+D GENES KO #

  KEGG Orthology (KO) - Thiocystis violascens

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tvi00010] D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thivi_0105 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_3381 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_2341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thivi_3909 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thivi_2347 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thivi_2344 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thivi_4328 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thivi_2343 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_2419 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_3053 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thivi_1903 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thivi_3407 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Thivi_3406 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3813 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_3180 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_0739 aldose 1-epimerase-like enzyme K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Thivi_0237 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Thivi_0263 PTS system D-glucose-specific IIC component, Glc family K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] C 00020 Citrate cycle (TCA cycle) [PATH:tvi00020] D Thivi_2850 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1] D Thivi_0521 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1] D Thivi_1892 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Thivi_4572 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Thivi_3855 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Thivi_3854 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3358 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Thivi_3357 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Thivi_2777 menaquinone-dependent succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_4349 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_2776 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_4347 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_2778 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4351 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4350 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Thivi_4525 tartrate dehydratase alpha subunit/fumarate hydratase class I, N-terminal domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Thivi_0050 pyruvate carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Thivi_0052 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Thivi_0237 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Thivi_3407 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Thivi_3406 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Thivi_3813 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_3180 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:tvi00030] D Thivi_0105 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thivi_0103 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Thivi_4357 6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Thivi_4625 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Thivi_3477 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thivi_3122 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_3123 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_2348 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_2932 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Thivi_4240 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Thivi_2114 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_4178 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Thivi_1024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Thivi_2341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_3381 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:tvi00040] D Thivi_4182 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thivi_0536 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thivi_3477 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thivi_2514 pentulose/hexulose kinase K22935 XK1; D-ribulokinase [EC:2.7.1.47] C 00051 Fructose and mannose metabolism [PATH:tvi00051] D Thivi_1156 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Thivi_2629 mannose-1-phosphate guanylyltransferase (GDP), mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thivi_3375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_3381 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_2341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thivi_3909 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thivi_2240 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:tvi00052] D Thivi_4343 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thivi_0536 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_3381 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:tvi00053] D Thivi_4182 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thivi_2513 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:tvi00500] D Thivi_1158 HAD-superfamily hydrolase, subfamily IIB K00696 E2.4.1.14; sucrose-phosphate synthase [EC:2.4.1.14] D Thivi_1155 glycosidase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4] D Thivi_0536 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thivi_0269 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_4497 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_0887 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Thivi_2900 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thivi_4500 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thivi_4327 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thivi_0102 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_4486 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_3276 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_2901 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Thivi_0974 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Thivi_3657 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Thivi_3462 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Thivi_2113 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Thivi_3764 1,4-alpha-glucan branching enzyme K01200 pulA; pullulanase [EC:3.2.1.41] D Thivi_0228 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D Thivi_3980 alpha-amylase/alpha-mannosidase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Thivi_4484 alpha-amylase/alpha-mannosidase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Thivi_3275 glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D Thivi_4626 pullulanase-like glycosidase possibly secreted by type II secretory pathway K01214 ISA; isoamylase [EC:3.2.1.68] D Thivi_1749 glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thivi_0105 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thivi_1156 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tvi00520] D Thivi_3161 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Thivi_1156 sugar kinase, ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Thivi_1928 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thivi_0937 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Thivi_2589 glucosamine-1-phosphate N-acetyltransferase, UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thivi_1028 2-phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Thivi_1120 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Thivi_1974 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Thivi_3229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thivi_2317 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thivi_4284 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Thivi_4283 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Thivi_2375 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Thivi_2177 nucleoside-diphosphate-sugar epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] D Thivi_2178 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Thivi_0263 PTS system D-glucose-specific IIC component, Glc family K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_0536 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thivi_4182 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thivi_4343 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thivi_2513 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Thivi_2240 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thivi_0105 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thivi_3375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Thivi_2629 mannose-1-phosphate guanylyltransferase (GDP), mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thivi_0887 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Thivi_0886 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Thivi_3871 2-polyprenylphenol hydroxylase-like oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Thivi_0752 flavodoxin reductase family protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Thivi_2900 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thivi_4500 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Thivi_4327 ADP-glucose pyrophosphorylase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:tvi00620] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_3813 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_3180 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_3407 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Thivi_3406 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_0977 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0491 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0976 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0492 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_2343 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_2419 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_0840 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thivi_1100 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Thivi_1101 biotin carboxylase, acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thivi_0915 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Thivi_1134 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Thivi_3025 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Thivi_1567 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Thivi_1824 Zn-dependent hydrolase, glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Thivi_2510 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Thivi_2539 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Thivi_2498 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Thivi_2497 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Thivi_2499 sodium pump decarboxylase gamma subunit family protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Thivi_0050 pyruvate carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Thivi_0052 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Thivi_4525 tartrate dehydratase alpha subunit/fumarate hydratase class I, N-terminal domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Thivi_2806 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thivi_0237 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Thivi_3053 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thivi_1903 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thivi_2151 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3771 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thivi_4590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thivi_4287 homocitrate synthase NifV K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tvi00630] D Thivi_3995 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_2151 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9] D Thivi_2850 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1] D Thivi_0521 citrate synthase I, hexameric type K01647 CS; citrate synthase [EC:2.3.3.1] D Thivi_1892 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3435 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Thivi_1576 FAD/FMN-dependent dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Thivi_0674 FAD/FMN-dependent dehydrogenase K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Thivi_0675 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Thivi_3597 Fe-S oxidoreductase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Thivi_1421 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_1523 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_0209 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Thivi_2189 haloacid dehalogenase superfamily enzyme, subfamily IA K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Thivi_0531 putative phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Thivi_3478 2-phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Thivi_1570 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_1992 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_4238 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_1571 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_1030 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thivi_1840 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Thivi_1842 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Thivi_1838 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_1839 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Thivi_0676 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D Thivi_1024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] C 00640 Propanoate metabolism [PATH:tvi00640] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_3075 acyl-CoA synthetase/AMP-acid ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Thivi_0977 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0491 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0976 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0492 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_0214 putative quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Thivi_0840 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thivi_1100 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Thivi_1101 biotin carboxylase, acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thivi_0915 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Thivi_3357 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Thivi_3358 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Thivi_3241 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D Thivi_3242 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D Thivi_3240 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:tvi00650] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3441 poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Thivi_3440 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE D Thivi_3435 3-oxoacyl-(acyl-carrier-protein) reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Thivi_2497 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Thivi_2777 menaquinone-dependent succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_4349 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_2776 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_4347 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_2778 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4351 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4350 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Thivi_3813 pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_3180 2-oxoacid:ferredoxin oxidoreductase, alpha subunit K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Thivi_1004 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_1003 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thivi_3257 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:tvi00660] D Thivi_1004 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_1003 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thivi_3257 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D Thivi_3357 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Thivi_3358 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Thivi_0250 isopropylmalate/homocitrate/citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Thivi_0924 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Thivi_0923 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Thivi_0922 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tvi00562] D Thivi_3149 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thivi_2630 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thivi_3909 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tvi00190] D Thivi_3912 NADH:ubiquinone oxidoreductase subunit 3 (chain A) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Thivi_3913 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Thivi_1056 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Thivi_3914 NADH:ubiquinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Thivi_1057 NADH:ubiquinone oxidoreductase 27 kD subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Thivi_3915 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Thivi_1058 NADH:ubiquinone oxidoreductase 49 kD subunit 7 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Thivi_3916 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Thivi_3917 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Thivi_3918 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Thivi_3919 NADH:ubiquinone oxidoreductase subunit 1 (chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Thivi_1055 formate hydrogenlyase subunit 4 K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Thivi_1061 hypothetical protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Thivi_3920 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Thivi_3921 NADH:ubiquinone oxidoreductase subunit 6 (chain J) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Thivi_3922 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Thivi_3923 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Thivi_3924 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Thivi_3925 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Thivi_1125 NADH:ubiquinone oxidoreductase 24 kD subunit K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Thivi_1126 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K05587 hoxF; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Thivi_1128 NADH:ubiquinone oxidoreductase chain G-like protein K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2] D Thivi_2777 menaquinone-dependent succinate dehydrogenase/fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_4349 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Thivi_2776 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_4347 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Thivi_2778 succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4351 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Thivi_4350 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Thivi_3744 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Thivi_0859 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Thivi_3745 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thivi_3746 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Thivi_1047 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Thivi_1046 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Thivi_1045 Cbb3-type cytochrome oxidase component FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Thivi_1044 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Thivi_0258 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Thivi_0257 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Thivi_0256 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Thivi_1970 Cache domain protein K08738 CYC; cytochrome c D Thivi_3701 Cache domain protein K08738 CYC; cytochrome c D Thivi_2594 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Thivi_2592 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Thivi_2593 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Thivi_2595 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Thivi_2591 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Thivi_2598 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thivi_2596 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thivi_2597 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Thivi_1779 archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Thivi_3984 archaeal/vacuolar-type H+-ATPase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Thivi_0219 archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Thivi_1786 archaeal/vacuolar-type H+-ATPase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Thivi_1774 archaeal/vacuolar-type H+-ATPase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Thivi_1788 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Thivi_3989 H(+)-transporting ATP synthase, vacuolar type, subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Thivi_1778 archaeal/vacuolar-type H+-ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Thivi_3986 hypothetical protein K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Thivi_1775 archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Thivi_3988 archaeal/vacuolar-type H+-ATPase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Thivi_1776 thiol:disulfide interchange protein K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Thivi_3987 ATP synthase subunit C K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Thivi_3379 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Thivi_3572 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Thivi_0975 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Thivi_3663 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms [PATH:tvi00710] D Thivi_1570 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_1992 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_4238 ribulose 1,5-bisphosphate carboxylase, large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Thivi_1571 ribulose bisphosphate carboxylase small subunit K01602 rbcS; ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39] D Thivi_2344 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thivi_2347 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thivi_2341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_3122 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_3123 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_2348 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_4240 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Thivi_1925 phosphoribulokinase K00855 PRK; phosphoribulokinase [EC:2.7.1.19] D Thivi_3909 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thivi_3477 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Thivi_2806 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thivi_3053 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D Thivi_2510 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Thivi_2539 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:tvi00680] D Thivi_4476 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D Thivi_1030 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thivi_1421 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_1523 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_1024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thivi_2806 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Thivi_2341 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_3381 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Thivi_3111 heterodisulfide reductase, subunit B K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thivi_3112 heterodisulfide reductase, subunit C K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Thivi_0977 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0491 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0976 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0492 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_1903 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Thivi_4328 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thivi_2122 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thivi_0640 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2121 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_0217 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:tvi00910] D Thivi_4245 periplasmic nitrate reductase subunit NapA apoprotein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Thivi_4242 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D Thivi_3685 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Thivi_3648 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Thivi_1645 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thivi_3649 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thivi_3647 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Thivi_3818 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D Thivi_1285 hypothetical protein K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D Thivi_1727 Cytochrome c552 K10535 hao; hydroxylamine dehydrogenase [EC:1.7.2.6] D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_2860 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Thivi_2861 NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Thivi_2974 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Thivi_4491 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] D Thivi_1754 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tvi00920] D Thivi_0893 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thivi_3983 adenylylsulfate kinase ApsK K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Thivi_3299 dissimilatory adenylylsulfate reductase alpha subunit precursor K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D Thivi_3300 dissimilatory adenylylsulfate reductase beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D Thivi_1407 phosphoadenosine phosphosulfate reductase, thioredoxin dependent K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Thivi_4531 anaerobic dehydrogenase, typically selenocysteine-containing K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6] D Thivi_4532 Fe-S-cluster-containing hydrogenase subunit K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB D Thivi_4533 DMSO reductase anchor subunit K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC D Thivi_3803 diheme cytochrome SoxA (sulfur oxidation) K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Thivi_3804 cytochrome c553 K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Thivi_3138 putative secreted protein K17226 soxY; sulfur-oxidizing protein SoxY D Thivi_3139 sulfur compound chelating protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D Thivi_2200 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D Thivi_1405 sulfite reductase (NADPH) flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D Thivi_1406 sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Thivi_0544 dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Thivi_0545 dissimilatory sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Thivi_0552 NADPH-dependent glutamate synthase beta chain-like oxidoreductase K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit D Thivi_0550 nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D Thivi_0551 Fe-S oxidoreductase K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D Thivi_0553 hypothetical protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D Thivi_0554 Fe-S-cluster-containing hydrogenase subunit K27190 dsrO; [DsrC]-trisulfide reductase subunit O D Thivi_0555 polysulfide reductase K27191 dsrP; [DsrC]-trisulfide reductase subunit P D Thivi_0965 Pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Thivi_3129 NADH dehydrogenase, FAD-containing subunit K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D Thivi_1725 NADH dehydrogenase, FAD-containing subunit K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Thivi_1812 NAD(FAD)-dependent dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Thivi_1815 NAD(FAD)-dependent dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Thivi_4480 NAD(FAD)-dependent dehydrogenase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Thivi_4481 cytochrome c553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase D Thivi_1816 cytochrome c553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase D Thivi_1726 cytochrome c553 K17230 fccA; cytochrome subunit of sulfide dehydrogenase D Thivi_1637 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Thivi_3143 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Thivi_1669 homoserine trans-succinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Thivi_0657 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tvi00061] D Thivi_0840 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Thivi_1100 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Thivi_1101 biotin carboxylase, acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Thivi_0915 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Thivi_0019 acyl carrier protein K02078 acpP; acyl carrier protein D Thivi_2247 acyl carrier protein K02078 acpP; acyl carrier protein D Thivi_0017 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Thivi_0016 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Thivi_2254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Thivi_0020 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thivi_0018 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_3267 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_1007 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Thivi_2756 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_2250 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_0978 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_0899 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_0989 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3753 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tvi00071] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_0989 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3753 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3619 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tvi00561] D Thivi_1024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Thivi_0015 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Thivi_4078 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thivi_2829 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Thivi_1843 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Thivi_3043 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:tvi00564] D Thivi_2790 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Thivi_4285 Fe-S oxidoreductase K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D Thivi_4078 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thivi_2829 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Thivi_1843 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Thivi_1372 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Thivi_3619 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Thivi_2750 CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Thivi_3292 putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Thivi_1124 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Thivi_1328 phosphatidylserine decarboxylase precursor K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Thivi_4366 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D Thivi_2917 HAD-superfamily subfamily IB hydrolase, TIGR01490 K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D Thivi_2219 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Thivi_1138 phosphatidylglycerophosphate synthase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] D Thivi_0519 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase K13622 btaA; S-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase D Thivi_0518 methylase involved in ubiquinone/menaquinone biosynthesis K13623 btaB; S-adenosylmethionine-diacylgycerolhomoserine-N-methlytransferase C 00565 Ether lipid metabolism [PATH:tvi00565] D Thivi_1372 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D Thivi_1372 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D Thivi_1372 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:tvi00592] D Thivi_1372 outer membrane phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 01040 Biosynthesis of unsaturated fatty acids [PATH:tvi01040] D Thivi_3472 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Thivi_3131 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tvi00230] D Thivi_2508 ADP-ribose pyrophosphatase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_4178 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Thivi_0656 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Thivi_1115 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Thivi_1140 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Thivi_4354 phosphoribosylformylglycinamidine synthase, single chain form K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Thivi_1139 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Thivi_3320 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Thivi_3319 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Thivi_4149 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Thivi_1893 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Thivi_1112 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thivi_4449 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Thivi_3962 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Thivi_1901 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thivi_0481 5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thivi_2507 haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D Thivi_2281 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Thivi_3364 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Thivi_3162 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Thivi_2265 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Thivi_2731 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thivi_3328 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Thivi_2268 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Thivi_3324 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Thivi_3117 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thivi_2276 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Thivi_1855 oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Thivi_2924 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thivi_3322 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thivi_3574 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Thivi_3687 (p)ppGpp synthetase, RelA/SpoT family K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Thivi_0948 family 3 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Thivi_4325 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Thivi_0416 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Thivi_0620 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] D Thivi_0804 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thivi_0500 putative phosphohydrolase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D Thivi_0467 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Thivi_3983 adenylylsulfate kinase ApsK K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D Thivi_0893 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thivi_2083 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thivi_2084 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thivi_2085 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:tvi00240] D Thivi_1769 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thivi_1770 