SM39_3723 folB; bifunctional dihydroneopterinaldolase/dihydroneopterin triphosphate 2'-epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SM39_3584 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SM39_4768 folP; 7,8-dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SM39_pSMC1_36 sulI1; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D SM39_pSMC1_47 sulI2; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D SM39_0034 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SM39_2934 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SM39_2103 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SM39_4031 pabA; aminodeoxychorismate synthase, subunit II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SM39_2286 pabB; para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SM39_1379 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SM39_2923 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7]
D SM39_2018 putative short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D SM39_0121 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SM39_0118 radical SAM superfamily protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SM39_0409 queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SM39_3402 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SM39_3661 putative NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SM39_0740 moaA; molybdopterin biosynthesis, protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SM39_0742 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SM39_0744 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SM39_0008 mog; predicted molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SM39_0741 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SM39_0981 moeA; molybdopterin biosynthesis, protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SM39_3612 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D SM39_4500 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:smar00670]
D SM39_0034 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SM39_2018 putative short chain dehydrogenase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3]
D SM39_0514 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SM39_3236 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SM39_3137 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SM39_4208 purH; fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM39_3962 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SM39_3513 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SM39_3945 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SM39_3424 thyA; thymidylate synthetase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SM39_2186 purU; formyltetrahydrofolate hydrolase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SM39_4639 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SM39_3520 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:smar00860]
D SM39_1297 putative aminotransferase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SM39_3036 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SM39_1466 hemA; glutamyl tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SM39_0096 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SM39_4252 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SM39_4323 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SM39_4324 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SM39_4214 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SM39_3076 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SM39_4510 hemN; coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SM39_4242 hemG; protoporphyrin oxidase, flavoprotein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D SM39_0464 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SM39_4325 hemX; predicted uroporphyrinogen III methylase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SM39_4049 fused siroheme synthase1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SM39_0128 cysG; fused siroheme synthase1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D SM39_1886 fused siroheme synthase1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SM39_0392 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SM39_2111 btuR; cob(I) alamin adenosyltransferase/cobinamideATP-dependent adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SM39_3997 bfr; bacterioferritin, iron storage and detoxification protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smar00130]
D SM39_3917 ubiC; chorismate pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D SM39_3916 ubiA; p-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SM39_4249 ubiD; 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D SM39_2930 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SM39_3514 visC; putative monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D SM39_2867 ubiG; bifunctional 3-demethylubiquinone-93-methyltransferase/2-octaprenyl-6-hydroxy phenolmethylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SM39_3515 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D SM39_4259 ubiE; bifunctional2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SM39_0639 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SM39_2651 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SM39_4672 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SM39_2881 menD; bifunctional 2-oxoglutarate decarboxylase/SHCHCsynthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D SM39_2880 putative alpha/beta hydrolase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D SM39_2878 menC; O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D SM39_2877 menE; 2-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D SM39_2879 menB; dihydroxynaphthoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D SM39_1639 putative thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SM39_4628 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SM39_0298 putative oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SM39_1286 wrbA; flavoprotein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SM39_0595 putative flavodoxin K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smar00900]
D SM39_0382 dxs; 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SM39_3384 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SM39_0138 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SM39_1464 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SM39_0139 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphatesynthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SM39_3215 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphatesynthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SM39_0021 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_2930 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SM39_0383 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SM39_4754 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SM39_3383 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:smar00907]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SM39_2914 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2915 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_3094 tktB; transketolase 2, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2099 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_2100 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SM39_3546 tktA; transketolase 1, thiamin-binding K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:smar00523]
D SM39_4334 rffH; glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM39_4335 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:smar01053]
D SM39_2651 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SM39_4672 entC; isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SM39_4674 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SM39_2650 isochorismatase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D SM39_2652 pswP; putative 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D SM39_4673 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SM39_4660 putative enterobactin synthetase, containing condensation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D SM39_4670 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics
D SM39_4335 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:smar00946]
D SM39_0800 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:smar00332]
D SM39_0272 proB; gamma-glutamate kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SM39_0273 proA; gamma-glutamylphosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:smar00261]
D SM39_4669 MbtH-like protein K05375 mbtH; MbtH protein
D SM39_1906 putative siderophore biosynthesis protein K05375 mbtH; MbtH protein
D SM39_0130 cysN; sulfate adenylyltransferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D SM39_0129 cysD; sulfate adenylyltransferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SM39_3933 lysC; aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SM39_0002 thrA; fused aspartokinase I and homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SM39_4638 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D SM39_4105 asd; aspartate-semialdehyde dehydrogenase, NAD(P)-binding K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SM39_1686 putative lyase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_3112 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_1950 putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SM39_0026 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smar00521]
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SM39_0656 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SM39_3231 suhB; inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM39_1959 putative monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SM39_4126 iolG; myo-inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D SM39_4334 rffH; glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM39_4335 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SM39_3018 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:smar00525]
D SM39_4334 rffH; glucose-1-phosphate thymidylyltransferase 1 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SM39_4335 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:smar00401]
D SM39_0180 tyrA; fused chorismate mutase T/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SM39_2136 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SM39_2137 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SM39_1375 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM39_3894 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_2504 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4956 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4376 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1376 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_3328 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SM39_1377 acpP; acyl carrier protein ACP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:smar00999]
D SM39_3569 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SM39_3956 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SM39_0800 bglX; beta-D-glucoside glucohydrolase, periplasmic K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:smar00997]
D SM39_0023 pvcA; pyoverdine biosynthesis protein K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D SM39_0024 pvcB; pyoverdine biosynthesis protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
D SM39_3651 putative L-lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D SM39_4454 iucD; putative L-lysine 6-monooxygenase K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:smar00362]
D SM39_2609 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D SM39_2605 3-oxoadipate CoA-transferase, subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D SM39_2606 3-oxoadipate CoA-transferase, subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2607 paaJ; predicted beta-ketoadipyl CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D SM39_2611 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D SM39_2612 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D SM39_2608 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D SM39_0896 putative 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D SM39_1936 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D SM39_2826 mhbM; 3-hydroxybenzoate-6-hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4921 3-hydroxyacyl-CoA dehydrogenase, NAD-binding subunit K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_1299 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_2561 paaH; 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:smar00627]
D SM39_1266 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SM39_2930 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:smar00364]
D SM39_4264 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:smar00625]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:smar00361]
D SM39_4264 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:smar00623]
D SM39_0589 putative alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
D SM39_4264 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:smar00622]
D SM39_0589 putative alcohol dehydrogenase K00055 E1.1.1.90; aryl-alcohol dehydrogenase [EC:1.1.1.90]
C 00633 Nitrotoluene degradation [PATH:smar00633]
D SM39_1666 nemA; N-ethylmaleimide reductase, FMN-linked K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D SM39_4247 fadA; fatty oxidation complex beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SM39_2976 fadI; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:smar00643]
D SM39_0303 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D SM39_2827 mhbI; putative maleylpyruvate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
C 00791 Atrazine degradation [PATH:smar00791]
D SM39_0851 putative amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D SM39_0852 putative amidolyase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation [PATH:smar00930]
D SM39_0772 DJ-1/PfpI-family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SM39_2559 paaF; enoyl-CoA hydratase-isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D SM39_4246 fadB; fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D SM39_2975 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:smar00626]
D SM39_1838 adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SM39_0991 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SM39_2176 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D SM39_2611 protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D SM39_2612 protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smar03020]
D SM39_4230 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM39_4229 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM39_3970 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM39_4526 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smar03010]
D SM39_1163 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SM39_3388 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SM39_3989 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SM39_3971 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SM39_3978 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SM39_4727 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SM39_4002 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SM39_3981 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SM39_3805 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SM39_3996 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SM39_3972 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SM39_4003 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SM39_3973 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SM39_3982 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SM39_4776 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SM39_0171 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SM39_3986 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SM39_4729 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SM39_3991 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SM39_0015 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SM39_3726 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SM39_4233 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SM39_3992 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SM39_3995 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SM39_3994 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SM39_3983 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SM39_3980 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SM39_4231 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SM39_4730 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SM39_4232 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SM39_4234 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SM39_3806 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SM39_3985 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SM39_3976 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SM39_3988 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SM39_3969 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SM39_3979 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SM39_0174 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SM39_1606 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SM39_4755 rpmU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SM39_3990 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SM39_3993 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SM39_3984 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SM39_2822 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SM39_4756 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SM39_4540 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SM39_3987 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SM39_3977 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SM39_0447 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SM39_4634 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SM39_1372 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SM39_4541 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM39_4449 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SM39_1605 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SM39_0446 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SM39_3974 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SM39_rRNA17 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA20 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA22 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smar00970]
D SM39_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA06 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA78 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA63 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA45 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA03 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA73 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA39 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA40 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA41 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA07 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA08 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA62 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA26 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SM39_tRNA11 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA13 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA52 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA76 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA60 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA69 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA66 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA56 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA81 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA80 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA82 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA72 tRNA-His K14226 tRNA-His; tRNA His
D SM39_tRNA05 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA64 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA83 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA85 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA71 tRNA-Ieu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA87 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA86 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA88 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA24 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA22 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA51 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA12 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA16 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA53 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA84 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA54 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA55 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA58 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SM39_tRNA31 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA57 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA79 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA42 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA70 tRNA-Prp K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA74 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA44 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA23 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA01 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA65 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA43 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA68 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA59 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA61 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SM39_tRNA35 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA67 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA36 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA18 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA50 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA49 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA48 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA32 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA33 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA75 tRNA-Sel K14238 tRNA-Sec; tRNA Sec
D SM39_3036 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SM39_3500 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SM39_0647 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SM39_0162 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM39_2255 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM39_1185 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM39_4418 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM39_4417 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM39_1603 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM39_1150 serS; seryl-tRNA synthetase, also chargesselenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM39_3835 putative transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SM39_4397 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SM39_0512 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM39_1007 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM39_3962 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SM39_4831 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM39_0623 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM39_0018 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM39_3473 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM39_2268 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM39_3357 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM39_3214 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM39_1607 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM39_1608 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM39_1683 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM39_4050 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM39_0844 probable tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smar03060]
D SM39_3975 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D SM39_4236 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D SM39_4770 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D SM39_0372 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D SM39_0373 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D SM39_0371 SecYEG protein translocase auxiliary subunit K03210 yajC; preprotein translocase subunit YajC
D SM39_4452 oxaA; putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM39_0084 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM39_4565 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D SM39_0083 secM; regulator of secA translation K13301 secM; secretion monitor
D SM39_0170 ffh; signal recognition particle component with 4.5S RNA ffs K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM39_4287 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM39_4256 tatA; TatABCE protein translocation system subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM39_4255 tatB; TatABCE protein translocation system subunit K03117 tatB; sec-independent protein translocase protein TatB
D SM39_4254 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D SM39_0610 tatE; TatABCE protein translocation system subunit K03425 tatE; sec-independent protein translocase protein TatE
D SM39_3268 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM39_0019 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smar04122]
D SM39_3228 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM39_0868 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SM39_4295 tusA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SM39_4004 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SM39_4005 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SM39_4006 tusD; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SM39_1267 tusE; sulfur transfer protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SM39_1502 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SM39_0744 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SM39_0740 moaA; molybdopterin biosynthesis, protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SM39_0743 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D SM39_0980 moeB; molybdopterin synthase sulfurylase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SM39_0742 moaC; molybdopterin biosynthesis, protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SM39_0008 mog; predicted molybdochelatase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SM39_0741 moaB; molybdopterin biosynthesis, protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SM39_0385 thiI; sulfurtransferase required for thiamine and 4-thiouridine biosynthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SM39_4220 thiS; sulphur carrier protein K03154 thiS; sulfur carrier protein
D SM39_4219 thiF; thiamine biosynthesis adenylyltransferase K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:smar03018]
D SM39_3428 nudH; nucleoside hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SM39_1368 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SM39_4343 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_4777 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SM39_0751 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SM39_4717 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM39_4779 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM39_4308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SM39_4340 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_0011 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D SM39_4686 groEL; chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM39_4710 hfq; HF-I, host factor for RNA phage Q beta replication K03666 hfq; host factor-I protein
D SM39_3151 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SM39_1992 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SM39_3583 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smar03030]
D SM39_0557 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_1414 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_2774 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_0194 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM39_3373 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM39_0456 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM39_1382 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM39_0621 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM39_4987 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SM39_4832 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SM39_4445 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM39_0545 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_1233 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_3905 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_3727 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_0193 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SM39_3374 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:smar03410]
D SM39_1700 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SM39_3281 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SM39_3633 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SM39_4542 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SM39_0676 nei; endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SM39_3157 putative adaptative response regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SM39_4421 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SM39_3729 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SM39_2188 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SM39_2793 nfo; endonuclease IV with intrinsic 3'-5' exonuclease activity K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_3476 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:smar03420]
D SM39_1474 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SM39_3896 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D SM39_0736 uvrB; excinuclease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D SM39_1319 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SM39_4315 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:smar03430]
D SM39_0146 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D SM39_4708 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SM39_3429 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D SM39_4315 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM39_2775 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SM39_3202 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SM39_0384 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SM39_0533 DNA exonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SM39_1409 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SM39_3476 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_3373 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM39_4445 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM39_0456 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM39_0621 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM39_1382 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM39_0194 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM39_0557 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_1414 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_2774 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_4832 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SM39_4987 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM39_4053 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_0227 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:smar03440]
D SM39_3476 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_4444 recF; gap repair protein K03629 recF; DNA replication and repair protein RecF
D SM39_3265 recO; gap repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D SM39_0458 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SM39_0160 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D SM39_pSMC2_72 DNA recombinase A K03553 recA; recombination protein RecA
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_2251 ruvA; component of RuvABC resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D SM39_2250 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SM39_2252 ruvC; component of RuvABC resolvasome, endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SM39_4523 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SM39_3417 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SM39_3419 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SM39_3416 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SM39_3373 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM39_4445 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM39_0456 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM39_0621 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM39_1382 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM39_0194 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM39_0557 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_1414 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_2774 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_4832 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SM39_4987 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SM39_4633 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SM39_4728 priB; primosomal protein N K02686 priB; primosomal replication protein N
D SM39_0453 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:smar03250]
D SM39_4037 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smar02010]
D SM39_3069 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SM39_4616 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SM39_3068 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SM39_3067 cysW; sulphate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SM39_3066 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SM39_1878 nitrate-binding proteint K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SM39_1879 putative nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D SM39_1880 putative nitrate ABC transporter K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SM39_4021 tauA; taurine transporter subunit K15551 tauA; taurine transport system substrate-binding protein
D SM39_4019 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D SM39_4020 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SM39_1192 ssuA; putative aliphatic sulfonates ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SM39_1190 ssuC; putative aliphatic sulfonates ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SM39_1189 ssuB; alkanesulfonate transporter subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SM39_2624 ABC transporter, substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D SM39_2623 ABC transporter, permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D SM39_2622 ABC transporter, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D SM39_0807 putative exported protein K02020 modA; molybdate transport system substrate-binding protein
D SM39_0721 modA; molybdate transporter subunit K02020 modA; molybdate transport system substrate-binding protein
D SM39_2736 putative exported protein K02020 modA; molybdate transport system substrate-binding protein
D SM39_0722 modB; molybdate transporter subunit K02018 modB; molybdate transport system permease protein
D SM39_0723 modC; molybdate transporter subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SM39_0713 modF; fused molybdate transporter subunits of ABC superfamily: ATP-binding components K05776 modF; molybdate transport system ATP-binding protein
D SM39_3544 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_0757 putative ferric ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_1967 fbpA; iron(III) ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_3543 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_0756 putative ferric ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_1968 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_3542 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_0755 afcU; predicted ferric transporter subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_1969 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_0051 tbpA; thiamin transporter subunit K02064 thiB; thiamine transport system substrate-binding protein
D SM39_0050 thiP; fused thiamin transporter subunits of ABC superfamily: membrane components K02063 thiP; thiamine transport system permease protein
D SM39_0049 thiQ; thiamin transporter subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SM39_1481 potD; polyamine transporter subunit K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SM39_1485 potC; polyamine transporter subunit K11070 potC; spermidine/putrescine transport system permease protein
D SM39_1486 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D SM39_1487 potA; polyamine transporter subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SM39_1105 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D SM39_1108 potI; putrescine ABC transporter, permease protein K11074 potI; putrescine transport system permease protein
D SM39_1107 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D SM39_1106 potG; putrescine transporter subunit: ATP-binding component of ABC superfamily K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SM39_1579 phnS; 2-aminoethylphosphonate ABC transporter, substrate-binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D SM39_1576 phnV; putative 2-aminoethylphosphonate ABC transporter, permease protein K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D SM39_1577 phnU; putative 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D SM39_1578 phnT; 2-aminoethylphosphonate ABC transporter, ATP-binding protein K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D SM39_3336 proX; glycine betaine transporter subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SM39_3335 proW; glycine betaine transporter subunit K02001 proW; glycine betaine/proline transport system permease protein
D SM39_3334 proV; glycine betaine transporter subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SM39_0880 predicted transporter subunit: periplasmic-binding component of ABC superfamily K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM39_1743 putative glycine betaine/carnitine/choline ABC transporter, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM39_0881 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_0883 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_1742 putative glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_1744 putative glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_0882 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM39_1741 putative glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM39_3926 malE; maltose transporter subunit K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D SM39_3927 malF; maltose transport system permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D SM39_3928 malG; maltose transport system permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D SM39_3924 malK; maltose/maltodextrin import ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM39_3814 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SM39_3815 mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SM39_3816 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SM39_3813 putative anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D SM39_3817 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SM39_2763 putative ribose ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SM39_4494 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D SM39_2761 putative ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D SM39_4493 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D SM39_2762 putative ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SM39_4492 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SM39_4491 rbsD; predicted cytoplasmic sugar-binding protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D SM39_0997 mglB; methyl-galactoside transporter subunit K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SM39_0999 mglC; methyl-galactoside transporter subunit K10541 mglC; methyl-galactoside transport system permease protein
D SM39_0998 mglA; fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D SM39_2097 sugar ABC transporter, substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D SM39_2094 sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D SM39_2095 sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D SM39_2162 putative sugar ABC transporter, substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein
