+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus suis SC070731 (serotype 2)
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D NJAUSS_1104 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C NJAUSS_1299 GTP-binding protein Era K03595 era; GTPase
C NJAUSS_0801 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C NJAUSS_1704 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C NJAUSS_1680 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
C NJAUSS_1828 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D NJAUSS_1785 16S rRNA uridine-516 pseudouridylate synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NJAUSS_0706 16S rRNA uridine-516 pseudouridylate synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D NJAUSS_1847 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NJAUSS_0394 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NJAUSS_1012 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NJAUSS_1553 Putative rRNA methyltransferase ylbH K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NJAUSS_1936 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NJAUSS_0381 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NJAUSS_1611 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NJAUSS_0723 methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NJAUSS_0836 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D NJAUSS_1529 rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D NJAUSS_1367 SAM-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D NJAUSS_1751 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NJAUSS_2009 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D NJAUSS_1167 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D NJAUSS_1549 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NJAUSS_1529 rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D NJAUSS_0561 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D NJAUSS_1570 16S rRNA uridine-516 pseudouridylate synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NJAUSS_0990 pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NJAUSS_0829 YlyB K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NJAUSS_1833 pseudouridylate synthase, 23S RNA-specific K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NJAUSS_0669 rRNA adenine N-6-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
B ribosomal protein modification factors
C NJAUSS_1786 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C NJAUSS_0177 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C NJAUSS_0859 RimM protein, required for 16S rRNA processing K02860 rimM; 16S rRNA processing protein RimM
C NJAUSS_1937 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C NJAUSS_1104 dsRNA-specific ribonuclease K03685 rnc; ribonuclease III [EC:3.1.26.3]
C NJAUSS_0077 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C NJAUSS_1771 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C NJAUSS_1453 superfamily II DNA/RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C NJAUSS_1605 superfamily II DNA/RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C NJAUSS_1299 GTP-binding protein Era K03595 era; GTPase
C NJAUSS_1840 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C NJAUSS_1594 GTP-binding protein EngA K03977 engA; GTPase
C NJAUSS_0801 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
C NJAUSS_0938 ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
C NJAUSS_1212 GTPase K03665 hflX; GTPase
C NJAUSS_0348 GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C NJAUSS_0886 translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C NJAUSS_1927 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C NJAUSS_1700 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C NJAUSS_1705 Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
C NJAUSS_1998 Uncharacterized protein K14761 rlbA; ribosome-associated protein
C NJAUSS_0354 Uncharacterized protein K09710 ybeB; ribosome-associated protein
C NJAUSS_1301 metalloprotease K07042 ybeY; probable rRNA maturation factor
C NJAUSS_0349 putative RNA-binding protein YqeI K07574 yhbY; RNA-binding protein
C NJAUSS_0406 ribosome-associated protein Y (PSrp-1) K05808 hpf; ribosome hibernation promoting factor
C NJAUSS_0006 GTPase, translation factor K06942 ychF; ribosome-binding ATPase
C NJAUSS_1602 Uncharacterized protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024