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Thivi_3314 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Thivi_0236 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Thivi_3315 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Thivi_3812 dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D Thivi_3003 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Thivi_3334 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Thivi_0535 orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Thivi_2747 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Thivi_2731 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thivi_0804 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thivi_4099 MAF protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Thivi_3969 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Thivi_0302 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Thivi_3962 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Thivi_1901 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thivi_0481 5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thivi_2281 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Thivi_3313 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Thivi_1855 oxygen-sensitive ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Thivi_3040 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Thivi_3117 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thivi_2276 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D Thivi_0023 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Thivi_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Thivi_4329 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tvi00250] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_0600 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Thivi_4097 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Thivi_1867 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_3680 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_1740 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_4063 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_4250 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_2666 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thivi_2221 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thivi_0416 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Thivi_1893 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Thivi_3314 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Thivi_2860 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Thivi_2861 NADH/NADPH-dependent glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_1769 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Thivi_1770 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Thivi_1403 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Thivi_1928 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thivi_0656 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tvi00260] D Thivi_0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thivi_0921 aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thivi_0004 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thivi_0249 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Thivi_1030 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thivi_1421 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_1523 lactate dehydrogenase-like oxidoreductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Thivi_1024 putative glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Thivi_4328 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Thivi_2122 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thivi_0640 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2121 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_0217 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Thivi_1840 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Thivi_1842 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Thivi_1838 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_1839 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Thivi_1124 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Thivi_3675 threonine ammonia-lyase, biosynthetic, long form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Thivi_0916 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Thivi_0917 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thivi_0558 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thivi_4128 PLP-dependent enzyme, glutamate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] D Thivi_2187 PLP-dependent enzyme, glutamate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86] C 00270 Cysteine and methionine metabolism [PATH:tvi00270] D Thivi_1637 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Thivi_3143 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Thivi_1704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Thivi_1686 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Thivi_2350 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thivi_3595 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thivi_2915 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_3471 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_0796 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_4450 purine nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Thivi_3364 uncharacterized protein, YfiH family K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Thivi_3342 cytosine deaminase-like metal-dependent hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Thivi_3164 purine nucleoside phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Thivi_3343 S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Thivi_3125 ribulose 1,5-bisphosphate carboxylase, large subunit K25035 rlp; S-methyl-5-thioribulose 1-phosphate isomerase [EC:5.3.3.23] D Thivi_3579 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thivi_0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thivi_0921 aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thivi_0004 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thivi_1669 homoserine trans-succinylase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D Thivi_4020 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Thivi_0657 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Thivi_0737 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thivi_3368 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Thivi_3308 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_1201 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Thivi_2122 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thivi_0640 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2121 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:tvi00280] D Thivi_0737 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3087 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tvi00290] D Thivi_3675 threonine ammonia-lyase, biosynthetic, long form K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Thivi_0250 isopropylmalate/homocitrate/citramalate synthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Thivi_0924 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Thivi_0923 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Thivi_0922 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Thivi_1004 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_1003 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thivi_0995 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Thivi_1905 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Thivi_0737 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thivi_3771 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Thivi_4590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tvi00300] D Thivi_0004 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Thivi_0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thivi_0921 aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thivi_3926 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Thivi_4599 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Thivi_2609 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Thivi_1869 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thivi_2607 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Thivi_2611 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Thivi_2388 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Thivi_2386 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Thivi_3779 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thivi_2323 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tvi00310] D Thivi_3854 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:tvi00220] D Thivi_1870 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Thivi_2666 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thivi_2221 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thivi_2083 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thivi_2084 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thivi_2085 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Thivi_1392 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D Thivi_1403 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_3577 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Thivi_2308 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Thivi_2715 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Thivi_3082 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Thivi_1869 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thivi_2217 acetylornithine deacetylase ArgE K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:tvi00330] D Thivi_2693 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D Thivi_0843 putative amidohydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D Thivi_2915 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_3471 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_0796 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_3595 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Thivi_3330 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Thivi_2542 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Thivi_0983 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Thivi_2071 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:tvi00340] D Thivi_1269 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Thivi_3228 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Thivi_0415 ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Thivi_2531 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Thivi_2532 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Thivi_2533 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Thivi_3177 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K01663 HIS7; imidazole glycerol-phosphate synthase [EC:4.3.2.10] D Thivi_2534 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3226 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D Thivi_3281 putative methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:tvi00350] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00360 Phenylalanine metabolism [PATH:tvi00360] D Thivi_2394 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Thivi_2396 coenzyme F390 synthetase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Thivi_2827 hypothetical protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_1729 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Thivi_4494 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Thivi_0845 ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component D Thivi_0520 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00380 Tryptophan metabolism [PATH:tvi00380] D Thivi_3854 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_1729 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Thivi_4494 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tvi00400] D Thivi_2772 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Thivi_2859 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Thivi_1099 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Thivi_3088 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Thivi_2858 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Thivi_0303 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Thivi_1751 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Thivi_3479 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thivi_3590 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Thivi_3591 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Thivi_0918 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Thivi_3592 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Thivi_0916 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Thivi_0917 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thivi_0558 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Thivi_2123 chorismate mutase, clade 2 K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Thivi_2125 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_2245 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tvi00410] D Thivi_0100 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Thivi_0099 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:tvi00430] D Thivi_2993 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thivi_0976 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0492 phosphotransacetylase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D Thivi_0977 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Thivi_0491 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tvi00450] D Thivi_1704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Thivi_1686 methionine synthase (B12-independent) K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Thivi_1413 cysteine desulfurase-like protein, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D Thivi_0943 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Thivi_0893 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thivi_3353 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tvi00460] D Thivi_0269 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_4497 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_2993 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thivi_1030 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tvi00470] D Thivi_3766 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thivi_2316 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thivi_1403 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Thivi_3789 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Thivi_2321 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thivi_4097 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D Thivi_2388 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Thivi_2386 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tvi00480] D Thivi_2993 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thivi_3368 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Thivi_3308 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Thivi_1805 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Thivi_0728 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thivi_1883 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thivi_1955 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Thivi_4572 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Thivi_4625 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Thivi_0103 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Thivi_0890 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Thivi_2915 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_3471 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Thivi_0796 putative spermidine synthase with an N-terminal membrane domain K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D Thivi_0879 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0880 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tvi00540] D Thivi_2757 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thivi_1113 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thivi_2312 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Thivi_2755 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thivi_2212 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thivi_2703 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Thivi_2758 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Thivi_3808 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Thivi_2229 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Thivi_3970 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Thivi_2230 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Thivi_3809 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Thivi_2103 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thivi_4585 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Thivi_3140 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Thivi_4046 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thivi_2615 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thivi_2101 D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D Thivi_2830 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Thivi_4045 putative kinase, galactokinase/mevalonate kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] D Thivi_4047 Nucleoside-diphosphate-sugar pyrophosphorylase family protein K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71] D Thivi_2482 ADP-heptose:LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Thivi_2483 lipid A core-O-antigen ligase-like enyme K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tvi00541] D Thivi_0536 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Thivi_4343 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Thivi_4182 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Thivi_2513 nucleoside-diphosphate-sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Thivi_3705 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thivi_3704 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thivi_3706 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_0885 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_3707 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Thivi_0887 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Thivi_0886 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Thivi_3871 2-polyprenylphenol hydroxylase-like oxidoreductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Thivi_0752 flavodoxin reductase family protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Thivi_2629 mannose-1-phosphate guanylyltransferase (GDP), mannose-6-phosphate isomerase, type 2 K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Thivi_3375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D Thivi_2589 glucosamine-1-phosphate N-acetyltransferase, UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Thivi_4284 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Thivi_4283 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Thivi_2178 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Thivi_2375 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D Thivi_2177 nucleoside-diphosphate-sugar epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-] C 00550 Peptidoglycan biosynthesis [PATH:tvi00550] D Thivi_3229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thivi_2317 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thivi_2318 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Thivi_2321 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thivi_3779 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thivi_2316 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thivi_2323 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Thivi_2749 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Thivi_1364 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_3774 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_2322 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thivi_2319 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Thivi_0690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_3288 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_0691 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thivi_3347 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Thivi_2500 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Thivi_3829 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Thivi_2324 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Thivi_2434 cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D Thivi_3833 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Thivi_1920 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:tvi00552] D Thivi_1364 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_3774 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_3043 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tvi00543] D Thivi_1637 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Thivi_3143 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tvi00730] D Thivi_3455 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Thivi_3078 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Thivi_0485 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thivi_1568 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Thivi_2898 putative enzyme of thiazole biosynthesis K03149 thiG; thiazole synthase [EC:2.8.1.10] D Thivi_3077 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Thivi_1037 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Thivi_1656 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Thivi_4069 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Thivi_0620 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tvi00740] D Thivi_1034 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Thivi_1032 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Thivi_3841 haloacid dehalogenase superfamily enzyme, subfamily IA K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D Thivi_1035 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Thivi_1033 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Thivi_3345 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Thivi_3617 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tvi00750] D Thivi_3994 Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D Thivi_0640 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2121 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_1123 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Thivi_0612 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Thivi_0249 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tvi00760] D Thivi_0600 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Thivi_3954 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Thivi_3094 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Thivi_3962 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D Thivi_1901 5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D Thivi_0481 5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Thivi_0963 nicotinate/nicotinamide nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Thivi_0804 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thivi_3360 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D Thivi_0748 competence/damage-inducible protein CinA-like protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Thivi_4594 putative sugar kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Thivi_3370 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D Thivi_1358 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Thivi_1359 NAD/NADP transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Thivi_1357 NAD/NADP transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:tvi00770] D Thivi_1004 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_2146 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Thivi_1003 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Thivi_0995 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Thivi_1905 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Thivi_0098 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Thivi_3844 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Thivi_0099 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Thivi_0686 pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Thivi_2718 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Thivi_0804 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D Thivi_2995 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Thivi_0239 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Thivi_0005 phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Thivi_0737 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thivi_0100 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tvi00780] D Thivi_1765 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Thivi_2254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Thivi_0020 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thivi_0018 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_3267 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_2756 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_2250 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_0978 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_0899 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_1764 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Thivi_1763 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Thivi_4332 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Thivi_1766 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Thivi_1762 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Thivi_0684 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tvi00785] D Thivi_3835 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Thivi_1990 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3407 pyruvate dehydrogenase E1 component, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Thivi_3406 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Thivi_3855 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Thivi_3854 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Thivi_1840 glycine cleavage system protein P K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D Thivi_1842 glycine cleavage system protein P K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D Thivi_1838 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Thivi_1839 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tvi00790] D Thivi_0994 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D Thivi_4013 hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Thivi_1026 NTP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Thivi_4077 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Thivi_1687 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Thivi_0872 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Thivi_0689 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Thivi_0961 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Thivi_0914 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Thivi_1034 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Thivi_3090 aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D Thivi_0021 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D Thivi_0093 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thivi_3266 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thivi_0094 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Thivi_0092 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Thivi_1804 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Thivi_3052 metal-dependent hydrolase, beta-lactamase superfamily II K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Thivi_1329 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Thivi_3378 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Thivi_2904 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Thivi_2588 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Thivi_2587 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Thivi_1755 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tvi00670] D Thivi_0961 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Thivi_3625 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Thivi_1030 glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Thivi_1140 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Thivi_1112 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thivi_3197 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Thivi_1838 glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Thivi_1704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Thivi_4329 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Thivi_3583 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Thivi_3390 5,10-methenyltetrahydrofolate synthetase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tvi00860] D Thivi_3840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thivi_4174 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Thivi_3076 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Thivi_3089 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Thivi_3884 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Thivi_3883 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Thivi_2894 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Thivi_3474 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Thivi_0626 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Thivi_2400 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Thivi_2837 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D Thivi_1624 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Thivi_2162 uroporphyrinogen-III C-methyltransferase, precorrin-2 dehydrogenase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D Thivi_1682 precorrin-2 C20-methyltransferase, cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Thivi_1681 precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131] D Thivi_1677 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Thivi_1698 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Thivi_1710 precorrin-6A synthase, deacetylating K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D Thivi_1680 precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D Thivi_1684 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit,precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Thivi_1683 precorrin isomerase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Thivi_1697 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Thivi_0556 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing), cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Thivi_0576 ATPase family protein associated with various cellular activities (AAA) K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D Thivi_1487 ATPase family protein associated with various cellular activities (AAA) K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D Thivi_1610 ATPase family protein associated with various cellular activities (AAA) K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D Thivi_0579 nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D Thivi_1708 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Thivi_1015 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Thivi_1675 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Thivi_3210 L-threonine O-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D Thivi_1703 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Thivi_0718 cobalamin-5-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Thivi_1672 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Thivi_0717 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Thivi_2773 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Thivi_1671 fructose-2,6-bisphosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Thivi_2408 cobaltochelatase CobN subunit K03403 chlH; magnesium chelatase subunit H [EC:6.6.1.1] D Thivi_1845 protoporphyrin IX magnesium-chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Thivi_1846 protoporphyrin IX magnesium-chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D Thivi_2406 Mg-protoporphyrin IX methyltransferase K03428 bchM; magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11] D Thivi_1709 anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3] D Thivi_2401 anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase K04034 bchE; anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:1.21.98.3] D Thivi_1847 coenzyme F420-reducing hydrogenase, beta subunit K21231 bciB; 3,8-divinyl protochlorophyllide a 8-vinyl-reductase (ferredoxin) [EC:1.3.7.13] D Thivi_2399 bacteriochlorophyll 4-vinyl reductase K04036 bchJ; divinyl protochlorophyllide a 8-vinyl-reductase [EC:1.-.-.