D SM39_2161 putative sugar ABC transporter, permease protein K17206 xltB; putative xylitol transport system permease protein
D SM39_2160 putative sugar ABC transporter, ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D SM39_1431 ABC transporter, substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D SM39_1434 ABC transporter, substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D SM39_1433 ABC transporter, permease protein K17214 K17214; inositol transport system permease protein
D SM39_1432 ABC transporter, ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D SM39_4274 ugpB; glycerol-3-phosphate transporter subunit K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SM39_4273 ugpA; sn-glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SM39_4272 ugpE; sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SM39_4271 ugpC; sn-glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SM39_4468 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D SM39_0360 putative phosphate binding ABC-transport protein K02040 pstS; phosphate transport system substrate-binding protein
D SM39_4467 pstC; phosphate transporter subunit K02037 pstC; phosphate transport system permease protein
D SM39_3150 putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D SM39_4466 pstA; phosphate transporter subunit K02038 pstA; phosphate transport system permease protein
D SM39_3149 putative phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D SM39_4465 pstB; phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM39_3148 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM39_0846 ABC transporter, substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SM39_0847 ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D SM39_0848 ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D SM39_0845 ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SM39_0797 putative extracellular solute-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D SM39_2926 hisM; histidine ABC transporter, permease protein K10015 hisM; histidine transport system permease protein
D SM39_2927 hisQ; histidine ABC transporter, permease protein K10016 hisQ; histidine transport system permease protein
D SM39_2925 hisP; histidine ABC transporter, ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_2928 hisJ; histidine ABC transporter, substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D SM39_2767 lysine/arginine/ornithine transporter subunit K10014 hisJ; histidine transport system substrate-binding protein
D SM39_0920 glnH; glutamine transporter subunit K10036 glnH; glutamine transport system substrate-binding protein
D SM39_0919 glnP; glutamine transporter subunit K10037 glnP; glutamine transport system permease protein
D SM39_0918 glnQ; glutamine transporter subunit K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_1113 artJ; arginine transporter subunit K09996 artJ; arginine transport system substrate-binding protein
D SM39_1116 artI; arginine transporter subunit K09997 artI; arginine transport system substrate-binding protein
D SM39_1114 artM; arginine transporter subunit K09998 artM; arginine transport system permease protein
D SM39_1115 artQ; arginine transporter subunit K09999 artQ; arginine transport system permease protein
D SM39_1117 artP; arginine transporter subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_0632 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SM39_0630 gltK; glutamate and aspartate transporter subunit K10002 gltK; glutamate/aspartate transport system permease protein
D SM39_0631 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D SM39_0629 gltL; glutamate and aspartate transporter subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SM39_2392 fliY; cystine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM39_2391 cystine ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SM39_2390 cystine ABC-transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_4280 livK; leucine/isoleucine/valine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_1985 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_2730 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_4279 livH1; leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_1981 ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SM39_2729 leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_4278 livM1; leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_1982 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SM39_2728 leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_4277 livG1; leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_1983 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_2727 leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_4276 livF1; leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_1984 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_2726 leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_1440 putative amino acid ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0836 putative ABC transporter, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_3354 metQ; D-methionine ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0781 nlpA; cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0837 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D SM39_3353 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D SM39_0838 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM39_3352 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM39_0854 putative ABC transporter, substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SM39_0855 ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D SM39_0856 ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D SM39_0857 ABC transporter, ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D SM39_0858 ABC transporter, ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D SM39_0734 putative ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D SM39_2044 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_1964 putative oligopeptide transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2173 oppA; oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2174 oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2172 oppB; oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D SM39_2171 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D SM39_2170 oppD; oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D SM39_2169 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM39_4363 dppA; dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_3044 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_0296 dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_4362 dppB; dipeptide transporter K12369 dppB; dipeptide transport system permease protein
D SM39_4361 dppC; dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D SM39_4360 dppD; dipeptide ABC transporter, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D SM39_4359 dppF; dipeptide ABC transporter, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D SM39_2060 sapA; predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D SM39_2061 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D SM39_2062 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D SM39_2063 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D SM39_2064 sapF; predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D SM39_0985 gsiB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein
D SM39_0986 gsiC; ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D SM39_0987 gsiD; predicted peptide transporter subunit: membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein
D SM39_0984 gsiA; ABC transporter, ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D SM39_2812 ABC transporter, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D SM39_2813 ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D SM39_2816 ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D SM39_3038 fepB; ferric siderophore ABC transporter, substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D SM39_3039 fepD; ferric siderophore ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D SM39_3040 fepG; ferric siderophore ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D SM39_3041 fepC; ferric siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SM39_3572 fhuD; ferrichrome ABC transporter, substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D SM39_3571 fhuB; ferrichrome ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D SM39_3573 fhuC; ferrichrome ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SM39_0101 btuF; vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily K06858 btuF; vitamin B12 transport system substrate-binding protein
D SM39_1612 btuC; vitamin B12 transport system permease K06073 btuC; vitamin B12 transport system permease protein
D SM39_1614 btuD; vitamin B12 ABC transporter, ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D SM39_2247 znuA; zinc transporter subunit: periplasmic-binding component of ABC superfamily K09815 znuA; zinc transport system substrate-binding protein
D SM39_2249 znuB; high-affinity zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D SM39_2248 znuC; zinc transporter subunit: ATP-binding component of ABC superfamily K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SM39_1592 chelated iron ABC transporter, substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D SM39_1590 chelated iron ABC transporter, permease protein K11605 sitC; manganese/iron transport system permease protein
D SM39_1589 chelated iron ABC transporter, permease protein K11606 sitD; manganese/iron transport system permease protein
D SM39_1591 chelated iron ABC transporter, ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D SM39_1039 wzm; O-antigen ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D SM39_1040 wzt; O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SM39_1476 lolC; lipoprotein-releasing ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SM39_1478 lolE; lipoprotein-releasing ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SM39_1477 lolD; lipoprotein-releasing ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SM39_2985 ccmD; cytochrome C biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D SM39_2986 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D SM39_2987 ccmB; cytochrome C biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D SM39_2988 ccmA; cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SM39_2750 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D SM39_4834 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D SM39_2751 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D SM39_4835 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D SM39_3824 lptB; ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SM39_4285 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SM39_4286 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SM39_1166 msbA; fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SM39_0414 smdA; multidrug efflux pump SmdA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM39_0415 smdB; multidrug efflux pump SmdB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM39_1756 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_1782 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_3462 ABC transporter, ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SM39_0343 hasD; heme acquisition ABC transporter, ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_1032 type I secretion system ATPase LipB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_1142 cydC; ABC transporter, ATP-binding/permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SM39_1143 cydD; ABC transporter, ATP-binding/permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SM39_1135 macB; macrolide-specific ABC transporter, ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SM39_1330 etsB; ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SM39_3446 ABC transporter, ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:smar02060]
D SM39_3060 ptsI; PEP-protein phosphotransferase of PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SM39_3059 ptsH; PTS system phosphohistidinoprotein-hexosephosphotransferase subunit Hpr K02784 ptsH; phosphocarrier protein HPr
D SM39_3061 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SM39_1384 ptsG; fused glucose-specific PTS enzymes: IIB component/IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SM39_0646 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SM39_1125 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1718 malX; maltose-specific PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_3295 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3671 scrA; sucrose-specific PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3259 PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_4375 bglF; beta-glucoside-specific PTS system, EIIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SM39_4886 ascF; fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D SM39_1484 PTS system, EIIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SM39_4816 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SM39_4414 mtlA; fused mannitol-specific PTS enzymes: IIAcomponents/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SM39_4039 putative lactose/cellobiose-specific PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SM39_0153 chbB; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SM39_0154 chbC; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS K02761 celB; cellobiose PTS system EIIC component
D SM39_2291 manX; fused mannose-specific PTS enzymes: IIAcomponent/IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM39_2292 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D SM39_2293 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D SM39_3447 agaF; putative N-acetylgalactosamine-specific PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM39_3450 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SM39_3449 agaW; putative N-acetylgalactosamine-specific PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SM39_3448 agaE; putative N-acetylgalactosamine-specific PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SM39_3177 srlB; glucitol/sorbitol-specific enzyme IIA component of PTS K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SM39_3176 srlE; glucitol/sorbitol-specific enzyme IIB component of PTS K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SM39_3175 srlA; glucitol/sorbitol-specific enzyme IIC component of PTS K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SM39_2918 PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_4091 ulaC; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_2917 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_4092 ulaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_2916 putative PTS system, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SM39_4093 ulaA; L-ascorbate-specific enzyme IIC component of PTS K03475 ulaA; ascorbate PTS system EIIC component
D SM39_2796 fruB; bifunctional PTS system fructose-specifictransporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SM39_2794 fruA; fused fructose-specific PTS enzymes: IIB component/IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM39_2795 fruK; fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SM39_3427 ptsP; fused phosphoenolpyruvate-proteinphosphotransferase PtsP/GAF domain K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SM39_3829 npr; phosphohistidinoprotein-hexosephosphotransferase component of N-regulated PTS system K08485 ptsO; phosphocarrier protein NPr
D SM39_3827 ptsN; sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:smar03070]
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_0426 type II secretion pathway related protein K02453 gspD; general secretion pathway protein D
D SM39_2599 putative protein secretion protein K02465 gspS; general secretion pathway protein S
D SM39_0437 type II secretion pathway related protein K02465 gspS; general secretion pathway protein S
D SM39_0425 type II secretion pathway related protein K02452 gspC; general secretion pathway protein C
D SM39_0428 type II secretion pathway related protein K02455 gspF; general secretion pathway protein F
D SM39_0429 type II secretion pathway related protein K02456 gspG; general secretion pathway protein G
D SM39_0430 type II secretion pathway related protein K02457 gspH; general secretion pathway protein H
D SM39_0431 type II secretion pathway related protein K02458 gspI; general secretion pathway protein I
D SM39_0432 type II secretion pathway related protein K02459 gspJ; general secretion pathway protein J
D SM39_0433 type II secretion pathway related protein K02460 gspK; general secretion pathway protein K
D SM39_0434 type II secretion pathway related protein K02461 gspL; general secretion pathway protein L
D SM39_0435 type II secretion pathway related protein K02462 gspM; general secretion pathway protein M
D SM39_0427 type II secretion pathway related protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SM39_0372 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D SM39_0373 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D SM39_4236 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D SM39_4770 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D SM39_3975 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D SM39_0371 SecYEG protein translocase auxiliary subunit K03210 yajC; preprotein translocase subunit YajC
D SM39_4452 oxaA; putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM39_0084 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM39_0083 secM; regulator of secA translation K13301 secM; secretion monitor
D SM39_4287 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM39_4565 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D SM39_0170 ffh; signal recognition particle component with 4.5S RNA ffs K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM39_4256 tatA; TatABCE protein translocation system subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM39_4255 tatB; TatABCE protein translocation system subunit K03117 tatB; sec-independent protein translocase protein TatB
D SM39_4254 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D SM39_0610 tatE; TatABCE protein translocation system subunit K03425 tatE; sec-independent protein translocase protein TatE
D SM39_3935 shlB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D SM39_3936 shlA; hemolysin K11016 shlA; hemolysin
D SM39_2462 type VI secretion system, effector protein VgrG-like K11904 vgrG; type VI secretion system secreted protein VgrG
D SM39_2495 type VI secretion system, effector protein VgrG-like K11904 vgrG; type VI secretion system secreted protein VgrG
D SM39_2481 type VI secretion system, effector protein Hcp-like K11903 hcp; type VI secretion system secreted protein Hcp
D SM39_2471 type VI secretion system-associated protein, SciN-like K11906 vasD; type VI secretion system protein VasD
D SM39_2474 type VI secretion system-associated protein, IcmF-like K11891 impL; type VI secretion system protein ImpL
D SM39_2473 type VI secretion system-associated protein K11892 impK; type VI secretion system protein ImpK
D SM39_2493 type VI secretion system ATPase, ClpV1-like K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smar02020]
D SM39_0359 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SM39_0358 phoB; transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SM39_0968 phoA; bacterial alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3714 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_4468 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D SM39_0360 putative phosphate binding ABC-transport protein K02040 pstS; phosphate transport system substrate-binding protein
D SM39_1492 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SM39_1493 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SM39_3797 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4117 hypothetical protein K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4439 putative acid phosphatase K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SM39_4070 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SM39_4071 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SM39_2860 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D SM39_1184 ompF; outer membrane pore protein N, non-specific K09476 ompF; outer membrane pore protein F
D SM39_4571 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SM39_4572 cpxR; two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SM39_3779 putative exported protein K25864 mzrA; modulator protein MzrA
D SM39_2020 rstB; two-component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SM39_2019 rstA; two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D SM39_0104 degP; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM39_3481 creC; two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SM39_3482 creB; two-component system response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SM39_3166 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SM39_3167 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SM39_3162 mdtA; multidrug efflux pump K07799 mdtA; membrane fusion protein, multidrug efflux system
D SM39_3163 mdtB; multidrug efflux pump K07788 mdtB; multidrug efflux pump
D SM39_3164 mdtC; multidrug efflux pump K07789 mdtC; multidrug efflux pump
D SM39_3165 mdtD; multidrug efflux system protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_3100 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump
D SM39_4761 pmrB; two-component system sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SM39_4762 pmrA; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D SM39_1615 arnB; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulosediphosphate) aminotransferase, PLP-dependent K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SM39_0277 putative two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0941 two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0276 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_0940 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_3587 qseC; two-component system sensor kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SM39_3588 qseB; two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SM39_2456 flhD; DNA-binding transcriptional dual regulator with FlhC K02403 flhD; flagellar transcriptional activator FlhD
D SM39_2455 flhC; DNA-binding transcriptional dual regulator with FlhD K02402 flhC; flagellar transcriptional activator FlhC
D SM39_2396 fliC; flagellin K02406 fliC; flagellin
D SM39_2395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SM39_2454 motA; chemotaxis protein MotA, motility protein A K02556 motA; chemotaxis protein MotA
D SM39_0660 kdpD; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SM39_0659 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SM39_0663 kdpA; potassium translocating ATPase, subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D SM39_0662 kdpB; potassium translocating ATPase, subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D SM39_0661 kdpC; potassium translocating ATPase, subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D SM39_0664 kdpF; potassium ion accessory transporter subunit K01545 kdpF; potassium-transporting ATPase KdpF subunit
D SM39_2798 trimethylamine N-oxide reductase I, cytochrome C-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D SM39_3796 arcB; hybrid sensory histidine kinase in two-component regulatory system with ArcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SM39_5023 arcA; DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SM39_2942 tctE; two-component system sensor kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SM39_2943 tctD; two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D SM39_2947 tctA; tricarboxylic transport protein K07793 tctA; putative tricarboxylic transport membrane protein
D SM39_2946 tctB; tricarboxylic transport protein K07794 tctB; putative tricarboxylic transport membrane protein
D SM39_2945 tctC; tricarboxylic transport protein K07795 tctC; putative tricarboxylic transport membrane protein
D SM39_4446 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D SM39_4667 fepA; iron-enterobactin outer membrane transporter K19611 fepA; ferric enterobactin receptor
D SM39_3332 two-component system sensor kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D SM39_3333 two-component response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D SM39_2663 citB; two-component response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D SM39_2662 citC; citrate lyase synthetase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D SM39_2661 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D SM39_2660 citE; citrate lyase, citryl-ACP lyase subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SM39_2659 citF; citrate lyase, citrate-ACP transferase subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D SM39_2658 citX; Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D SM39_2657 citG; triphosphoribosyl-dephospho-CoA transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D SM39_2656 citT; citrate: succinate antiporter K09477 citT; citrate:succinate antiporter
D SM39_1429 ducS; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SM39_1428 ducR; DNA-binding response regulator in two-component regulatory system with DcuS K07703 dcuR; two-component system, CitB family, response regulator DcuR
D SM39_1322 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SM39_1001 sfcA; malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SM39_1552 maeN; putative sodium-dependent malate transporter K11616 maeN; malate:Na+ symporter
D SM39_2361 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SM39_2362 narL; transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SM39_3097 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SM39_3098 narP; DNA-binding response regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D SM39_2346 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2345 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2343 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2344 narJ; respiratory nitrate reductase 1 delta chain K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SM39_4698 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SM39_4697 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SM39_4696 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D SM39_4695 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D SM39_4366 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D SM39_4367 uhpB; two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SM39_4368 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D SM39_0760 two-component response regulator K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SM39_0761 putative N-acetyltransferase K20264 fusR; two-component system, NarL family, response regulator FusR
D SM39_3355 rcsF; regulator gene of exopolysaccharide synthesis K06080 rcsF; RcsF protein
D SM39_2865 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SM39_2863 rcsD; phosphotransfer intermediate protein intwo-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SM39_3102 LuxR-family transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_2534 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_2864 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SM39_1272 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SM39_0105 barA; hybrid sensory histidine kinase in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SM39_1318 uvrY; two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SM39_0163 csrA; pleiotropic regulatory protein for carbon source metabolism K03563 csrA; carbon storage regulator
D SM39_0701 bifunctional two-component sensor kinase and response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SM39_0702 two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D SM39_1721 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SM39_1565 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1564 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1560 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1563 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1562 putative fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D SM39_1455 putative outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_1561 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_0964 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1275 putative fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_3032 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_3391 glnD; uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D SM39_3248 glnB; regulatory protein P-II for glutaminesynthetase K04751 glnB; nitrogen regulatory protein P-II 1
D SM39_4513 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SM39_4512 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_4348 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D SM39_3825 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SM39_3252 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SM39_3250 sigma-54 dependent transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SM39_2448 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SM39_0916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SM39_1816 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_2450 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4745 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4406 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D SM39_4687 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_2449 tap; methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_2451 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SM39_2452 cheA; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SM39_2446 cheY; chemotaxis regulator transmitting signal to flagellar motor component K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SM39_2447 cheB; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SM39_2835 ttrS; two-component system sensor kinase for tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D SM39_2836 ttrR; two-component response regulator of tetrathionate reductase complex K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D SM39_2832 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D SM39_2834 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D SM39_2833 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D SM39_0629 gltL; glutamate and aspartate transporter subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SM39_0630 gltK; glutamate and aspartate transporter subunit K10002 gltK; glutamate/aspartate transport system permease protein
D SM39_0631 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D SM39_0632 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SM39_4028 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SM39_4184 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D SM39_3630 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D SM39_2330 cioA; terminal oxidase subunit II K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SM39_0687 cydA; cytochrome d terminal oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SM39_2331 cioB; terminal oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SM39_0688 cydB; cytochrome d terminal oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SM39_0689 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_1017 wza; lipoprotein required for capsular polysaccharide translocation through the outer membrane K01991 wza; polysaccharide biosynthesis/export protein
D SM39_2355 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SM39_1018 wzb; tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SM39_2354 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_1019 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_4337 rffE; UDP-N-acetyl-D-glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SM39_4336 rffD; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D SM39_1753 fecI; RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SM39_2512 ECF-family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SM39_1752 fecR; transmembrane signaltransducer for ferric citrate transport K07165 fecR; transmembrane sensor
D SM39_0340 hasS; putative iron sensor protein K07165 fecR; transmembrane sensor
D SM39_2511 putative iron sensor protein K07165 fecR; transmembrane sensor
D SM39_2434 flgM; anti-sigma factor for FliA, sigma 28 K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D SM39_4793 speF; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D SM39_3636 speC; ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smar02024]
D SM39_0167 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SM39_4710 hfq; HF-I, host factor for RNA phage Q beta replication K03666 hfq; host factor-I protein
D SM39_2136 trpE; component I of anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SM39_2137 trpG; anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SM39_0703 aroG; 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase, phenylalanine repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_1634 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_0179 aroF; 3-deoxy-D-arabino-heptulosonate-7-phosphatesynthase, tyrosine-repressible K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SM39_3587 qseC; two-component system sensor kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SM39_3588 qseB; two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SM39_3252 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SM39_3250 sigma-54 dependent transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SM39_2456 flhD; DNA-binding transcriptional dual regulator with FlhC K02403 flhD; flagellar transcriptional activator FlhD
D SM39_2455 flhC; DNA-binding transcriptional dual regulator with FlhD K02402 flhC; flagellar transcriptional activator FlhC
D SM39_0659 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SM39_0760 two-component response regulator K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SM39_0761 putative N-acetyltransferase K20264 fusR; two-component system, NarL family, response regulator FusR
D SM39_0819 lsrK; autoinducer-2 kinase LsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D SM39_0820 lsrG; autoinducer-2 modifying protein LsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D SM39_pSMC1_18 trbJ; mating pair formation protein K20266 trbJ; type IV secretion system protein TrbJ
D SM39_pSMC1_20 putative conjugal transfer protein, TrbL-like K07344 trbL; type IV secretion system protein TrbL
D SM39_3943 putative ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SM39_3244 ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SM39_3940 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SM39_3241 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SM39_3941 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SM39_3242 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SM39_3939 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SM39_3243 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SM39_4280 livK; leucine/isoleucine/valine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_1985 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_2730 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_4279 livH1; leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_1981 ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SM39_2729 leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_4278 livM1; leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_1982 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SM39_2728 leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_4277 livG1; leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_1983 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_2727 leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_4276 livF1; leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_1984 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_2726 leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_4838 putative N-acyl homoserine lactone synthase, LuxI homolog K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D SM39_4192 putative quorum-sensing LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SM39_4837 putative quorum-sensing LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SM39_3102 LuxR-family transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_2534 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_4184 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D SM39_4183 modulator of Rnase II stability K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D SM39_2232 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_1911 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_0061 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_4028 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SM39_3910 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SM39_2103 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SM39_0376 ribD; fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SM39_2630 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SM39_1281 multidrug efflux pump K18306 mexH; membrane fusion protein, multidrug efflux system
D SM39_1282 multidrug efflux pump K18307 mexI; multidrug efflux pump
D SM39_1920 multidrug efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SM39_2044 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_1964 putative oligopeptide transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2173 oppA; oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2174 oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2172 oppB; oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D SM39_2171 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D SM39_2170 oppD; oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D SM39_2169 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM39_2365 ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_2370 ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_4825 putative extracellular substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_2369 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SM39_2368 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SM39_2367 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SM39_2366 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SM39_4452 oxaA; putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM39_4236 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D SM39_4770 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D SM39_3975 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D SM39_0371 SecYEG protein translocase auxiliary subunit K03210 yajC; preprotein translocase subunit YajC
D SM39_0084 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM39_4287 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM39_4565 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D SM39_0170 ffh; signal recognition particle component with 4.5S RNA ffs K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM39_3662 putative phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:smar02030]
D SM39_0916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SM39_1816 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_2450 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4745 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4406 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D SM39_4687 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_2449 tap; methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_3926 malE; maltose transporter subunit K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D SM39_2763 putative ribose ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SM39_4494 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D SM39_0997 mglB; methyl-galactoside transporter subunit K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SM39_4363 dppA; dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_3044 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_0296 dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_2452 cheA; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SM39_2451 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SM39_2446 cheY; chemotaxis regulator transmitting signal to flagellar motor component K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SM39_2445 cheZ; chemotaxis regulator, protein phosphatase for CheY K03414 cheZ; chemotaxis protein CheZ