-] D Thivi_2407 ferredoxin protochlorophyllide reductase subunit L K04037 chlL; light-independent protochlorophyllide reductase subunit L [EC:1.3.7.7] D Thivi_2410 ferredoxin protochlorophyllide reductase subunit N K04038 chlN; light-independent protochlorophyllide reductase subunit N [EC:1.3.7.7] D Thivi_2409 ferredoxin protochlorophyllide reductase subunit B K04039 chlB; light-independent protochlorophyllide reductase subunit B [EC:1.3.7.7] D Thivi_2413 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] D Thivi_2011 chlorophyllide reductase iron protein subunit X K11333 bchX; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit X [EC:1.3.7.14 1.3.7.15] D Thivi_2010 chlorophyllide reductase subunit Y K11334 bchY; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Y [EC:1.3.7.14 1.3.7.15] D Thivi_2003 chlorophyllide reductase subunit Z K11335 bchZ; 3,8-divinyl chlorophyllide a/chlorophyllide a reductase subunit Z [EC:1.3.7.14 1.3.7.15] D Thivi_2411 2-vinyl bacteriochlorophyllide hydratase K11336 bchF; 3-vinyl bacteriochlorophyllide hydratase [EC:4.2.1.165] D Thivi_2012 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase K11337 bchC; bacteriochlorophyllide a dehydrogenase [EC:1.1.1.396] D Thivi_2414 geranylgeranyl reductase family protein K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tvi00130] D Thivi_2245 hypothetical protein K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D Thivi_4155 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Thivi_3866 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Thivi_3617 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Thivi_3383 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Thivi_1029 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Thivi_0754 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Thivi_3384 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Thivi_1732 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Thivi_2246 methylase involved in ubiquinone/menaquinone biosynthesis K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Thivi_3596 ubiquinone biosynthesis protein COQ7 K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Thivi_3156 isochorismate synthase family protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Thivi_3155 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Thivi_4014 putative hydrolase or acyltransferase of alpha/beta superfamily K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D Thivi_2435 o-succinylbenzoic acid synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Thivi_2398 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Thivi_2437 dihydroxynaphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Thivi_1876 putative thioesterase K12073 E3.1.2.28; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Thivi_2436 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Thivi_1136 NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tvi00900] D Thivi_1568 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Thivi_2751 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Thivi_3977 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Thivi_4176 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Thivi_0503 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Thivi_0806 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Thivi_4529 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3617 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Thivi_1991 isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Thivi_2014 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thivi_4010 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thivi_2546 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Thivi_2749 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Thivi_2414 geranylgeranyl reductase family protein K10960 chlP; geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [EC:1.3.1.83 1.3.1.111] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:tvi00906] D Thivi_2024 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Thivi_2025 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D Thivi_2016 hydroxyneurosporene synthase K09844 crtC; carotenoid 1,2-hydratase [EC:4.2.1.131] D Thivi_2015 phytoene desaturase K09845 crtD; 1-hydroxycarotenoid 3,4-desaturase [EC:1.3.99.27] D Thivi_2013 methylase involved in ubiquinone/menaquinone biosynthesis K09846 crtF; demethylspheroidene O-methyltransferase [EC:2.1.1.210] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Thivi_3122 transketolase, beta subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_3123 transketolase, alpha subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Thivi_2348 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tvi00523] D Thivi_3705 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thivi_3704 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thivi_3706 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_0885 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_3707 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures [PATH:tvi01054] D Thivi_4097 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides D Thivi_3156 isochorismate synthase family protein K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D Thivi_3704 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:tvi00946] D Thivi_0269 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_4497 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:tvi00311] D Thivi_2764 acetyl esterase (deacetylase) K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41] D Thivi_3473 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:tvi00332] D Thivi_2542 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Thivi_0983 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tvi00261] D Thivi_0893 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Thivi_0743 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Thivi_0921 aspartate-semialdehyde dehydrogenase, gamma-proteobacterial K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Thivi_3926 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Thivi_4599 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tvi00521] D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Thivi_0618 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Thivi_3149 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thivi_2630 inositol monophosphatase/fructose-1,6-bisphosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Thivi_3705 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thivi_3704 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Thivi_3706 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_0885 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Thivi_3707 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Thivi_4581 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:tvi00525] D Thivi_3705 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Thivi_3704 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tvi00401] D Thivi_2125 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Thivi_3479 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thivi_3590 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Thivi_0017 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Thivi_0018 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_3267 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_0978 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_0899 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Thivi_0019 acyl carrier protein K02078 acpP; acyl carrier protein D Thivi_2247 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tvi00999] D Thivi_2350 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Thivi_3088 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Thivi_0269 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] D Thivi_4497 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tvi00362] D Thivi_0520 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Thivi_2497 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:tvi00627] D Thivi_1134 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Thivi_3617 polyprenyl p-hydroxybenzoate/phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Thivi_0431 hypothetical protein K01865 hab; (hydroxyamino)benzene mutase [EC:5.4.4.1] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D Thivi_1645 nitrogenase molybdenum-iron protein, alpha and beta chains K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thivi_3649 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Thivi_3647 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH D Thivi_3648 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D Thivi_0520 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00633 Nitrotoluene degradation [PATH:tvi00633] D Thivi_2274 NADH:flavin oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D Thivi_3939 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_3759 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_2701 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_1303 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_3936 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_3760 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_2698 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_1306 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_3696 coenzyme F420-reducing hydrogenase, alpha subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Thivi_0544 dissimilatory sulfite reductase alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Thivi_0545 dissimilatory sulfite reductase beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Thivi_0552 NADPH-dependent glutamate synthase beta chain-like oxidoreductase K27196 dsrL; dissimilatory sulfite reductase flavoprotein subunit C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D Thivi_2083 urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Thivi_2084 urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Thivi_2085 urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D Thivi_0520 isopropylmalate/homocitrate/citramalate synthase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tvi03020] D Thivi_4194 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thivi_4195 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thivi_4226 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thivi_3323 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tvi03010] D Thivi_0301 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Thivi_2846 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Thivi_2745 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Thivi_4207 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Thivi_4225 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Thivi_4218 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Thivi_1185 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Thivi_4197 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Thivi_4215 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Thivi_3600 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Thivi_4200 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Thivi_4224 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Thivi_4196 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Thivi_4223 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Thivi_4214 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Thivi_3171 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Thivi_4317 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Thivi_4210 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Thivi_1184 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Thivi_4205 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Thivi_0475 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Thivi_4081 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Thivi_4191 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Thivi_4204 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Thivi_4201 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Thivi_4202 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Thivi_4213 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Thivi_4216 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Thivi_4193 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Thivi_1182 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Thivi_4192 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Thivi_4190 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Thivi_3599 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Thivi_4211 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Thivi_4220 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Thivi_4208 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Thivi_4227 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Thivi_4217 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Thivi_4320 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Thivi_1562 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Thivi_2545 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Thivi_4206 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Thivi_4203 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Thivi_4212 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Thivi_4179 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Thivi_2544 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Thivi_3270 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Thivi_4209 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Thivi_4219 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Thivi_2848 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Thivi_0014 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Thivi_3271 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Thivi_1563 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Thivi_4222 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Thivi_1910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_4022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_2652 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_1907 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_4025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_2649 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_1906 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_2648 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_4026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tvi00970] D Thivi_1908 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_4024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_2650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_0991 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_1919 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_0803 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_1353 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_2361 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_4492 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_3549 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Thivi_0633 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Thivi_2433 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Thivi_3601 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thivi_4177 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thivi_0990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thivi_0095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thivi_4367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_3752 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_4184 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_1352 tRNA-His K14226 tRNA-His; tRNA His D Thivi_1909 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_2651 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_4023 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_3911 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_0517 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3645 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3799 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_1351 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thivi_4448 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thivi_2468 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_4085 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_4603 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_2662 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Thivi_1354 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_1557 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_2547 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_0569 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_0741 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_2890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_0230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_1577 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_1593 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_4185 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_0199 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_4187 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Thivi_4183 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Thivi_0632 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_1566 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_2420 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_3840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thivi_3824 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Thivi_3434 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Thivi_3825 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Thivi_2430 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Thivi_0744 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thivi_1027 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thivi_2832 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thivi_2831 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thivi_1565 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thivi_0925 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thivi_2079 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thivi_3353 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thivi_3197 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Thivi_3494 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thivi_0986 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thivi_3223 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thivi_1311 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thivi_3794 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thivi_1006 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thivi_2727 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thivi_1561 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thivi_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thivi_3085 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thivi_1149 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tvi03060] D Thivi_4221 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Thivi_4188 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thivi_3910 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Thivi_3127 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Thivi_3128 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Thivi_3126 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Thivi_3007 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thivi_2309 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thivi_2789 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Thivi_1917 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thivi_2714 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Thivi_2986 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thivi_0059 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0088 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0087 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Thivi_1914 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Thivi_0607 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Thivi_3220 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tvi04122] D Thivi_0485 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thivi_2160 putative redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thivi_0548 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Thivi_0547 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Thivi_0546 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Thivi_1716 sulfur relay protein, TusE/DsrC/DsvC family K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Thivi_4545 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thivi_2904 molybdopterin converting factor, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Thivi_1329 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Thivi_2586 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D Thivi_4165 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Thivi_3378 molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Thivi_2588 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Thivi_2899 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:tvi03018] D Thivi_3621 NTP pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Thivi_2191 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Thivi_2506 DNA/RNA helicase, superfamily II K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thivi_3172 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Thivi_0681 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Thivi_0516 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thivi_3755 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Thivi_2116 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Thivi_2504 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_4597 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thivi_0712 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0409 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Thivi_3572 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Thivi_0975 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Thivi_3663 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Thivi_0096 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tvi03030] D Thivi_0245 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_3967 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_1064 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thivi_2713 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thivi_0024 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thivi_0984 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thivi_1008 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Thivi_2842 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thivi_1181 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Thivi_4083 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_3966 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Thivi_2759 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tvi03410] D Thivi_3372 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Thivi_2428 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Thivi_3751 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Thivi_3676 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Thivi_3772 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Thivi_1972 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_0758 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tvi03420] D Thivi_1226 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Thivi_2472 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thivi_0512 UvrA family protein K03701 uvrA; excinuclease ABC subunit A D Thivi_2618 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Thivi_4365 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Thivi_2845 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Thivi_4230 ERCC4-type nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] C 03430 Mismatch repair [PATH:tvi03430] D Thivi_3738 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Thivi_4001 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Thivi_2845 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thivi_4321 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Thivi_2263 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Thivi_4009 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Thivi_0758 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_1064 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thivi_2842 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thivi_2713 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thivi_0984 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thivi_0024 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thivi_0245 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_3967 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_1008 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tvi03440] D Thivi_0758 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_0611 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Thivi_2711 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Thivi_0746 protein RecA K03553 recA; recombination protein RecA D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_0672 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Thivi_1575 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Thivi_0671 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Thivi_3904 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_1474 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_4154 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_2028 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Thivi_2029 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Thivi_2027 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Thivi_1064 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thivi_2842 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thivi_2713 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thivi_0984 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thivi_0024 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thivi_0245 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_3967 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_1008 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Thivi_3795 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D Thivi_0879 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0880 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tvi02010] D Thivi_1742 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D Thivi_3450 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thivi_2523 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thivi_3451 ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein D Thivi_2522 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Thivi_3452 ABC-type spermidine/putrescine transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thivi_2521 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thivi_1337 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Thivi_1338 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Thivi_1339 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Thivi_3176 spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D Thivi_3173 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D Thivi_3174 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D Thivi_3175 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Thivi_0477 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Thivi_0476 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Thivi_3231 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D Thivi_3232 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thivi_3254 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thivi_3233 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thivi_3252 ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thivi_3230 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D Thivi_3234 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thivi_3253 ABC-type metal ion transport system, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thivi_0967 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0971 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0973 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_3045 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_1368 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_4109 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0970 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Thivi_3046 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Thivi_0969 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Thivi_3047 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Thivi_0968 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thivi_3048 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thivi_3660 amino acid ABC transporter substrate-binding protein, PAAT family K09969 aapJ; general L-amino acid transport system substrate-binding protein D Thivi_2092 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Thivi_2091 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Thivi_2090 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Thivi_2089 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Thivi_2087 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Thivi_2515 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Thivi_3263 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Thivi_3262 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Thivi_1166 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D Thivi_1168 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Thivi_1169 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Thivi_1165 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein D Thivi_1167 hypothetical protein K16915 cbiL; nickel transport protein D Thivi_0121 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_2677 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_4034 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_2678 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_0125 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_4038 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_0725 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Thivi_0724 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Thivi_3058 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D Thivi_3059 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C D Thivi_3062 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Thivi_3063 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Thivi_0726 putative permease K07091 lptF; lipopolysaccharide export system permease protein D Thivi_1806 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Thivi_2233 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Thivi_2984 cell division protein K09811 ftsX; cell division transport system permease protein D Thivi_2985 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thivi_3807 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Thivi_2464 fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Thivi_1940 type I secretion system ABC transporter, PrtD family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Thivi_4311 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Thivi_4312 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Thivi_4498 ABC-type uncharacterized transport system, permease and ATPase component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:tvi02060] D Thivi_2242 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Thivi_2241 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D Thivi_0263 PTS system D-glucose-specific IIC component, Glc family K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Thivi_2240 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thivi_0264 phosphotransferase system HPr (HPr) family protein K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D Thivi_3622 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Thivi_2237 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:tvi03070] D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_2865 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Thivi_2828 type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D Thivi_0119 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D Thivi_2873 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Thivi_2872 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Thivi_2871 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D Thivi_2870 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D Thivi_2869 type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D Thivi_2868 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D Thivi_2867 General secretion pathway protein M K02462 gspM; general secretion pathway protein M D Thivi_3002 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Thivi_3127 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Thivi_3128 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Thivi_4188 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thivi_3910 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Thivi_4221 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Thivi_3126 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Thivi_3007 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thivi_2309 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thivi_2986 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thivi_2789 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Thivi_1917 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thivi_0059 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0088 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0087 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Thivi_1914 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D Thivi_2297 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Thivi_2288 hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D Thivi_2299 type VI secretion lipoprotein, VC_A0113 family K11906 vasD; type VI secretion system protein VasD D Thivi_2302 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D Thivi_2301 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D Thivi_2283 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D Thivi_3423 von Willebrand factor type A-like protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_4543 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_2298 FHA domain protein K11913 fha1; type VI secretion system protein B B 09132 Signal transduction C 02020 Two-component system [PATH:tvi02020] D Thivi_0295 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thivi_0294 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Thivi_2107 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Thivi_0560 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3 D Thivi_0967 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0971 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0973 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_3045 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_1368 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_4109 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_4336 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Thivi_4335 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D Thivi_3691 Peroxiredoxin K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Thivi_3692 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Thivi_0605 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_4276 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_1899 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Thivi_1898 putative silver efflux pump K07787 cusA; copper/silver efflux system protein D Thivi_0776 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0876 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_3150 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0375 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thivi_0382 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0352 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D Thivi_2208 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0076 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Thivi_0083 K+-transporting ATPase, KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Thivi_0082 K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Thivi_0081 K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Thivi_2843 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thivi_2222 response regulator of the LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Thivi_2465 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_4248 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_4249 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Thivi_2466 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Thivi_0742 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D Thivi_2743 (protein-PII) uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Thivi_3361 nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1 D Thivi_2795 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Thivi_2794 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_3194 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thivi_3193 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Thivi_3392 Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D Thivi_3949 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3289 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thivi_3578 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D Thivi_2234 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Thivi_0799 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_2485 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_3696 coenzyme F420-reducing hydrogenase, alpha subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Thivi_3936 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_3760 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_2698 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_1306 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Thivi_3939 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_3759 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_2701 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_1303 Ni,Fe-hydrogenase I large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Thivi_3758 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Thivi_0393 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0318 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0325 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_4119 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_1221 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_2988 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_2576 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_1222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0311 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0321 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0307 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0036 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0643 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1154 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4111 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4115 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4117 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1211 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1219 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2100 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2443 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0439 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2566 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0559 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3160 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Thivi_0384 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0312 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0322 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4116 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4118 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_1223 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0380 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0310 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0317 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0327 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_4114 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_1224 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0376 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0308 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0326 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0329 CheY-like receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_4112 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_1225 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0314 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0381 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0320 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0323 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_4121 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_1218 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0392 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Thivi_3304 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Thivi_3305 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D Thivi_3303 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Thivi_3307 response regulator containing a CheY-like receiver domain and a GGDEF domain K02657 pilG; twitching motility two-component system response regulator PilG D Thivi_3306 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D Thivi_2359 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_2380 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_3251 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_0849 PAS domain S-box K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_4079 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_0850 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Thivi_0356 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Thivi_3593 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_1186 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_3550 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_1403 L-glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D Thivi_1982 Antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain D Thivi_1986 Antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain D Thivi_1999 photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit D Thivi_2000 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit D Thivi_1980 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_1994 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_1996 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_2001 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_0278 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0281 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0284 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0274 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0276 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1987 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1985 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1981 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1983 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1995 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1997 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_2002 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_2405 photosynthetic reaction center, subunit H, bacterial K13991 puhA; photosynthetic reaction center H subunit D Thivi_3744 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Thivi_0859 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Thivi_3745 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thivi_3746 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Thivi_1970 Cache domain protein K08738 CYC; cytochrome c D Thivi_3701 Cache domain protein K08738 CYC; cytochrome c D Thivi_1047 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Thivi_1046 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Thivi_1045 Cbb3-type cytochrome oxidase component FixQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Thivi_1044 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Thivi_0258 cytochrome bd-type quinol oxidase, subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D Thivi_0257 cytochrome d oxidase cyd, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D Thivi_0256 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_4258 putative polysaccharide export protein, PEP-CTERM sytem-associated K01991 wza; polysaccharide biosynthesis/export protein D Thivi_2195 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Thivi_4284 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Thivi_4283 nucleotide sugar dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D Thivi_1315 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_1437 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_0649 HPt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D Thivi_1213 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Thivi_1214 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D Thivi_0390 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D Thivi_3744 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Thivi_0859 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tvi02024] D Thivi_0409 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Thivi_3479 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Thivi_3590 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Thivi_2023 glycosyl transferase, UDP-glucuronosyltransferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Thivi_2772 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Thivi_1864 spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Thivi_0989 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3753 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3593 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_1186 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_3550 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_3264 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Thivi_1032 diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Thivi_0901 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thivi_0902 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thivi_0903 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thivi_0898 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thivi_3007 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thivi_4188 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thivi_3910 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Thivi_4221 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Thivi_3126 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Thivi_2309 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thivi_2986 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thivi_2789 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Thivi_1917 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tvi02030] D Thivi_1222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0311 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0321 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0307 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0036 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0643 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1154 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4111 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4115 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4117 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1211 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1219 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2100 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2443 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0439 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2566 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0559 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3160 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Thivi_0380 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0310 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0317 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0327 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_4114 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_1224 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0384 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0312 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0322 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4116 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4118 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_1223 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0376 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0308 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0326 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0329 CheY-like receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_4112 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_1225 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0314 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0315 chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Thivi_0377 chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D Thivi_0381 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0320 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0323 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_4121 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_1218 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_2988 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_2576 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_0392 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Thivi_0319 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_4120 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_1220 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_0393 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0318 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0325 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_4119 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_1221 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0359 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thivi_0365 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thivi_0366 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thivi_0382 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0352 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D Thivi_2208 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0383 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0351 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_2209 flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tvi02040] D Thivi_0357 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Thivi_0358 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Thivi_0359 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thivi_0360 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D Thivi_0361 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thivi_0362 Flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D Thivi_0363 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Thivi_0364 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Thivi_1212 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Thivi_0365 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thivi_0366 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thivi_0367 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thivi_0368 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thivi_0369 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thivi_0370 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thivi_0372 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thivi_0371 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thivi_0391 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Thivi_0395 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Thivi_0396 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Thivi_0397 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Thivi_0398 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thivi_0399 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Thivi_0400 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Thivi_0401 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Thivi_0402 flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Thivi_0403 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Thivi_0404 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Thivi_0405 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Thivi_0776 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0876 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_3150 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0774 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Thivi_0772 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D Thivi_0382 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0352 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D Thivi_2208 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0383 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0351 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_2209 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0390 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D Thivi_0389 FlgN protein K02399 flgN; flagellar biosynthesis protein FlgN D Thivi_4084 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Thivi_0356 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Thivi_2234 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Thivi_0375 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D Thivi_1704 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tvi01501] D Thivi_3564 Major Facilitator Superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Thivi_3161 beta-glucosidase-like glycosyl hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Thivi_0437 release factor H-coupled RctB family protein K18148 rtcB; release factor H-coupled RctB family protein D Thivi_2767 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2799 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2802 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_4560 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2801 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_2766 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_4559 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_2798 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_0781 signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D Thivi_0782 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18144 adeR; two-component system, OmpR family, response regulator AdeR D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_0691 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thivi_3829 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Thivi_2324 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Thivi_1496 beta-lactamase class D K17838 oxa; beta-lactamase class D [EC:3.5.2.6] D Thivi_3027 beta-lactamase class D K17838 oxa; beta-lactamase class D [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:tvi01502] D Thivi_2316 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thivi_3766 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thivi_2323 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Thivi_2322 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thivi_2319 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tvi01503] D Thivi_4336 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Thivi_4335 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D Thivi_4000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thivi_0605 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_4276 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_1904 putative dithiol-disulfide isomerase involved in polyketide biosynthesis K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Thivi_4156 putative dithiol-disulfide isomerase involved in polyketide biosynthesis K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Thivi_2767 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2799 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2802 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_4560 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2801 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_2766 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_4559 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_2798 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_2757 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thivi_1113 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tvi01000] C 01001 Protein kinases [BR:tvi01001] D Thivi_3235 putative unusual protein kinase K08869 ADCK; aarF domain-containing kinase D Thivi_3767 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Thivi_3423 von Willebrand factor type A-like protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_4543 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_0749 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Thivi_3422 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Thivi_0334 anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Thivi_0333 anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Thivi_4092 anti-sigma regulatory factor (Ser/Thr protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Thivi_0522 uncharacterized protein involved in exopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Thivi_4256 exopolysaccharide/PEPCTERM locus tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Thivi_0295 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thivi_4336 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Thivi_3691 Peroxiredoxin K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Thivi_0076 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Thivi_0781 signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D Thivi_0033 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Thivi_4463 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Thivi_2465 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_4248 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_2795 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Thivi_3194 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thivi_3949 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Thivi_3289 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thivi_0380 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0310 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0317 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0327 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_4114 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_1224 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_3303 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Thivi_2359 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_2380 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_3251 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_0849 PAS domain S-box K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_4079 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_1315 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_1437 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_4303 signal transduction histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS D Thivi_0064 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_3770 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1831 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1009 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_3991 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1203 response regulator containing a CheY-like receiver domain and a GGDEF domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1205 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1206 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1215 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_4164 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_2573 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_0647 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_0673 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tvi01009] D Thivi_3579 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Thivi_1517 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Thivi_2037 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Thivi_2054 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Thivi_3726 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Thivi_0217 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:tvi01002] D Thivi_3220 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D Thivi_0240 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thivi_3940 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thivi_3757 hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thivi_4358 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thivi_1132 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Thivi_2268 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Thivi_0656 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Thivi_2860 glutamate synthase family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Thivi_1928 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Thivi_1867 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_3680 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_1740 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_4063 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_4250 asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Thivi_2784 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D Thivi_2970 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Thivi_0235 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D Thivi_2223 CAAX amino terminal protease family K07052 K07052; CAAX protease family protein D Thivi_0728 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thivi_1883 hypothetical protein K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Thivi_3864 Zn-dependent oligopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Thivi_2999 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D Thivi_2998 putative Zn-dependent peptidase K07263 pqqL; zinc protease [EC:3.4.24.-] D Thivi_1805 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Thivi_2611 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Thivi_2744 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Thivi_3385 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Thivi_0938 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thivi_2447 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thivi_0992 Zn-dependent protease with chaperone function K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Thivi_3137 putative Zn-dependent protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Thivi_2752 RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Thivi_1916 murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Thivi_3029 hypothetical protein K09933 mtfA; MtfA peptidase D Thivi_0605 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_4276 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_1921 trypsin-like serine protease with C-terminal PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-] D Thivi_1890 hypothetical protein K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50] D Thivi_3833 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Thivi_0442 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Thivi_1920 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Thivi_0628 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Thivi_2891 ATP dependent PIM1 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Thivi_0630 ATP-dependent proteinase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Thivi_3410 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Thivi_0607 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D Thivi_2071 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Thivi_2785 C-terminal processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Thivi_3367 C-terminal processing peptidase-1 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Thivi_3473 penicilin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D Thivi_2188 ClpP class periplasmic serine protease K04773 sppA; protease IV [EC:3.4.21.-] D Thivi_1325 inner membrane peptidase K04774 sohB; serine protease SohB [EC:3.4.21.-] D Thivi_1736 HslV component of HslUV peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Thivi_2993 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D Thivi_1881 collagenase-like protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Thivi_1264 collagenase-like protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Thivi_1263 collagenase-like protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Thivi_4124 microcin-processing peptidase 1 K03592 pmbA; PmbA protein D Thivi_4138 putative Zn-dependent protease-like protein K03592 pmbA; PmbA protein D Thivi_4103 microcin-processing peptidase 2 K03568 tldD; TldD protein D Thivi_4139 microcin-processing peptidase 2 K03568 tldD; TldD protein D Thivi_1874 large extracellular alpha-helical protein K06894 yfhM; alpha-2-macroglobulin D Thivi_0412 membrane protease subunit, stomatin/prohibitin K04087 hflC; modulator of FtsH protease HflC D Thivi_0411 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:tvi01003] D Thivi_4052 putative glycosyltransferase K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D Thivi_3953 glycosyl transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D Thivi_0879 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0880 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0139 tetratricopeptide repeat protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D Thivi_4065 glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Thivi_0136 glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D Thivi_3043 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Thivi_0102 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_4486 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_3276 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21] D Thivi_0690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_3288 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_2500 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Thivi_3347 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Thivi_0691 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thivi_2023 glycosyl transferase, UDP-glucuronosyltransferase K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-] D Thivi_1278 membrane glycosyltransferase K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D Thivi_2556 cellobiose phosphorylase K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D Thivi_0131 putative glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tvi01005] D Thivi_2757 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thivi_1113 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Thivi_2758 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Thivi_2312 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Thivi_2755 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thivi_2212 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Thivi_1741 PAP2 (acid phosphatase) superfamily protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D Thivi_2703 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Thivi_3808 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Thivi_4585 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Thivi_3140 Lauroyl/myristoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Thivi_2103 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Thivi_3970 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Thivi_3809 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Thivi_2230 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Thivi_2229 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Thivi_2482 ADP-heptose:LPS heptosyltransferase K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Thivi_2483 lipid A core-O-antigen ligase-like enyme K02847 waaL; O-antigen ligase [EC:2.4.99.26] D Thivi_4046 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thivi_2615 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Thivi_2830 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Thivi_2101 D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tvi01011] D Thivi_3229 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Thivi_2317 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Thivi_2318 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Thivi_2321 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Thivi_3779 UDP-N-acetylmuramyl tripeptide synthase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D Thivi_2316 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Thivi_3766 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D Thivi_3789 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Thivi_2322 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Thivi_2319 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Thivi_1364 undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_3774 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Thivi_0472 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Thivi_0691 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Thivi_3347 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D Thivi_2500 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Thivi_3829 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Thivi_2324 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Thivi_2434 cell division protein FtsI/penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D Thivi_3833 penicillin-binding protein 6 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Thivi_1920 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Thivi_0442 D-alanyl-D-alanine carboxypeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Thivi_0690 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_3288 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Thivi_2970 hypothetical protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D Thivi_0235 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D Thivi_1916 murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D Thivi_4552 soluble lytic murein transglycosylase-like protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Thivi_3831 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Thivi_4152 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Thivi_3964 soluble lytic murein transglycosylase-like protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Thivi_4622 soluble lytic murein transglycosylase-like protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Thivi_0022 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Thivi_1858 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Thivi_3832 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Thivi_2582 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Thivi_4000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thivi_3095 negative regulator of beta-lactamase expression K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tvi01004] D Thivi_0017 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Thivi_0016 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Thivi_2254 3-oxoacyl-(acyl-carrier-protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Thivi_0020 beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Thivi_0018 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_3267 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Thivi_1007 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D Thivi_2756 beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_2250 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Thivi_0978 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_0899 enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Thivi_3131 lysophospholipase L1-like esterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Thivi_3472 fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D Thivi_0244 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Thivi_3075 acyl-CoA synthetase/AMP-acid ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Thivi_0989 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3753 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_0015 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Thivi_4078 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Thivi_2829 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tvi01008] D Thivi_4097 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:tvi01006] D Thivi_2014 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thivi_4010 geranylgeranyl pyrophosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Thivi_2546 geranylgeranyl pyrophosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Thivi_2749 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Thivi_2024 phytoene/squalene synthetase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Thivi_0408 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Thivi_2436 1,4-dihydroxy-2-naphthoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Thivi_4155 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Thivi_2413 chlorophyll synthase K04040 chlG; chlorophyll/bacteriochlorophyll a synthase [EC:2.5.1.62 2.5.1.133] C 01007 Amino acid related enzymes [BR:tvi01007] D Thivi_3840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thivi_2430 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Thivi_4002 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Thivi_3085 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thivi_1149 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Thivi_2079 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thivi_3794 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thivi_3353 