D SM39_2447 cheB; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SM39_2448 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SM39_2407 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D SM39_2413 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D SM39_2414 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SM39_2454 motA; chemotaxis protein MotA, motility protein A K02556 motA; chemotaxis protein MotA
D SM39_2453 motB; chemotaxis protein MotB, motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:smar02040]
D SM39_2405 fliE; flagellar basal-body component K02408 fliE; flagellar hook-basal body complex protein FliE
D SM39_2406 fliF; flagellar basal-body MS-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SM39_2407 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D SM39_2408 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D SM39_2409 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SM39_2410 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D SM39_2411 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D SM39_2412 fliL; flagellar biosynthesis protein K02415 fliL; flagellar protein FliL
D SM39_2413 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D SM39_2414 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SM39_2415 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SM39_2416 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SM39_2417 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D SM39_2418 fliR; flagellar export pore protein K02421 fliR; flagellar biosynthesis protein FliR
D SM39_2440 fhlE; flagellar protein K03516 flhE; flagellar protein FlhE
D SM39_2441 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D SM39_2442 flhB; predicted flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D SM39_2433 flgA; assembly protein for flagellar basal-bodyperiplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SM39_2432 flgB; flagellar component of cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D SM39_2431 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D SM39_2430 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SM39_2429 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D SM39_2428 flgF; flagellar component of cell-proximal portion of basal-body rod K02391 flgF; flagellar basal-body rod protein FlgF
D SM39_2427 flgG; flagellar component of cell-distal portion of basal-body rod K02392 flgG; flagellar basal-body rod protein FlgG
D SM39_2426 flgH; flagellar protein of basal-body outer-membrane L ring K02393 flgH; flagellar L-ring protein FlgH
D SM39_2425 flgI; predicted flagellar basal body protein K02394 flgI; flagellar P-ring protein FlgI
D SM39_2424 flgJ; predicted flagellar basal body protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SM39_2423 flgK; flagellar hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SM39_2422 flgL; flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SM39_2396 fliC; flagellin K02406 fliC; flagellin
D SM39_2397 fliD; flagellar filament capping protein K02407 fliD; flagellar hook-associated protein 2
D SM39_2398 fliS; flagellar protein potentiates polymerization K02422 fliS; flagellar secretion chaperone FliS
D SM39_2399 fliT; flagellar protein K02423 fliT; flagellar protein FliT
D SM39_2454 motA; chemotaxis protein MotA, motility protein A K02556 motA; chemotaxis protein MotA
D SM39_2453 motB; chemotaxis protein MotB, motility protein B K02557 motB; chemotaxis protein MotB
D SM39_2434 flgM; anti-sigma factor for FliA, sigma 28 K02398 flgM; negative regulator of flagellin synthesis FlgM
D SM39_2435 flgN; export chaperone for FlgK and FlgL K02399 flgN; flagellar biosynthesis protein FlgN
D SM39_2392 fliY; cystine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM39_2394 fliZ; flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D SM39_3728 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SM39_2456 flhD; DNA-binding transcriptional dual regulator with FlhC K02403 flhD; flagellar transcriptional activator FlhD
D SM39_2455 flhC; DNA-binding transcriptional dual regulator with FlhD K02402 flhC; flagellar transcriptional activator FlhC
D SM39_3825 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SM39_2395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D SM39_3945 metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:smar01501]
D SM39_1184 ompF; outer membrane pore protein N, non-specific K09476 ompF; outer membrane pore protein F
D SM39_2860 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D SM39_0397 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SM39_1732 glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SM39_1395 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SM39_1720 ampR; LysR-family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SM39_1721 ampC; class C beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SM39_2044 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_1964 putative oligopeptide transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2173 oppA; oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2174 oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2172 oppB; oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D SM39_2171 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D SM39_2170 oppD; oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D SM39_2169 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM39_0449 sdeX; multidrug efflux pump SdeX K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_1922 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_0448 sdeY; multidrug efflux pump SdeY K18138 acrB; multidrug efflux pump
D SM39_1921 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D SM39_1958 aminoglycoside/multidrug efflux system K18138 acrB; multidrug efflux pump
D SM39_1920 multidrug efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_4061 mrcA; fused penicillin-binding protein 1a: mureintransglycosylase/murein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM39_0617 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_1813 transpeptidase involved in peptidoglycan synthesis K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_0069 ftsI; transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_1814 transpeptidase involved in septal peptidoglycan synthesis K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_pSMC1_38 blaIMP-1; metallo-beta-lactamase IMP-1 K18782 blaIMP; metallo-beta-lactamase class B IMP [EC:3.5.2.6]
D SM39_pSMC1_41 blaCYM-8; AmpC-type beta-lactamase, CMY-8 K19095 blaCMY-1; beta-lactamase class C CMY-1 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:smar01502]
D SM39_0796 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_0077 ddlB; UDP-N-acetylmuramate: L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_2216 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_3904 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_0071 murF; UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SM39_0072 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM39_0075 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:smar01503]
D SM39_1492 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SM39_1493 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SM39_4369 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D SM39_0311 putative lipid A palmitoyl transferase precursor K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SM39_1615 arnB; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulosediphosphate) aminotransferase, PLP-dependent K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SM39_1616 arnC; undecaprenyl phosphate-L-Ara4FN transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D SM39_1617 arnA; fused UDP-L-Ara4N formyltransferase/UDP-GlcAC-4'-decarboxylase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D SM39_1618 arnD; putative polysaccharide deacetylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D SM39_1619 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SM39_1620 arnE; subunit of ArnE/ArnF undecaprenyl-phosphate-alpha-L-Ara4N flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D SM39_1621 arnF; subunit of ArnE/ArnF undecaprenyl-phosphate-alpha-L-Ara4N flippase K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D SM39_4761 pmrB; two-component system sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SM39_4762 pmrA; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D SM39_1668 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SM39_2060 sapA; predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D SM39_2061 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D SM39_2062 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D SM39_2063 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D SM39_2064 sapF; predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D SM39_4293 serralysin precursor K01406 prtC; serralysin [EC:3.4.24.40]
D SM39_1845 extracellular metalloproteinase K01406 prtC; serralysin [EC:3.4.24.40]
D SM39_3358 cutF; copper homeostasis lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D SM39_4571 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SM39_4572 cpxR; two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SM39_3075 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_4707 amiB; N-acetylmuramoyl-L-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_3414 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_2708 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_1648 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D SM39_0104 degP; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM39_3452 putative thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_0301 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_4503 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_4037 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM39_0449 sdeX; multidrug efflux pump SdeX K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_1922 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_0448 sdeY; multidrug efflux pump SdeY K18138 acrB; multidrug efflux pump
D SM39_1921 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D SM39_1958 aminoglycoside/multidrug efflux system K18138 acrB; multidrug efflux pump
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_3376 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smar01000]
C 01001 Protein kinases [BR:smar01001]
D SM39_0825 putative protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D SM39_4990 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SM39_2354 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_1019 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_0359 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SM39_1492 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SM39_4070 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SM39_2020 rstB; two-component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SM39_4571 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SM39_3481 creC; two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SM39_3166 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SM39_4761 pmrB; two-component system sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SM39_0277 putative two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0941 two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_3587 qseC; two-component system sensor kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SM39_0660 kdpD; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SM39_3796 arcB; hybrid sensory histidine kinase in two-component regulatory system with ArcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SM39_2942 tctE; two-component system sensor kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SM39_3508 rssA; swarming motility regulation two-component system, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SM39_3062 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SM39_2361 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SM39_3097 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SM39_4367 uhpB; two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SM39_0760 two-component response regulator K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SM39_2863 rcsD; phosphotransfer intermediate protein intwo-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SM39_2865 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SM39_0105 barA; hybrid sensory histidine kinase in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SM39_0701 bifunctional two-component sensor kinase and response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SM39_3332 two-component system sensor kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D SM39_1429 ducS; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SM39_4036 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SM39_3014 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SM39_4513 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SM39_3252 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SM39_2452 cheA; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SM39_2835 ttrS; two-component system sensor kinase for tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:smar01009]
D SM39_0774 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SM39_2487 type VI secretion system, serine/threonine protein phosphatase, PppA-like K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SM39_5003 serB; 3-phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:smar01002]
D SM39_0019 lspA; prolipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SM39_2364 type 4 prepilin-like protein leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_0436 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_0675 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D SM39_3200 guaA; GMP synthetase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_3770 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_1998 putative amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SM39_1530 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
D SM39_1756 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_1782 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_2810 spr; predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SM39_1661 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D SM39_1622 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC
D SM39_2931 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SM39_3799 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SM39_4469 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SM39_0640 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SM39_2702 Hsp31 molecular chaperone K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SM39_1912 DJ-1/PfpI-family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D SM39_0388 thiJ; 4-methyl-5(b-hydroxyethyl)-thiazolemonophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D SM39_0772 DJ-1/PfpI-family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D SM39_4928 putative exported protein K19235 ybiS; L,D-transpeptidase YbiS
D SM39_1648 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D SM39_1180 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D SM39_0711 putative membrane-associated CAAX amino terminal protease K07052 K07052; CAAX protease family protein
D SM39_1833 hypothetical protein K07052 K07052; CAAX protease family protein
D SM39_1188 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SM39_4171 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SM39_1765 dcp; dipeptidyl carboxypeptidase II K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D SM39_4293 serralysin precursor K01406 prtC; serralysin [EC:3.4.24.40]
D SM39_1845 extracellular metalloproteinase K01406 prtC; serralysin [EC:3.4.24.40]
D SM39_3418 ptrA; protease III K01407 ptrA; protease III [EC:3.4.24.55]
D SM39_4347 putative exported zinc-protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D SM39_4833 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SM39_3221 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D SM39_1862 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SM39_3104 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SM39_1489 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SM39_2959 metalloprotease K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SM39_0268 pepD; aminoacyl-histidine dipeptidase, peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D SM39_2075 putative peptidase/amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D SM39_2766 putative amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D SM39_3666 abgA; aminobenzoyl-glutamate utilization protein A K12940 abgA; aminobenzoyl-glutamate utilization protein A
D SM39_3667 abgB; aminobenzoyl-glutamate utilization protein B K12941 abgB; aminobenzoyl-glutamate utilization protein B
D SM39_0244 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SM39_0494 allC; allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SM39_2246 putative cell wall endopeptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SM39_0794 putative metallopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SM39_3390 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SM39_4245 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SM39_3516 pepP; proline aminopeptidase P II K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SM39_0127 iap; aminopeptidase in alkaline phosphatase isozyme conversion K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D SM39_2021 putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D SM39_4767 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SM39_1572 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SM39_3547 putative exported peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D SM39_3125 putative exported peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D SM39_3381 ecfE; protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SM39_1784 putative aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D SM39_2968 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D SM39_2616 hypothetical protein K09933 mtfA; MtfA peptidase
D SM39_4936 putative peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D SM39_1783 putative peptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D SM39_2024 putative secreted serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-]
D SM39_0104 degP; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM39_3809 degQ; serine endoprotease, periplasmic K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D SM39_3810 degS; exported protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D SM39_1697 putative prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D SM39_1408 ptrB; protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SM39_3079 serine protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SM39_0614 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_2069 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_1072 dacC; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_0775 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SM39_1994 putative penicillin-binding protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SM39_4969 ampH; penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D SM39_0477 putative penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SM39_4763 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SM39_1451 clpP; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SM39_0402 clpP; proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SM39_0404 lon; DNA-binding ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SM39_1206 putative protease La homolog K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D SM39_3913 lexA; DNA-binding transcriptional repressor of SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D SM39_2519 putative DNA polymerase V, subunit D K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SM39_pSMC2_71 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SM39_3268 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SM39_1413 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SM39_1571 prc; tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SM39_2195 sppA; protease 4 K04773 sppA; protease IV [EC:3.4.21.-]
D SM39_2109 sohB; putative protease K04774 sohB; serine protease SohB [EC:3.4.21.-]
D SM39_4250 pepE; peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D SM39_4097 glpG; predicted intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D SM39_4630 hslV; peptidase component of the HslUV protease K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SM39_0983 iaaA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SM39_1926 putative gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_0366 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SM39_3171 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SM39_4787 putative peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D SM39_4788 putative peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D SM39_3848 pmbA; predicted peptidase required for the maturationand secretion of the antibiotic peptide MccB17 K03592 pmbA; PmbA protein
D SM39_3860 tldD; predicted peptidase K03568 tldD; TldD protein
D SM39_1093 eco; ecotin, a serine protease inhibitor K08276 eco; ecotin
D SM39_3397 putative alpha-2-macroglobulin-like protease inhibitor K06894 yfhM; alpha-2-macroglobulin
D SM39_4713 hflC; modulator for HflB protease specific for phage lambda cII repressor K04087 hflC; modulator of FtsH protease HflC
D SM39_4712 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:smar01003]
D SM39_1020 predicted glycosyl transferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D SM39_4101 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SM39_4353 bcsA; cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D SM39_3794 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SM39_3396 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SM39_3575 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SM39_4061 mrcA; fused penicillin-binding protein 1a: mureintransglycosylase/murein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM39_4328 rffM; probable UDP-N-acetyl-D-mannosaminuronic acidtransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D SM39_4330 rffT; 4-alpha-l-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D SM39_2356 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4339 wecA; undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_1340 mdoH; glucans biosynthesis glucosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D SM39_3004 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D SM39_4906 putative glycosyl transferase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:smar01005]
D SM39_3376 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SM39_3375 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SM39_0081 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SM39_3378 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SM39_0510 lpxH; UDP-2,3-diacylglucosamine pyrophosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SM39_1167 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SM39_1353 lpxL; lauryl-acyl carrier protein (ACP)-dependent acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SM39_2548 htrB; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SM39_2245 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D SM39_2381 putative aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SM39_3881 putative aspartyl/asparaginyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SM39_3882 lpxP; palmitoleoyl-acyl carrier protein-dependent acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D SM39_2809 lpxT; undecaprenyl pyrophosphate phosphatase K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D SM39_4545 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SM39_1619 arnT; 4-amino-4-deoxy-L-arabinose transferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D SM39_0311 putative lipid A palmitoyl transferase precursor K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D SM39_1668 putative sulfatase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SM39_4369 eptB; phosphoethanolamine transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D SM39_1471 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphatesynthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SM39_1173 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SM39_3821 kdsC; 3-deoxy-d-manno-octulosonate 8-phosphatephosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SM39_3820 kdsD; arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SM39_4555 waaC; lipopolysaccharide heptosyltransferase-I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D SM39_4544 waaE; lipopolysaccharide core biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D SM39_4556 waaF; ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D SM39_4548 glycosyl transferase K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
D SM39_2285 putative glycosyl transferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-]
D SM39_4553 waaL; lipid A core: surface polymer ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D SM39_4549 waaQ; lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D SM39_0254 lpcA; D-sedoheptulose 7-phosphate isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D SM39_3351 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D SM39_3717 rfaE; fused heptose 7-phosphate kinase/heptose1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D SM39_4557 waaD; ADP-L-Glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D SM39_4329 wzyE; putative O-antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D SM39_2356 putative undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_4339 wecA; undecaprenyl-phosphatealpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SM39_2357 gne; UDP-GlcNAc C4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smar01011]
D SM39_3811 murA; UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SM39_4241 murB; UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SM39_0076 murC; UDP-N-acetylmuramate:L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SM39_0073 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SM39_0070 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SM39_0796 ddlA; D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_0077 ddlB; UDP-N-acetylmuramate: L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SM39_2216 dadX; alanine racemase 2, PLP-binding K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_3904 alr; alanine racemase 1, PLP-binding, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D SM39_4655 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SM39_0072 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SM39_0075 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SM39_3722 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_1090 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SM39_2269 mviN; innor membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D SM39_4061 mrcA; fused penicillin-binding protein 1a: mureintransglycosylase/murein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SM39_3575 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SM39_3396 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SM39_0617 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_1813 transpeptidase involved in peptidoglycan synthesis K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SM39_0069 ftsI; transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_1814 transpeptidase involved in septal peptidoglycan synthesis K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_0614 dacA; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_2069 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6b K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_1072 dacC; D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 6a K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SM39_0477 putative penicillin-binding protein K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SM39_4763 dacB; D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SM39_4969 ampH; penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D SM39_0775 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SM39_1994 putative penicillin-binding protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D SM39_3794 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SM39_4928 putative exported protein K19235 ybiS; L,D-transpeptidase YbiS
D SM39_1648 putative exported protein K19236 ycfS; L,D-transpeptidase YcfS
D SM39_1180 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D SM39_2968 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D SM39_1661 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D SM39_2810 spr; predicted peptidase, outer membrane lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SM39_2246 putative cell wall endopeptidase K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D SM39_5016 slt; lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SM39_3413 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SM39_2226 putative exported protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SM39_3000 mltB; membrane-bound lytic transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SM39_3635 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D SM39_0190 mltD; predicted membrane-bound lytic mureintransglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SM39_1594 membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D SM39_3683 membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D SM39_3255 putative solute-binding transglycosylase K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D SM39_1380 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SM39_0615 rlpA; minor lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SM39_3075 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_4707 amiB; N-acetylmuramoyl-L-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_3414 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_2708 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_1120 amiD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_0094 ampD; N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_1649 lppA; murein-lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:smar01004]
D SM39_1375 fabD; malonyl-CoA-[acyl-carrier-protein] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SM39_2342 putative 3-oxoacyl-(acyl-carrier-protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM39_1374 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SM39_2963 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SM39_1203 putative 3-oxoacyl-[acyl-carrier-protein]synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_1378 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SM39_3894 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_2504 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4956 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_4376 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1376 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_3328 putative short chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SM39_1205 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SM39_3377 fabZ; (3R)-hydroxymyristoyl acyl carrier protein dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_1831 putative thioesterase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SM39_1424 putative short-chain alcohol dehydrogenase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SM39_0504 tesA; acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SM39_0418 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SM39_2149 putative thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D SM39_0408 putative thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D SM39_2335 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D SM39_2336 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D SM39_4658 acs; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SM39_2232 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_1911 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_0061 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_2740 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D SM39_3915 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SM39_1373 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SM39_3724 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SM39_3693 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:smar01008]
D SM39_4669 MbtH-like protein K05375 mbtH; MbtH protein
D SM39_1906 putative siderophore biosynthesis protein K05375 mbtH; MbtH protein
D SM39_4674 entB; isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SM39_2652 pswP; putative 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D SM39_4673 entE; enterobactin synthase subunit E K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SM39_4660 putative enterobactin synthetase, containing condensation domain K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D SM39_4670 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D SM39_1905 siderophore synthetase CbsF homolog, containing non-ribosomal peptide synthetase modules K24101 vabF; L-arginine---[L-arginyl-carrier protein] ligase [EC:6.2.1.63]
C 01006 Prenyltransferases [BR:smar01006]
D SM39_0383 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SM39_4754 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SM39_3383 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SM39_4709 miaA; tRNA delta-2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SM39_4628 menA; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SM39_3916 ubiA; p-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SM39_0392 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:smar01007]
D SM39_3036 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SM39_0647 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SM39_3581 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SM39_1683 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM39_4050 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM39_0844 probable tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM39_0512 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM39_2268 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM39_1007 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM39_0018 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM39_4831 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM39_0623 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM39_3473 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM39_2255 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM39_1185 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM39_3214 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM39_4418 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM39_4417 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM39_1150 serS; seryl-tRNA synthetase, also chargesselenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM39_3357 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM39_1603 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM39_0162 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM39_1607 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM39_1608 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM39_1183 aspC; aspartate aminotransferase, PLP-dependent K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D SM39_4431 avtA; valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D SM39_2904 putative aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SM39_3011 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D SM39_3901 tyrB; tyrosine aminotransferase, tyrosine-repressible, PLP-dependent K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SM39_0246 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D SM39_0798 putative aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D SM39_1054 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SM39_4558 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SM39_1297 putative aminotransferase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D SM39_0730 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SM39_2743 putative aminotransferase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SM39_1717 malY; bifunctional beta-cystathionase, PLP-dependent/regulator of maltose regulon K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_2266 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_4010 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SM39_4939 putative omega-amino acid-pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SM39_4030 argD; bifunctional acetylornithine aminotransferase/succinyl diaminopimelate aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SM39_2326 astC; succinylornithine transaminase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D SM39_3763 puuE; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SM39_1865 dat; diaminobutyrate-2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D SM39_0728 bioA; 7,8-diaminopelargonic acid synthase, PLP-dependent K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SM39_0096 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SM39_4199 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SM39_1581 phnW; 2-aminoethylphosphonate: pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D SM39_1160 serC; 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SM39_0243 serine-pyruvate aminotransferase K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D SM39_1615 arnB; uridine 5'-(beta-1-threo-pentapyranosyl-4-ulosediphosphate) aminotransferase, PLP-dependent K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D SM39_4332 rffA; lipopolysaccharide biosynthesis protein 1 K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:smar00194]
D SM39_4471 atpC; F1 sector of membrane-bound ATP synthase, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SM39_4472 atpD; F1 sector of membrane-bound ATP synthase, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SM39_4473 atpG; F1 sector of membrane-bound ATP synthase, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SM39_4474 atpA; F1 sector of membrane-bound ATP synthase, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SM39_4475 atpH; F1 sector of membrane-bound ATP synthase, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SM39_4476 atpF; F0 sector of membrane-bound ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SM39_4477 atpE; F0 sector of membrane-bound ATP synthase, subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SM39_4478 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SM39_4479 atpI; ATP synthase, membrane-bound accessory subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smar03000]
D SM39_4966 hpaA; AraC-family transcriptional regulator K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D SM39_0156 chbR; DNA-binding transcriptional dual regulator K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D SM39_4889 AraC-family transcriptional regulator K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D SM39_2637 hypothetical protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_2640 hypothetical protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_0966 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_3614 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_1402 sdeR; putative regulator of SdeAB efflux pump K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_4927 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_5020 rob; DNA-binding transcriptional activator Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_0302 feaR; DNA-binding transcriptional dual regulator K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB
D SM39_2501 AraC-family transcriptional regulator K21746 rclR; AraC family transcriptional regulator, reactive chlorine species (RCS)-specific activator of rcl operon
D SM39_3463 AraC-family transcriptional regulator K13652 K13652; AraC family transcriptional regulator
D SM39_1806 AraC-family transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D SM39_0305 fused DNA-binding transcriptional dualregulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SM39_3157 putative adaptative response regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SM39_0799 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_0765 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_3407 gcvA; glycine cleavage system regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_1925 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_2700 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_2531 LysR-family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SM39_4194 ilvY; ilvC expression LysR-family transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D SM39_4266 metR; LysR-family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SM39_0014 nhaR; DNA-binding transcriptional activator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D SM39_4649 oxyR; hydrogen peroxide-inducible regulon activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SM39_3523 argP; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SM39_0060 leuO; transcriptional regulator of the leu operon K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D SM39_4900 LysR-family transcriptional regulator K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator
D SM39_0484 allS; DNA-binding transcriptional activator K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon
D SM39_0977 DNA-binding transcriptional dual regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D SM39_2105 cysB; cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SM39_2373 cbl; LysR-family transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D SM39_2996 dsdC; D-serine deaminase activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D SM39_3665 abgR; LysR-family transcriptional regulator K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D SM39_3536 LysR-family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D SM39_4917 LysR-family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator
D SM39_1720 ampR; LysR-family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SM39_2628 nac; nitrogen assimilation LysR-family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D SM39_3855 aaeR; transcriptional activator of the aaeXAB operon K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D SM39_4940 LysR-family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D SM39_4206 hdfR; LysR-family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D SM39_1087 DNA-binding transcriptional repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D SM39_4098 glpR; sigma 54-dependent transcriptional regulator of rtcBA expression K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SM39_1825 DeoR-family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D SM39_3497 DeoR-family transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D SM39_4836 putative transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SM39_3180 srlR; glucitol operon repressor K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D SM39_4095 ulaR; DNA-binding transcriptional dual regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D SM39_1889 putative LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_0996 galS; DNA-binding transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_2757 LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_4496 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_4012 LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_3437 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_2156 putative xylitol repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_3920 ccpA; glucose-resistance amylase LacI-family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SM39_4424 LacI-family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D SM39_4632 cytR; LacI-family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SM39_0064 fruR; DNA-binding transcriptional dual regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SM39_3673 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SM39_4817 treR; DNA-binding transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D SM39_4888 ascG; DNA-binding transcriptional repressor K03487 ascG; LacI family transcriptional regulator, asc operon repressor
D SM39_1659 purR; purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SM39_4109 gntR; gluconate utilization operon repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D SM39_1445 ebgR; DNA-binding transcriptional repressor K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D SM39_1719 malI; DNA-binding transcriptional repressor K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D SM39_4807 phnF; predicted DNA-binding transcriptional regulator of phosphonate uptake and biodegradation K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D SM39_1544 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D SM39_3685 GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SM39_2221 fadR; DNA-binding transcriptional dual regulator of fatty acid metabolism K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D SM39_3607 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SM39_1437 GntR-family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SM39_3776 uxuR; uxu operon GntR-family transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D SM39_1496 GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SM39_2957 GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SM39_3764 GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SM39_3321 GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SM39_4147 GntR-family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SM39_1848 GntR-family transcriptional regulator K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D SM39_3461 DNA-binding transcriptional repressor K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D SM39_0955 betI; DNA-binding transcriptional repressor K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D SM39_0450 acrR; DNA-binding transcriptional repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SM39_4536 slmA; TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D SM39_1667 TetR-family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SM39_0835 TetR-family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor
D SM39_4651 TetR-family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SM39_0750 predicted DNA-binding transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D SM39_4484 asnC; DNA-binding transcriptional dual regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D SM39_1146 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SM39_0899 AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SM39_0413 AsnC-family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D SM39_4192 putative quorum-sensing LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SM39_4837 putative quorum-sensing LuxR-family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D SM39_3102 LuxR-family transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_2534 rcsA; colanic acid capsular biosynthesis activation protein A K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
D SM39_0959 putative signal transduction protein K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides
D SM39_4087 malT; fused conserved protein: DNA-binding transcriptional activator/maltotriose-ATP-binding protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D SM39_0810 MarR-family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SM39_1678 slyA; DNA-binding transcriptional activator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SM39_3341 emrR; negative regulator of the multidrug operon K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D SM39_1772 MarR-family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D SM39_4371 MarR-family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SM39_pSMC1_13 merR; transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D SM39_pSMC1_09 merD; transcriptional regulator K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D SM39_0481 cueR; DNA-binding transcriptional activator of copper-responsive regulon genes K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SM39_1917 MerR-family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SM39_3967 zntR; Zn(II)-responsive regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D SM39_1279 MerR-family transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SM39_0651 fur; DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SM39_3910 zur; zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SM39_3946 iclR; DNA-binding transcriptional repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D SM39_2604 IclR-family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D SM39_0486 allR; DNA-binding transcriptional repressor K10973 allR; IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
D SM39_1575 kdgR; IclR-family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D SM39_4028 crp; DNA-binding transcriptional dual regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SM39_2009 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SM39_3229 iscR; DNA-binding transcriptional repressor K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SM39_4716 nsrR; transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D SM39_1399 transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB
D SM39_1696 putative transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D SM39_1386 putative manganese transport regulator K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SM39_2242 hexR; hex-regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D SM39_4240 birA; bifunctional protein synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SM39_3879 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SM39_5017 trpR; DNA-binding transcriptional repressor, tryptophan-binding K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D SM39_0901 prpR; DNA-binding transcriptional activator K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D SM39_4752 sfsB; sugar fermentation stimulation protein B K07724 ner; Ner family transcriptional regulator
D SM39_0052 sgrR; DNA-binding transcriptional regulator K11925 sgrR; SgrR family transcriptional regulator
D SM39_5005 nadR; bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SM39_2781 transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D SM39_1529 puuR; transcriptional regulator of the polyamine metabolism genes K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D SM39_1228 putative transcriptional repressor K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D SM39_3831 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SM39_1840 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D SM39_0461 cdaR; carbohydrate diacid transcriptional activator K02647 cdaR; carbohydrate diacid regulator
D SM39_0714 modE; DNA-binding transcriptional dual regulator K02019 modE; molybdate transport system regulatory protein
D SM39_1909 hypothetical protein K21829 dauR; D-arginine utilization repressor
D SM39_4930 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D SM39_2438 putative DNA-binding protein K07726 K07726; putative transcriptional regulator
D SM39_4635 metJ; DNA-binding transcriptional repressor, S-adenosylmethionine-binding K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D SM39_2388 putA; fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SM39_0355 putative plasmid-related PIN domain protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D SM39_0399 bolA; transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SM39_pSMC2_17 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SM39_4251 rfaH; transcriptional activator K05785 rfaH; transcriptional antiterminator RfaH
D SM39_4750 argR; DNA-binding transcriptional dual regulator, L-arginine-binding K03402 argR; transcriptional regulator of arginine metabolism
D SM39_0643 nagC; DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine K02565 nagC; N-acetylglucosamine repressor
D SM39_1736 dgsA; DNA-binding transcriptional repressor K15545 mlc; transcriptional regulator of PTS gene
D SM39_4412 mtlR; DNA-binding repressor K02562 mtlR; mannitol operon repressor
D SM39_2621 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SM39_2049 tyrR; DNA-binding transcriptional dual regulator, tyrosine-binding K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D SM39_3368 cadC; DNA-binding transcriptional activator K03765 cadC; transcriptional activator of cad operon
D SM39_3113 gcvR; DNA-binding transcriptional repressor, regulatory protein accessory to GcvA K03567 gcvR; glycine cleavage system transcriptional repressor
D SM39_2565 paaX; DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D SM39_2056 pspF; DNA-binding transcriptional activator K03974 pspF; psp operon transcriptional activator
D SM39_2053 pspC; DNA-binding transcriptional activator K03973 pspC; phage shock protein C
D SM39_3706 dhaR; PTS-dependent dihydroxyacetone kinase operon regulator K05880 dhaR; transcriptional activator for dhaKLM operon
D SM39_3842 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D SM39_2695 hypothetical protein K07733 alpA; prophage regulatory protein
D SM39_0908 putative FMN-binding protein K07734 paiB; transcriptional regulator
D SM39_pSMC1_43 hypothetical protein K07735 algH; putative transcriptional regulator
D SM39_pSMC1_45 hypothetical protein K07735 algH; putative transcriptional regulator
D SM39_3620 hypothetical protein K07735 algH; putative transcriptional regulator
D SM39_1412 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D SM39_pSMC1_06 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SM39_3580 dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SM39_0375 nrdR; transcriptional repressor K07738 nrdR; transcriptional repressor NrdR
D SM39_0271 crl; DNA-binding transcriptional regulator K11926 crl; sigma factor-binding protein Crl
D SM39_1229 putative DNA-binding transcriptional regulator K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D SM39_0066 mraZ; hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:smar03021]
D SM39_3970 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM39_4230 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM39_4229 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM39_4526 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SM39_3728 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SM39_3274 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SM39_1753 fecI; RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SM39_2512 ECF-family RNA polymerase sigma factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SM39_4284 rpoH; RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D SM39_3825 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D SM39_2395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SM39_0044 hepA; RNA polymerase-associated helicase protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D SM39_4772 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D SM39_0378 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D SM39_4235 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D SM39_3803 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SM39_3802 sspB; ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D SM39_3273 rseA; anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA
D SM39_3272 rseB; anti-sigma factor K03598 rseB; sigma-E factor negative regulatory protein RseB
D SM39_3271 rseC; sigma-E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D SM39_1412 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D SM39_pSMC1_06 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SM39_3580 dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SM39_4764 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D SM39_4074 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D SM39_4340 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SM39_3362 rof; ROF protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:smar03019]
D SM39_1368 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SM39_3863 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SM39_3267 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM39_4717 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM39_4703 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SM39_4343 rhlB; putative ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SM39_0751 rhlE; RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SM39_4779 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM39_4308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_4777 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SM39_4340 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D SM39_4615 pfkA; 6-phosphofructokinase I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SM39_0011 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D SM39_4686 groEL; chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM39_4710 hfq; HF-I, host factor for RNA phage Q beta replication K03666 hfq; host factor-I protein
D SM39_3151 ppk; polyphosphate kinase, component of RNA degradosome K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SM39_1992 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SM39_3583 pcnB; poly(A) polymerase I K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SM39_3428 nudH; nucleoside hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SM39_0163 csrA; pleiotropic regulatory protein for carbon source metabolism K03563 csrA; carbon storage regulator
D SM39_3868 csrD; putative signal transduction protein K18765 csrD; RNase E specificity factor CsrD
D SM39_4627 rraA; regulator of ribonuclease activity K02553 rraA; regulator of ribonuclease activity A
D SM39_4827 rraB; ribonuclease E inhibitor protein K09893 rraB; regulator of ribonuclease activity B
D SM39_3828 putative ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
D SM39_2025 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D SM39_3576 hrpB; ATP-dependent RNA helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:smar03011]
D SM39_1163 rpsA; 30S ribosomal subunit protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SM39_3388 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SM39_3989 rpsC; 30S ribosomal subunit protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SM39_3971 rpsD; 30S ribosomal subunit protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SM39_3978 rpsE; 30S ribosomal subunit protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SM39_4727 rpsF; 30S ribosomal subunit protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SM39_4002 rpsG; 30S ribosomal subunit protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SM39_3981 rpsH; 30S ribosomal subunit protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SM39_3805 rpsI; 30S ribosomal subunit protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SM39_3996 rpsJ; 30S ribosomal subunit protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SM39_3972 rpsK; 30S ribosomal subunit protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SM39_4003 rpsL; 30S ribosomal subunit protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SM39_3973 rpsM; 30S ribosomal subunit protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SM39_3982 rpsN; 30S ribosomal subunit protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SM39_4776 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SM39_0171 rpsP; 30S ribosomal subunit protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SM39_3986 rpsQ; 30S ribosomal subunit protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SM39_4729 rpsR; 30S ribosomal subunit protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SM39_3991 rpsS; 30S ribosomal subunit protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SM39_0015 rpsT; 30S ribosomal subunit protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SM39_3726 rpsU; 30S ribosomal subunit protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SM39_4233 rplA; 50S ribosomal subunit protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SM39_3992 rplB; 50S ribosomal subunit protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SM39_3995 rplC; 50S ribosomal subunit protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SM39_3994 rplD; 50S ribosomal subunit protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SM39_3983 rplE; 50S ribosomal subunit protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SM39_3980 rplF; 50S ribosomal subunit protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SM39_4730 rplI; 50S ribosomal subunit protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SM39_4232 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SM39_4234 rplK; 50S ribosomal subunit protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SM39_4231 rplL; 50S ribosomal subunit protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SM39_3806 rplM; 50S ribosomal subunit protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SM39_3985 rplN; 50S ribosomal subunit protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SM39_3976 rplO; 50S ribosomal subunit protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SM39_3988 rplP; 50S ribosomal subunit protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SM39_3969 rplQ; 50S ribosomal subunit protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SM39_3979 rplR; 50S ribosomal subunit protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SM39_0174 rplS; 50S ribosomal subunit protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SM39_1606 rplT; 50S ribosomal subunit protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SM39_4755 rpmU; 50S ribosomal subunit protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SM39_3990 rplV; 50S ribosomal subunit protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SM39_3993 rplW; 50S ribosomal subunit protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SM39_3984 rplX; 50S ribosomal subunit protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SM39_4756 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SM39_4540 rpmB; 50S ribosomal subunit protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SM39_3987 rpmC; 50S ribosomal subunit protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SM39_3977 rpmD; 50S ribosomal subunit protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SM39_0447 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D SM39_4634 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SM39_1372 rpmF; 50S ribosomal subunit protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SM39_4541 rpmG; 50S ribosomal subunit protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SM39_4449 rpmH; 50S ribosomal subunit protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SM39_1605 rpmI; 50S ribosomal subunit protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SM39_0446 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SM39_3974 rpmJ; 50S ribosomal subunit protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SM39_2822 rplY; 50S ribosomal subunit protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SM39_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA22 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA17 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA20 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smar03009]
D SM39_3267 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM39_0825 putative protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D SM39_4703 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SM39_3266 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D SM39_4758 obgE; GTPase involved in cell partioning and DNA repair K03979 obgE; GTPase [EC:3.6.5.-]
D SM39_1412 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D SM39_pSMC1_06 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D SM39_3580 dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SM39_4772 nusA; transcription termination/antitermination L factor K02600 nusA; transcription termination/antitermination protein NusA
D SM39_0378 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D SM39_4235 nusG; transcription termination factor K02601 nusG; transcription termination/antitermination protein NusG
D SM39_2820 rsuA; 16S rRNA pseudouridylate 516 synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SM39_0038 ksgA; S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SM39_3963 rsmB; ribosomal RNA small subunit methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SM39_4986 rsmC; 16S rRNA m2G1207 methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SM39_4288 rsmD; catalyzes the methylation of 16S rRNA at position G966 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SM39_3618 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SM39_1566 rsmF; predicted methyltransferase K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D SM39_4480 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SM39_0067 mraW; S-adenosyl-dependent methyltransferase activity on membrane-located substrates K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SM39_3789 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SM39_4170 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D SM39_2296 rrmA; ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D SM39_4718 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SM39_4766 rrmJ; 23S rRNA methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SM39_0915 23S rRNA mA1618 methyltransferase, SAM-dependent K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D SM39_3767 rlmG; putative ribosomal RNA small subunit methyltransferase D K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D SM39_0618 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SM39_1218 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SM39_4173 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SM39_1197 rlmL; predicted methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D SM39_3405 mtfA; putative RNA 2'-O-ribose methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D SM39_3218 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SM39_0106 rumA; 23S rRNA (uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SM39_1110 rumB; 23S rRNA m(5)U747 methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D SM39_3526 putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SM39_0043 rluA; 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SM39_2112 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SM39_1369 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SM39_0184 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SM39_1505 rluE; 23S rRNA pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D SM39_3191 rluF; ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SM39_3345 putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SM39_4988 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SM39_2272 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D SM39_1103 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D SM39_0172 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D SM39_1156 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D SM39_3877 prmA; methylase for 50S ribosomal subunit protein L11 K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SM39_2970 prmB; putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SM39_1491 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D SM39_1368 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SM39_3863 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SM39_pSMC1_42 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SM39_3621 putative holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SM39_2281 dbpA; ATP-dependent RNA helicase, specific for 23S rRNA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D SM39_4779 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SM39_3277 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D SM39_4702 rsgA; probable GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SM39_3210 engA; GTP-binding protein K03977 engA; GTPase
D SM39_4711 hflX; predicted GTPase K03665 hflX; GTPase
D SM39_3957 rimN; putative dsRNA-binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SM39_4525 spoT; bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SM39_4774 rbfA; 30s ribosome binding factor K02834 rbfA; ribosome-binding factor A
D SM39_4771 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SM39_0513 hypothetical protein K14761 rlbA; ribosome-associated protein
D SM39_0619 hypothetical protein K09710 ybeB; ribosome-associated protein
D SM39_0635 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D SM39_4765 hypothetical protein K07574 yhbY; RNA-binding protein
D SM39_4409 hypothetical protein K14762 yibL; ribosome-associated protein
D SM39_3849 hypothetical protein K09889 yjgA; ribosome-associated protein
D SM39_1202 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D SM39_3826 hpf; probable sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D SM39_0182 raiA; cold shock protein associated with 30S ribosomal subunit K05809 raiA; ribosome-associated inhibitor A
D SM39_1459 engD; GTP-dependent nucleic acid-binding protein K06942 ychF; ribosome-binding ATPase
D SM39_1371 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:smar03016]
D SM39_3721 cca; multifunctional tRNA nucleotidyltransferase/2'3'-cyclicphosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SM39_3036 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SM39_3357 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SM39_0018 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SM39_0623 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM39_1007 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SM39_0647 glnS; glutamyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SM39_2268 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM39_3473 lysS; lysine tRNA synthetase, constitutive K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SM39_2255 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM39_0162 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SM39_1185 asnS; asparaginyl tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SM39_1603 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SM39_1150 serS; seryl-tRNA synthetase, also chargesselenocysteinyl-tRNA with serine K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SM39_0512 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SM39_4831 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SM39_3214 hisS; histidyl tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SM39_1607 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SM39_1608 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SM39_1683 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM39_4050 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM39_0844 probable tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SM39_4518 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SM39_1391 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SM39_3632 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SM39_3356 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D SM39_2937 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SM39_4775 truB; tRNA pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SM39_0140 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D SM39_3228 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM39_3957 rimN; putative dsRNA-binding protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SM39_4709 miaA; tRNA delta-2-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SM39_4453 trmE; probable tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SM39_4481 gidA; tRNA uridine 5-carboxymethylaminomethylmodification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SM39_2193 selD; selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SM39_4736 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SM39_4450 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SM39_1664 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D SM39_4534 rph; defective ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SM39_2073 rnb; ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D SM39_2231 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D SM39_3577 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SM39_5012 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D SM39_4418 glyQ; glycine tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SM39_4417 glyS; glycine tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SM39_3581 gluQ; glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SM39_0478 putative suppressor of ushA transcription K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SM39_3256 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SM39_3908 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SM39_3878 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SM39_0753 dusC; tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D SM39_0638 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SM39_3186 putative SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SM39_2260 cmoA; putative methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SM39_2262 cmoB; putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D SM39_1176 smtA; S-adenosylmethionine-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D SM39_5024 lasT; putative tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D SM39_4653 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D SM39_0173 trmD; tRNA (guanine-1-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SM39_3345 putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SM39_4524 trmH; tRNA (guanosine-2'-O)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D SM39_3230 trmJ; predicted methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D SM39_4570 putative tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SM39_3276 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D SM39_3395 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D SM39_3526 putative ribosomal large subunit pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SM39_0043 rluA; 23S rRNA/tRNA pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SM39_1502 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SM39_2037 ttcA; predicted C32 tRNA thiolase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SM39_4295 tusA; tRNA 2-thiouridine synthesizing protein A K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D SM39_4004 tusB; tRNA 2-thiouridine synthesizing protein B K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D SM39_4005 tusC; tRNA 2-thiouridine synthesizing protein C K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D SM39_4006 tusD; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D SM39_1267 tusE; sulfur transfer protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D SM39_3226 iscA; Fe-S cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D SM39_3486 putative aminomethyl transferase K06980 ygfZ; tRNA-modifying protein YgfZ
D SM39_4828 miaE; tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D SM39_2964 mnmC; fused 5-methylaminomethyl-2-thiouridine-formingenzyme methyltransferase/FAD-dependent demodification enzyme K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D SM39_0369 queA; S-adenosylmethionine: tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SM39_0409 queuosine biosynthesis protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SM39_0121 sscR; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SM39_0118 radical SAM superfamily protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SM39_3402 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SM39_3661 putative NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SM39_4704 putative 4Fe-4S binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SM39_2151 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SM39_2192 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D SM39_0370 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SM39_0385 thiI; sulfurtransferase required for thiamine and 4-thiouridine biosynthesis K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SM39_3364 tilS; tRNA (Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SM39_3108 putative ATPase/acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D SM39_2234 putative glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SM39_3725 gcp; probable O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SM39_4706 putative ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SM39_3412 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SM39_4717 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SM39_4777 pnp; polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SM39_3168 putative plasmid-related PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D SM39_2443 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:smar03012]
D SM39_2086 putative translation initiation factor K03113 EIF1; translation initiation factor 1
D SM39_4773 infB; fused protein chain initiation factor 2, IF2:membrane protein/conserved protein K02519 infB; translation initiation factor IF-2
D SM39_1604 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SM39_4017 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SM39_3387 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D SM39_4237 elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_4000 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_4001 fusA; elongation factor G K02355 fusA; elongation factor G
D SM39_1972 protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D SM39_4396 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D SM39_1467 prfA; peptide chain release factor RF-1 K02835 prfA; peptide chain release factor 1
D SM39_3385 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SM39_1468 hemK; protein methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SM39_1461 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SM39_1140 infA; initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SM39_4690 efp; Elongation factor EF-P K02356 efp; elongation factor P
D SM39_2803 elongation factor P-like protein K02356 efp; elongation factor P
D SM39_4699 poxA; predicted lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D SM39_4689 radical SAM superfamily protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SM39_2966 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D SM39_3474 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D SM39_4991 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D SM39_3966 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D SM39_3359 putative peptide chain release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:smar03110]
D SM39_1139 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SM39_0186 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SM39_0403 clpX; ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SM39_4629 hslU; molecular chaperone and ATPase component of HslUV protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SM39_0011 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D SM39_3224 hscA; DnaK-like molecular chaperone specific for IscU K04044 hscA; molecular chaperone HscA
D SM39_3158 hypothetical protein K04046 yegD; hypothetical chaperone protein
D SM39_4686 groEL; chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM39_0012 dnaJ; chaperone Hsp40, co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D SM39_4073 cbpA; curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK K05516 cbpA; curved DNA-binding protein
D SM39_0042 djlA; DnaJ-like protein, membrane anchored K05801 djlA; DnaJ like chaperone protein
D SM39_3225 hscB; DnaJ-like molecular chaperone specific for IscU K04082 hscB; molecular chaperone HscB
D SM39_4066 hslO; heat shock protein K04083 hslO; molecular chaperone Hsp33
D SM39_3282 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D SM39_4436 ibpA; heat shock chaperone K04080 ibpA; molecular chaperone IbpA
D SM39_4435 ibpB; heat shock chaperone K04081 ibpB; molecular chaperone IbpB
D SM39_4065 hslR; heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D SM39_4685 groES; chaperone K04078 groES; chaperonin GroES
D SM39_0104 degP; serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D SM39_4767 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SM39_4478 atpB; F0 sector of membrane-bound ATP synthase, subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SM39_1562 putative fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D SM39_4565 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D SM39_4182 spy; envelope stress induced periplasmic protein K06006 cpxP; periplasmic protein CpxP/Spy
D SM39_4573 cpxP; extracytoplasmic stress protein K06006 cpxP; periplasmic protein CpxP/Spy
D SM39_4819 putative chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_0650 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SM39_4037 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM39_0511 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SM39_0406 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SM39_4008 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SM39_4733 fklB; peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D SM39_0020 fkpB; FKBP-type peptidyl-prolyl cis-trans isomerase, rotamase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D SM39_4013 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SM39_4346 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D SM39_0040 surA; peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SM39_4341 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D SM39_3346 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D SM39_0502 putative thioredoxin K05838 ybbN; putative thioredoxin
D SM39_1101 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D SM39_2275 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D SM39_4564 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D SM39_1663 grxD; probable monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SM39_3452 putative thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_0301 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_4503 dsbA; periplasmic protein disulfide isomerase I K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SM39_2223 dsbB; oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D SM39_3477 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SM39_4679 dsbD; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D SM39_2982 ccmG; periplasmic thioredoxin CcmG of cytochrome C biogenesis K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:smar04131]
D SM39_3219 ndk; multifunctional nucleoside diphosphate kinaseand apyrimidinic endonuclease and 3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SM39_2617 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_2201 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_0706 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_2243 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_1650 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:smar04121]
C 03051 Proteasome [BR:smar03051]
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:smar03032]
D SM39_0193 rnhA; ribonuclease HI, degrades RNA of DNA-RNA hybrids K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SM39_4211 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D SM39_0405 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D SM39_1609 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SM39_1164 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SM39_4446 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D SM39_0545 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_1233 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_3905 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SM39_3727 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_3373 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM39_4445 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM39_4832 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SM39_0621 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM39_1382 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM39_0194 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM39_0456 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM39_4987 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SM39_0557 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_1414 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_2774 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_3374 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM39_1731 putative DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D SM39_4053 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_0227 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_0655 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D SM39_2866 gyrA; DNA gyrase type II topoisomerase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SM39_4443 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SM39_3694 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM39_3699 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM39_2106 topA; DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SM39_2191 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:smar03036]
D SM39_3267 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SM39_2179 hns; global DNA-binding transcriptional dualregulator H-NS K03746 hns; DNA-binding protein H-NS
D SM39_2690 DNA-binding protein, H-NS-like K03746 hns; DNA-binding protein H-NS
D SM39_4211 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D SM39_0405 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D SM39_1609 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SM39_1164 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SM39_4073 cbpA; curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK K05516 cbpA; curved DNA-binding protein
D SM39_4072 cbpM; chaperone-modulator protein K18997 cbpM; chaperone modulatory protein CbpM
D SM39_2637 hypothetical protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_2640 hypothetical protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_0966 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_3614 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_1402 sdeR; putative regulator of SdeAB efflux pump K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_4927 AraC-family transcriptional regulator K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_5020 rob; DNA-binding transcriptional activator Rob K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D SM39_4446 dnaA; chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator K02313 dnaA; chromosomal replication initiator protein
D SM39_3792 diaA; DnaA initiator-associating protein K12961 diaA; DnaA initiator-associating protein
D SM39_1217 hspQ; DNA-binding protein, hemimethylated K11940 hspQ; heat shock protein HspQ
D SM39_0922 dps; Fe-binding and storage protein K04047 dps; starvation-inducible DNA-binding protein
D SM39_2165 putative ferritin K04047 dps; starvation-inducible DNA-binding protein
D SM39_3879 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SM39_4710 hfq; HF-I, host factor for RNA phage Q beta replication K03666 hfq; host factor-I protein
D SM39_3523 argP; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SM39_1146 lrp; DNA-binding transcriptional dual regulator, leucine-binding K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SM39_0899 AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SM39_2823 ndpA; nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D SM39_0226 hypothetical protein K06899 ndpA; nucleoid-associated protein
D SM39_1179 mukB; chromosome partition protein K03632 mukB; chromosome partition protein MukB
D SM39_1178 mukE; chromosome partition protein K03804 mukE; chromosome partition protein MukE
D SM39_1177 mukF; chromosome partition protein K03633 mukF; chromosome partition protein MukF
D SM39_0079 ftsA; ATP-binding cell division protein involved in recruitment of FtsK to Z ring K03590 ftsA; cell division protein FtsA
D SM39_0137 ftsB; cell division protein K05589 ftsB; cell division protein FtsB
D SM39_4286 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SM39_0069 ftsI; transpeptidase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_1814 transpeptidase involved in septal peptidoglycan synthesis K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SM39_1147 ftsK; DNA-binding membrane protein required for chromosome resolution and partitioning K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SM39_0068 ftsL; membrane bound cell division protein at septum containing leucine zipper motif K03586 ftsL; cell division protein FtsL
D SM39_4631 ftsN; essential cell division protein K03591 ftsN; cell division protein FtsN
D SM39_0078 ftsQ; membrane anchored protein involved in growth of wall at septum K03589 ftsQ; cell division protein FtsQ
D SM39_0074 ftsW; integral membrane protein involved instabilizing FstZ ring during cell division K03588 ftsW; cell division protein FtsW
D SM39_4285 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SM39_0080 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D SM39_3056 zipA; cell division protein involved in Z ring assembly K03528 zipA; cell division protein ZipA
D SM39_3518 zapA; hypothetical protein K09888 zapA; cell division protein ZapA
D SM39_4626 hypothetical protein K09892 zapB; cell division protein ZapB
D SM39_1195 hypothetical protein K18657 zapC; cell division protein ZapC
D SM39_0087 hypothetical protein K18778 zapD; cell division protein ZapD
D SM39_3807 putative ATPase K06916 zapE; cell division protein ZapE
D SM39_4732 hypothetical protein K07269 ytfB; cell division protein YtfB
D SM39_3075 amiA; probable N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_4707 amiB; N-acetylmuramoyl-L-alanine amidase II K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_3414 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_2708 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SM39_0449 sdeX; multidrug efflux pump SdeX K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_1922 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_2228 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D SM39_2229 minD; membrane ATPase of the MinC-MinD-MinE system K03609 minD; septum site-determining protein MinD
D SM39_2230 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D SM39_1209 sulA; cell division inhibitor K13053 sulA; cell division inhibitor SulA
D SM39_4536 slmA; TetR-family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D SM39_0655 seqA; regulatory protein for replication initiation K03645 seqA; negative modulator of initiation of replication
D SM39_3867 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SM39_3866 mreC; cell wall structural complex MreBCD transmembrane component MreC K03570 mreC; rod shape-determining protein MreC
D SM39_3865 mreD; cell wall structural complex MreBCD transmembrane component MreD K03571 mreD; rod shape-determining protein MreD
D SM39_0616 mrdB; cell wall shape-determining protein K05837 rodA; rod shape determining protein RodA
D SM39_0815 hypothetical protein K03496 parA; chromosome partitioning protein
D SM39_pSMC1_53 putative partition protein, ParA-like K03496 parA; chromosome partitioning protein
D SM39_pSMC2_14 ParA-like partition protein K03496 parA; chromosome partitioning protein
D SM39_pSMC2_17 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SM39_3694 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM39_3699 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM39_4481 gidA; tRNA uridine 5-carboxymethylaminomethylmodification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SM39_4480 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SM39_4317 xerC; tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D SM39_3478 xerD; site-specific tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D SM39_1008 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SM39_0148 Fic protein family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SM39_3756 putative cell filamentation protein, Fic-like K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D SM39_4506 engB; ATP/GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:smar03400]
D SM39_2008 ogt; O6-methylguanine-DNA-alkyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SM39_0667 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SM39_3281 ung; uracil-DNA-glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SM39_3633 mutY; adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SM39_1700 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SM39_0085 mutT; nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM39_0869 putative NUDIX-family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM39_4459 putative NUDIX-family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SM39_4537 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SM39_0305 fused DNA-binding transcriptional dualregulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SM39_2648 oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D SM39_3729 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SM39_3157 putative adaptative response regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SM39_4421 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SM39_4542 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SM39_0676 nei; endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SM39_2188 xthA; exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SM39_2793 nfo; endonuclease IV with intrinsic 3'-5' exonuclease activity K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SM39_4213 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D SM39_3476 recJ; ssDNA exonuclease, 5' --> 3'-specific K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SM39_3055 ligA; DNA ligase, NAD(+)-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SM39_4505 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SM39_3896 uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC K03701 uvrA; excinuclease ABC subunit A
D SM39_0736 uvrB; excinuclease of nucleotide excision repair, DNA damage recognition component K03702 uvrB; excinuclease ABC subunit B
D SM39_1319 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SM39_1332 cho; excinuclease K05984 cho; excinuclease Cho [EC:3.1.25.-]
D SM39_4315 uvrD; DNA-dependent ATPase I and helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SM39_4230 rpoB; RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SM39_4229 rpoC; RNA polymerase, beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SM39_3970 rpoA; RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SM39_4526 rpoZ; RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SM39_1474 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SM39_0146 mutS; methyl-directed mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D SM39_4708 mutL; methyl-directed mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SM39_3429 mutH; methyl-directed mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D SM39_2775 sbcB; exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SM39_3202 xseA; exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SM39_0384 xseB; exonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SM39_0533 DNA exonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SM39_1409 exoX; exodeoxyribonuclease X K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D SM39_3373 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SM39_4445 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SM39_4832 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SM39_0621 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SM39_1382 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SM39_0194 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SM39_0456 dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SM39_4987 holD; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D SM39_0557 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_1414 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_2774 DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_4053 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_0227 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_3417 recB; exonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SM39_3419 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SM39_3416 recD; exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SM39_0160 recA; DNA strand exchange and recombination protein with protease and nuclease activity K03553 recA; recombination protein RecA
D SM39_pSMC2_72 DNA recombinase A K03553 recA; recombination protein RecA
D SM39_2251 ruvA; component of RuvABC resolvasome, regulatory subunit K03550 ruvA; holliday junction DNA helicase RuvA
D SM39_2250 ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SM39_2252 ruvC; component of RuvABC resolvasome, endonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SM39_4633 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SM39_4728 priB; primosomal protein N K02686 priB; primosomal replication protein N
D SM39_0453 priC; primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D SM39_0356 sbcC; exonuclease, dsDNA, ATP-dependent K03546 sbcC; DNA repair protein SbcC/Rad50
D SM39_0357 sbcD; exonuclease, dsDNA, ATP-dependent K03547 sbcD; DNA repair protein SbcD/Mre11
D SM39_5004 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D SM39_4444 recF; gap repair protein K03629 recF; DNA replication and repair protein RecF
D SM39_4523 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SM39_3265 recO; gap repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D SM39_0458 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SM39_3284 recN; recombination and repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D SM39_0351 rdgC; DNA-binding protein, non-specific K03554 rdgC; recombination associated protein RdgC
D SM39_2821 putative helicase K19789 radD; DNA repair protein RadD
D SM39_4032 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SM39_2866 gyrA; DNA gyrase type II topoisomerase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SM39_4443 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SM39_2106 topA; DNA topoisomerase I, omega subunit K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SM39_4211 hupA; HU, DNA-binding transcriptional regulator, alpha subunit K05787 hupA; DNA-binding protein HU-alpha
D SM39_0405 hupB; HU, DNA-binding transcriptional regulator, beta subunit K03530 hupB; DNA-binding protein HU-beta
D SM39_3879 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SM39_1609 ihfA; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D SM39_1164 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SM39_4308 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SM39_2179 hns; global DNA-binding transcriptional dualregulator H-NS K03746 hns; DNA-binding protein H-NS
D SM39_2690 DNA-binding protein, H-NS-like K03746 hns; DNA-binding protein H-NS
D SM39_0267 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SM39_2509 umuC; UmuC protein K03502 umuC; DNA polymerase V
D SM39_pSMC2_70 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V
D SM39_2519 putative DNA polymerase V, subunit D K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SM39_pSMC2_71 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SM39_3913 lexA; DNA-binding transcriptional repressor of SOS regulon K01356 lexA; repressor LexA [EC:3.4.21.88]
D SM39_0045 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D SM39_1365 dinI; DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D SM39_0161 recX; regulatory protein for RecA K03565 recX; regulatory protein
D SM39_4345 rep; ATP-dependent DNA helicase K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D SM39_1213 helD; helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D SM39_2235 probable ATP-dependent helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SM39_0898 dinG; ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SM39_2868 nrdA; ribonucleoside diphosphate reductase 1, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_3325 nrdE; ribonucleoside-diphosphate reductase 2, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SM39_2869 nrdB; ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SM39_3326 nrdF; ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:smar03029]
D SM39_4773 infB; fused protein chain initiation factor 2, IF2:membrane protein/conserved protein K02519 infB; translation initiation factor IF-2
D SM39_1604 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SM39_3387 tsf; protein chain elongation factor EF-Ts K02357 tsf; elongation factor Ts
D SM39_4237 elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_4000 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_4001 fusA; elongation factor G K02355 fusA; elongation factor G
D SM39_1972 protein chain elongation factor EF-G, GTP-binding K02355 fusA; elongation factor G
D SM39_3266 era; membrane-associated, 16S rRNA-binding GTPase K03595 era; GTPase
D SM39_1683 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SM39_0623 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SM39_2255 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SM39_2268 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SM39_3500 putative amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SM39_1283 nuclease K01173 ENDOG; endonuclease G, mitochondrial
D SM39_3895 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SM39_3380 bamA; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D SM39_0011 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D SM39_3282 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D SM39_4686 groEL; chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM39_4685 groES; chaperone K04078 groES; chaperonin GroES
D SM39_0012 dnaJ; chaperone Hsp40, co-chaperone with DnaK K03686 dnaJ; molecular chaperone DnaJ
D SM39_3228 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SM39_3225 hscB; DnaJ-like molecular chaperone specific for IscU K04082 hscB; molecular chaperone HscB
D SM39_1663 grxD; probable monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D SM39_1008 mrp; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SM39_0392 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SM39_4452 oxaA; putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smar02000]
D SM39_1166 msbA; fused lipid transporter subunits of ABC superfamily: membrane component/ATP-binding component K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SM39_0414 smdA; multidrug efflux pump SmdA K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM39_0415 smdB; multidrug efflux pump SmdB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SM39_1756 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_1782 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_3462 ABC transporter, ATP-binding/permease protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D SM39_4891 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SM39_0343 hasD; heme acquisition ABC transporter, ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_1032 type I secretion system ATPase LipB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_1142 cydC; ABC transporter, ATP-binding/permease protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SM39_1143 cydD; ABC transporter, ATP-binding/permease protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SM39_1135 macB; macrolide-specific ABC transporter, ATP-binding/permease protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SM39_1330 etsB; ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SM39_3446 ABC transporter, ATP-binding protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D SM39_1198 uup; ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D SM39_3069 cysP; thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D SM39_4616 sbp; sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D SM39_3068 cysU; sulfate/thiosulfate transporter subunit K02046 cysU; sulfate/thiosulfate transport system permease protein
D SM39_3067 cysW; sulphate ABC transporter, permease protein K02047 cysW; sulfate/thiosulfate transport system permease protein
D SM39_3066 cysA; sulfate/thiosulfate transporter subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D SM39_0807 putative exported protein K02020 modA; molybdate transport system substrate-binding protein
D SM39_0721 modA; molybdate transporter subunit K02020 modA; molybdate transport system substrate-binding protein
D SM39_2736 putative exported protein K02020 modA; molybdate transport system substrate-binding protein
D SM39_0722 modB; molybdate transporter subunit K02018 modB; molybdate transport system permease protein
D SM39_0723 modC; molybdate transporter subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SM39_0713 modF; fused molybdate transporter subunits of ABC superfamily: ATP-binding components K05776 modF; molybdate transport system ATP-binding protein
D SM39_1878 nitrate-binding proteint K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D SM39_1879 putative nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D SM39_1880 putative nitrate ABC transporter K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D SM39_4021 tauA; taurine transporter subunit K15551 tauA; taurine transport system substrate-binding protein
D SM39_4019 tauC; taurine ABC transporter, permease protein K15552 tauC; taurine transport system permease protein
D SM39_4020 tauB; taurine ABC transporter, ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D SM39_1192 ssuA; putative aliphatic sulfonates ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SM39_1190 ssuC; putative aliphatic sulfonates ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SM39_1189 ssuB; alkanesulfonate transporter subunit K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SM39_3544 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_0757 putative ferric ABC transporter, solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_1967 fbpA; iron(III) ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SM39_3543 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_0756 putative ferric ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_1968 fbpB; iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SM39_3542 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_0755 afcU; predicted ferric transporter subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_1969 fbpC; iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SM39_0051 tbpA; thiamin transporter subunit K02064 thiB; thiamine transport system substrate-binding protein
D SM39_0050 thiP; fused thiamin transporter subunits of ABC superfamily: membrane components K02063 thiP; thiamine transport system permease protein
D SM39_0049 thiQ; thiamin transporter subunit K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D SM39_1481 potD; polyamine transporter subunit K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SM39_1485 potC; polyamine transporter subunit K11070 potC; spermidine/putrescine transport system permease protein
D SM39_1486 potB; spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D SM39_1487 potA; polyamine transporter subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SM39_1105 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily K11073 potF; putrescine transport system substrate-binding protein
D SM39_1108 potI; putrescine ABC transporter, permease protein K11074 potI; putrescine transport system permease protein
D SM39_1107 potH; putrescine transporter subunit: membrane component of ABC superfamily K11075 potH; putrescine transport system permease protein
D SM39_1106 potG; putrescine transporter subunit: ATP-binding component of ABC superfamily K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SM39_3943 putative ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SM39_3244 ABC transporter, substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D SM39_3940 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SM39_3241 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D SM39_3941 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SM39_3242 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D SM39_3939 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SM39_3243 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D SM39_1579 phnS; 2-aminoethylphosphonate ABC transporter, substrate-binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D SM39_1576 phnV; putative 2-aminoethylphosphonate ABC transporter, permease protein K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D SM39_1577 phnU; putative 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D SM39_1578 phnT; 2-aminoethylphosphonate ABC transporter, ATP-binding protein K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D SM39_3336 proX; glycine betaine transporter subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SM39_3335 proW; glycine betaine transporter subunit K02001 proW; glycine betaine/proline transport system permease protein
D SM39_3334 proV; glycine betaine transporter subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SM39_0880 predicted transporter subunit: periplasmic-binding component of ABC superfamily K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM39_1743 putative glycine betaine/carnitine/choline ABC transporter, substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SM39_0881 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_0883 ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_1742 putative glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_1744 putative glycine betaine/carnitine/choline ABC transporter, permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SM39_0882 ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM39_1741 putative glycine betaine/carnitine/choline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SM39_2624 ABC transporter, substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D SM39_2623 ABC transporter, permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D SM39_2622 ABC transporter, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D SM39_4905 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D SM39_4902 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SM39_4904 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D SM39_3926 malE; maltose transporter subunit K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D SM39_3927 malF; maltose transport system permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D SM39_3928 malG; maltose transport system permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D SM39_3924 malK; maltose/maltodextrin import ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM39_0997 mglB; methyl-galactoside transporter subunit K10540 mglB; methyl-galactoside transport system substrate-binding protein
D SM39_0999 mglC; methyl-galactoside transporter subunit K10541 mglC; methyl-galactoside transport system permease protein
D SM39_0998 mglA; fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D SM39_2763 putative ribose ABC transporter, substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SM39_4494 rbsB; D-ribose transporter subunit K10439 rbsB; ribose transport system substrate-binding protein
D SM39_2761 putative ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D SM39_4493 rbsC; ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D SM39_2762 putative ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SM39_4492 rbsA; ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D SM39_2097 sugar ABC transporter, substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein
D SM39_2094 sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D SM39_2095 sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D SM39_2162 putative sugar ABC transporter, substrate-binding protein K17205 xltC; putative xylitol transport system substrate-binding protein
D SM39_2161 putative sugar ABC transporter, permease protein K17206 xltB; putative xylitol transport system permease protein
D SM39_2160 putative sugar ABC transporter, ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D SM39_1431 ABC transporter, substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D SM39_1434 ABC transporter, substrate-binding protein K17213 K17213; inositol transport system substrate-binding protein
D SM39_1433 ABC transporter, permease protein K17214 K17214; inositol transport system permease protein
D SM39_1432 ABC transporter, ATP-binding protein K17215 K17215; inositol transport system ATP-binding protein
D SM39_4274 ugpB; glycerol-3-phosphate transporter subunit K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D SM39_4273 ugpA; sn-glycerol-3-phosphate ABC transporter, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D SM39_4272 ugpE; sn-glycerol-3-phosphate ABC transporter, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D SM39_4271 ugpC; sn-glycerol-3-phosphate ABC transporter, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D SM39_4135 putative membrane protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SM39_4136 ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SM39_3815 mammalian cell entry domain-containing protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SM39_3816 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SM39_3817 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SM39_3814 putative toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SM39_3813 putative anti-sigma factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D SM39_1006 putative substrate-binding transport protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D SM39_3496 putative sugar ABC transporter, substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D SM39_4164 ABC transporter, substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D SM39_4166 ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D SM39_4167 ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D SM39_3493 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D SM39_3494 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D SM39_2783 ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D SM39_4165 ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM39_3495 putative sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM39_2782 ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SM39_4468 pstS; phosphate transporter subunit K02040 pstS; phosphate transport system substrate-binding protein
D SM39_0360 putative phosphate binding ABC-transport protein K02040 pstS; phosphate transport system substrate-binding protein
D SM39_4467 pstC; phosphate transporter subunit K02037 pstC; phosphate transport system permease protein
D SM39_3150 putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D SM39_4466 pstA; phosphate transporter subunit K02038 pstA; phosphate transport system permease protein
D SM39_3149 putative phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D SM39_4465 pstB; phosphate transporter subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM39_3148 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SM39_0846 ABC transporter, substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D SM39_0847 ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D SM39_0848 ABC transporter, permease protein K02042 phnE; phosphonate transport system permease protein
D SM39_0845 ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D SM39_0797 putative extracellular solute-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D SM39_2926 hisM; histidine ABC transporter, permease protein K10015 hisM; histidine transport system permease protein
D SM39_2927 hisQ; histidine ABC transporter, permease protein K10016 hisQ; histidine transport system permease protein
D SM39_2925 hisP; histidine ABC transporter, ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_2928 hisJ; histidine ABC transporter, substrate-binding protein K10014 hisJ; histidine transport system substrate-binding protein
D SM39_2767 lysine/arginine/ornithine transporter subunit K10014 hisJ; histidine transport system substrate-binding protein
D SM39_0920 glnH; glutamine transporter subunit K10036 glnH; glutamine transport system substrate-binding protein
D SM39_0919 glnP; glutamine transporter subunit K10037 glnP; glutamine transport system permease protein
D SM39_0918 glnQ; glutamine transporter subunit K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_1113 artJ; arginine transporter subunit K09996 artJ; arginine transport system substrate-binding protein
D SM39_1116 artI; arginine transporter subunit K09997 artI; arginine transport system substrate-binding protein
D SM39_1114 artM; arginine transporter subunit K09998 artM; arginine transport system permease protein
D SM39_1115 artQ; arginine transporter subunit K09999 artQ; arginine transport system permease protein
D SM39_1117 artP; arginine transporter subunit K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_0632 gltI; glutamate and aspartate transporter subunit K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D SM39_0630 gltK; glutamate and aspartate transporter subunit K10002 gltK; glutamate/aspartate transport system permease protein
D SM39_0631 gltJ; glutamate and aspartate transporter subunit K10003 gltJ; glutamate/aspartate transport system permease protein
D SM39_0629 gltL; glutamate and aspartate transporter subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D SM39_2392 fliY; cystine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM39_2391 cystine ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SM39_2390 cystine ABC-transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SM39_4280 livK; leucine/isoleucine/valine transporter subunit K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_1985 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_2730 ABC transporter, substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SM39_4279 livH1; leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_1981 ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SM39_2729 leucine/isoleucine/valine transporter subunit K01997 livH; branched-chain amino acid transport system permease protein
D SM39_4278 livM1; leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_1982 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SM39_2728 leucine/isoleucine/valine transporter subunit K01998 livM; branched-chain amino acid transport system permease protein
D SM39_4277 livG1; leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_1983 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_2727 leucine/isoleucine/valine transporter subunit K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SM39_4276 livF1; leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_1984 ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_2726 leucine/isoleucine/valine transporter subunit K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SM39_1440 putative amino acid ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0836 putative ABC transporter, substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_3354 metQ; D-methionine ABC transporter, substrate-binding lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0781 nlpA; cytoplasmic membrane lipoprotein-28 K02073 metQ; D-methionine transport system substrate-binding protein
D SM39_0837 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D SM39_3353 metI; D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D SM39_0838 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM39_3352 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SM39_0854 putative ABC transporter, substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D SM39_0855 ABC transporter, permease protein K11960 urtB; urea transport system permease protein
D SM39_0856 ABC transporter, permease protein K11961 urtC; urea transport system permease protein
D SM39_0857 ABC transporter, ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D SM39_0858 ABC transporter, ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D SM39_0734 putative ABC transporter, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D SM39_0135 ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SM39_4463 ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SM39_2625 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SM39_1390 putative ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SM39_1841 ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SM39_4461 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SM39_4462 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SM39_0600 ABC transporter, membrane permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D SM39_0134 ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SM39_0133 glutamine transporter subunit K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SM39_2044 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_1964 putative oligopeptide transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2173 oppA; oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2174 oligopeptide ABC transporter, substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D SM39_2172 oppB; oligopeptide transporter subunit K15581 oppB; oligopeptide transport system permease protein
D SM39_2171 oppC; oligopeptide transporter subunit K15582 oppC; oligopeptide transport system permease protein
D SM39_2170 oppD; oligopeptide transporter subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D SM39_2169 oppF; oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D SM39_4363 dppA; dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_3044 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_0296 dipeptide transporter K12368 dppA; dipeptide transport system substrate-binding protein
D SM39_4362 dppB; dipeptide transporter K12369 dppB; dipeptide transport system permease protein
D SM39_4361 dppC; dipeptide transporter K12370 dppC; dipeptide transport system permease protein
D SM39_4360 dppD; dipeptide ABC transporter, ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D SM39_4359 dppF; dipeptide ABC transporter, ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D SM39_2060 sapA; predicted antimicrobial peptide transporter subunit K19226 sapA; cationic peptide transport system substrate-binding protein
D SM39_2061 sapB; peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D SM39_2062 sapC; peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D SM39_2063 sapD; peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D SM39_2064 sapF; predicted antimicrobial peptide transporter subunit K19230 sapF; cationic peptide transport system ATP-binding protein