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thivi_3223 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thivi_3494 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thivi_0986 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thivi_1311 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thivi_1027 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thivi_2727 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thivi_2832 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thivi_2831 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thivi_0925 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thivi_1006 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thivi_1565 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thivi_0744 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thivi_1561 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thivi_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thivi_2619 aspartate/tyrosine/aromatic aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Thivi_0003 aspartate/tyrosine/aromatic aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D Thivi_2607 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Thivi_2124 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_3225 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Thivi_1763 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Thivi_1869 acetylornithine/succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Thivi_4332 adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Thivi_3076 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Thivi_0737 branched-chain amino acid aminotransferase, group I K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Thivi_0640 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2121 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Thivi_2375 putative PLP-dependent enzyme possibly involved in cell wall biogenesis K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tvi00194] D Thivi_3187 NAD-dependent oxidoreductase K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] D Thivi_2591 ATP synthase, F1 epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Thivi_2592 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Thivi_2593 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Thivi_2594 proton translocating ATP synthase, F1 alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Thivi_2595 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Thivi_2596 ATP synthase, F0 subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Thivi_2597 ATP synthase, F0 subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Thivi_2598 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thivi_2599 F0F1-type ATP synthase, subunit I K02116 atpI; ATP synthase protein I D Thivi_2000 photosynthetic reaction center L subunit K08928 pufL; photosynthetic reaction center L subunit D Thivi_1999 photosynthetic reaction center M subunit K08929 pufM; photosynthetic reaction center M subunit D Thivi_2405 photosynthetic reaction center, subunit H, bacterial K13991 puhA; photosynthetic reaction center H subunit D Thivi_1998 Photosynthetic reaction centre cytochrome C subunit K13992 pufC; photosynthetic reaction center cytochrome c subunit D Thivi_1980 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_1994 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_1996 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_2001 Antenna complex alpha/beta subunit K08926 pufA; light-harvesting complex 1 alpha chain D Thivi_0278 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0281 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0284 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0274 hypothetical protein K08927 pufB; light-harvesting complex 1 beta chain D Thivi_0276 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1987 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1985 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1981 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1983 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1995 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1997 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_2002 Antenna complex alpha/beta subunit K08927 pufB; light-harvesting complex 1 beta chain D Thivi_1982 Antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain D Thivi_1986 Antenna complex alpha/beta subunit K08930 pucA; light-harvesting protein B-800-850 alpha chain B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tvi03000] D Thivi_3487 DNA-binding domain-containing protein, AraC-type K14063 feaR; AraC family transcriptional regulator, positive regulator of tynA and feaB D Thivi_1685 transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D Thivi_1255 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Thivi_1404 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Thivi_1569 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Thivi_3703 transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Thivi_1717 transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D Thivi_4362 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Thivi_1611 hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D Thivi_4589 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Thivi_1415 putative transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D Thivi_3460 putative cobalamin binding protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Thivi_0117 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Thivi_0932 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Thivi_0447 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Thivi_3264 Fe2+/Zn2+ uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D Thivi_3593 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_1186 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_3550 cAMP-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Thivi_3968 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Thivi_0704 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Thivi_0261 cAMP-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Thivi_4247 cAMP-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Thivi_4145 cAMP-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Thivi_0623 rrf2 family protein, putative transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Thivi_3142 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Thivi_1666 putative transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Thivi_0684 birA, biotin-(acetyl-CoA-carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Thivi_1111 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Thivi_3504 transcriptional regulator, Nlp family K07724 ner; Ner family transcriptional regulator D Thivi_4388 putative transcriptional regulator K07724 ner; Ner family transcriptional regulator D Thivi_1533 Helix-turn-helix protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D Thivi_0356 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Thivi_3392 Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D Thivi_2524 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D Thivi_2526 ModE molybdate transport repressor domain/molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein D Thivi_3009 putative transcriptional regulator K07726 K07726; putative transcriptional regulator D Thivi_4537 putative transcriptional regulator K07726 K07726; putative transcriptional regulator D Thivi_1174 putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Thivi_0769 stress-induced morphogen K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Thivi_2600 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thivi_4595 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Thivi_1198 glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor D Thivi_3365 glycine cleavage system regulatory protein K03567 gcvR; glycine cleavage system transcriptional repressor D Thivi_3313 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Thivi_1551 putative transcriptional regulator K07733 alpA; prophage regulatory protein D Thivi_2364 putative transcriptional regulator K07733 alpA; prophage regulatory protein D Thivi_3311 putative transcriptional regulator K07735 algH; putative transcriptional regulator D Thivi_4003 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thivi_1031 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D Thivi_2780 hypothetical protein K03925 mraZ; transcriptional regulator MraZ D Thivi_2327 mraZ protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tvi03021] D Thivi_4226 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thivi_4194 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thivi_4195 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thivi_3323 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Thivi_4084 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Thivi_0484 RNA polymerase, sigma 38 subunit, RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Thivi_0601 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Thivi_0216 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Thivi_2234 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Thivi_0375 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thivi_0292 DNA/RNA helicase, superfamily II, SNF2 family K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D Thivi_3167 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Thivi_1036 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Thivi_4189 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Thivi_3747 glutathione S-transferase K03599 sspA; stringent starvation protein A D Thivi_3748 stringent starvation protein B K03600 sspB; stringent starvation protein B D Thivi_0334 anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Thivi_0333 anti-sigma regulatory factor (Ser/Thr protein kinase) K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D Thivi_0332 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17762 rsbS; rsbT antagonist protein RsbS D Thivi_0331 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) K17763 rsbR; rsbT co-antagonist protein RsbR D Thivi_4093 serine phosphatase RsbU, regulator of sigma subunit K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D Thivi_0335 Stage II sporulation protein E (SpoIIE) K05518 rsbX; phosphoserine phosphatase RsbX [EC:3.1.3.3] D Thivi_4091 anti-anti-sigma factor K04749 rsbV; anti-sigma B factor antagonist D Thivi_4092 anti-sigma regulatory factor (Ser/Thr protein kinase) K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Thivi_0602 negative regulator of sigma E activity K03597 rseA; sigma-E factor negative regulatory protein RseA D Thivi_0603 negative regulator of sigma E activity K03598 rseB; sigma-E factor negative regulatory protein RseB D Thivi_0074 Positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC D Thivi_0604 Positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC D Thivi_2737 Positive regulator of sigma E activity K03803 rseC; sigma-E factor negative regulatory protein RseC D Thivi_4003 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thivi_1768 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D Thivi_2504 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tvi03019] D Thivi_2191 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Thivi_4100 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Thivi_0609 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thivi_0516 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thivi_4071 oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D Thivi_2506 DNA/RNA helicase, superfamily II K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D Thivi_0681 DNA/RNA helicase, superfamily II K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Thivi_3755 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Thivi_2116 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thivi_3172 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Thivi_2504 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Thivi_3405 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D Thivi_4597 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thivi_0712 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0409 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Thivi_3572 polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Thivi_0975 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Thivi_3663 polyphosphate kinase 2, PA0141 family K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Thivi_0096 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Thivi_3621 NTP pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Thivi_0742 carbon storage regulator CsrA K03563 csrA; carbon storage regulator D Thivi_3996 RraA family protein K02553 rraA; regulator of ribonuclease activity A D Thivi_2239 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ D Thivi_3351 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D Thivi_2415 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:tvi03011] D Thivi_0301 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Thivi_2846 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D Thivi_2745 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Thivi_4207 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Thivi_4225 ribosomal protein S4, bacterial/organelle type K02986 RP-S4; small subunit ribosomal protein S4 D Thivi_4218 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Thivi_1185 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D Thivi_4197 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Thivi_4215 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Thivi_3600 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Thivi_4200 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Thivi_4224 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Thivi_4196 ribosomal protein S12, bacterial/organelle K02950 RP-S12; small subunit ribosomal protein S12 D Thivi_4223 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Thivi_4214 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Thivi_3171 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D Thivi_4317 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Thivi_4210 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Thivi_1184 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D Thivi_4205 ribosomal protein S19, bacterial/organelle K02965 RP-S19; small subunit ribosomal protein S19 D Thivi_0475 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Thivi_4081 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Thivi_4191 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Thivi_4204 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Thivi_4201 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Thivi_4202 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Thivi_4213 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D Thivi_4216 ribosomal protein L6, bacterial type K02933 RP-L6; large subunit ribosomal protein L6 D Thivi_1182 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Thivi_4192 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Thivi_4190 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Thivi_4193 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Thivi_3599 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Thivi_4211 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Thivi_4220 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Thivi_4208 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Thivi_4227 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Thivi_4217 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Thivi_4320 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D Thivi_1562 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D Thivi_2545 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Thivi_4206 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Thivi_4203 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D Thivi_4212 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Thivi_2544 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Thivi_3270 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Thivi_4209 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Thivi_4219 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Thivi_2848 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D Thivi_0014 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D Thivi_3271 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D Thivi_1563 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Thivi_4222 ribosomal protein L36, bacterial type K02919 RP-L36; large subunit ribosomal protein L36 D Thivi_4179 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25 D Thivi_1906 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_2648 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_4026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_1910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_4022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_2652 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_1907 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_4025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_2649 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tvi03009] D Thivi_0609 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thivi_3767 serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Thivi_4071 oligoribonuclease (3'->5' exoribonuclease) K13288 orn; oligoribonuclease [EC:3.1.-.-] D Thivi_0610 GTP-binding protein Era K03595 era; GTPase D Thivi_2543 Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D Thivi_4003 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Thivi_3167 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D Thivi_1036 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Thivi_4189 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Thivi_2931 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Thivi_3196 16S rRNA m(5)C-967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Thivi_3695 16S RNA G1207 methylase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D Thivi_2997 16S rRNA m(2)G-966 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Thivi_3302 16S rRNA m(3)U-1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Thivi_2602 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thivi_2326 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Thivi_2329 putative S-adenosylmethionine-dependent methyltransferase, YraL family K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Thivi_0515 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Thivi_0939 23S rRNA methylase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Thivi_4098 rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Thivi_0510 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Thivi_1848 protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Thivi_3402 putative N6-adenine-specific DNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D Thivi_2730 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Thivi_4323 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Thivi_4296 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Thivi_2190 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Thivi_3363 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Thivi_3814 (SSU ribosomal protein S18P)-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Thivi_3219 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D Thivi_4318 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Thivi_4527 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Thivi_1103 (LSU ribosomal protein L11P)-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Thivi_0624 (LSU ribosomal protein L3P)-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Thivi_2191 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Thivi_4100 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Thivi_3312 RNAse H-fold protein YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Thivi_3605 DNA/RNA helicase, superfamily II K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Thivi_3755 DNA/RNA helicase, superfamily II K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Thivi_2031 DNA/RNA helicase, superfamily II K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D Thivi_1656 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Thivi_4069 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Thivi_2724 ribosome-associated GTPase EngA K03977 engA; GTPase D Thivi_0410 GTP-binding protein HflX K03665 hflX; GTPase D Thivi_3204 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Thivi_2924 metal dependent phosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thivi_3322 (p)ppGpp synthetase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Thivi_3169 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Thivi_3166 hypothetical protein K09748 rimP; ribosome maturation factor RimP D Thivi_0962 iojap-like ribosome-associated protein K09710 ybeB; ribosome-associated protein D Thivi_1851 metalloprotein, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor D Thivi_0617 putative RNA-binding protein containing KH domain, possibly ribosomal protein K07574 yhbY; RNA-binding protein D Thivi_0757 hypothetical protein K09889 yjgA; ribosome-associated protein D Thivi_2235 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor D Thivi_2628 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D Thivi_0013 putative metal-binding protein, possibly nucleic-acid binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tvi03016] D Thivi_4232 tRNA nucleotidyltransferase/poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Thivi_3840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thivi_1006 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Thivi_3223 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Thivi_0986 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thivi_3353 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Thivi_2430 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Thivi_3794 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thivi_1311 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Thivi_1027 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thivi_0744 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Thivi_1565 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Thivi_0925 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Thivi_2079 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Thivi_3494 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Thivi_2727 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Thivi_1561 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Thivi_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Thivi_3085 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thivi_1149 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Thivi_2072 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Thivi_2710 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Thivi_2897 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Thivi_4322 putative methyltransferase, YaeB/AF_0241 family K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D Thivi_0919 pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Thivi_3170 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Thivi_0504 hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Thivi_0485 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thivi_3204 putative translation factor (SUA5) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Thivi_0408 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Thivi_3008 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Thivi_2603 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Thivi_3005 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Thivi_2328 Bacterial RNase P class A K01978 rnpB; M1 RNA D Thivi_1865 RNAse T K03683 rnt; ribonuclease T [EC:3.1.13.-] D Thivi_3327 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Thivi_0897 exoribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Thivi_0747 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Thivi_3188 ATP-binding cassette protein, ChvD family K06020 ettA; energy-dependent translational throttle protein EttA D Thivi_2832 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Thivi_2831 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Thivi_4002 glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Thivi_0224 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D Thivi_2275 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Thivi_1832 tRNA-U16,U17-dihydrouridine synthase K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D Thivi_1110 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Thivi_1853 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Thivi_3783 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D Thivi_3571 methyltransferase, putative K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Thivi_1108 methylase involved in ubiquinone/menaquinone biosynthesis K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D Thivi_3570 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D Thivi_4319 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Thivi_3148 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D Thivi_2791 putative rRNA methylase SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Thivi_4545 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Thivi_3847 putative ATPase of the PP-loop superfamily implicated in cell cycle control K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Thivi_2160 putative redox protein, regulator of disulfide bond formation K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Thivi_0548 sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D Thivi_0547 sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C D Thivi_0546 sulfur relay protein TusD/DsrE K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D Thivi_1716 sulfur relay protein, TusE/DsrC/DsvC family K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D Thivi_3285 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D Thivi_0030 hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein D Thivi_0762 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D Thivi_0679 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Thivi_0092 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Thivi_0093 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thivi_3266 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Thivi_0094 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Thivi_1804 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Thivi_4564 iron-sulfur cluster binding protein, putative K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Thivi_1696 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D Thivi_3842 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Thivi_0838 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Thivi_4477 putative P-loop ATPase fused to an acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D Thivi_4306 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Thivi_4080 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Thivi_3999 ATPase, YjeE family K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Thivi_1807 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Thivi_0516 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Thivi_3172 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Thivi_1428 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Thivi_1738 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:tvi03012] D Thivi_3168 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Thivi_1564 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Thivi_3465 ATPase component of ABC transporters with duplicated ATPase domain K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Thivi_2746 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Thivi_4186 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_4199 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_2971 small GTP-binding protein domain protein K02355 fusA; elongation factor G D Thivi_2227 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Thivi_4198 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Thivi_4173 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Thivi_2748 ribosome recycling factor K02838 frr; ribosome recycling factor D Thivi_4172 (protein release factor)-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Thivi_4180 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Thivi_0947 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Thivi_0222 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Thivi_0223 lysyl-tRNA synthetase-like protein GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D Thivi_0221 L-lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D Thivi_2186 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D Thivi_0438 putative peptide chain release factor H K02839 prfH; peptide chain release factor D Thivi_0809 protein chain release factor B K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:tvi03110] D Thivi_4575 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Thivi_1253 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Thivi_0988 ATPase with chaperone activity, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D Thivi_0629 endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Thivi_4295 endopeptidase Clp ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Thivi_1735 ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Thivi_4597 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thivi_0712 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_4598 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thivi_3092 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D Thivi_1146 disulfide bond chaperone K04083 hslO; molecular chaperone Hsp33 D Thivi_4596 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Thivi_0663 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Thivi_3843 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Thivi_0664 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein D Thivi_1756 molecular chaperone (small heat shock protein) K04080 ibpA; molecular chaperone IbpA D Thivi_1422 molecular chaperone (small heat shock protein) K04080 ibpA; molecular chaperone IbpA D Thivi_0730 ribosome-associated heat shock protein implicated in recycling of 50S subunit K04762 hslR; ribosome-associated heat shock protein Hsp15 D Thivi_0711 Co-chaperonin GroES K04078 groES; chaperonin GroES D Thivi_0660 Co-chaperonin GroES K04078 groES; chaperonin GroES D Thivi_0605 periplasmic serine protease, Do/DeqQ family K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_4276 hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107] D Thivi_0938 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thivi_2447 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Thivi_2598 F0F1-type ATP synthase, alpha subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Thivi_2789 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Thivi_0513 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein K06006 cpxP; periplasmic protein CpxP/Spy D Thivi_2977 hypothetical protein K09796 pccA; periplasmic copper chaperone A D Thivi_2691 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Thivi_2688 Hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Thivi_2093 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Thivi_0634 parvulin-like peptidyl-prolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Thivi_2590 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Thivi_1282 parvulin-like peptidyl-prolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Thivi_4294 nitrogen fixation protein NifM K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Thivi_1122 parvulin-like peptidyl-prolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Thivi_2571 thioredoxin domain-containing protein K03671 TXN; thioredoxin D Thivi_2505 thioredoxin K03671 TXN; thioredoxin D Thivi_0621 thioredoxin K03671 TXN; thioredoxin D Thivi_0835 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Thivi_0836 thioredoxin K05838 ybbN; putative thioredoxin D Thivi_0729 Glutaredoxin, GrxC family K03676 grxC; glutaredoxin 3 D Thivi_1866 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D Thivi_1904 putative dithiol-disulfide isomerase involved in polyketide biosynthesis K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Thivi_4156 putative dithiol-disulfide isomerase involved in polyketide biosynthesis K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Thivi_2527 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Thivi_3725 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Thivi_1096 thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Thivi_3066 periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tvi04131] D Thivi_2731 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Thivi_2627 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Thivi_2347 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thivi_2343 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_2419 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Thivi_0266 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:tvi04121] C 03051 Proteasome [BR:tvi03051] D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:tvi03032] D Thivi_3966 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Thivi_4230 ERCC4-type nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Thivi_0631 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thivi_1559 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Thivi_0300 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Thivi_2843 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thivi_1181 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Thivi_4083 DNA primase, catalytic core K02316 dnaG; DNA primase [EC:2.7.7.101] D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_1064 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thivi_2842 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thivi_1008 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Thivi_0984 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thivi_0024 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thivi_0245 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_3967 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_2713 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thivi_2759 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Thivi_1137 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D Thivi_2120 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Thivi_2905 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Thivi_4562 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Thivi_4353 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Thivi_3202 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Thivi_3683 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tvi03036] D Thivi_0879 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0880 putative O-linked N-acetylglucosamine transferase, SPINDLY family K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Thivi_0609 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Thivi_0631 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thivi_1559 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Thivi_0300 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Thivi_3092 DnaJ-class molecular chaperone with C-terminal Zn finger domain K05516 cbpA; curved DNA-binding protein D Thivi_3093 hypothetical protein K18997 cbpM; chaperone modulatory protein CbpM D Thivi_2843 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Thivi_1111 