D SM39_0985 gsiB; predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily K13889 gsiB; glutathione transport system substrate-binding protein
D SM39_0986 gsiC; ABC transporter, permease protein K13890 gsiC; glutathione transport system permease protein
D SM39_0987 gsiD; predicted peptide transporter subunit: membrane component of ABC superfamily K13891 gsiD; glutathione transport system permease protein
D SM39_0984 gsiA; ABC transporter, ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D SM39_2365 ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_2370 ABC transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_4825 putative extracellular substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SM39_2369 ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SM39_2368 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SM39_2367 ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SM39_2366 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SM39_2812 ABC transporter, substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D SM39_2813 ABC transporter, permease protein K13894 yejB; microcin C transport system permease protein
D SM39_2816 ABC transporter, ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D SM39_3572 fhuD; ferrichrome ABC transporter, substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D SM39_3571 fhuB; ferrichrome ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D SM39_3573 fhuC; ferrichrome ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D SM39_1629 hmuT; hemin ABC transporter, substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein
D SM39_1628 hmuU; hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D SM39_1627 hmuV; hemin ABC transporter, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D SM39_3038 fepB; ferric siderophore ABC transporter, substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D SM39_3039 fepD; ferric siderophore ABC transporter, permease protein K23186 fepD; iron-siderophore transport system permease protein
D SM39_3040 fepG; ferric siderophore ABC transporter, permease protein K23187 fepG; iron-siderophore transport system permease protein
D SM39_3041 fepC; ferric siderophore ABC transporter, ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D SM39_0804 ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_2705 ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_2785 putative ferric siderophore ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_3663 putative iron transporter K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_0332 putative solute-binding periplasmic protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_0716 putative iron transport protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_1599 putative substrate-binding transport protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_0789 ABC transporter, substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SM39_0805 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SM39_2704 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SM39_2787 putative ferric siderophore ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SM39_0718 putative iron transport protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SM39_0790 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SM39_0806 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM39_0719 putative iron ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM39_2786 putative ferric siderophore ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM39_0788 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM39_2703 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SM39_0101 btuF; vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily K06858 btuF; vitamin B12 transport system substrate-binding protein
D SM39_1612 btuC; vitamin B12 transport system permease K06073 btuC; vitamin B12 transport system permease protein
D SM39_1614 btuD; vitamin B12 ABC transporter, ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D SM39_2247 znuA; zinc transporter subunit: periplasmic-binding component of ABC superfamily K09815 znuA; zinc transport system substrate-binding protein
D SM39_2249 znuB; high-affinity zinc uptake ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D SM39_2248 znuC; zinc transporter subunit: ATP-binding component of ABC superfamily K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SM39_1592 chelated iron ABC transporter, substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D SM39_1590 chelated iron ABC transporter, permease protein K11605 sitC; manganese/iron transport system permease protein
D SM39_1589 chelated iron ABC transporter, permease protein K11606 sitD; manganese/iron transport system permease protein
D SM39_1591 chelated iron ABC transporter, ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein
D SM39_0445 ABC transporter, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D SM39_0444 ABC transporter, permease protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D SM39_0443 ABC transporter, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D SM39_1039 wzm; O-antigen ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D SM39_1040 wzt; O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SM39_2750 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D SM39_4834 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D SM39_2751 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D SM39_4835 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D SM39_3824 lptB; ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SM39_0746 predicted transporter subunit: membrane component of ABC superfamily K25180 ybhR; drug efflux transport system permease protein
D SM39_0747 predicted transporter subunit: membrane component of ABC superfamily K25181 ybhS; drug efflux transport system permease protein
D SM39_0748 fused predicted transporter subunits of ABC superfamily: ATP-binding components K25182 ybhF; drug efflux transport system ATP-binding protein
D SM39_0749 predicted membrane fusion protein component of efflux pump, membrane anchor K25183 ybhG; membrane fusion protein YbhG
D SM39_1476 lolC; lipoprotein-releasing ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SM39_1478 lolE; lipoprotein-releasing ABC transporter, permease protein K09808 lolC_E; lipoprotein-releasing system permease protein
D SM39_1477 lolD; lipoprotein-releasing ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SM39_2985 ccmD; cytochrome C biogenesis protein CcmD K02196 ccmD; heme exporter protein D
D SM39_2986 ccmC; heme exporter protein C K02195 ccmC; heme exporter protein C
D SM39_2987 ccmB; cytochrome C biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D SM39_2988 ccmA; cytochrome C biogenesis protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SM39_4285 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SM39_4286 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SM39_4784 putative component of multidrug efflux pump K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM39_4785 putative component of multidrug efflux pump K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM39_3593 ABC transporter, integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SM39_3594 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SM39_0506 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SM39_0505 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SM39_1644 sufC; ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SM39_1711 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SM39_3053 putative sodium bile acid symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SM39_1653 mdtK; multidrug efflux protein K26939 norM; MATE family, multidrug efflux pump
D SM39_3912 dinF; putative DNA-damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D SM39_2598 multidrug efflux protein K26937 dinF; MATE family, multidrug efflux pump
D SM39_0507 galP; D-galactose transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter
D SM39_4133 sugar transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor
D SM39_1549 putative sugar transporter K02532 lacY; MFS transporter, OHS family, lactose permease
D SM39_4977 major facilitator superfamily protein K02429 fucP; MFS transporter, FHS family, L-fucose permease
D SM39_4840 putative fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D SM39_2800 setB; sugar efflux transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D SM39_0054 setA; broad specificity sugar efflux system K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D SM39_3689 xapB; xanthosine permease K11537 xapB; MFS transporter, NHS family, xanthosine permease
D SM39_2735 citrate-proton symporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter
D SM39_3350 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D SM39_1328 proP; proline/glycine betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SM39_0009 major facilitator superfamily protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SM39_3919 major facilitator superfamily protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D SM39_3017 major facilitator superfamily protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D SM39_4203 major facilitator superfamily protein K08178 JEN; MFS transporter, SHS family, lactate transporter
D SM39_3204 putative sugar transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SM39_3775 exuT; hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D SM39_4965 hpaX; putative 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D SM39_1291 major facilitator superfamily protein K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D SM39_2614 putative 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SM39_0117 major facilitator superfamily protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SM39_3530 major facilitator superfamily protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SM39_1937 4-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SM39_2830 mhbT; putative N-hydroxybenzoate transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D SM39_4383 cynX; predicted cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SM39_3235 hcaT; putative 3-phenylpropionate permease K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D SM39_4302 glpT; sn-glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D SM39_4366 uhpC; membrane protein regulates uhpT expression K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D SM39_2360 narK; nitrate/nitrite transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D SM39_3433 lplT; predicted inner membrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D SM39_4671 entS; enterobactin exporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D SM39_1904 predicted transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D SM39_0397 ampG; muropeptide transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SM39_0274 putative drug resistance transporter, multidrug efflux system K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_2215 major facilitator superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_0606 major facilitator superfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_2819 bcr; bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_4622 emrD; multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D SM39_2722 sugar efflux transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D SM39_4391 mdfA; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D SM39_1351 mdtG; multidrug resistance protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_1810 putative multidrug resistance protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_2273 mdtH; multidrug resistance protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D SM39_4379 major facilitator superfamily protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SM39_3344 emrB; multidrug efflux system protein EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_2164 smfY; multidrug efflux pump K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_1574 major facilitator superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_2707 major facilitator superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_3165 mdtD; multidrug efflux system protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_0467 fsr; putative fosmidomycin efflux system protein Fsr K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D SM39_1734 major facilitator superfamily protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D SM39_1152 major facilitator superfamily protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D SM39_4042 tsgA; putative selenite- and tellurite-inducible protein K06141 tsgA; MFS transporter, TsgA protein
D SM39_1952 major facilitator superfamily protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D SM39_2721 major facilitator superfamily protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D SM39_3060 ptsI; PEP-protein phosphotransferase of PTS system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SM39_3427 ptsP; fused phosphoenolpyruvate-proteinphosphotransferase PtsP/GAF domain K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D SM39_3059 ptsH; PTS system phosphohistidinoprotein-hexosephosphotransferase subunit Hpr K02784 ptsH; phosphocarrier protein HPr
D SM39_3829 npr; phosphohistidinoprotein-hexosephosphotransferase component of N-regulated PTS system K08485 ptsO; phosphocarrier protein NPr
D SM39_2796 fruB; bifunctional PTS system fructose-specifictransporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D SM39_3061 crr; glucose-specific enzyme IIA component of PTS K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SM39_1384 ptsG; fused glucose-specific PTS enzymes: IIB component/IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D SM39_0646 nagE; fused N-acetyl glucosamine specific PTS enzyme: IIC, IIB , and IIA components K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SM39_1125 PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_1718 malX; maltose-specific PTS system, EIIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D SM39_3295 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3671 scrA; sucrose-specific PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_3259 PTS system, EIIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SM39_4375 bglF; beta-glucoside-specific PTS system, EIIABC components K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SM39_4886 ascF; fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component/IC component K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-]
D SM39_4816 treB; trehalose-specific PTS system, EIIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SM39_1484 PTS system, EIIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D SM39_2794 fruA; fused fructose-specific PTS enzymes: IIB component/IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SM39_4414 mtlA; fused mannitol-specific PTS enzymes: IIAcomponents/IIB components/IIC components K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SM39_4039 putative lactose/cellobiose-specific PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SM39_0153 chbB; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SM39_0154 chbC; N,N'-diacetylchitobiose-specific enzyme IIC component of PTS K02761 celB; cellobiose PTS system EIIC component
D SM39_3177 srlB; glucitol/sorbitol-specific enzyme IIA component of PTS K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SM39_3176 srlE; glucitol/sorbitol-specific enzyme IIB component of PTS K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SM39_3175 srlA; glucitol/sorbitol-specific enzyme IIC component of PTS K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SM39_2291 manX; fused mannose-specific PTS enzymes: IIAcomponent/IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SM39_2292 manY; mannose-specific enzyme IIC component of PTS K02795 manY; mannose PTS system EIIC component
D SM39_2293 manZ; mannose-specific enzyme IID component of PTS K02796 manZ; mannose PTS system EIID component
D SM39_3447 agaF; putative N-acetylgalactosamine-specific PTS system, IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SM39_3450 agaV; N-acetylgalactosamine-specific enzyme IIB component of PTS K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D SM39_3449 agaW; putative N-acetylgalactosamine-specific PTS system, IIC component K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D SM39_3448 agaE; putative N-acetylgalactosamine-specific PTS system, IID component K02747 agaE; N-acetylgalactosamine PTS system EIID component
D SM39_2918 PTS system, EIIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_4091 ulaC; L-ascorbate-specific enzyme IIA component of PTS K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SM39_2917 PTS system, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_4092 ulaB; L-ascorbate-specific enzyme IIB component of PTS K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SM39_2916 putative PTS system, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D SM39_4093 ulaA; L-ascorbate-specific enzyme IIC component of PTS K03475 ulaA; ascorbate PTS system EIIC component
D SM39_3827 ptsN; sugar-specific enzyme IIA component of PTS K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SM39_3707 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SM39_0327 aqpZ; aquaporin K06188 aqpZ; aquaporin Z
D SM39_4625 glpF; glycerol facilitator K02440 glpF; glycerol uptake facilitator
D SM39_0417 amtB; ammonium transporter K03320 amt; ammonium transporter, Amt family
D SM39_1685 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_2572 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_0872 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_3891 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_3760 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_1066 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SM39_3803 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D SM39_1268 putative membrane protein K19416 yccA; modulator of FtsH protease
D SM39_1155 focA; formate transporter K06212 focA; formate transporter
D SM39_3035 putative formate transporter K21993 fdhC; formate transporter
D SM39_4048 nirC; nitrite transporter K02598 nirC; nitrite transporter
D SM39_3965 mscL; mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SM39_1955 putative mechanosensitive ion channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D SM39_4700 putative mechanosensitive ion channel protein K22051 mscM; miniconductance mechanosensitive channel
D SM39_3531 mscS; mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D SM39_0917 putative mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D SM39_0364 putative mechanosensitive ion channel protein K16053 ybdG; miniconductance mechanosensitive channel
D SM39_3154 putative divalent cation transporter K06213 mgtE; magnesium transporter
D SM39_1962 putative Mg(2+) transporter K06213 mgtE; magnesium transporter
D SM39_2454 motA; chemotaxis protein MotA, motility protein A K02556 motA; chemotaxis protein MotA
D SM39_2453 motB; chemotaxis protein MotB, motility protein B K02557 motB; chemotaxis protein MotB
D SM39_4934 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D SM39_3675 exbB; membrane spanning protein in TonB-ExbB-ExbD complex K03561 exbB; biopolymer transport protein ExbB
D SM39_4931 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D SM39_3674 exbD; membrane spanning protein in TonB-ExbB-ExbD complex K03559 exbD; biopolymer transport protein ExbD
D SM39_0692 tolQ; membrane spanning protein in TolA-TolQ-TolR complex K03562 tolQ; biopolymer transport protein TolQ
D SM39_0693 tolR; membrane spanning protein in TolA-TolQ-TolR complex K03560 tolR; biopolymer transport protein TolR
D SM39_4312 corA; magnesium/nickel/cobalt transporter K03284 corA; magnesium transporter
D SM39_1063 putative Mg(2+) transporter K03284 corA; magnesium transporter
D SM39_2040 zntB; zinc transport protein K16074 zntB; zinc transporter
D SM39_1990 putative cation transporter K16074 zntB; zinc transporter
D SM39_0608 crcB; predicted inner membrane protein associated with chromosome condensation K06199 crcB; fluoride exporter
D SM39_2521 putative membrane protein K08994 yneE; ion channel-forming bestrophin family protein
D SM39_pSMC1_12 merT; mercuric ion transport protein K08363 merT; mercuric ion transport protein
D SM39_pSMC1_11 merP; putative periplasmic mercuric ion binding protein K08364 merP; periplasmic mercuric ion binding protein
D SM39_pSMC1_08 merE; putative mercury resistance protein K19059 merE; mercuric ion transport protein
D SM39_4739 putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM39_0168 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM39_1184 ompF; outer membrane pore protein N, non-specific K09476 ompF; outer membrane pore protein F
D SM39_2709 outer membrane pore protein K11929 phoE; outer membrane pore protein E
D SM39_0894 outer membrane pore protein K11929 phoE; outer membrane pore protein E
D SM39_2860 ompC; outer membrane porin protein C K09475 ompC; outer membrane pore protein C
D SM39_3923 lamB; maltoporin K02024 lamB; maltoporin
D SM39_1208 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SM39_0926 ompX; outer membrane protein K11934 ompX; outer membrane protein X
D SM39_2978 fadL; long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein
D SM39_1536 tsx; nucleoside-specific channel-forming protein K05517 tsx; nucleoside-specific channel-forming protein
D SM39_1455 putative outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_1561 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_0964 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1275 putative fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_3032 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_4178 ssph2; extracellular serine protease SSP-h2 K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SM39_4179 ssph1; extracellular serine protease SSP-h1 K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SM39_4420 estA; lipase/esterase K12686 apeE; outer membrane lipase/esterase
D SM39_4667 fepA; iron-enterobactin outer membrane transporter K19611 fepA; ferric enterobactin receptor
D SM39_1751 fecA; ferric citrate outermembrane transporter K16091 fecA; Fe(3+) dicitrate transport protein
D SM39_3664 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D SM39_4654 btuB; vitamin B12 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D SM39_0342 hasA; hemophore HasA K12545 hasA; heme acquisition protein HasA
D SM39_0341 hasR; TonB-dependent heme receptor K16152 hasR; heme acquisition protein HasR
D SM39_4892 Fe(III)-pyochelin outer membrane receptor precursor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D SM39_2784 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SM39_3078 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SM39_1631 hmuR; TonB-dependent hemin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SM39_2513 putative TonB-dependent heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SM39_4933 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_2582 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_0715 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_0333 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_3117 putative TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_1900 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_1908 TonB-dependent ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_0195 iutA; TonB-dependent iron siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_3574 fhuA; ferrichrome outer membrane transporter K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_3043 TonB-dependent ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SM39_1034 type I secretion outer membrane protein LipD K12538 hasF; outer membrane protein, type I secretion system
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_1915 putative outer membrane efflux protein K19593 opmE; outer membrane protein, multidrug efflux system
D SM39_1920 multidrug efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SM39_1017 wza; lipoprotein required for capsular polysaccharide translocation through the outer membrane K01991 wza; polysaccharide biosynthesis/export protein
D SM39_2355 putative polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D SM39_4373 putative carbohydrate-selective porin K07267 oprB; porin
D SM39_3380 bamA; outer membrane protein assembly factor K07277 SAM50; outer membrane protein insertion porin family
D SM39_3212 bamB; protein assembly complex, lipoprotein component K17713 bamB; outer membrane protein assembly factor BamB
D SM39_3111 nlpB; putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D SM39_0183 predicted lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D SM39_3285 smpA; small membrane lipoprotein K06186 bamE; outer membrane protein assembly factor BamE
D SM39_4741 putative cell surface protein K07278 tamA; translocation and assembly module TamA
D SM39_4742 putative exported protein K09800 tamB; translocation and assembly module TamB
D SM39_3823 lptA; putative organic solvent tolerance protein K09774 lptA; lipopolysaccharide export system protein LptA
D SM39_3822 possible exported protein K11719 lptC; lipopolysaccharide export system protein LptC
D SM39_0041 imp; exported protein required for envelope biosynthesis and integrity K04744 lptD; LPS-assembly protein
D SM39_0622 rlpB; minor lipoprotein K03643 lptE; LPS-assembly lipoprotein
D SM39_4350 bcsC; cellulose synthase subunit BcsC K20543 bcsC; cellulose synthase operon protein C
D SM39_0634 corC; magnesium and cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein
D SM39_1004 putative membrane protein K06518 cidA; holin-like protein
D SM39_3886 putative membrane protein K06518 cidA; holin-like protein
D SM39_2789 lysP; lysine transporter K11733 lysP; lysine-specific permease
D SM39_2303 aromatic amino acid transporter K11734 aroP; aromatic amino acid transport protein AroP
D SM39_3608 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D SM39_0362 proY; predicted cryptic proline transporter K11736 proY; proline-specific permease ProY
D SM39_1289 cycA; D-serine/D-alanine/glycine permease K11737 cycA; D-serine/D-alanine/glycine transporter
D SM39_0767 ansP; L-asparagine transporter K11738 ansP; L-asparagine permease
D SM39_0114 amino acid permease K16234 hutT; histidine transporter
D SM39_3082 mmuP; probable S-methylmethionine permease K16235 mmuP; S-methylmethionine transporter
D SM39_1533 puuP; putrescine importer K14052 puuP; putrescine importer
D SM39_4792 potE; putrescine/proton symporter:putrescine/ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D SM39_3367 cadB; predicted lysine/cadaverine transporter K03757 cadB; cadaverine:lysine antiporter
D SM39_2014 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D SM39_0700 zitB; zinc efflux system K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SM39_4614 fieF; ferrous-iron efflux pump K13283 fieF; ferrous-iron efflux pump FieF
D SM39_1280 hypothetical protein K18305 mexG; transmembrane protein
D SM39_1282 multidrug efflux pump K18307 mexI; multidrug efflux pump
D SM39_1914 putative multidrug efflux transporter K19594 gesB; gold/copper resistance efflux pump
D SM39_0448 sdeY; multidrug efflux pump SdeY K18138 acrB; multidrug efflux pump
D SM39_1921 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D SM39_1958 aminoglycoside/multidrug efflux system K18138 acrB; multidrug efflux pump
D SM39_3100 acrD; aminoglycoside/multidrug efflux system K18324 acrD; multidrug efflux pump
D SM39_1400 sdeB; multidrug efflux pump K19585 oqxB; multidrug efflux pump
D SM39_3163 mdtB; multidrug efflux pump K07788 mdtB; multidrug efflux pump
D SM39_3164 mdtC; multidrug efflux pump K07789 mdtC; multidrug efflux pump
D SM39_2035 putative multidrug resistance protein K03297 emrE; small multidrug resistance pump
D SM39_pSMC1_35 multidrug efflux protein, putative ethidium bromide resistance protein K18975 ebr; small multidrug resistance pump
D SM39_pSMC1_46 multidrug efflux protein, putative ethidium bromide resistance protein K18975 ebr; small multidrug resistance pump
D SM39_4693 sugE; multidrug efflux system protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SM39_2237 mdtI; multidrug resistance protein K11742 mdtI; spermidine export protein MdtI
D SM39_2238 mdtJ; multidrug resistance protein K11743 mdtJ; spermidine export protein MdtJ
D SM39_0821 cysteine and O-acetyl-L-serine efflux system K15268 eamA; O-acetylserine/cysteine efflux transporter
D SM39_0925 rhtA; threonine and homoserine efflux system K11939 rhtA; inner membrane transporter RhtA
D SM39_4311 rarD; predicted chloramphenical resistance permease K05786 rarD; chloramphenicol-sensitive protein RarD
D SM39_2649 putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D SM39_2630 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SM39_1620 arnE; subunit of ArnE/ArnF undecaprenyl-phosphate-alpha-L-Ara4N flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D SM39_1748 putative membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D SM39_4108 gntT; gluconate transporter, high-affinity Gnt I system K06155 gntT; Gnt-I system high-affinity gluconate transporter
D SM39_3948 gntU; low-affinity gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter
D SM39_0462 putative permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SM39_0930 putative permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SM39_4843 putative permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SM39_4681 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D SM39_1322 dcuB; anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D SM39_3455 putative lactate permease K03303 lutP; lactate permease
D SM39_3460 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D SM39_3472 putative choline transporter K02168 betT; choline/glycine/proline betaine transport protein
D SM39_0954 betT; choline transporter of high affinity K02168 betT; choline/glycine/proline betaine transport protein
D SM39_2378 chaA; calcium/sodium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D SM39_3819 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D SM39_4154 pitA; phosphate transporter, low-affinity K16322 pit; low-affinity inorganic phosphate transporter
D SM39_3876 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D SM39_2387 putP; proline:sodium symporter K11928 putP; sodium/proline symporter
D SM39_4656 actP; acetate permease K14393 actP; cation/acetate symporter
D SM39_4659 gltP; glutamate/aspartate:proton symporter K11102 gltP; proton glutamate symport protein
D SM39_4348 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D SM39_3772 sstT; putative sodium:dicarboxylate symporter K07862 sstT; serine/threonine transporter
D SM39_4522 gltS; glutamate transporter K03312 gltS; glutamate:Na+ symporter, ESS family
D SM39_0013 nhaA; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D SM39_2222 nhaB; sodium:proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D SM39_4011 putative Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D SM39_2642 putative Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SM39_3888 putative sodium/hydrogen exchanger family protein K24163 nhaK; monovalent cation/hydrogen antiporter
D SM39_1336 cvrA; predicted cation/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D SM39_0030 kefC; potassium:proton antiporter K11745 kefC; glutathione-regulated potassium-efflux system protein KefC
D SM39_0029 kefF; flavoprotein subunit for the KefC potassium efflux system K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF
D SM39_4015 kefB; potassium:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SM39_4159 glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SM39_4016 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D SM39_0466 rosB; putative potassium antiporter K26735 KEA4_5_6; K+:H+ antiporter
D SM39_4243 trkH; Trk system potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D SM39_1284 potassium transporter subunit K03498 trkH; trk/ktr system potassium uptake protein
D SM39_3964 trkA; NAD-binding component of TrK potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D SM39_3658 permease K10974 codB; cytosine permease
D SM39_1855 putative permease for cytosine/purines, uracil, thiamine, allantoin K23467 tgnP; trigonelline permease
D SM39_3134 uraA; uracil transporter K02824 uraA; uracil permease
D SM39_4521 putative purine permease K16345 xanP; xanthine permease XanP
D SM39_4458 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SM39_3889 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SM39_3027 nupC; nucleoside transporter, except guanosine K11535 nupC; nucleoside transport protein
D SM39_2874 tyrP; tyrosine-specific permease K03834 tyrP; tyrosine-specific transport protein
D SM39_2802 mtr; tryptophan-specific permease K03835 mtr; tryptophan-specific transport protein
D SM39_1598 putative serine transporter K03837 sdaC; serine transporter
D SM39_1086 sdaC; predicted serine transporter K03837 sdaC; serine transporter
D SM39_1695 putative benzoate transporter K05782 benE; benzoate membrane transport protein
D SM39_2656 citT; citrate: succinate antiporter K09477 citT; citrate:succinate antiporter
D SM39_0097 clcA; chloride channel, voltage-gated K03281 clcA; chloride channel protein, CIC family
D SM39_1740 predicted voltage-gated chloride channel K03281 clcA; chloride channel protein, CIC family
D SM39_3019 putative voltage gated chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SM39_1790 putative chromate transporter K07240 chrA; chromate transporter
D SM39_1791 putative chromate transporter K07240 chrA; chromate transporter
D SM39_1460 putative sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D SM39_1472 predicted transporter K03321 TC.SULP; sulfate permease, SulP family
D SM39_pSMC1_04 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SM39_1387 putative manganese transport protein K03322 mntH; manganese transport protein
D SM39_3026 mntH; manganese transport protein K03322 mntH; manganese transport protein
D SM39_3937 putative Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D SM39_1013 dcuC; anaerobic C4-dicarboxylate transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D SM39_4331 wzxE; O-antigen repeating unit flippase K16693 wzxE; enterobacterial common antigen flippase
D SM39_2269 mviN; innor membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D SM39_3209 putative transporter K13936 mdcF; malonate transporter and related proteins
D SM39_4269 putative transporter K13936 mdcF; malonate transporter and related proteins
D SM39_4488 kup; potassium transporter K03549 kup; KUP system potassium uptake protein
D SM39_1501 potassium transporter K03549 kup; KUP system potassium uptake protein
D SM39_3525 argO; arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SM39_4306 rhtB; neutral amino-acid efflux system K05834 rhtB; homoserine/homoserine lactone efflux protein
D SM39_4307 rhtC; threonine efflux protein K05835 rhtC; threonine efflux protein
D SM39_0031 LysE-type translocator K05835 rhtC; threonine efflux protein
D SM39_0304 neutral amino-acid efflux system K11250 leuE; leucine efflux protein
D SM39_3339 putative membrane protein K26605 azlC; branched chain amino acid efflux pump
D SM39_3340 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D SM39_2947 tctA; tricarboxylic transport protein K07793 tctA; putative tricarboxylic transport membrane protein
D SM39_2946 tctB; tricarboxylic transport protein K07794 tctB; putative tricarboxylic transport membrane protein
D SM39_2945 tctC; tricarboxylic transport protein K07795 tctC; putative tricarboxylic transport membrane protein
D SM39_3852 aaeB; p-hydroxybenzoic acid efflux pump K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D SM39_3115 perM; putative permease K03548 perM; putative permease
D SM39_4296 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D SM39_3660 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D SM39_1600 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D SM39_0074 ftsW; integral membrane protein involved instabilizing FstZ ring during cell division K03588 ftsW; cell division protein FtsW
D SM39_2295 putative membrane protein K23242 mntP; manganese efflux pump family protein
D SM39_2386 putative iron permease K07243 FTR; high-affinity iron transporter
D SM39_2385 efeO; ferrous iron transport periplasmic protein K07224 efeO; iron uptake system component EfeO
D SM39_2384 efeB; ferrous iron transport peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D SM39_3232 putative high-affinity nickel-transport protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D SM39_4899 putative carbon starvation protein K23676 btsT; pyruvate/proton symporter
D SM39_4932 TonB-like protein K03832 tonB; periplasmic protein TonB
D SM39_3080 cjrB; TonB-like protein K03832 tonB; periplasmic protein TonB
D SM39_0345 hasB; TonB-like protein K03832 tonB; periplasmic protein TonB
D SM39_2510 TonB-like protein K03832 tonB; periplasmic protein TonB
D SM39_2150 tonB; membrane spanning protein in TonB-ExbB-ExbD complex K03832 tonB; periplasmic protein TonB
D SM39_0696 pal; peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D SM39_0694 tolA; membrane anchored protein in TolA-TolQ-TolR complex K03646 tolA; colicin import membrane protein
D SM39_0695 tolB; periplasmic protein K03641 tolB; TolB protein
D SM39_2953 scsB; suppressor for copper-sensitivity B K08344 scsB; suppressor for copper-sensitivity B
D SM39_2346 narG; respiratory nitrate reductase 1 alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2345 narH; respiratory nitrate reductase 1 beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2343 narI; respiratory nitrate reductase 1 gamma chain K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SM39_2798 trimethylamine N-oxide reductase I, cytochrome C-type subunit K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D SM39_2799 bisC; biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D SM39_3436 putative molybdopterin-containing oxidoreductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D SM39_2832 ttrA; tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D SM39_2834 ttrB; tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D SM39_2833 ttrC; tetrathionate reductase subunit C K08359 ttrC; tetrathionate reductase subunit C
D SM39_3343 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D SM39_0344 hasE; heme acquisition ABC transporter, substrate-binding protein K12537 hasE; membrane fusion protein, type I secretion system
D SM39_1033 type I secretion membrane fusion protein LipC K12537 hasE; membrane fusion protein, type I secretion system
D SM39_1755 putative microcin H47 secretion protein K13408 cvaA; membrane fusion protein
D SM39_1781 putative microcin H47 secretion protein K13408 cvaA; membrane fusion protein
D SM39_1281 multidrug efflux pump K18306 mexH; membrane fusion protein, multidrug efflux system
D SM39_1913 putative multidrug efflux transporter K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D SM39_0449 sdeX; multidrug efflux pump SdeX K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_1922 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_0720 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D SM39_1401 sdeA; multidrug efflux pump K19586 oqxA; membrane fusion protein, multidrug efflux system
D SM39_3162 mdtA; multidrug efflux pump K07799 mdtA; membrane fusion protein, multidrug efflux system
D SM39_1134 macA; macrolide-specific ABC transporter, substrate-binding protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SM39_1331 etsA; putative multidrug efflux pump K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SM39_3853 aaeA; p-hydroxybenzoic acid efflux pump K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D SM39_2354 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_1019 wzc; tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D SM39_0699 pnuC; predicted nicotinamide mononucleotidetransporter K03811 pnuC; nicotinamide mononucleotide transporter
D SM39_4077 feoA; ferrous iron transporter, protein A K04758 feoA; ferrous iron transport protein A
D SM39_4078 feoB; fused ferrous iron transporter, protein B:GTP-binding protein/membrane protein K04759 feoB; ferrous iron transport protein B
D SM39_4079 feoC; predicted DNA-binding transcriptional regulator K07490 feoC; ferrous iron transport protein C
D SM39_4155 uspB; universal stress protein B K06144 uspB; universal stress protein B
D SM39_4691 ecnA; entericidin A K16347 ecnA; entericidin A
D SM39_4692 ecnB; entericidin B K16348 ecnB; entericidin B
D SM39_2983 ccmF; heme lyase, CcmF subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D SM39_4901 putative Mg(2+) transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SM39_2528 Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SM39_1418 putative copper resistance protein K07245 pcoD; copper resistance protein D