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Thivi_0409 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Thivi_4589 transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Thivi_4487 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Thivi_1148 hypothetical protein K05896 scpA; segregation and condensation protein A D Thivi_1147 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D Thivi_2314 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Thivi_3976 septum formation initiator K05589 ftsB; cell division protein FtsB D Thivi_2985 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thivi_2324 cell division protein FtsI/penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Thivi_2475 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Thivi_4302 DNA segregation ATPase, FtsK/SpoIIIE family K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Thivi_2325 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Thivi_2315 cell division septal protein K03589 ftsQ; cell division protein FtsQ D Thivi_2320 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Thivi_2984 cell division protein K09811 ftsX; cell division transport system permease protein D Thivi_2313 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thivi_4488 cell division protein K03528 zipA; cell division protein ZipA D Thivi_3388 hypothetical protein K09888 zapA; cell division protein ZapA D Thivi_3387 TIGR02449 family protein K09892 zapB; cell division protein ZapB D Thivi_3900 hypothetical protein K18778 zapD; cell division protein ZapD D Thivi_4008 putative ATPase K06916 zapE; cell division protein ZapE D Thivi_4000 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thivi_2767 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2799 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2802 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_4560 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2709 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Thivi_2708 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Thivi_2707 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Thivi_3826 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Thivi_3827 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Thivi_3828 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Thivi_3830 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D Thivi_0338 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_3960 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_1019 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_2601 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_2600 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Thivi_4562 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Thivi_4353 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Thivi_2603 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Thivi_2602 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Thivi_2390 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Thivi_3723 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Thivi_3038 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thivi_0435 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Thivi_3377 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tvi03400] D Thivi_3721 O-6-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Thivi_1361 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Thivi_2428 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D Thivi_3751 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Thivi_3372 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Thivi_4230 ERCC4-type nuclease K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] D Thivi_2307 thiamine monophosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Thivi_3417 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Thivi_2717 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Thivi_3772 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Thivi_3676 formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Thivi_1972 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Thivi_0758 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Thivi_4489 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Thivi_0273 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D Thivi_2472 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A D Thivi_0512 UvrA family protein K03701 uvrA; excinuclease ABC subunit A D Thivi_2618 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Thivi_4365 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Thivi_2845 DNA/RNA helicase, superfamily I K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Thivi_4194 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Thivi_4195 DNA-directed RNA polymerase, beta'' subunit, predominant form K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Thivi_4226 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Thivi_3323 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Thivi_1226 transcription-repair coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Thivi_3738 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Thivi_4001 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Thivi_4321 exonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D Thivi_2263 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Thivi_4009 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Thivi_1064 DNA-directed DNA polymerase III PolC K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Thivi_2842 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Thivi_1008 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Thivi_0984 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Thivi_0024 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Thivi_0245 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_3967 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Thivi_2713 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_3501 T/G mismatch-specific endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D Thivi_2028 DNA helicase/exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D Thivi_2029 DNA helicase/exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D Thivi_2027 DNA helicase/exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D Thivi_0746 protein RecA K03553 recA; recombination protein RecA D Thivi_0672 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Thivi_1575 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Thivi_0671 Holliday junction endonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Thivi_3795 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Thivi_0662 protein of unknown function (DUF349) K03546 sbcC; DNA repair protein SbcC/Rad50 D Thivi_2667 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Thivi_3904 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_1474 putative transcriptional regulator with HTH domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_4154 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Thivi_0611 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Thivi_2711 DNA replication and repair protein RecR K06187 recR; recombination protein RecR D Thivi_4593 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Thivi_2512 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC D Thivi_4514 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_1073 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_0465 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_2720 putative ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Thivi_2120 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Thivi_2905 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Thivi_3202 DNA topoisomerase I, bacterial K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Thivi_0631 bacterial nucleoid DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Thivi_1111 Factor for inversion stimulation Fis, transcriptional activator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Thivi_1559 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Thivi_0300 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Thivi_2116 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Thivi_3410 SOS regulatory protein LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Thivi_0745 hypothetical protein K03565 recX; regulatory protein D Thivi_0668 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Thivi_3349 DNA helicase, Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Thivi_3117 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Thivi_2276 ribonucleotide reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:tvi03029] D Thivi_3745 cytochrome b subunit of the bc complex K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Thivi_3168 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D Thivi_1564 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D Thivi_2746 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Thivi_4186 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_4199 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_2971 small GTP-binding protein domain protein K02355 fusA; elongation factor G D Thivi_2227 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Thivi_4198 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Thivi_0610 GTP-binding protein Era K03595 era; GTPase D Thivi_3085 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Thivi_0986 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Thivi_1027 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Thivi_3794 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Thivi_3824 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Thivi_3434 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Thivi_3825 glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Thivi_3741 hypothetical protein K23499 RMND1; required for meiotic nuclear division protein 1 D Thivi_1490 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2470 single stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D Thivi_2753 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D Thivi_4597 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thivi_4596 molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE D Thivi_0712 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0711 Co-chaperonin GroES K04078 groES; chaperonin GroES D Thivi_0660 Co-chaperonin GroES K04078 groES; chaperonin GroES D Thivi_4598 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Thivi_0485 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thivi_1866 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D Thivi_3038 ATPase involved in chromosome partitioning K03593 mrp; ATP-binding protein involved in chromosome partitioning D Thivi_3007 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thivi_2976 uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems K07152 SCO1; protein SCO1 D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tvi02000] D Thivi_3807 lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Thivi_2464 fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Thivi_0046 ABC-type multidrug transport system, ATPase and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Thivi_0527 ABC transporter, permease/ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Thivi_1940 type I secretion system ABC transporter, PrtD family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Thivi_4311 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D Thivi_4312 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D Thivi_4498 ABC-type uncharacterized transport system, permease and ATPase component K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D Thivi_0262 ATPase component of ABC transporters with duplicated ATPase domain K15738 uup; ABC transport system ATP-binding/permease protein D Thivi_1742 ABC-type molybdate transport system, periplasmic component K02020 modA; molybdate transport system substrate-binding protein D Thivi_3450 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thivi_2523 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D Thivi_3451 ABC-type molybdate transport system, permease component K02018 modB; molybdate transport system permease protein D Thivi_2522 molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Thivi_3452 ABC-type spermidine/putrescine transport system, ATPase component K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thivi_2521 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Thivi_1337 ABC-type Fe3+ transport system, periplasmic component K02012 afuA; iron(III) transport system substrate-binding protein D Thivi_1338 ABC-type Fe3+ transport system, permease component K02011 afuB; iron(III) transport system permease protein D Thivi_1339 ABC-type spermidine/putrescine transport system, ATPase component K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Thivi_3176 spermidine/putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein D Thivi_3173 ABC-type spermidine/putrescine transport system, permease component II K11074 potI; putrescine transport system permease protein D Thivi_3174 ABC-type spermidine/putrescine transport system, permease component I K11075 potH; putrescine transport system permease protein D Thivi_3175 spermidine/putrescine ABC transporter ATP-binding subunit K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D Thivi_1864 spermidine/putrescine-binding periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D Thivi_0477 periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845 opuC; osmoprotectant transport system substrate-binding protein D Thivi_0476 ABC-type proline/glycine betaine transport system, ATPase component K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D Thivi_2895 TIGR00245 family protein K02069 STAR2; UDP-glucose/iron transport system permease protein D Thivi_2896 ABC-type uncharacterized transport system, ATPase component K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D Thivi_3232 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thivi_3254 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Thivi_3233 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thivi_3252 ABC-type transport system involved in resistance to organic solvents, permease component K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Thivi_3234 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thivi_3253 ABC-type metal ion transport system, ATPase component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Thivi_3255 ABC-type uncharacterized transport system, auxiliary component K18480 linN; cholesterol transport system auxiliary component D Thivi_3231 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 mlaC; phospholipid transport system substrate-binding protein D Thivi_3230 putative NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D Thivi_0967 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0971 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0973 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_3045 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_1368 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_4109 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Thivi_0970 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Thivi_3046 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Thivi_0969 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Thivi_3047 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Thivi_0968 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thivi_3048 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Thivi_3660 amino acid ABC transporter substrate-binding protein, PAAT family K09969 aapJ; general L-amino acid transport system substrate-binding protein D Thivi_2092 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Thivi_2091 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Thivi_2090 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Thivi_2089 urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D Thivi_2087 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Thivi_4094 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Thivi_4095 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Thivi_0901 ABC-type dipeptide transport system, periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Thivi_0902 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Thivi_0903 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Thivi_0898 oligopeptide/dipeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D Thivi_1702 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Thivi_3448 ABC-type Fe3+-hydroxamate transport system, periplasmic component K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Thivi_1701 ABC-type Fe3+-siderophore transport system, permease component K02015 ABC.FEV.P; iron complex transport system permease protein D Thivi_1700 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Thivi_2515 ABC-type metal ion transport system, periplasmic component/surface adhesin K09815 znuA; zinc transport system substrate-binding protein D Thivi_3263 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein D Thivi_3262 ATPase component of Mn/Zn ABC-type transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D Thivi_1168 cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Thivi_1166 ABC-type Co2+ transport system, permease component K02007 cbiM; cobalt/nickel transport system permease protein D Thivi_1169 ABC-type cobalt transport system, ATPase component K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Thivi_1165 ABC-type Co2+ transport system, periplasmic component K10094 cbiK; nickel transport protein D Thivi_1167 hypothetical protein K16915 cbiL; nickel transport protein D Thivi_2518 ABC-type metal ion transport system, periplasmic component/surface adhesin K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Thivi_2516 ABC-type Mn2+/Zn2+ transport system, permease component K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Thivi_2517 ATPase component of Mn/Zn ABC-type transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Thivi_0121 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_2677 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_4034 ABC-type polysaccharide/polyol phosphate export systems, permease component K09690 wzm; homopolymeric O-antigen transport system permease protein D Thivi_2678 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_0125 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_4038 ABC-type polysaccharide/polyol phosphate transport system, ATPase component K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Thivi_0726 putative permease K07091 lptF; lipopolysaccharide export system permease protein D Thivi_1806 putative permease K11720 lptG; lipopolysaccharide export system permease protein D Thivi_2233 ABC-type (unclassified) transport system, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Thivi_0652 ABC-type transport system involved in multi-copper enzyme maturation, permease component K25151 gldF; gliding motility-associated transport system permease protein D Thivi_1964 hypothetical protein K25151 gldF; gliding motility-associated transport system permease protein D Thivi_1963 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein D Thivi_0653 ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein D Thivi_1965 ABC-type uncharacterized transporter K25153 gldG; gliding motility-associatede transport system auxiliary component D Thivi_0725 lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Thivi_0724 ABC-type antimicrobial peptide transport system, ATPase component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Thivi_3058 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D Thivi_3059 ABC-type transport system involved in cytochrome c biogenesis, permease component K02195 ccmC; heme exporter protein C D Thivi_3062 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D Thivi_3063 heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Thivi_2984 cell division protein K09811 ftsX; cell division transport system permease protein D Thivi_2985 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Thivi_2623 ABC-type polysaccharide/polyol phosphate export systems, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Thivi_2584 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Thivi_1819 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein D Thivi_1820 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Thivi_2585 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Thivi_2622 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Thivi_0813 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_1713 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_0928 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_0929 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_3133 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_3425 ABC-type transport system, involved in lipoprotein release, permease component K02004 ABC.CD.P; putative ABC transport system permease protein D Thivi_1714 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Thivi_0759 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Thivi_0930 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Thivi_3424 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Thivi_3132 putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Thivi_1086 Iron-regulated ABC transporter ATPase subunit SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D Thivi_3415 sugar phosphate permease K13021 ttuB; MFS transporter, ACS family, tartrate transporter D Thivi_1750 arabinose efflux permease family protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Thivi_1978 arabinose efflux permease family protein K08226 pucC; MFS transporter, BCD family, chlorophyll transporter D Thivi_3564 Major Facilitator Superfamily transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Thivi_0705 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Thivi_2705 arabinose efflux permease family protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Thivi_0266 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family D Thivi_2242 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Thivi_3622 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D Thivi_2241 phosphotransferase system HPr (HPr) family protein K02784 ptsH; phosphocarrier protein HPr D Thivi_0264 phosphotransferase system HPr (HPr) family protein K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202] D Thivi_0263 PTS system D-glucose-specific IIC component, Glc family K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D Thivi_2240 phosphotransferase system, mannose/fructose-specific component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Thivi_2237 phosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type) K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Thivi_2694 MIP family channel protein K06188 aqpZ; aquaporin Z D Thivi_1627 K+ transport system, NAD-binding component K10716 kch; voltage-gated potassium channel D Thivi_3674 Ion channel K10716 kch; voltage-gated potassium channel D Thivi_1164 ammonia permease K03320 amt; ammonium transporter, Amt family D Thivi_3470 ammonium transporter K03320 amt; ammonium transporter, Amt family D Thivi_1955 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Thivi_3747 glutathione S-transferase K03599 sspA; stringent starvation protein A D Thivi_3560 spermidine/putrescine-binding periplasmic protein K07114 yfbK; Ca-activated chloride channel homolog D Thivi_0638 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D Thivi_0874 tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog D Thivi_2062 tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog D Thivi_2063 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 K07114 yfbK; Ca-activated chloride channel homolog D Thivi_2064 Mg-chelatase subunit ChlD K07114 yfbK; Ca-activated chloride channel homolog D Thivi_0568 FtsH-interacting integral membrane protein K19416 yccA; modulator of FtsH protease D Thivi_3576 small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel D Thivi_2440 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter D Thivi_2243 Mg2+ transporter MgtE K06213 mgtE; magnesium transporter D Thivi_0382 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0352 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D Thivi_2208 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0383 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0351 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_2209 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_3805 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D Thivi_1159 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Thivi_3445 biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D Thivi_1160 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D Thivi_3806 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D Thivi_3446 biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D Thivi_1795 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Thivi_1794 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D Thivi_3558 magnesium Mg(2+) and cobalt Co(2+) transport protein CorA K03284 corA; magnesium transporter D Thivi_2529 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Thivi_2990 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_2511 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_0053 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_2989 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_1894 outer membrane protein/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Thivi_3739 outer membrane protein/peptidoglycan-associated (lipo)protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D Thivi_1266 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D Thivi_2156 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D Thivi_4181 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein D Thivi_4535 autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion K12686 apeE; outer membrane lipase/esterase D Thivi_0715 TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter D Thivi_2501 outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D Thivi_4452 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Thivi_1317 outer membrane receptor for ferrienterochelin and colicins K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_4258 putative polysaccharide export protein, PEP-CTERM sytem-associated K01991 wza; polysaccharide biosynthesis/export protein D Thivi_0265 carbohydrate-selective porin K07267 oprB; porin D Thivi_2753 Beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D Thivi_2725 Beta-barrel assembly machine subunit BamB K17713 bamB; outer membrane protein assembly factor BamB D Thivi_3927 putative lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Thivi_3362 Beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD D Thivi_0933 small protein A (tmRNA-binding) K06186 bamE; outer membrane protein assembly factor BamE D Thivi_4583 outer membrane protein K07278 tamA; translocation and assembly module TamA D Thivi_1411 outer membrane protein K07278 tamA; translocation and assembly module TamA D Thivi_4584 hypothetical protein K09800 tamB; translocation and assembly module TamB D Thivi_1412 hypothetical protein K09800 tamB; translocation and assembly module TamB D Thivi_2232 lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D Thivi_2231 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D Thivi_1121 organic solvent tolerance protein OstA K04744 lptD; LPS-assembly protein D Thivi_0985 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D Thivi_1850 putative Mg2+ and Co2+ transporter CorC K06189 corC; hemolysin (HlyC) family protein D Thivi_1391 arginine:ornithine antiporter, APA family K03758 arcD; arginine:ornithine antiporter / lysine permease D Thivi_4465 putative Co/Zn/Cd cation transporter K13283 fieF; ferrous-iron efflux pump FieF D Thivi_1898 putative silver efflux pump K07787 cusA; copper/silver efflux system protein D Thivi_2801 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_2766 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_4559 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_2798 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_0313 cation/cationic drug transporter K03297 emrE; small multidrug resistance pump D Thivi_4012 cation/cationic drug transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE D Thivi_2536 tellurite resistance protein-like permease K03304 tehA; tellurite resistance protein D Thivi_0089 K+dependent Na+ exchanger related-protein K07301 yrbG; cation:H+ antiporter D Thivi_0247 putative sodium:solute symporter, VC_2705 subfamily K14393 actP; cation/acetate symporter D Thivi_3810 SSS sodium solute transporter K14393 actP; cation/acetate symporter D Thivi_1401 sodium--glutamate symport carrier GltS K03312 gltS; glutamate:Na+ symporter, ESS family D Thivi_2280 NhaP-type Na+(K+)/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D Thivi_1367 NhaP-type Na+(K+)/H+ antiporter K03316 nhaP; Na+:H+ antiporter D Thivi_1747 Kef-type K+ transport system, membrane component K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D Thivi_0056 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D Thivi_2541 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D Thivi_0057 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D Thivi_3192 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D Thivi_2540 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D Thivi_1973 high affinity sulfate transporter 1 K03321 TC.SULP; sulfate permease, SulP family D Thivi_3671 high affinity sulfate transporter 1 K03321 TC.SULP; sulfate permease, SulP family D Thivi_1668 arsenical-resistance protein K03325 ACR3; arsenite transporter D Thivi_2962 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit K05559 phaA; multicomponent K+:H+ antiporter subunit A D Thivi_2961 multisubunit Na+/H+ antiporter, MnhC subunit K05560 phaC; multicomponent K+:H+ antiporter subunit C D Thivi_2960 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K05561 phaD; multicomponent K+:H+ antiporter subunit D D Thivi_2959 multisubunit Na+/H+ antiporter, MnhE subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E D Thivi_2958 multisubunit Na+/H+ antiporter, MnhF subunit K05563 phaF; multicomponent K+:H+ antiporter subunit F D Thivi_2957 multisubunit potassium/proton antiporter, PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G D Thivi_1051 multisubunit Na+/H+ antiporter, MnhB subunit K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D Thivi_1052 multisubunit Na+/H+ antiporter, MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Thivi_1377 multisubunit Na+/H+ antiporter, MnhC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D Thivi_1053 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D Thivi_1062 multisubunit Na+/H+ antiporter, MnhE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Thivi_1373 multisubunit Na+/H+ antiporter, MnhE subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D Thivi_1374 multisubunit Na+/H+ antiporter, MnhF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D Thivi_1049 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Thivi_1375 multisubunit Na+/H+ antiporter, MnhG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D Thivi_0472 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D Thivi_3443 putative permease K13936 mdcF; malonate transporter and related proteins D Thivi_2153 putative permease K03548 perM; putative permease D Thivi_3041 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter D Thivi_2320 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Thivi_2627 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Thivi_0156 high-affinity Fe2+/Pb2+ permease K07243 FTR; high-affinity iron transporter D Thivi_2530 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D Thivi_3310 TonB family protein K03832 tonB; periplasmic protein TonB D Thivi_1161 TonB family protein K03832 tonB; periplasmic protein TonB D Thivi_3447 TonB family protein K03832 tonB; periplasmic protein TonB D Thivi_1791 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D Thivi_1793 TolA protein K03646 tolA; colicin import membrane protein D Thivi_1792 tol-pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D Thivi_3567 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Thivi_1825 vacuolar-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Thivi_2497 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D Thivi_2498 oxaloacetate decarboxylase alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D Thivi_2499 sodium pump decarboxylase gamma subunit family protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D Thivi_1937 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system D Thivi_1899 RND family efflux transporter, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D Thivi_2767 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2799 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2802 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_4560 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_0522 uncharacterized protein involved in exopolysaccharide biosynthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D Thivi_4256 exopolysaccharide/PEPCTERM locus tyrosine autokinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Thivi_4257 polysaccharide chain length determinant protein, PEP-CTERM locus subfamily K25590 epsF; protein tyrosine kinase modulator D Thivi_1629 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D Thivi_1959 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D Thivi_1960 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A D Thivi_1630 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D Thivi_1961 ferrous iron transporter FeoB K04759 feoB; ferrous iron transport protein B D Thivi_0450 ABC-type long-chain fatty acid transport system, fused permease and ATPase component K17938 sbmA; peptide/bleomycin uptake transporter D Thivi_3067 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Thivi_2244 outer membrane protein V K07274 mipA; MipA family protein C 02044 Secretion system [BR:tvi02044] D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein D Thivi_1940 type I secretion system ABC transporter, PrtD family K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase D Thivi_1937 type I secretion membrane fusion protein, HlyD family K12537 hasE; membrane fusion protein, type I secretion system D Thivi_2438 type II secretory pathway, component ExeA (predicted ATPase) K02450 gspA; general secretion pathway protein A D Thivi_4261 type II secretory pathway, component ExeA (predicted ATPase) K02450 gspA; general secretion pathway protein A D Thivi_2439 hypothetical protein K02451 gspB; general secretion pathway protein B D Thivi_2865 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D Thivi_3002 type II secretion system protein E (GspE) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Thivi_2828 type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F D Thivi_0119 type II secretion system protein G (GspG) K02456 gspG; general secretion pathway protein G D Thivi_2873 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Thivi_2872 general secretion pathway protein H K02457 gspH; general secretion pathway protein H D Thivi_2871 prepilin-type N-terminal cleavage/methylation domain-containing protein K02458 gspI; general secretion pathway protein I D Thivi_2870 prepilin-type N-terminal cleavage/methylation domain-containing protein K02459 gspJ; general secretion pathway protein J D Thivi_2869 type II secretory pathway, component PulK K02460 gspK; general secretion pathway protein K D Thivi_2868 Tfp pilus assembly protein PilN K02461 gspL; general secretion pathway protein L D Thivi_2867 General secretion pathway protein M K02462 gspM; general secretion pathway protein M D Thivi_0240 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thivi_0799 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_2485 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_0184 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_0242 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_2761 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_0241 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Thivi_2142 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D Thivi_2201 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D Thivi_2729 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Thivi_3307 response regulator containing a CheY-like receiver domain and a GGDEF domain K02657 pilG; twitching motility two-component system response regulator PilG D Thivi_3306 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D Thivi_3305 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D Thivi_3304 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Thivi_2852 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Thivi_2853 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D Thivi_2854 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Thivi_2855 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Thivi_2856 type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ D Thivi_0185 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Thivi_3317 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Thivi_2863 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_2864 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_3316 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_2138 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Thivi_2139 Tfp pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Thivi_2140 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Thivi_2141 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Thivi_0025 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Thivi_2137 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Thivi_2202 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT D Thivi_0920 FimV N-terminal domain protein K08086 fimV; pilus assembly protein FimV D Thivi_3331 putative integral membrane protein K02221 yggT; YggT family protein D Thivi_0721 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Thivi_0372 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thivi_0371 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thivi_0386 uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein K04061 flhB2; flagellar biosynthesis protein D Thivi_0358 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Thivi_0360 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D Thivi_0361 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thivi_0366 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thivi_0367 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thivi_0368 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thivi_0369 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thivi_0370 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thivi_1597 TraG-like protein, N-terminal region K12056 traG; conjugal transfer mating pair stabilization protein TraG D Thivi_1452 muramidase (phage lambda lysozyme) K12056 traG; conjugal transfer mating pair stabilization protein TraG D Thivi_1599 TraF-like protein K12057 traF; conjugal transfer pilus assembly protein TraF D Thivi_1450 TraF-like protein K12057 traF; conjugal transfer pilus assembly protein TraF D Thivi_1497 Mating pair stabilization protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D Thivi_1498 TraU protein K12060 traU; conjugal transfer pilus assembly protein TraU D Thivi_1499 Type-F conjugative transfer system pilin assembly protein K12061 traW; conjugal transfer pilus assembly protein TraW D Thivi_1500 signal peptidase I K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Thivi_1502 hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D Thivi_1509 TraE protein K12067 traE; conjugal transfer pilus assembly protein TraE D Thivi_1510 type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL D Thivi_1520 Putative helicase K12070 traI; conjugal transfer pilus assembly protein TraI D Thivi_1519 conjugative coupling factor TraD, SXT/TOL subfamily K12071 traD; conjugal transfer pilus assembly protein TraD D Thivi_3725 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Thivi_1598 Conjugative relaxosome accessory transposon protein K12072 traH; conjugative transfer pilus assembly protein TraH D Thivi_1451 Conjugative relaxosome accessory transposon protein K12072 traH; conjugative transfer pilus assembly protein TraH D Thivi_4535 autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion K12686 apeE; outer membrane lipase/esterase D Thivi_2302 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D Thivi_2301 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK D Thivi_2300 type VI secretion protein, VC_A0114 family K11893 impJ; type VI secretion system protein ImpJ D Thivi_2284 type VI secretion protein, VC_A0111 family K11895 impH; type VI secretion system protein ImpH D Thivi_2285 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG D Thivi_2286 type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF D Thivi_2289 type VI secretion protein, EvpB/VC_A0108 family K11900 impC; type VI secretion system protein ImpC D Thivi_2290 type VI secretion protein, VC_A0107 family K11901 impB; type VI secretion system protein ImpB D Thivi_2291 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA D Thivi_2288 hemolysin-coregulated protein (uncharacterized) K11903 hcp; type VI secretion system secreted protein Hcp D Thivi_2297 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Thivi_2299 type VI secretion lipoprotein, VC_A0113 family K11906 vasD; type VI secretion system protein VasD D Thivi_2283 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D Thivi_2303 type VI secretion-associated protein, BMA_A0400 family K11890 impM; type VI secretion system protein ImpM D Thivi_2287 protein of avirulence locus involved in temperature-dependent protein secretion K11898 impE; type VI secretion system protein ImpE D Thivi_3423 von Willebrand factor type A-like protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_4543 hypothetical protein K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D Thivi_2298 FHA domain protein K11913 fha1; type VI secretion system protein D Thivi_2309 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Thivi_2789 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Thivi_3127 protein-export membrane protein, SecD/SecF family K03072 secD; preprotein translocase subunit SecD D Thivi_4188 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE D Thivi_3128 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Thivi_3910 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Thivi_4221 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Thivi_1917 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Thivi_2986 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Thivi_3126 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Thivi_3007 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Thivi_0059 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0088 twin arginine-targeting protein translocase, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA D Thivi_0087 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Thivi_1914 twin arginine targeting protein translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tvi02042] D Thivi_2990 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_2511 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_0053 putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_2989 CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D Thivi_0443 channel protein, hemolysin III family K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:tvi02022] D Thivi_0295 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Thivi_0294 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Thivi_2107 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Thivi_0560 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07776 regX3; two-component system, OmpR family, response regulator RegX3 D Thivi_4336 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Thivi_4335 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D Thivi_3691 Peroxiredoxin K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Thivi_3692 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D Thivi_0076 osmosensitive K+ channel histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Thivi_0781 signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D Thivi_0782 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18144 adeR; two-component system, OmpR family, response regulator AdeR D Thivi_0033 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Thivi_4463 signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Thivi_3860 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Thivi_0032 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Thivi_4474 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Thivi_4464 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02483 K02483; two-component system, OmpR family, response regulator D Thivi_2465 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_4248 signal transduction histidine kinase, nitrate/nitrite-specific K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Thivi_4249 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Thivi_2466 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Thivi_2222 response regulator of the LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Thivi_2795 signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Thivi_2794 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Thivi_3194 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Thivi_3193 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Thivi_3949 signal transduction histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D Thivi_3289 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thivi_3578 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D Thivi_4259 PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D Thivi_0380 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0310 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0317 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0327 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_4114 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_1224 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0376 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0308 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0326 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0329 CheY-like receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_4112 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_1225 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0314 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0381 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0320 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0323 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_4121 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_1218 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_2988 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_2576 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_0392 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Thivi_3303 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Thivi_3307 response regulator containing a CheY-like receiver domain and a GGDEF domain K02657 pilG; twitching motility two-component system response regulator PilG D Thivi_3306 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D Thivi_2359 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_2380 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_3251 bacteriophytochrome (light-regulated signal transduction histidine kinase) K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3] D Thivi_0849 PAS domain S-box K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_4079 PAS/PAC sensor signal transduction histidine kinase K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Thivi_0850 response regulator K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Thivi_1315 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_1437 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Thivi_0649 HPt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D Thivi_1213 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Thivi_2442 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K22010 pdtaR; two-component system, response regulator PdtaR D Thivi_4303 signal transduction histidine kinase K19694 chiS; two-component system, sensor histidine kinase ChiS D Thivi_0064 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_3770 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1831 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1009 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_3991 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1203 response regulator containing a CheY-like receiver domain and a GGDEF domain K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1205 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1206 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_1215 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_4164 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_2573 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_0647 signal transduction histidine kinase K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Thivi_0673 PAS domain S-box K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:tvi02035] D Thivi_0380 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0310 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0317 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0327 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_4114 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_1224 chemotaxis protein histidine kinase-like protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Thivi_0384 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0312 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0322 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4116 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_4118 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_1223 chemotaxis signal transduction protein K03408 cheW; purine-binding chemotaxis protein CheW D Thivi_0315 chemotaxis protein CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Thivi_0319 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_4120 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_1220 chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Thivi_0393 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0318 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0325 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_4119 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_1221 methylase of chemotaxis methyl-accepting protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Thivi_0381 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0320 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_0323 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_4121 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_1218 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Thivi_2988 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_2576 methylase of chemotaxis methyl-accepting protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Thivi_0376 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0308 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0326 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0329 CheY-like receiver domain-containing protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_4112 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_1225 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0314 response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Thivi_0377 chemotaxis protein K03414 cheZ; chemotaxis protein CheZ D Thivi_0392 chemotaxis signal transduction protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Thivi_1222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0311 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0321 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0330 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0307 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0036 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0418 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0643 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3014 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1154 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2355 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4111 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4115 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_4117 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1211 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_1219 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2100 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2443 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0439 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2264 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_2566 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0530 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_0559 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D Thivi_3160 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03776 aer; aerotaxis receptor D Thivi_0360 flagellar biosynthesis/type III secretory pathway protein K02411 fliH; flagellar assembly protein FliH D Thivi_0361 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Thivi_0362 Flagellar FliJ protein K02413 fliJ; flagellar protein FliJ D Thivi_0367 flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D Thivi_0368 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Thivi_0369 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Thivi_0370 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Thivi_0372 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Thivi_0371 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Thivi_0359 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Thivi_0365 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Thivi_0366 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D Thivi_0358 flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF K02409 fliF; flagellar M-ring protein FliF D Thivi_0402 flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Thivi_0391 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Thivi_0401 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Thivi_0364 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Thivi_1212 flagellar basal body-associated protein K02415 fliL; flagellar protein FliL D Thivi_0357 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Thivi_0363 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Thivi_0395 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Thivi_0396 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Thivi_0397 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Thivi_0399 flagellar hook-basal body protein K02391 flgF; flagellar basal-body rod protein FlgF D Thivi_0400 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D Thivi_0403 flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D Thivi_0398 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE D Thivi_0404 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D Thivi_0405 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL D Thivi_0389 FlgN protein K02399 flgN; flagellar biosynthesis protein FlgN D Thivi_0776 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0876 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_3150 flagellin/flagellar hook associated protein K02406 fliC; flagellin D Thivi_0774 flagellar capping protein K02407 fliD; flagellar hook-associated protein 2 D Thivi_0772 flagellar biosynthetic protein FliS K02422 fliS; flagellar secretion chaperone FliS D Thivi_0375 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Thivi_0382 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0352 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D Thivi_2208 flagellar motor component K02556 motA; chemotaxis protein MotA D Thivi_0383 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0351 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_2209 flagellar motor protein K02557 motB; chemotaxis protein MotB D Thivi_0356 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D Thivi_3121 hypothetical protein K13626 fliW; flagellar assembly factor FliW D Thivi_0390 anti-sigma-28 factor, FlgM family K02398 flgM; negative regulator of flagellin synthesis FlgM D Thivi_0773 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D Thivi_0775 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D Thivi_3879 hypothetical protein K02383 flbB; flagellar protein FlbB D Thivi_0373 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D Thivi_0374 ATPase involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG D Thivi_1018 ATPase involved in chromosome partitioning K04562 flhG; flagellar biosynthesis protein FlhG D Thivi_3307 response regulator containing a CheY-like receiver domain and a GGDEF domain K02657 pilG; twitching motility two-component system response regulator PilG D Thivi_3306 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K02658 pilH; twitching motility two-component system response regulator PilH D Thivi_3305 chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D Thivi_3304 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D Thivi_3303 chemotaxis protein histidine kinase-like protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Thivi_3578 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 pilR; two-component system, NtrC family, response regulator PilR D Thivi_3289 histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Thivi_0185 pilus retraction protein PilT K02669 pilT; twitching motility protein PilT D Thivi_3317 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Thivi_2863 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_2864 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_3316 pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Thivi_0799 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_2485 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA D Thivi_0184 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_0242 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_2761 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D Thivi_0241 type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D Thivi_0240 type 4 prepilin peptidase 1 K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Thivi_2729 type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D Thivi_2856 type IV pilus secretin PilQ/competence protein K02666 pilQ; type IV pilus assembly protein PilQ D Thivi_2855 Tfp pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D Thivi_2854 Tfp pilus assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO D Thivi_2853 Tfp pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D Thivi_2852 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Thivi_0025 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Thivi_2138 type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D Thivi_2139 Tfp pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW D Thivi_2140 Tfp pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX D Thivi_2141 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Thivi_2142 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE D Thivi_2201 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tvi04812] D Thivi_4549 putative dioxygenase K06990 MEMO1; MEMO1 family protein D Thivi_3826 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Thivi_2313 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thivi_2314 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Thivi_2709 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Thivi_2708 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Thivi_2707 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Thivi_0338 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_3960 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_1019 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_2601 ATPase involved in chromosome partitioning K03496 parA; chromosome partitioning protein D Thivi_2600 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tvi04147] D Thivi_0619 molecular chaperone of HSP90 family K04079 HSP90A; molecular chaperone HtpG D Thivi_3975 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Thivi_2347 glyceraldehyde-3-phosphate dehydrogenase (NAD+) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Thivi_2344 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Thivi_2343 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_2419 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Thivi_3350 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Thivi_0712 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_0661 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Thivi_4597 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D Thivi_0105 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Thivi_2265 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Thivi_4186 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_4199 translation elongation factor TU K02358 tuf; elongation factor Tu D Thivi_2710 HIT family hydrolase, diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Thivi_0989 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3753 AMP-forming long-chain acyl-CoA synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Thivi_3439 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Thivi_3579 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Thivi_0620 adenylate kinase family protein K00939 adk; adenylate kinase [EC:2.7.4.3] D Thivi_4449 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D Thivi_2221 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Thivi_2666 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Thivi_4144 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Thivi_2901 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Thivi_2797 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Thivi_3089 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Thivi_2122 phosphoglycerate dehydrogenase-like oxidoreductase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Thivi_1112 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Thivi_0001 pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_3404 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Thivi_0636 electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Thivi_0103 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Thivi_3909 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Thivi_0251 bacterial lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:tvi02048] D Thivi_4514 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_1073 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_0465 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1 D Thivi_1072 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Thivi_4513 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2 D Thivi_0466 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D Thivi_1079 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Thivi_0456 CRISPR-associated helicase, Cas3 family K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Thivi_4517 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D Thivi_4512 CRISPR-associated exonuclease, Cas4 family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Thivi_0457 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D Thivi_1078 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D Thivi_0458 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D Thivi_1077 CRISPR-associated protein Cse2 (CRISPR_cse2) K19046 casB; CRISPR system Cascade subunit CasB D Thivi_1076 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI K19124 casC; CRISPR system Cascade subunit CasC D Thivi_0459 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D Thivi_0460 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D Thivi_1075 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D Thivi_1074 CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI K19126 casE; CRISPR system Cascade subunit CasE D Thivi_0461 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE D Thivi_4521 CRISPR type III-B/RAMP module RAMP protein Cmr1 K07061 cmr1; CRISPR-associated protein Cmr1 D Thivi_4520 CRISPR-associated protein, Cmr2 family K19076 cmr2; CRISPR-associated protein Cmr2 D Thivi_4519 CRISPR-associated protein (Cas_Cmr3) K09127 cmr3; CRISPR-associated protein Cmr3 D Thivi_0591 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Thivi_1542 helicase, type I site-specific restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Thivi_2879 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Thivi_3905 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Thivi_0590 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Thivi_1546 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Thivi_2874 type I restriction system adenine methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thivi_3907 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thivi_0587 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thivi_1547 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thivi_0913 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Thivi_3144 adenine specific DNA methylase Mod K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Thivi_3526 DNA modification methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D Thivi_3589 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Thivi_1105 DNA/RNA helicase, superfamily II K01156 res; type III restriction enzyme [EC:3.1.21.5] D Thivi_4342 restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5] D Thivi_3147 Type III restriction enzyme, res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D Thivi_1104 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Thivi_4133 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Thivi_4337 adenine specific DNA methylase Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Thivi_3853 restriction endonuclease K07448 mrr; restriction system protein D Thivi_3973 restriction endonuclease K07448 mrr; restriction system protein D Thivi_0713 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_0124 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_3895 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_1503 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_4554 growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_0818 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_2636 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Thivi_0714 growth regulator K07172 mazE; antitoxin MazE D Thivi_3885 growth inhibitor K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D Thivi_2493 growth inhibitor K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D Thivi_2492 growth regulator K18842 chpS; antitoxin ChpS D Thivi_0819 regulator of stationary/sporulation gene expression K19156 prlF; antitoxin PrlF D Thivi_3107 looped-hinge helix DNA binding domain, AbrB family K19156 prlF; antitoxin PrlF D Thivi_1642 looped-hinge helix DNA binding domain, AbrB family K19156 prlF; antitoxin PrlF D Thivi_4619 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE D Thivi_1543 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE D Thivi_3108 prevent-host-death family protein K18923 stbD; antitoxin StbD D Thivi_4340 addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D Thivi_1639 hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D Thivi_4341 addiction module antitoxin, RelB/DinJ family K07473 dinJ; DNA-damage-inducible protein J D Thivi_1513 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-] D Thivi_2382 YcfA-like protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D Thivi_2381 hypothetical protein K18843 hicB; antitoxin HicB D Thivi_1782 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D Thivi_1477 death-on-curing family protein K07341 doc; death on curing protein D Thivi_0429 plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D Thivi_0430 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D Thivi_0174 addiction module antidote protein, HigA family K21498 higA-1; antitoxin HigA-1 D Thivi_1428 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Thivi_1738 putative nucleic acid-binding protein, contains PIN domain K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D Thivi_1739 virulence-associated protein K18829 mvpT; antitoxin VapB D Thivi_1427 virulence-associated protein K18829 mvpT; antitoxin VapB D Thivi_2810 virulence-associated protein K18829 mvpT; antitoxin VapB D Thivi_1662 hypothetical protein K19687 vapB; antitoxin VapB D Thivi_3221 hypothetical protein K21495 fitA; antitoxin FitA D Thivi_2313 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Thivi_3826 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Thivi_4562 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Thivi_4353 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Thivi_3840 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Thivi_4344 hypothetical protein K19168 cptA; toxin CptA D Thivi_4345 hypothetical protein K09159 cptB; antitoxin CptB D Thivi_0485 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Thivi_2473 putative sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC D Thivi_2474 DNA sulfur modification protein DndD K19171 dndD; DNA sulfur modification protein DndD D Thivi_0826 putative ATPase K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:tvi04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tvi04090] C 01504 Antimicrobial resistance genes [BR:tvi01504] D Thivi_4336 signal transduction histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D Thivi_4335 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K07660 phoP; two-component system, OmpR family, response regulator PhoP D Thivi_2767 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2799 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2802 RND family efflux transporter, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_4560 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D Thivi_2801 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_2766 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_4559 cation/multidrug efflux pump K18138 acrB; multidrug efflux pump D Thivi_2798 hydrophobe/amphiphile efflux-1 (HAE1) family transporter K18138 acrB; multidrug efflux pump D Thivi_4362 transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D Thivi_0781 signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3] D Thivi_0782 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain K18144 adeR; two-component system, OmpR family, response regulator AdeR D Thivi_1752 type I secretion outer membrane protein, TolC family K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tvi00537] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tvi03100] D Thivi_1908 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_4024 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_2650 