D SM39_1417 putative copper resistance protein K07156 copC; copper resistance protein C
D SM39_2203 mipA; MltA-interacting protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:smar02044]
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_0343 hasD; heme acquisition ABC transporter, ATP-binding/permease protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_1032 type I secretion system ATPase LipB K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D SM39_0344 hasE; heme acquisition ABC transporter, substrate-binding protein K12537 hasE; membrane fusion protein, type I secretion system
D SM39_1033 type I secretion membrane fusion protein LipC K12537 hasE; membrane fusion protein, type I secretion system
D SM39_1034 type I secretion outer membrane protein LipD K12538 hasF; outer membrane protein, type I secretion system
D SM39_1755 putative microcin H47 secretion protein K13408 cvaA; membrane fusion protein
D SM39_1781 putative microcin H47 secretion protein K13408 cvaA; membrane fusion protein
D SM39_1756 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_1782 putative ABC transporter protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SM39_0425 type II secretion pathway related protein K02452 gspC; general secretion pathway protein C
D SM39_0426 type II secretion pathway related protein K02453 gspD; general secretion pathway protein D
D SM39_0427 type II secretion pathway related protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SM39_0428 type II secretion pathway related protein K02455 gspF; general secretion pathway protein F
D SM39_0429 type II secretion pathway related protein K02456 gspG; general secretion pathway protein G
D SM39_0430 type II secretion pathway related protein K02457 gspH; general secretion pathway protein H
D SM39_0431 type II secretion pathway related protein K02458 gspI; general secretion pathway protein I
D SM39_0432 type II secretion pathway related protein K02459 gspJ; general secretion pathway protein J
D SM39_0433 type II secretion pathway related protein K02460 gspK; general secretion pathway protein K
D SM39_0434 type II secretion pathway related protein K02461 gspL; general secretion pathway protein L
D SM39_0435 type II secretion pathway related protein K02462 gspM; general secretion pathway protein M
D SM39_2599 putative protein secretion protein K02465 gspS; general secretion pathway protein S
D SM39_0437 type II secretion pathway related protein K02465 gspS; general secretion pathway protein S
D SM39_2364 type 4 prepilin-like protein leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_0436 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_3217 putative tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D SM39_3622 pilT; putative type II/IV secretion/tfp pilus assembly ATPase K02669 pilT; twitching motility protein PilT
D SM39_3423 ppdA; prepilin peptidase-dependent protein A K02679 ppdA; prepilin peptidase dependent protein A
D SM39_3422 ppdB; prepilin peptidase-dependent protein B K02680 ppdB; prepilin peptidase dependent protein B
D SM39_3420 ppdC; hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D SM39_0092 ppdD; predicted major pilin subunit K02682 ppdD; prepilin peptidase dependent protein D
D SM39_0091 hofB; conserved protein with nucleoside triphosphate hydrolase domain K02504 hofB; protein transport protein HofB
D SM39_0090 hofC; assembly protein in type IV pilin biogenesis, transmembrane protein K02505 hofC; protein transport protein HofC
D SM39_4060 putative type IV pilus assembly protein K12288 hofM; pilus assembly protein HofM
D SM39_4058A putative fimbrial assembly protein K12289 hofN; pilus assembly protein HofN
D SM39_4057A hypothetical protein K12291 hofP; pilus assembly protein HofP
D SM39_4057 hofQ; predicted fimbrial transporter K02507 hofQ; protein transport protein HofQ
D SM39_3625 putative membrane protein K02221 yggT; YggT family protein
D SM39_0407 putative exported protein K02237 comEA; competence protein ComEA
D SM39_1165 putative competence-related protein K02238 comEC; competence protein ComEC
D SM39_2441 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D SM39_2442 flhB; predicted flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D SM39_2406 fliF; flagellar basal-body MS-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SM39_2408 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D SM39_2409 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SM39_2414 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SM39_2415 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SM39_2416 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SM39_2417 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D SM39_2418 fliR; flagellar export pore protein K02421 fliR; flagellar biosynthesis protein FliR
D SM39_pSMC2_57 conjugal transfer mating pair stabilization protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D SM39_pSMC2_52 conjugal pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D SM39_pSMC2_51 conjugal transfer mating pair stabilization protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D SM39_pSMC2_50 conjugal transfer pilus assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D SM39_pSMC2_49 conjugal transfer pilus assembly protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D SM39_pSMC2_47 conjugal transfer pilus assembly protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D SM39_pSMC2_46 conjugative transfer system protein TrbI K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D SM39_pSMC2_45 conjugal transfer system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D SM39_pSMC2_44 conjugal transfer system protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D SM39_pSMC2_41 conjugal transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D SM39_pSMC2_40 conjugal transfer protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D SM39_pSMC2_39 conjugal transfer pilus assembly protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE
D SM39_pSMC2_38 conjugal transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D SM39_3477 dsbC; protein disulfide isomerase II K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SM39_pSMC2_56 conjugal transfer pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D SM39_pSMC1_18 trbJ; mating pair formation protein K20266 trbJ; type IV secretion system protein TrbJ
D SM39_pSMC1_20 putative conjugal transfer protein, TrbL-like K07344 trbL; type IV secretion system protein TrbL
D SM39_4178 ssph2; extracellular serine protease SSP-h2 K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SM39_4179 ssph1; extracellular serine protease SSP-h1 K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SM39_4420 estA; lipase/esterase K12686 apeE; outer membrane lipase/esterase
D SM39_3935 shlB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D SM39_3936 shlA; hemolysin K11016 shlA; hemolysin
D SM39_2474 type VI secretion system-associated protein, IcmF-like K11891 impL; type VI secretion system protein ImpL
D SM39_2473 type VI secretion system-associated protein K11892 impK; type VI secretion system protein ImpK
D SM39_2472 type VI secretion system-associated protein K11893 impJ; type VI secretion system protein ImpJ
D SM39_2492 type VI secretion system-associated protein K11895 impH; type VI secretion system protein ImpH
D SM39_2491 type VI secretion system-associated protein K11896 impG; type VI secretion system protein ImpG
D SM39_2490 type VI secretion system, lysozyme-related protein K11897 impF; type VI secretion system protein ImpF
D SM39_2478 type VI secretion system-associated protein K11900 impC; type VI secretion system protein ImpC
D SM39_2477 type VI secretion system-associated protein K11901 impB; type VI secretion system protein ImpB
D SM39_2476 type VI secretion system-associated protein K11902 impA; type VI secretion system protein ImpA
D SM39_2481 type VI secretion system, effector protein Hcp-like K11903 hcp; type VI secretion system secreted protein Hcp
D SM39_2462 type VI secretion system, effector protein VgrG-like K11904 vgrG; type VI secretion system secreted protein VgrG
D SM39_2495 type VI secretion system, effector protein VgrG-like K11904 vgrG; type VI secretion system secreted protein VgrG
D SM39_2471 type VI secretion system-associated protein, SciN-like K11906 vasD; type VI secretion system protein VasD
D SM39_2493 type VI secretion system ATPase, ClpV1-like K11907 vasG; type VI secretion system protein VasG
D SM39_2475 type VI secretion system-associated protein K11890 impM; type VI secretion system protein ImpM
D SM39_2489 type VI secretion system-associated protein, SciE-like K11898 impE; type VI secretion system protein ImpE
D SM39_1457 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_0962 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_1273 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_3030 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_1562 putative fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D SM39_1455 putative outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_1561 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_0964 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1275 putative fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_3032 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1565 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1564 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1560 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1563 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_3645 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D SM39_2593 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D SM39_1078 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D SM39_4141 fimbrial outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D SM39_3644 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D SM39_2592 fimbrial chaperone K12519 papD; chaperone protein PapD
D SM39_1079 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D SM39_4142 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D SM39_0944 matB; hypothetical protein K21964 ecpA; Mat/Ecp fimbriae major subunit
D SM39_0945 matC; predicted protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D SM39_0946 predicted aromatic compound dioxygenase K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D SM39_0947 predicted receptor K21967 ecpD; Mat/Ecp fimbriae adhesin
D SM39_0948 hypothetical protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone
D SM39_0084 secA; preprotein translocase subunit, ATPase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SM39_4565 secB; protein export chaperone K03071 secB; preprotein translocase subunit SecB
D SM39_0372 secD; SecYEG protein translocase auxillary subunit K03072 secD; preprotein translocase subunit SecD
D SM39_4236 secE; preprotein translocase membrane subunit K03073 secE; preprotein translocase subunit SecE
D SM39_0373 secF; SecYEG protein translocase auxillary subunit K03074 secF; preprotein translocase subunit SecF
D SM39_4770 secG; preprotein translocase membrane subunit K03075 secG; preprotein translocase subunit SecG
D SM39_0083 secM; regulator of secA translation K13301 secM; secretion monitor
D SM39_3975 secY; preprotein translocase membrane subunit K03076 secY; preprotein translocase subunit SecY
D SM39_0170 ffh; signal recognition particle component with 4.5S RNA ffs K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SM39_4287 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SM39_0371 SecYEG protein translocase auxiliary subunit K03210 yajC; preprotein translocase subunit YajC
D SM39_4452 oxaA; putative membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SM39_4256 tatA; TatABCE protein translocation system subunit K03116 tatA; sec-independent protein translocase protein TatA
D SM39_4255 tatB; TatABCE protein translocation system subunit K03117 tatB; sec-independent protein translocase protein TatB
D SM39_4254 tatC; TatABCE protein translocation system subunit K03118 tatC; sec-independent protein translocase protein TatC
D SM39_0610 tatE; TatABCE protein translocation system subunit K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:smar02042]
D SM39_4739 putative transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM39_0168 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SM39_3936 shlA; hemolysin K11016 shlA; hemolysin
D SM39_3935 shlB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D SM39_3488 putative hemolysin K11068 hlyIII; hemolysin III
D SM39_3662 putative phospholipase K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:smar02022]
D SM39_0359 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SM39_0358 phoB; transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SM39_1492 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SM39_1493 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SM39_4070 envZ; sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SM39_4071 ompR; two-component system response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SM39_2020 rstB; two-component sensor kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SM39_2019 rstA; two-component response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D SM39_4571 cpxA; two-component system sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D SM39_4572 cpxR; two-component system response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D SM39_3481 creC; two-component system sensor kinase K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SM39_3482 creB; two-component system response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SM39_3166 baeS; two-component system sensor kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SM39_3167 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SM39_4761 pmrB; two-component system sensor kinase K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D SM39_4762 pmrA; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D SM39_0277 putative two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0941 two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0276 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_0940 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_3587 qseC; two-component system sensor kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D SM39_3588 qseB; two-component system response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D SM39_0660 kdpD; fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SM39_0659 kdpE; DNA-binding response regulator in two-component regulatory system with KdpD K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SM39_3796 arcB; hybrid sensory histidine kinase in two-component regulatory system with ArcA K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SM39_5023 arcA; DNA-binding response regulator in two-component regulatory system with ArcB or CpxA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D SM39_2942 tctE; two-component system sensor kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SM39_2943 tctD; two-component system response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D SM39_3508 rssA; swarming motility regulation two-component system, sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SM39_3062 two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SM39_3063 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SM39_2361 narX; nitrate/nitrite sensor protein NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D SM39_2362 narL; transcriptional regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D SM39_3097 narQ; nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D SM39_3098 narP; DNA-binding response regulator NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D SM39_4367 uhpB; two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D SM39_4368 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D SM39_0760 two-component response regulator K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SM39_0761 putative N-acetyltransferase K20264 fusR; two-component system, NarL family, response regulator FusR
D SM39_2865 rcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SM39_2863 rcsD; phosphotransfer intermediate protein intwo-component regulatory system with RcsBC K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D SM39_2864 rcsB; transcriptional regulator RcsB K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SM39_1272 hypothetical protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SM39_0105 barA; hybrid sensory histidine kinase in two-component regulatory system with UvrY K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D SM39_1318 uvrY; two-component response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SM39_0701 bifunctional two-component sensor kinase and response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SM39_0702 two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D SM39_3332 two-component system sensor kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D SM39_3333 two-component response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D SM39_2663 citB; two-component response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB
D SM39_1429 ducS; sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D SM39_1428 ducR; DNA-binding response regulator in two-component regulatory system with DcuS K07703 dcuR; two-component system, CitB family, response regulator DcuR
D SM39_4036 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SM39_3014 two-component system sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SM39_4035 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D SM39_3015 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D SM39_4513 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SM39_4512 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SM39_3252 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D SM39_3250 sigma-54 dependent transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D SM39_2452 cheA; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SM39_2446 cheY; chemotaxis regulator transmitting signal to flagellar motor component K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SM39_2447 cheB; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SM39_2835 ttrS; two-component system sensor kinase for tetrathionate reductase complex K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D SM39_2836 ttrR; two-component response regulator of tetrathionate reductase complex K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D SM39_2183 response regulator of RpoS K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:smar02035]
D SM39_2452 cheA; fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SM39_2451 cheW; purine-binding chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SM39_2448 cheR; chemotaxis regulator, protein-glutamate methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SM39_2447 cheB; fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SM39_2446 cheY; chemotaxis regulator transmitting signal to flagellar motor component K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SM39_2445 cheZ; chemotaxis regulator, protein phosphatase for CheY K03414 cheZ; chemotaxis protein CheZ
D SM39_0916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SM39_1816 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_2450 tar; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4745 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D SM39_4406 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D SM39_4687 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_2449 tap; methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D SM39_2408 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D SM39_2409 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SM39_2410 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D SM39_2415 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SM39_2416 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SM39_2417 fliQ; flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ
D SM39_2418 fliR; flagellar export pore protein K02421 fliR; flagellar biosynthesis protein FliR
D SM39_2441 flhA; predicted flagellar export pore protein K02400 flhA; flagellar biosynthesis protein FlhA
D SM39_2442 flhB; predicted flagellar export pore protein K02401 flhB; flagellar biosynthesis protein FlhB
D SM39_2440 fhlE; flagellar protein K03516 flhE; flagellar protein FlhE
D SM39_2407 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D SM39_2413 fliM; flagellar motor switching and energizing component K02416 fliM; flagellar motor switch protein FliM
D SM39_2414 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SM39_2406 fliF; flagellar basal-body MS-ring and collar protein K02409 fliF; flagellar M-ring protein FliF
D SM39_2425 flgI; predicted flagellar basal body protein K02394 flgI; flagellar P-ring protein FlgI
D SM39_2433 flgA; assembly protein for flagellar basal-bodyperiplasmic P ring K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SM39_2426 flgH; flagellar protein of basal-body outer-membrane L ring K02393 flgH; flagellar L-ring protein FlgH
D SM39_2412 fliL; flagellar biosynthesis protein K02415 fliL; flagellar protein FliL
D SM39_2405 fliE; flagellar basal-body component K02408 fliE; flagellar hook-basal body complex protein FliE
D SM39_2411 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D SM39_2432 flgB; flagellar component of cell-proximal portion of basal-body rod K02387 flgB; flagellar basal-body rod protein FlgB
D SM39_2431 flgC; flagellar component of cell-proximal portion of basal-body rod K02388 flgC; flagellar basal-body rod protein FlgC
D SM39_2430 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D SM39_2428 flgF; flagellar component of cell-proximal portion of basal-body rod K02391 flgF; flagellar basal-body rod protein FlgF
D SM39_2427 flgG; flagellar component of cell-distal portion of basal-body rod K02392 flgG; flagellar basal-body rod protein FlgG
D SM39_2424 flgJ; predicted flagellar basal body protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SM39_2429 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D SM39_2423 flgK; flagellar hook-filament junction protein 1 K02396 flgK; flagellar hook-associated protein 1
D SM39_2422 flgL; flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D SM39_2435 flgN; export chaperone for FlgK and FlgL K02399 flgN; flagellar biosynthesis protein FlgN
D SM39_2396 fliC; flagellin K02406 fliC; flagellin
D SM39_2397 fliD; flagellar filament capping protein K02407 fliD; flagellar hook-associated protein 2
D SM39_2398 fliS; flagellar protein potentiates polymerization K02422 fliS; flagellar secretion chaperone FliS
D SM39_2399 fliT; flagellar protein K02423 fliT; flagellar protein FliT
D SM39_2456 flhD; DNA-binding transcriptional dual regulator with FlhC K02403 flhD; flagellar transcriptional activator FlhD
D SM39_2455 flhC; DNA-binding transcriptional dual regulator with FlhD K02402 flhC; flagellar transcriptional activator FlhC
D SM39_2395 fliA; flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D SM39_2454 motA; chemotaxis protein MotA, motility protein A K02556 motA; chemotaxis protein MotA
D SM39_2453 motB; chemotaxis protein MotB, motility protein B K02557 motB; chemotaxis protein MotB
D SM39_2392 fliY; cystine ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SM39_2394 fliZ; flagella biosynthesis protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D SM39_2434 flgM; anti-sigma factor for FliA, sigma 28 K02398 flgM; negative regulator of flagellin synthesis FlgM
D SM39_3622 pilT; putative type II/IV secretion/tfp pilus assembly ATPase K02669 pilT; twitching motility protein PilT
D SM39_2364 type 4 prepilin-like protein leader peptide-processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_0436 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SM39_3217 putative tetratricopeptide repeat protein K02656 pilF; type IV pilus assembly protein PilF
D SM39_1457 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_0962 fimbrial subunit K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_1273 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_3030 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D SM39_1562 putative fimbrial chaperone protein K07346 fimC; fimbrial chaperone protein
D SM39_1455 putative outer membrane fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_1561 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_0964 fimbrial outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1275 putative fimbrial usher protein K07347 fimD; outer membrane usher protein
D SM39_3032 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D SM39_1565 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1564 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1560 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SM39_1563 putative fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:smar04812]
D SM39_3867 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SM39_0080 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D SM39_0079 ftsA; ATP-binding cell division protein involved in recruitment of FtsK to Z ring K03590 ftsA; cell division protein FtsA
D SM39_2228 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D SM39_2229 minD; membrane ATPase of the MinC-MinD-MinE system K03609 minD; septum site-determining protein MinD
D SM39_2230 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D SM39_0815 hypothetical protein K03496 parA; chromosome partitioning protein
D SM39_pSMC1_53 putative partition protein, ParA-like K03496 parA; chromosome partitioning protein
D SM39_pSMC2_14 ParA-like partition protein K03496 parA; chromosome partitioning protein
D SM39_pSMC2_17 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:smar04147]
D SM39_0459 htpG; molecular chaperone HSP90 family K04079 HSP90A; molecular chaperone HtpG
D SM39_0110 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_1868 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SM39_2617 glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_2201 gapA; glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SM39_3534 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SM39_2243 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_1650 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SM39_4037 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SM39_1862 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SM39_0367 putative antioxidant K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D SM39_4686 groEL; chaperone K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SM39_0011 dnaK; chaperone Hsp70, co-chaperone with DnaJ K04043 dnaK; molecular chaperone DnaK
D SM39_3931 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SM39_3201 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SM39_4237 elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_4000 tufB; elongation factor Tu K02358 tuf; elongation factor Tu
D SM39_1391 hinT; purine nucleoside phosphoramidase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SM39_1711 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SM39_3053 putative sodium bile acid symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SM39_2232 fadD; long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_1911 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_0061 putative AMP-binding enzyme K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SM39_4920 acetoacetate-CoA transferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SM39_0774 putative S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SM39_0460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SM39_0455 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SM39_4645 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SM39_4644 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SM39_1069 putative cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SM39_4746 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SM39_0709 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SM39_4104 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SM39_4624 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM39_2093 putative carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SM39_4514 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SM39_4252 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SM39_0968 phoA; bacterial alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3714 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3521 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SM39_4208 purH; fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SM39_4647 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_3604 lpdA; lipoamide dehydrogenase, E3 component is part of three enzyme complexes K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SM39_1910 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SM39_2240 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SM39_4617 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SM39_0706 gpmA; phosphoglyceromutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SM39_4694 blc; outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:smar02048]
D SM39_4855 putative type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SM39_3746 putative type I restriction-modification enzyme, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SM39_4857 putative type I restriction system specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SM39_3748 putative type I restriction-modification enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SM39_4858 putative type I restriction system adenine methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SM39_3750 putative type I restriction-modification enzyme, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SM39_4053 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_0227 putative DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SM39_2668 type III restriction system endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D SM39_2667 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SM39_4874 putative HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D SM39_0252 putative small toxic polypeptide K18919 hokC_D; protein HokC/D
D SM39_3563 putative small toxic polypeptide K18919 hokC_D; protein HokC/D
D SM39_3570 putative small toxic polypeptide K18919 hokC_D; protein HokC/D
D SM39_1111 putative toxin of the toxin-antitoxin system K06218 relE; mRNA interferase RelE/StbE
D SM39_1112 putative antitoxin of the toxin-antitoxin system K18923 stbD; antitoxin StbD
D SM39_4990 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SM39_3007 hypothetical protein K18843 hicB; antitoxin HicB
D SM39_0440 hha; haemolysin expression modulating protein, with H-NS K05839 hha; haemolysin expression modulating protein
D SM39_0441 hypothetical protein K19162 tomB; hha toxicity modulator TomB
D SM39_2053 pspC; DNA-binding transcriptional activator K03973 pspC; phage shock protein C
D SM39_2054 pspB; DNA-binding transcriptional regulator of psp operon K03970 pspB; phage shock protein B
D SM39_0989 putative toxin of gyrase inhibiting toxin-antitoxin system K19163 ccdB; toxin CcdB
D SM39_0988 putative antitoxin of gyrase inhibiting toxin-antitoxin system K19164 ccdA; antitoxin CcdA
D SM39_0863 putative plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D SM39_0860 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D SM39_3830 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D SM39_3831 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SM39_3168 putative plasmid-related PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D SM39_2443 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D SM39_3169 putative plasmid-related protein K18829 mvpT; antitoxin VapB
D SM39_2444 hypothetical protein K18829 mvpT; antitoxin VapB
D SM39_4069 putative plasmid-related PIN domain protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D SM39_4068 putative plasmid-related protein K21495 fitA; antitoxin FitA
D SM39_1363 predicted protein K12148 bssS; biofilm regulator BssS
D SM39_0834 predicted protein K12151 bhsA; multiple stress resistance protein BhsA
D SM39_0833 predicted protein K12151 bhsA; multiple stress resistance protein BhsA
D SM39_0080 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D SM39_3867 mreB; cell wall structural complex MreBCD, actin-like component MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SM39_3694 parC; DNA topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SM39_3699 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SM39_3036 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SM39_3733 putative toxin of toxin-antitoxin system K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D SM39_3734 putative antitoxin of toxin-antitoxin system K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
D SM39_3483 putative membrane protein K19168 cptA; toxin CptA
D SM39_3484 hypothetical protein K09159 cptB; antitoxin CptB
D SM39_3228 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:smar01504]
D SM39_pSMC1_41 blaCYM-8; AmpC-type beta-lactamase, CMY-8 K19095 blaCMY-1; beta-lactamase class C CMY-1 [EC:3.5.2.6]
D SM39_pSMC1_38 blaIMP-1; metallo-beta-lactamase IMP-1 K18782 blaIMP; metallo-beta-lactamase class B IMP [EC:3.5.2.6]
D SM39_3758 aminoglycoside acetyltransferase K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D SM39_pSMC1_34 aadA; aminoglycoside adenyltransferase K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47]
D SM39_1693 str; streptomycin 3''-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D SM39_4391 mdfA; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D SM39_2948 cat; chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D SM39_pSMC1_36 sulI1; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D SM39_pSMC1_47 sulI2; dihydropteroate synthase K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D SM39_2164 smfY; multidrug efflux pump K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SM39_1522 putative fluoroquinolone resistance protein K18555 qnr; fluoroquinolone resistance protein
D SM39_0277 putative two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0941 two-component sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SM39_0276 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_0940 DNA-binding response regulator in two-component regulatory system with CusS K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SM39_1492 phoQ; sensory histidine kinase in two-component regulatory system with PhoP K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SM39_1493 phoP; DNA-binding response regulator in two-component regulatory system with PhoQ K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SM39_0449 sdeX; multidrug efflux pump SdeX K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_1922 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SM39_0448 sdeY; multidrug efflux pump SdeY K18138 acrB; multidrug efflux pump
D SM39_1921 multidrug efflux system protein K18138 acrB; multidrug efflux pump
D SM39_1958 aminoglycoside/multidrug efflux system K18138 acrB; multidrug efflux pump
D SM39_1920 multidrug efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SM39_0481 cueR; DNA-binding transcriptional activator of copper-responsive regulon genes K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SM39_1917 MerR-family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SM39_1913 putative multidrug efflux transporter K19595 gesA; membrane fusion protein, gold/copper resistance efflux system
D SM39_1914 putative multidrug efflux transporter K19594 gesB; gold/copper resistance efflux pump
D SM39_1915 putative outer membrane efflux protein K19593 opmE; outer membrane protein, multidrug efflux system
D SM39_3705 tolC; transport channel K12340 tolC; outer membrane protein
D SM39_1184 ompF; outer membrane pore protein N, non-specific K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:smar00536]
D SM39_3144 putative hemolysin/haemagglutinin K15125 fhaB; filamentous hemagglutinin
D SM39_2079 putative hemolysin/haemagglutinin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smar00537]
D SM39_0968 phoA; bacterial alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_3714 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SM39_1862 putative dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:smar03200]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smar03100]
D SM39_tRNA46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA06 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA78 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA63 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SM39_tRNA45 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA02 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA04 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA03 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA73 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SM39_tRNA38 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA39 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA40 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA41 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SM39_tRNA07 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA08 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA62 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SM39_tRNA26 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SM39_tRNA11 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA13 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA14 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SM39_tRNA52 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA76 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA60 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA69 tRNA-Glt K14224 tRNA-Glu; tRNA Glu
D SM39_tRNA66 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA56 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA81 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA25 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA80 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA82 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SM39_tRNA72 tRNA-His K14226 tRNA-His; tRNA His
D SM39_tRNA05 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA77 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA64 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SM39_tRNA83 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA27 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA85 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA71 tRNA-Ieu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA87 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA86 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA88 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SM39_tRNA24 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA17 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA22 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA19 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA51 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SM39_tRNA12 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA16 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA53 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA84 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA54 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA55 tRNA-Met K14230 tRNA-Met; tRNA Met
D SM39_tRNA58 tRNA-Ile K14230 tRNA-Met; tRNA Met
D SM39_tRNA31 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA57 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA79 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SM39_tRNA42 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA70 tRNA-Prp K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA74 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SM39_tRNA44 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA23 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA29 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA30 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA37 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA01 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SM39_tRNA09 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA65 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA43 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA68 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA59 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SM39_tRNA61 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SM39_tRNA35 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA67 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA36 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SM39_tRNA18 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA50 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA49 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA21 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA48 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA32 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA33 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val