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_0991 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_1919 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Thivi_0803 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_1353 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_2361 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_4492 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Thivi_3549 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Thivi_0633 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Thivi_2433 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Thivi_3601 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thivi_4177 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Thivi_0990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thivi_0095 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Thivi_4367 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_3752 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_4184 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Thivi_1352 tRNA-His K14226 tRNA-His; tRNA His D Thivi_1909 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_2651 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_4023 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Thivi_3911 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_0517 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3004 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3645 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_3799 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Thivi_1351 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thivi_4448 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Thivi_2468 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_4085 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_4603 tRNA-Met K14230 tRNA-Met; tRNA Met D Thivi_2662 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Thivi_1354 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_1557 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_2547 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Thivi_0569 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_0741 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_2890 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_0230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Thivi_1577 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_1593 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_4185 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_0199 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Thivi_4187 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Thivi_4183 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Thivi_0632 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_1566 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_2420 tRNA-Val K14237 tRNA-Val; tRNA Val D Thivi_1910 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_4022 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_2652 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Thivi_1907 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_4025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_2649 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Thivi_1906 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_2648 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_4026 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Thivi_2714 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA D Thivi_2328 Bacterial RNase P class A K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Thivi_3821 glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D Thivi_2391 indolepyruvate ferredoxin oxidreductase, alpha/beta subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Thivi_2392 2-oxoacid:ferredoxin oxidoreductase, gamma subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Thivi_2769 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Thivi_2770 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Thivi_2130 putative flavoprotein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D Thivi_3845 Zn-dependent oxidoreductase, NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Thivi_4578 NADPH-glutathione reductase K23076 garB; glutathione amide reductase [EC:1.8.1.16] D Thivi_3993 cytochrome c K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D Thivi_3072 methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Thivi_3791 methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D Thivi_1326 methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Thivi_0218 cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D Thivi_4579 peroxiredoxin K23075 garA; glutathione amide-dependent peroxidase [EC:1.11.1.17] D Thivi_1199 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Thivi_1841 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Thivi_1131 coenzyme F420-reducing hydrogenase, alpha subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D Thivi_1129 coenzyme F420-reducing hydrogenase, gamma subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D Thivi_3031 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Thivi_1803 ferritin-like protein K02217 ftnA; ferritin [EC:1.16.3.2] D Thivi_0891 flavodoxin reductase family protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Thivi_1667 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Thivi_1178 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Thivi_3073 pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Thivi_2913 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Thivi_4567 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-] D Thivi_2911 hydrogenase 4 membrane component (E) K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D Thivi_2910 formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D Thivi_4478 protein-L-isoaspartate and D-aspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Thivi_1748 protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Thivi_0482 protein-L-isoaspartate and D-aspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Thivi_3205 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Thivi_4127 methyltransferase, cyclopropane fatty acid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Thivi_0882 hypothetical protein K05303 K05303; O-methyltransferase [EC:2.1.1.-] D Thivi_2260 Fe-S oxidoreductase K22704 hpnR; hopanoid C-3 methylase [EC:2.1.1.-] D Thivi_3614 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Thivi_3776 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D Thivi_2608 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D Thivi_2616 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D Thivi_0945 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Thivi_0155 transglutaminase-like enzyme, predicted cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Thivi_3627 transglutaminase-like enzyme, predicted cysteine protease K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Thivi_0946 putative arginyl-tRNA:protein arginylyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Thivi_2480 glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Thivi_3646 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] D Thivi_0709 putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Thivi_0479 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Thivi_0058 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Thivi_1826 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Thivi_3309 membrane-associated lipoprotein involved in thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Thivi_1360 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Thivi_4587 polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D Thivi_0738 glutamine synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Thivi_1193 hypothetical protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Thivi_2812 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Thivi_1660 Retron-type reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Thivi_0696 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Thivi_3997 isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D Thivi_2238 serine kinase of the HPr protein, regulates carbohydrate metabolism K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Thivi_2192 hypothetical protein K22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40] D Thivi_1796 tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Thivi_1152 putative metal-dependent phosphoesterase, PHP family K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Thivi_3798 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Thivi_0854 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Thivi_1010 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_1202 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_1719 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_2378 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_1216 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_1207 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_4163 response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_4592 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Thivi_1388 alkyl sulfatase-like hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D Thivi_0026 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Thivi_1808 Mg-dependent DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Thivi_3515 phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D Thivi_2134 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24] D Thivi_2039 negative regulator of beta-lactamase expression K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Thivi_3198 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Thivi_3366 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Thivi_4102 putative amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D Thivi_4623 MAF protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Thivi_0153 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Thivi_0210 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Thivi_2069 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Thivi_2604 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Thivi_4228 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Thivi_3998 yjeF-like protein, hydroxyethylthiazole kinase-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Thivi_0044 cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Thivi_0045 UDP-N-acetylmuramyl tripeptide synthase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Thivi_3616 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Thivi_3115 ATP dependent DNA ligase-like protein K26441 lig; DNA ligase [EC:6.5.1.1] D Thivi_0070 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Thivi_3182 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Thivi_1934 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Thivi_3397 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Thivi_0071 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Thivi_3181 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Thivi_1932 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Thivi_3396 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Thivi_0072 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Thivi_3179 putative NADH:ubiquinone oxidoreductase, subunit RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Thivi_1931 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Thivi_3395 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Thivi_1040 P-type ATPase, translocating K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Thivi_2279 ferredoxin K05337 fer; ferredoxin D Thivi_0069 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Thivi_3183 putative NADH:ubiquinone oxidoreductase, subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Thivi_1935 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Thivi_3398 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Thivi_0068 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Thivi_3184 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Thivi_1936 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Thivi_3399 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Thivi_0073 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Thivi_3185 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Thivi_1930 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Thivi_3394 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Thivi_0486 Modular FeS cluster scaffolding protein NifU K13819 K13819; NifU-like protein D Thivi_2133 NifQ K15790 nifQ; nitrogen fixation protein NifQ D Thivi_1679 CitB domain protein K13795 citB; citrate/tricarballylate utilization protein D Thivi_1678 precorrin 3B synthase CobZ K13796 cobZ; tricarballylate dehydrogenase D Thivi_2455 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D Thivi_4235 nitric oxide reductase activation protein K02448 norD; nitric oxide reductase NorD protein D Thivi_1574 nitric oxide reductase activation protein K02448 norD; nitric oxide reductase NorD protein D Thivi_1572 ATPase family protein associated with various cellular activities (AAA) K04748 norQ; nitric oxide reductase NorQ protein D Thivi_2803 ATPase family protein associated with various cellular activities (AAA) K04748 norQ; nitric oxide reductase NorQ protein D Thivi_4237 MoxR-like ATPase K04748 norQ; nitric oxide reductase NorQ protein D Thivi_4246 uncharacterized protein involved in formation of periplasmic nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D Thivi_2738 hypothetical protein K02596 nifX; nitrogen fixation protein NifX D Thivi_3650 putative nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT D Thivi_0487 NifZ domain-containing protein K02597 nifZ; nitrogen fixation protein NifZ D Thivi_4293 NifZ domain-containing protein K02597 nifZ; nitrogen fixation protein NifZ D Thivi_2127 nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D Thivi_2739 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN K02592 nifN; nitrogenase molybdenum-iron protein NifN D Thivi_2740 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Thivi_3114 FAD binding protein K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D Thivi_3113 putative adenylylsulfate reductase-associated electron transfer protein QmoB K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D Thivi_1464 flavodoxin, long chain K03839 fldA; flavodoxin I D Thivi_0494 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit K14086 echA; ech hydrogenase subunit A D Thivi_0495 formate hydrogenlyase subunit 4 K14087 echB; ech hydrogenase subunit B D Thivi_0496 Ni,Fe-hydrogenase III small subunit K14088 echC; ech hydrogenase subunit C D Thivi_0497 NADH:ubiquinone oxidoreductase 27 kD subunit K14089 echD; ech hydrogenase subunit D D Thivi_0498 Ni,Fe-hydrogenase III large subunit K14090 echE; ech hydrogenase subunit E D Thivi_0499 ech hydrogenase subunit F K14091 echF; ech hydrogenase subunit F D Thivi_1050 putative subunit of the multisubunit Na+/H+ antiporter K14113 ehbD; energy-converting hydrogenase B subunit D D Thivi_4483 nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit K02569 napC; cytochrome c-type protein NapC D Thivi_4241 nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit K02569 napC; cytochrome c-type protein NapC D Thivi_4244 periplasmic nitrate reductase subunit NapG K02573 napG; ferredoxin-type protein NapG D Thivi_4243 ferredoxin-type protein, NapH/MauN family K02574 napH; ferredoxin-type protein NapH D Thivi_0635 electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit D Thivi_4292 Nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D Thivi_3836 hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN D Thivi_0549 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Thivi_4017 uncharacterized protein involved in cysteine biosynthesis K06203 cysZ; CysZ protein D Thivi_3346 lactoylglutathione lyase-like lyase K08234 yaeR; glyoxylase I family protein D Thivi_3329 pyridoxal phosphate enzyme, YggS family K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Thivi_0534 putative N-acetylglucosaminyl transferase K19804 lapB; lipopolysaccharide assembly protein B D Thivi_4586 putative integral membrane protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Thivi_1730 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Thivi_1731 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Thivi_3467 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Thivi_0698 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Thivi_3191 molybdopterin guanine dinucleotide biosynthesis accessory protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D Thivi_4547 putative magnesium chelatase accessory protein K06049 bchO; magnesium chelatase accessory protein C 99988 Secondary metabolism C 99999 Others D Thivi_0599 acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Thivi_1723 cold shock protein K03704 cspA; cold shock protein D Thivi_4573 cold shock protein K03704 cspA; cold shock protein D Thivi_4305 cold shock protein K03704 cspA; cold shock protein D Thivi_3469 nitrogen regulatory protein PII K04752 glnK; nitrogen regulatory protein P-II 2 D Thivi_0007 transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D Thivi_4574 hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Thivi_0627 trigger factor K03545 tig; trigger factor D Thivi_2082 urease accessory protein UreE K03187 ureE; urease accessory protein D Thivi_2081 urease accessory protein UreF K03188 ureF; urease accessory protein D Thivi_2080 urease accessory protein UreG K03189 ureG; urease accessory protein D Thivi_2086 urease accessory protein UreH K03190 ureD; urease accessory protein D Thivi_3908 SsrA-binding protein K03664 smpB; SsrA-binding protein D Thivi_3697 hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC D Thivi_4359 Hydrogenase maturation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D Thivi_3698 Hydrogenase maturation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Thivi_3700 Hydrogenase maturation protein, carbamoyl dehydratase HypE K04655 hypE; hydrogenase expression/formation protein HypE D Thivi_3071 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Thivi_3466 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Thivi_1402 putative proteasome-type protease K07395 K07395; putative proteasome-type protease D Thivi_3594 putative redox protein, regulator of disulfide bond formation K07397 yhfA; putative redox protein C 99976 Replication and repair D Thivi_3486 putative site-specific integrase-resolvase K07450 K07450; putative resolvase D Thivi_3496 hypothetical protein K07454 K07454; putative restriction endonuclease D Thivi_2719 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D Thivi_4504 putative endonuclease III-like protein K07457 K07457; endonuclease III related protein D Thivi_2331 TIGR00252 family protein K07460 yraN; putative endonuclease D Thivi_1938 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease D Thivi_3200 DNA protecting protein DprA K04096 smf; DNA processing protein D Thivi_4298 AAA ATPase K07478 ycaJ; putative ATPase D Thivi_1585 DNA/RNA helicase, superfamily II K06919 K06919; putative DNA primase/helicase D Thivi_1552 hypothetical protein K06919 K06919; putative DNA primase/helicase D Thivi_2368 putative ATPase K06919 K06919; putative DNA primase/helicase D Thivi_2645 hypothetical protein K06919 K06919; putative DNA primase/helicase D Thivi_1553 DNA/RNA helicase, superfamily II K06919 K06919; putative DNA primase/helicase D Thivi_4381 DNA/RNA helicase, superfamily II K06919 K06919; putative DNA primase/helicase D Thivi_0055 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_0150 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_3851 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_0999 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_2008 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_2097 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_2098 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_4161 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_1310 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_2198 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_3481 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_3490 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_3509 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_0583 transposase, IS1 family K07480 insB; insertion element IS1 protein InsB D Thivi_0133 hypothetical protein K07483 K07483; transposase D Thivi_1299 transposase K07483 K07483; transposase D Thivi_2653 transposase K07483 K07483; transposase D Thivi_4369 Transposase K07483 K07483; transposase D Thivi_1612 hypothetical protein K07483 K07483; transposase D Thivi_2946 transposase K07486 K07486; transposase D Thivi_2486 transposase K07486 K07486; transposase D Thivi_1298 transposase IS116/IS110/IS902 family K07486 K07486; transposase D Thivi_2948 hypothetical protein K07488 K07488; transposase D Thivi_0833 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_0851 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_1952 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_1248 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_1295 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_2067 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_2416 transposase K07491 rayT; REP-associated tyrosine transposase D Thivi_3506 integrase family protein K07497 K07497; putative transposase D Thivi_4390 integrase family protein K07497 K07497; putative transposase D Thivi_0801 transposase K07497 K07497; putative transposase D Thivi_2490 transposase K07497 K07497; putative transposase D Thivi_4379 transposase K07497 K07497; putative transposase D Thivi_2656 transposase K07497 K07497; putative transposase D Thivi_3603 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D Thivi_2457 phage shock protein A (IM30), suppresses sigma54-dependent transcription K03969 pspA; phage shock protein A D Thivi_2712 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Thivi_0298 phosphate/sulfate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D Thivi_1878 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Thivi_0936 SNF family Na+-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D Thivi_0771 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D Thivi_1280 Intracellular septation protein A K06190 ispZ; intracellular septation protein D Thivi_0233 hypothetical protein K06415 spoVR; stage V sporulation protein R D Thivi_2786 membrane-bound metallopeptidase K22719 envC; murein hydrolase activator C 99993 Cell motility C 99995 Signaling proteins D Thivi_3881 putative stress response protein, TerZ- and CABP1 K05792 terA; tellurite resistance protein TerA D Thivi_2170 uncharacterized protein involved in stress response K05792 terA; tellurite resistance protein TerA D Thivi_2164 putative stress response protein, TerZ- and CABP1 K05795 terD; tellurium resistance protein TerD D Thivi_2169 putative stress response protein, TerZ- and CABP1 K05795 terD; tellurium resistance protein TerD D Thivi_2166 putative stress response protein, TerZ- and CABP1 K05791 terZ; tellurium resistance protein TerZ D Thivi_0810 universal stress protein UspA-like protein K06149 uspA; universal stress protein A D Thivi_2070 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein D Thivi_1722 CBS-domain-containing membrane protein K07168 K07168; CBS domain-containing membrane protein D Thivi_1852 phosphate starvation-inducible protein PhoH, predicted ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Thivi_1200 PhoH family protein K07175 phoH2; PhoH-like ATPase D Thivi_0231 putative Ser protein kinase K07180 prkA; serine protein kinase D Thivi_0246 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein D Thivi_2106 putative signal-transduction protein containing cAMP-binding and CBS domains K07182 K07182; CBS domain-containing protein D Thivi_1871 SH3 domain protein K07184 ygiM; SH3 domain protein D Thivi_0287 KaiB domain-containing protein K08481 kaiB; circadian clock protein KaiB D Thivi_0288 KaiB domain-containing protein K08481 kaiB; circadian clock protein KaiB D Thivi_0286 RecA-superfamily ATPase possibly involved in signal transduction K08482 kaiC; circadian clock protein KaiC D Thivi_3724 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein D Thivi_3393 nitrogen fixation negative regulator NifL K23916 nifL; nitrogen fixation regulatory protein C 99992 Structural proteins D Thivi_4299 periplasmic chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D Thivi_1859 surface lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Thivi_2754 outer membrane protein K06142 hlpA; outer membrane protein D Thivi_1811 outer membrane protein K06142 hlpA; outer membrane protein D Thivi_0483 membrane-bound metallopeptidase K06194 nlpD; lipoprotein NlpD D Thivi_3336 capsule polysaccharide export protein K07265 kpsS; capsular polysaccharide export protein D Thivi_1067 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein D Thivi_1068 starvation-inducible outer membrane lipoprotein K07285 slp; outer membrane lipoprotein D Thivi_1821 multidrug resistance efflux pump K01993 ABC-2.TX; HlyD family secretion protein D Thivi_0760 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Thivi_0931 RND family efflux transporter, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein D Thivi_1399 putative permease K11744 tqsA; AI-2 transport protein TqsA D Thivi_2565 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D Thivi_3068 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Thivi_3064 cytochrome c-type biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Thivi_3065 uncharacterized protein involved in biosynthesis of c-type cytochromes K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Thivi_2728 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Thivi_3049 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Thivi_2126 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Thivi_0528 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Thivi_1276 periplasmic glucans biosynthesis protein K03670 mdoG; periplasmic glucans biosynthesis protein D Thivi_2171 tellurite resistance protein K05793 terB; tellurite resistance protein TerB D Thivi_2923 integral membrane protein, TerC family K05794 terC; tellurite resistance protein TerC D Thivi_1095 uncharacterized protein involved in tolerance to divalent cations K03926 cutA; periplasmic divalent cation tolerance protein D Thivi_0468 uncharacterized protein affecting Mg2+/Co2+ transport K06195 apaG; ApaG protein D Thivi_2144 hemerythrin-like metal-binding domain-containing protein K07216 hr; hemerythrin D Thivi_3258 hemerythrin-like metal-binding domain-containing protein K07216 hr; hemerythrin D Thivi_4169 putative heme degradation protein K07225 hmuS; putative hemin transport protein D Thivi_0115 putative heme iron utilization protein K07227 chuX; heme iron utilization protein D Thivi_0141 Imelysin K07231 K07231; putative iron-regulated protein D Thivi_1715 uncharacterized protein involved in response to NO K07234 K07234; uncharacterized protein involved in response to NO D Thivi_0101 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D Thivi_0655 putative membrane protein, required for colicin V production K03558 cvpA; membrane protein required for colicin V production D Thivi_0028 qaraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D Thivi_2558 putative periplasmic or secreted lipoprotein K04065 osmY; hyperosmotically inducible periplasmic protein D Thivi_3902 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Thivi_1370 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Thivi_4089 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein D Thivi_3081 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D Thivi_3083 Iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein D Thivi_1087 Iron-regulated ABC transporter membrane component SufB K09014 sufB; Fe-S cluster assembly protein SufB D Thivi_1085 Iron-regulated ABC transporter permease protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D Thivi_1066 putative membrane protein K07058 K07058; membrane protein D Thivi_1094 protein affecting phage T7 exclusion by the F plasmid K07113 fxsA; UPF0716 protein FxsA D Thivi_3286 SufE protein probably involved in Fe-S center assembly K02426 sufE; cysteine desulfuration protein SufE D Thivi_4544 uncharacterized protein involved in purine metabolism K07153 hflD; high frequency lysogenization protein D Thivi_0444 hypothetical protein K03745 slyX; SlyX protein D Thivi_3201 hypothetical protein K03747 smg; Smg protein D Thivi_2833 hypothetical protein K05805 creA; CreA protein D Thivi_0654 hypothetical protein K03749 dedD; DedD protein D Thivi_0171 hypothetical protein K03112 damX; DamX protein D Thivi_0341 sporulation related protein K03112 damX; DamX protein D Thivi_1923 hypothetical protein K03112 damX; DamX protein D Thivi_0027 putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D Thivi_0852 hypothetical protein K09858 K09858; SEC-C motif domain protein D Thivi_3941 cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein D Thivi_3756 HupH hydrogenase expression protein K03618 hyaF; hydrogenase-1 operon protein HyaF D Thivi_2697 HupH hydrogenase expression protein K03618 hyaF; hydrogenase-1 operon protein HyaF D Thivi_4558 putative membrane protein K13256 psiE; protein PsiE D Thivi_2157 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA C 99997 Function unknown D Thivi_3930 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D Thivi_4482 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D Thivi_0767 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein D Thivi_1242 radical SAM additional 4Fe4S-binding domain protein K06871 K06871; uncharacterized protein D Thivi_0865 prolyl oligopeptidase family protein K06889 K06889; uncharacterized protein D Thivi_3344 putative ATPase (AAA+ superfamily) K06923 K06923; uncharacterized protein D Thivi_0857 putative CoA-binding protein K06929 K06929; uncharacterized protein D Thivi_0858 putative DNA-binding protein K06933 K06933; uncharacterized protein D Thivi_4007 hypothetical protein K06940 K06940; uncharacterized protein D Thivi_2614 Uncharacterized protein family (UPF0153) K06940 K06940; uncharacterized protein D Thivi_1787 putative Fe-S oxidoreductase K06940 K06940; uncharacterized protein D Thivi_0440 putative GTPase K06946 K06946; uncharacterized protein D Thivi_4125 putative NAD/FAD-binding protein K06954 K06954; uncharacterized protein D Thivi_2194 putative deacetylase K06986 K06986; uncharacterized protein D Thivi_3218 putative deacylase K06987 K06987; uncharacterized protein D Thivi_0009 putative double-glycine peptidase K06992 K06992; uncharacterized protein D Thivi_0750 putative enzyme of the cupin superfamily K06995 K06995; uncharacterized protein D Thivi_1091 lactoylglutathione lyase family protein K06996 K06996; uncharacterized protein D Thivi_4267 putative RND superfamily exporter K07003 K07003; uncharacterized protein D Thivi_3786 putative extracellular nuclease K07004 K07004; uncharacterized protein D Thivi_1644 putative flavin-nucleotide-binding protein K07005 K07005; uncharacterized protein D Thivi_4469 flavodoxin reductase family protein K07006 K07006; uncharacterized protein D Thivi_1753 putative hydrolase of the alpha/beta-hydrolase fold protein K07019 K07019; uncharacterized protein D Thivi_1828 hypothetical protein K07028 K07028; uncharacterized protein D Thivi_1969 putative membrane protein K07034 K07034; uncharacterized protein D Thivi_2218 putative metalloprotease K07054 K07054; uncharacterized protein D Thivi_1192 putative nucleic acid-binding protein, contains PIN domain K07065 K07065; uncharacterized protein D Thivi_2041 putative nucleotidyltransferase K07075 K07075; uncharacterized protein D Thivi_1664 putative permease K07089 K07089; uncharacterized protein D Thivi_0061 putative permease K07090 K07090; uncharacterized protein D Thivi_4556 putative permease K07090 K07090; uncharacterized protein D Thivi_2732 putative phosphatase K07093 K07093; uncharacterized protein D Thivi_3846 phosphoesterase, MJ0936 family K07095 K07095; uncharacterized protein D Thivi_0226 putative phosphohydrolase K07098 K07098; uncharacterized protein D Thivi_2358 SET domain-containing protein K07117 K07117; uncharacterized protein D Thivi_2330 putative lipoprotein K07121 K07121; uncharacterized protein D Thivi_3684 Sel1 repeat protein K07126 K07126; uncharacterized protein D Thivi_0523 Sel1 repeat protein K07126 K07126; uncharacterized protein D Thivi_2631 Sel1 repeat protein K07126 K07126; uncharacterized protein D Thivi_0800 Sel1 repeat protein K07126 K07126; uncharacterized protein D Thivi_1262 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein D Thivi_3284 peptidase S16, lon domain protein K07157 K07157; uncharacterized protein D Thivi_3006 hypothetical protein K08998 K08998; uncharacterized protein D Thivi_4082 hypothetical protein K09117 K09117; uncharacterized protein D Thivi_3332 hypothetical protein K09131 K09131; uncharacterized protein D Thivi_2528 hypothetical protein K09137 K09137; uncharacterized protein D Thivi_4548 hypothetical protein K09141 K09141; uncharacterized protein D Thivi_3834 hypothetical protein K09158 K09158; uncharacterized protein D Thivi_1365 hypothetical protein K09160 K09160; uncharacterized protein D Thivi_3051 hypothetical protein K09700 K09700; uncharacterized protein D Thivi_4126 hypothetical protein K09701 K09701; uncharacterized protein D Thivi_2902 hypothetical protein K09768 K09768; uncharacterized protein D Thivi_1281 hypothetical protein K09780 K09780; uncharacterized protein D Thivi_0697 hypothetical protein K09781 K09781; uncharacterized protein D Thivi_0232 hypothetical protein K09786 K09786; uncharacterized protein D Thivi_0950 hypothetical protein K09790 K09790; uncharacterized protein D Thivi_1069 hypothetical protein K09791 K09791; uncharacterized protein D Thivi_3333 hypothetical protein K09792 K09792; uncharacterized protein D Thivi_1823 hypothetical protein K09794 K09794; uncharacterized protein D Thivi_0067 hypothetical protein K09801 K09801; uncharacterized protein D Thivi_0934 hypothetical protein K09801 K09801; uncharacterized protein D Thivi_3400 hypothetical protein K09801 K09801; uncharacterized protein D Thivi_1232 hypothetical protein K09803 K09803; uncharacterized protein D Thivi_0029 hypothetical protein K09857 K09857; uncharacterized protein D Thivi_3899 hypothetical protein K09862 K09862; uncharacterized protein D Thivi_3386 hypothetical protein K09895 K09895; uncharacterized protein D Thivi_1810 hypothetical protein K09912 K09912; uncharacterized protein D Thivi_4526 hypothetical protein K09915 K09915; uncharacterized protein D Thivi_1038 hypothetical protein K09918 K09918; uncharacterized protein D Thivi_0944 hypothetical protein K09919 K09919; uncharacterized protein D Thivi_0622 hypothetical protein K09920 K09920; uncharacterized protein D Thivi_2389 hypothetical protein K09921 K09921; uncharacterized protein D Thivi_0723 hypothetical protein K09928 K09928; uncharacterized protein D Thivi_0414 hypothetical protein K09937 K09937; uncharacterized protein D Thivi_3413 hypothetical protein K09941 K09941; uncharacterized protein D Thivi_0176 hypothetical protein K09947 K09947; uncharacterized protein D Thivi_1860 hypothetical protein K09973 K09973; uncharacterized protein D Thivi_0299 TIGR00153 family protein K07220 K07220; uncharacterized protein D Thivi_0178 putative periplasmic lipoprotein K07338 K07338; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024