D SM39_tRNA75 tRNA-Sel K14238 tRNA-Sec; tRNA Sec
D SM39_rRNA17 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA06 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA20 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA10 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA01 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SM39_rRNA02 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA05 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA09 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA21 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SM39_rRNA03 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA08 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA22 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA04 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA19 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SM39_rRNA07 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SM39_2885 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D SM39_2884 l-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D SM39_0282 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D SM39_3682 dkgA; 2,5-diketo-D-gluconate reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D SM39_0187 dkgB; 2,5-diketo-D-gluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D SM39_4844 NAD-dependent epimerase/dehydratase K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D SM39_0934 putative reductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D SM39_3024 putative aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D SM39_2764 putative zinc-binding alcohol dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D SM39_1065 putative exported protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SM39_4951 atsB; arylsulfatase-activating protein K24118 atsB; serine-type anaerobic sulfatase-maturating enzyme [EC:1.1.98.7]
D SM39_0381 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D SM39_2711 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D SM39_1854 putative aldehyde dehydrogenase K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D SM39_3766 fadH; 2,4-dienoyl-CoA reductase, NADH and FMN-linked K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D SM39_2460 putative zinc-binding alcohol dehydrogenase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D SM39_1859 pqqC; coenzyme PQQ synthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D SM39_0812 putative oxidoreductase, 2Fe-2S subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SM39_1786 putative oxidoreductase, [2Fe-2S]-binding subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D SM39_0813 putative oxidoreductase, molybdopterin binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SM39_1785 putative oxidoreductase, molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D SM39_1362 solA; N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D SM39_3906 qor; quinone oxidoreductase, NADPH-dependent K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SM39_3696 mdaB; NADPH quinone reductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D SM39_2026 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SM39_0626 NADH-azoreductase, FMN-dependent K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SM39_2403 NADH-azoreductase, FMN-dependent K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SM39_4740 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SM39_2200 msrB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SM39_0969 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SM39_2922 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SM39_3785 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D SM39_3870 putative molybdopterin-binding oxidoreductase K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D SM39_0439 putative cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D SM39_0295 putative cytochrome b561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D SM39_2710 esterase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SM39_2720 putative alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SM39_3114 bcp; putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SM39_2048 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SM39_4370 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SM39_3070 putative Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D SM39_2522 putative Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D SM39_0318 pirin-related metal-binding protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SM39_2315 pirin-related metal-binding protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SM39_3237 hmpA; fused nitric oxide dioxygenase/dihydropteridine reductase 2 K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D SM39_3539 putative choline monooxygenase K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D SM39_3541 putative oxidoreductase, 2Fe-2S subunit K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D SM39_1853 putative monooxygenase K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D SM39_pSMC1_10 merA; mercuric ion reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D SM39_1415 ftnA; ferritin iron storage protein K02217 ftnA; ferritin [EC:1.16.3.2]
D SM39_3597 cueO; multicopper oxidase K14588 cueO; cuproxidase [EC:1.16.3.4]
D SM39_4620 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SM39_3126 putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SM39_1857 pqqE; coenzyme PQQ synthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D SM39_4811 nrdG; anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SM39_1153 pflA; pyruvate formate lyase activating enzyme 1 K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SM39_2082 putative pyruvate formate-lyase 3 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SM39_1129 hcr; NADH oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D SM39_0142 pcm; L-isoaspartate protein carboxyl methyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SM39_0500 cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SM39_1656 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SM39_0307 predicted S-adenosyl-L-methionine-dependent methyltransferase K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D SM39_1338 mdoC; glucans biosynthesis protein K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D SM39_3898 maA; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SM39_3909 putative transferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SM39_0762 putative short-chain dehydrogenase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D SM39_0633 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D SM39_4790 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SM39_4422 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D SM39_0839 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D SM39_0830 putative bifunctional protein, MarR-family transcriptional regulator/acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D SM39_4830 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D SM39_2631 putative acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D SM39_1141 aat; leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SM39_3347 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D SM39_3425 lgt; phosphatidylglycerol-prolipoproteindiacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SM39_0264 putative lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SM39_2961 apbE; predicted thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SM39_0933 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D SM39_1095 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D SM39_1635 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SM39_3718 glnE; fused deadenylyltransferase/adenylyltransferase for glutamine synthetase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D SM39_1626 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D SM39_2626 mdoB; phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D SM39_3951 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D SM39_4668 ferric-siderophore esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D SM39_1907 ferric siderophore esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D SM39_3042 enterobactin/ferric enterobactin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D SM39_0691 acyl-CoA thioester hydrolase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SM39_2134 trpH; putative phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SM39_2972 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SM39_2811 rtn; putative signal transduction protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SM39_4349 putative signal transduction protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SM39_3617 endA; DNA-specific endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D SM39_1383 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SM39_4253 tatD; DNase, magnesium-dependent K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SM39_4996 putative TatD-related DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SM39_0654 putative alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-]
D SM39_0270 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D SM39_4351 bcsZ; endo-1,4-D-glucanase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D SM39_0552 phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SM39_0176 predicted lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SM39_4595 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SM39_1263 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SM39_2852 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SM39_1443 predicted glycosyl hydrolase K03931 ygjK; glucosidase [EC:3.2.1.-]
D SM39_3961 fms; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SM39_0157 chbG; hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D SM39_3861 putative carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D SM39_2279 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D SM39_1851 putative alpha/beta hydrolase K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]
D SM39_4821 putative endoribonuclease K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SM39_3719 putative adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D SM39_0411 cof; thiamin pyrimidine pyrophosphate hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D SM39_1993 predicted NUDIX hydrolase K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D SM39_3095 nudK; predicted NUDIX hydrolase K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D SM39_1370 putative inhibitor of septum formation K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D SM39_4487 ravA; ATPase, regulatory ATPase variant A K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SM39_0932 possible sugar aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D SM39_2081 fsaA; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D SM39_4705 putative carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SM39_3410 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D SM39_2505 putative membrane transport protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D SM39_4976 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D SM39_3181 srlQ; putative phosphosugar-binding protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D SM39_0931 putative sugar isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D SM39_4747 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelateligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SM39_1703 rnfD; electron transport complex protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D SM39_1706 rnfC; electron transport complex protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D SM39_1707 rnfB; electron transport complex protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D SM39_0258 NADH-ubiquinone oxidoreductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D SM39_0259 NADH-ubiquinone oxidoreductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D SM39_0260 Na+-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D SM39_0261 Na+-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D SM39_0262 Na+-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D SM39_0263 NADH-ubiquinone oxidoreductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D SM39_4294 zntA; zinc, cobalt and lead efflux system K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SM39_4818 mgtA; magnesium transporter K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D SM39_2527 magnesium transporting ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D SM39_3578 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D SM39_4125 iolH; putative myo-inositol isomerase K06605 iolH; myo-inositol catabolism protein IolH
C 99982 Energy metabolism
D SM39_2520 fdhD; formate dehydrogenase formation protein K02379 fdhD; FdhD protein
D SM39_0496 fdrA; predicted acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain K02381 fdrA; FdrA protein
D SM39_3223 fdx; [2Fe-2S] ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D SM39_2870 putative ferredoxin K11107 yfaE; ferredoxin
D SM39_1702 rnfG; electron transport complex protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D SM39_1701 rnfE; electron transport complex protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D SM39_1708 rnfA; electron transport complex protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D SM39_4483 mioC; FMN-binding protein MioC K06205 mioC; MioC protein
D SM39_3479 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D SM39_3227 iscU; scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D SM39_3847 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D SM39_0652 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D SM39_2498 putative pyridine nucleotide-disulphide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
D SM39_0811 putative oxidoreductase, cytochrome C subunit K23275 fdhC; fructose 5-dehydrogenase cytochrome subunit
C 99983 Lipid metabolism
D SM39_4719 aidB; probable acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D SM39_3324 nrdI; glutaredoxin-like protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D SM39_3057 cysZ; predicted inner membrane protein K06203 cysZ; CysZ protein
D SM39_3369 dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein
D SM39_2046 mpaA; murein peptide amidase A K14054 mpaA; murein peptide amidase A
D SM39_3623 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SM39_2091 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D SM39_2090 tetratricopeptide repeat protein K19804 lapB; lipopolysaccharide assembly protein B
D SM39_4352 bcsB; cellulose synthase regulator protein K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D SM39_4326 hemY; predicted protoheme IX synthesis protein K02498 hemY; HemY protein
D SM39_2276 hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
D SM39_4257 ubiB; ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D SM39_4258 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D SM39_3716 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D SM39_4789 putative sterol carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D SM39_4499 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D SM39_3668 abgT; predicted cryptic aminobenzoyl-glutamatetransporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D SM39_3692 sufI; suppressor of ftsI K04753 sufI; suppressor of ftsI
D SM39_4456 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D SM39_2601 putative membrane protein K15977 K15977; putative oxidoreductase
D SM39_3784 putative membrane protein K15977 K15977; putative oxidoreductase
D SM39_3309 putative membrane protein K15977 K15977; putative oxidoreductase
D SM39_3107 putative esterase K06999 K06999; phospholipase/carboxylesterase
D SM39_3348 putative CoA-binding acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SM39_3179 srlM; glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D SM39_3850 putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D SM39_2298 cspC; stress protein, member of the CspA-family K03704 cspA; cold shock protein
D SM39_1136 cspD; cold shock-like protein K03704 cspA; cold shock protein
D SM39_1169 cold shock-like protein K03704 cspA; cold shock protein
D SM39_1170 DNA-binding transcriptional repressor K03704 cspA; cold shock protein
D SM39_0605 cspE; cold shock-like protein K03704 cspA; cold shock protein
D SM39_2282 cold shock-like protein K03704 cspA; cold shock protein
D SM39_2536 cold shock-like protein K03704 cspA; cold shock protein
D SM39_1523 cold shock-like protein K03704 cspA; cold shock protein
D SM39_4216 rsd; stationary phase protein, binds sigma 70 RNA polymerase subunit K07740 rsd; regulator of sigma D
D SM39_0416 glnK; nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB K04752 glnK; nitrogen regulatory protein P-II 2
D SM39_4075 putative RNA-binding protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D SM39_2033 hslJ; heat-inducible protein K03668 hslJ; heat shock protein HslJ
D SM39_1138 clpS; ATP-dependent Clp protease adaptor protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SM39_0400 tig; peptidyl-prolyl cis/trans isomerase K03545 tig; trigger factor
D SM39_3871 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D SM39_4400 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D SM39_3288 smpB; trans-translation protein K03664 smpB; SsrA-binding protein
D SM39_3323 nrdH; glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D SM39_4204 putative magnesium chelatase K07391 comM; magnesium chelatase family protein
D SM39_3444 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D SM39_4027 OsmC-like protein K07397 yhfA; putative redox protein
D SM39_4084 gntY; putative iron-sulphur cluster assembly protein K07400 nfuA; Fe/S biogenesis protein NfuA
D SM39_1834 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D SM39_3613 putative oxidoreductase maturation factor K07402 xdhC; xanthine dehydrogenase accessory factor
D SM39_0895 putative glutathione S-transferase K11208 yncG; GST-like protein
C 99976 Replication and repair
D SM39_0420 putative DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D SM39_3404 exonuclease IX K01146 xni; protein Xni
D SM39_4866 hypothetical protein K07454 K07454; putative restriction endonuclease
D SM39_4539 radC; DNA repair protein K03630 radC; DNA repair protein RadC
D SM39_3736 putative DNA repair protein K03630 radC; DNA repair protein RadC
D SM39_4260 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D SM39_1132 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D SM39_3791 hypothetical protein K07460 yraN; putative endonuclease
D SM39_4791 putative nuclease K07461 K07461; putative endonuclease
D SM39_3960 dprA; DNA protecting protein K04096 smf; DNA processing protein
D SM39_2496 putative effector-binding regulatory protein K07470 sbmC; DNA gyrase inhibitor
D SM39_1149 rarA; recombination protein K07478 ycaJ; putative ATPase
D SM39_3958 putative DNA-binding protein K07479 yrdD; putative DNA topoisomerase
D SM39_0119 transposase of IS3 family K07483 K07483; transposase
D SM39_0125 transposase of IS3 family K07483 K07483; transposase
D SM39_4490 transposase of IS3 family K07483 K07483; transposase
D SM39_2380 transposase of IS3 family K07483 K07483; transposase
D SM39_4861 transposase of IS3 family K07483 K07483; transposase
D SM39_4880 transposase of IS66 family K07483 K07483; transposase
D SM39_1939 transposase of IS3 family K07483 K07483; transposase
D SM39_4760 transposase of IS3 family K07483 K07483; transposase
D SM39_4881 transposase of IS66 family K07484 K07484; transposase
D SM39_4882 transposase of IS66 family K07484 K07484; transposase
D SM39_4873 transposase of IS256 family K07493 K07493; putative transposase
D SM39_pSMC1_50 tniA; transposase K07497 K07497; putative transposase
D SM39_4860 transposase of IS3 family K07497 K07497; putative transposase
D SM39_4863 transposase of IS3 family K07497 K07497; putative transposase
D SM39_4864 transposase of IS3 family K07497 K07497; putative transposase
D SM39_4868 putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SM39_2055 pspA; regulatory protein for phage-shock-protein operon K03969 pspA; phage shock protein A
D SM39_2052 pspD; phage shock protein D K03971 pspD; phage shock protein D
D SM39_0457 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SM39_2989 putative membrane protein K21990 yfdC; formate-nitrite transporter family protein
D SM39_4327 putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D SM39_3538 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D SM39_1403 putative oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SM39_1698 tppB; tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SM39_3365 putative oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SM39_1350 putative oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SM39_1991 putative low-affinity inorganic phosphate transporter 2 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SM39_1060 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SM39_0006 putative sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SM39_0361 brnQ; predicted branched chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SM39_3545 predicted branched chain amino acid transporter K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SM39_3934 putative sodium bile acid symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D SM39_4530 putative nucleoside transporter, except guanosine K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D SM39_4997 putative nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D SM39_0055 putative transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D SM39_1099 putative transporter K07085 K07085; putative transport protein
D SM39_4434 putative transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D SM39_2148 putative intracellular septation protein K06190 ispZ; intracellular septation protein
D SM39_4298 periplasmic protein K27311 dcrB; inner membrane lipoprotein DcrB
D SM39_4734 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D SM39_2220 hypothetical protein K06415 spoVR; stage V sporulation protein R
D SM39_4561 anaerobic glycerol-3-phosphate dehydrogenase subunit B K22719 envC; murein hydrolase activator
C 99993 Cell motility
D SM39_1393 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D SM39_1210 putative DNA transformation protein K07343 tfoX; DNA transformation protein and related proteins
D SM39_4146 LuxR-family transcriptional regulator K08087 fimW; fimbrial protein FimW
D SM39_3401 syd; Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D SM39_0095 ampE; predicted inner membrane protein K03807 ampE; AmpE protein
D SM39_1570 proQ; ProP effector K03607 proQ; ProP effector
D SM39_1442 universal stress protein K06149 uspA; universal stress protein A
D SM39_1525 universal stress protein K06149 uspA; universal stress protein A
D SM39_4162 uspA; universal stress global response regulator K06149 uspA; universal stress protein A
D SM39_2459 uspC; universal stress protein K14064 uspC; universal stress protein C
D SM39_2010 uspE; universal stress protein K14055 uspE; universal stress protein E
D SM39_1507 uspD; universal stress protein K14061 uspF; universal stress protein F
D SM39_1301 universal stress protein K11932 uspG; universal stress protein G
D SM39_2076 cstA; carbon starvation protein K06200 cstA; carbon starvation protein
D SM39_4515 typA; GTP-binding protein K06207 typA; GTP-binding protein
D SM39_3759 putative membrane protein K07168 K07168; CBS domain-containing membrane protein
D SM39_2486 type VI secretion system-associated protein, containing FHA domain K07169 K07169; FHA domain-containing protein
D SM39_0636 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SM39_2382 phoH; conserved protein with nucleoside triphosphate hydrolase domain K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SM39_2205 hypothetical protein K07180 prkA; serine protein kinase
D SM39_3720 htrG; predicted signal transduction protein K07184 ygiM; SH3 domain protein
D SM39_5002 smp; putative membrane protein K07186 smp; membrane protein
D SM39_0390 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D SM39_1148 lolA; chaperone for lipoproteins K03634 lolA; outer membrane lipoprotein carrier protein
D SM39_1465 lolB; outer membrane lipoprotein K02494 lolB; outer membrane lipoprotein LolB
D SM39_2979 vacJ; predicted lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SM39_4338 wzzE; enterobacterial common antigen polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D SM39_1679 slyB; outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D SM39_3379 skp; chaperone protein K06142 hlpA; outer membrane protein
D SM39_0143 nlpD; predicted outer membrane lipoprotein K06194 nlpD; lipoprotein NlpD
D SM39_3464 putative cell wall endopeptidase K12943 ygeR; lipoprotein YgeR
D SM39_4778 nlpI; hypothetical protein K05803 nlpI; lipoprotein NlpI
D SM39_2144 ompW; outer membrane protein W K07275 ompW; outer membrane protein
D SM39_0178 putative exported protein K07283 ydiY; putative salt-induced outer membrane protein
D SM39_2233 putative outer membrane lipoprotein K07285 slp; outer membrane lipoprotein
D SM39_0398 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D SM39_1012 asmA; predicted assembly protein K07289 asmA; AsmA protein
D SM39_4188 putative outer membrane proteins assembly protein K07290 yhjG; AsmA family protein
D SM39_0482 putative membrane protein K07340 ybbJ; inner membrane protein
D SM39_4783 putative multidrug efflux pump K01993 ABC-2.TX; HlyD family secretion protein
D SM39_1358 predicted inner membrane protein K11744 tqsA; AI-2 transport protein TqsA
D SM39_2085 osmB; osmotically inducible lipoprotein B precursor K04062 osmB; osmotically inducible lipoprotein OsmB
D SM39_1817 lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB
D SM39_1098 putative osmotically-inducible lipoprotein K04064 osmE; osmotically inducible lipoprotein OsmE
D SM39_2856 osmE; osmotically inducible lipoprotein K04064 osmE; osmotically inducible lipoprotein OsmE
D SM39_3480 creD; putative colicin-interacting membrane protein K06143 creD; inner membrane protein
D SM39_2984 ccmE; cytochrome C biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D SM39_2981 ccmH; heme lyase, CcmH subunit K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SM39_3216 putative transcriptional regulator K15539 rodZ; cytoskeleton protein RodZ
D SM39_3854 aaeX; putative membrane protein K21695 aaeX; protein AaeX
D SM39_3467 hdeD; putative membrane protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D SM39_4464 phoU; negative regulator of PhoR/PhoB two-component regulator K02039 phoU; phosphate transport system protein
D SM39_3998 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D SM39_1339 mdoG; glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein
D SM39_4680 cutA; divalent-cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D SM39_2265 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D SM39_4802 phnK; carbon-phosphorus lyase complex subunit K05781 phnK; putative phosphonate transport system ATP-binding protein
D SM39_0037 apaG; protein associated with Co2+ and Mg2+ efflux K06195 apaG; ApaG protein
D SM39_4321 cyaY; frataxin, iron-binding and oxidizing protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D SM39_1630 hemS; hemin-degrading protein K07225 hmuS; putative hemin transport protein
D SM39_0451 putative sulfur reduction protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SM39_2932 cvpA; membrane protein required for colicin V production K03558 cvpA; membrane protein required for colicin V production
D SM39_1200 pqiB; paraquat-inducible exported protein K06192 pqiB; paraquat-inducible protein B
D SM39_2270 mviM; oxidoreductase K03810 mviM; virulence factor
D SM39_2376 chaB; predicted cation regulator K06197 chaB; cation transport regulator
D SM39_2566 paaY; phenylacetic acid degradation protein K02617 paaY; phenylacetic acid degradation protein
D SM39_4992 osmY; periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D SM39_1405 putative phosphoesterase K04477 ycdX; putative hydrolase
D SM39_1861 pqqA; coenzyme PQQ synthesis protein A K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A
D SM39_1860 pqqB; coenzyme PQQ synthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D SM39_1858 pqqD; coenzyme PQQ synthesis protein D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D SM39_3280 grcA; autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor
D SM39_2184 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D SM39_3330 patatin-like phospholipase K07001 K07001; NTE family protein
D SM39_0098 erpA; iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D SM39_1642 sufA; Fe-S cluster assembly protein K05997 sufA; Fe-S cluster assembly protein SufA
D SM39_1643 sufB; component of SufBCD complex K09014 sufB; Fe-S cluster assembly protein SufB
D SM39_1645 sufD; component of cysteine desulfurase activator complex K09015 sufD; Fe-S cluster assembly protein SufD
D SM39_1584 putative membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D SM39_4114 predicted hydrolase K07048 PTER; phosphotriesterase-related protein
D SM39_4517 rbn; tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D SM39_4185 putative membrane protein K07058 K07058; membrane protein
D SM39_4684 fxsA; inner membrane protein K07113 fxsA; UPF0716 protein FxsA
D SM39_1647 sufE; cysteine desulfuration protein K02426 sufE; cysteine desulfuration protein SufE
D SM39_3411 csdE; desulfuration protein K02426 sufE; cysteine desulfuration protein SufE
D SM39_1355 rhodanese-like protein K07146 K07146; UPF0176 protein
D SM39_1500 hflD; predicted lysogenization regulator K07153 hflD; high frequency lysogenization protein
D SM39_2549 hypothetical protein K04750 phnB; PhnB protein
D SM39_1343 msyB; hypothetical protein K12147 msyB; acidic protein MsyB
D SM39_4009 slyX; hypothetical protein K03745 slyX; SlyX protein
D SM39_3959 smg; hypothetical protein K03747 smg; Smg protein
D SM39_5022 creA; hypothetical protein K05805 creA; CreA protein
D SM39_3616 sprT; putative metallopeptidase K02742 sprT; SprT protein
D SM39_2933 dedD; hypothetical protein K03749 dedD; DedD protein
D SM39_4054 damX; predicted protein K03112 damX; DamX protein
D SM39_1000 sanA; predicted protein K03748 sanA; SanA protein
D SM39_2936 dedA; inner membrane protein K03975 dedA; membrane-associated protein
D SM39_1568 putative membrane protein K03808 pqiA; paraquat-inducible protein A
D SM39_1199 pqiA; paraquat-inducible membrane protein K03808 pqiA; paraquat-inducible protein A
D SM39_2883 hypothetical protein K05594 elaB; ElaB protein
D SM39_3298 putative inner membrane protein K00389 yidH; putative membrane protein
D SM39_3586 hypothetical protein K00389 yidH; putative membrane protein
D SM39_4676 putative membrane protein K08984 yjdF; putative membrane protein
D SM39_2314 putative membrane protein K08987 K08987; putative membrane protein
D SM39_4720 putative membrane protein K08989 K08989; putative membrane protein
D SM39_2050 putative membrane protein K08990 ycjF; putative membrane protein
D SM39_4289 putative membrane protein K08993 yhhL; putative membrane protein
D SM39_2185 putative nucleic acid binding domain K09858 K09858; SEC-C motif domain protein
D SM39_0419 lipoprotein K09914 K09914; putative lipoprotein
D SM39_3922 malM; maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D SM39_3929 psiE; putative phosphate-starvation-inducible protein K13256 psiE; protein PsiE
D SM39_0349 aroM; hypothetical protein K14591 aroM; protein AroM
D SM39_0637 phnA; putative alkylphosphonate uptake protein K06193 phnA; protein PhnA
D SM39_2500 putative membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D SM39_3278 phlB; phospholipase associated ankyrin repeat-containing protein K06867 K06867; uncharacterized protein
D SM39_3300 putative chondroitin sulfate/heparin utilization regulation protein K06871 K06871; uncharacterized protein
D SM39_0275 putative hydrolase K06889 K06889; uncharacterized protein
D SM39_0287 putative exported protein K06889 K06889; uncharacterized protein
D SM39_4723 putative esterase K06889 K06889; uncharacterized protein
D SM39_0745 putative membrane protein K06890 K06890; uncharacterized protein
D SM39_1689 hypothetical protein K06893 K06893; uncharacterized protein
D SM39_4600 putative phage baseplate assembly protein W K06903 W; Bacteriophage baseplate protein W
D SM39_4611 putative phage late control protein D K06905 D; Bacteriophage probable baseplate hub protein
D SM39_4610 putative phage protein U K06906 gpU; phage tail protein
D SM39_4605 putative phage tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D SM39_4606 putative phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D SM39_2051 hypothetical protein K06918 K06918; uncharacterized protein
D SM39_1216 putative CoA-binding protein K06929 K06929; uncharacterized protein
D SM39_1671 hypothetical protein K06938 K06938; uncharacterized protein
D SM39_3327 hypothetical protein K06938 K06938; uncharacterized protein
D SM39_2801 hypothetical protein K06940 K06940; uncharacterized protein
D SM39_2145 hypothetical protein K06940 K06940; uncharacterized protein
D SM39_3744 putative GTPase K06946 K06946; uncharacterized protein
D SM39_1688 putative metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D SM39_1583 putative sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D SM39_3307 putative acetyltransferase K06975 K06975; uncharacterized protein
D SM39_4945 hypothetical protein K06995 K06995; uncharacterized protein
D SM39_1396 hypothetical protein K07000 K07000; uncharacterized protein
D SM39_3700 putative esterase K07000 K07000; uncharacterized protein
D SM39_2573 putative pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D SM39_2016 putative pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D SM39_3160 putative pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein
D SM39_2825 putative sulfatase K07014 K07014; uncharacterized protein
D SM39_3654 putative esterase K07017 K07017; uncharacterized protein
D SM39_4024 putative alpha/beta hydrolase K07019 K07019; uncharacterized protein
D SM39_3890 hypothetical protein K07032 K07032; uncharacterized protein
D SM39_0010 putative membrane protein K07034 K07034; uncharacterized protein
D SM39_3109 putative neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D SM39_4014 hypothetical protein K07070 K07070; uncharacterized protein
D SM39_2924 hypothetical protein K07071 K07071; uncharacterized protein
D SM39_2654 putative DNA polymerase beta subunit K07075 K07075; uncharacterized protein
D SM39_1439 TRAP-type transport system substrate-binding protein K07080 K07080; uncharacterized protein
D SM39_4808 putative permease K07089 K07089; uncharacterized protein
D SM39_1777 putative membrane protein K07090 K07090; uncharacterized protein
D SM39_2967 putative membrane protein K07090 K07090; uncharacterized protein
D SM39_3843 putative membrane protein K07090 K07090; uncharacterized protein
D SM39_1836 putative permease K07090 K07090; uncharacterized protein
D SM39_0035 putative exported protein K07093 K07093; uncharacterized protein
D SM39_2921 putative phosphodiesterase K07095 K07095; uncharacterized protein
D SM39_2749 putative exported protein K07109 K07109; uncharacterized protein
D SM39_4737 putative exported protein K07109 K07109; uncharacterized protein
D SM39_4780 putative membrane protein K07112 K07112; uncharacterized protein
D SM39_1347 probable membrane protein K07112 K07112; uncharacterized protein
D SM39_1348 probable membrane protein K07112 K07112; uncharacterized protein
D SM39_1669 hypothetical protein K07118 K07118; uncharacterized protein
D SM39_3790 putative outer membrane lipoprotein K07121 K07121; uncharacterized protein
D SM39_2259 putative membrane protein K07136 K07136; uncharacterized protein
D SM39_3798 radical SAM superfamily K07139 K07139; uncharacterized protein
D SM39_1196 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D SM39_0995 putative membrane protein K07148 K07148; uncharacterized protein
D SM39_4451 hypothetical protein K08998 K08998; uncharacterized protein
D SM39_3626 hypothetical protein K09131 K09131; uncharacterized protein
D SM39_0613 hypothetical protein K09158 K09158; uncharacterized protein
D SM39_2224 hypothetical protein K09160 K09160; uncharacterized protein
D SM39_2908 hypothetical protein K09161 K09161; uncharacterized protein
D SM39_0313 putative lipoprotein K09712 K09712; uncharacterized protein
D SM39_3077 hypothetical protein K09768 K09768; uncharacterized protein
D SM39_2152 hypothetical protein K09780 K09780; uncharacterized protein
D SM39_0779 putative membrane protein K09781 K09781; uncharacterized protein
D SM39_2206 hypothetical protein K09786 K09786; uncharacterized protein
D SM39_0454 putative membrane protein K09790 K09790; uncharacterized protein
D SM39_1172 hypothetical protein K09791 K09791; uncharacterized protein
D SM39_4560 anaerobic glycerol-3-phosphate dehydrogenase subunit A K09798 K09798; uncharacterized protein
D SM39_3286 hypothetical protein K09801 K09801; uncharacterized protein
D SM39_2768 hypothetical protein K09802 K09802; uncharacterized protein
D SM39_3504 putative membrane protein K09803 K09803; uncharacterized protein
D SM39_3524 putative exported protein K09807 K09807; uncharacterized protein
D SM39_1133 hypothetical protein K09824 virK; uncharacterized protein
D SM39_0265 putative exported protein K05952 K05952; uncharacterized protein
D SM39_1201 putative lipoprotein K09857 K09857; uncharacterized protein
D SM39_0005 hypothetical protein K09861 K09861; uncharacterized protein
D SM39_0086 hypothetical protein K09862 K09862; uncharacterized protein
D SM39_4212 hypothetical protein K09891 K09891; uncharacterized protein
D SM39_4509 hypothetical protein K09894 K09894; uncharacterized protein
D SM39_3517 hypothetical protein K09895 K09895; uncharacterized protein
D SM39_4501 hypothetical protein K09896 K09896; uncharacterized protein
D SM39_4205 hypothetical protein K09897 K09897; uncharacterized protein
D SM39_4025 hypothetical protein K09898 K09898; uncharacterized protein
D SM39_2909 hypothetical protein K09899 K09899; uncharacterized protein
D SM39_2168 hypothetical protein K09901 K09901; uncharacterized protein
D SM39_2227 hypothetical protein K09902 K09902; uncharacterized protein
D SM39_2824 hypothetical protein K09904 K09904; uncharacterized protein
D SM39_2267 hypothetical protein K09907 K09907; uncharacterized protein
D SM39_3808 putative exported protein K09908 K09908; uncharacterized protein
D SM39_1215 putative exported protein K09909 K09909; uncharacterized protein
D SM39_3601 hypothetical protein K09910 K09910; uncharacterized protein
D SM39_1207 hypothetical protein K09911 K09911; uncharacterized protein
D SM39_3527 hypothetical protein K09912 K09912; uncharacterized protein
D SM39_2271 hypothetical protein K09915 K09915; uncharacterized protein
D SM39_2199 hypothetical protein K09916 K09916; uncharacterized protein
D SM39_2284 hypothetical protein K09917 K09917; uncharacterized protein
D SM39_2280 hypothetical protein K09918 K09918; uncharacterized protein
D SM39_3702 hypothetical protein K09920 K09920; uncharacterized protein
D SM39_4318 hypothetical protein K09921 K09921; uncharacterized protein
D SM39_3631 hypothetical protein K09923 K09923; uncharacterized protein
D SM39_1171 hypothetical protein K09927 K09927; uncharacterized protein
D SM39_0875 putative membrane protein K09932 K09932; uncharacterized protein
D SM39_4714 putative membrane protein K09937 K09937; uncharacterized protein
D SM39_0324 hypothetical protein K09945 K09945; uncharacterized protein
D SM39_3170 hypothetical protein K09946 K09946; uncharacterized protein
D SM39_3054 hypothetical protein K09954 K09954; uncharacterized protein
D SM39_2857 hypothetical protein K09958 K09958; uncharacterized protein
D SM39_0562 hypothetical protein K09961 K09961; uncharacterized protein
D SM39_3050 hypothetical protein K09962 K09962; uncharacterized protein
D SM39_0479 hypothetical protein K09973 K09973; uncharacterized protein
D SM39_1546 hypothetical protein K09975 K09975; uncharacterized protein
D SM39_2027 putative exported protein K09978 K09978; uncharacterized protein
D SM39_4795 hypothetical protein K09979 K09979; uncharacterized protein
D SM39_0306 hypothetical protein K09990 K09990; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024