+E Replication protein KO
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DNA Replication Proteins - Xiphophorus couchianus (Monterrey platyfish)
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
D 114141462 orc1; origin recognition complex subunit 1 isoform X1 K02603 ORC1; origin recognition complex subunit 1
D 114146996 orc2; origin recognition complex subunit 2 isoform X1 K02604 ORC2; origin recognition complex subunit 2
D 114134689 orc3; origin recognition complex subunit 3 K02605 ORC3; origin recognition complex subunit 3
D 114141014 orc4; origin recognition complex subunit 4 isoform X1 K02606 ORC4; origin recognition complex subunit 4
D 114160658 orc5; origin recognition complex subunit 5 isoform X1 K02607 ORC5; origin recognition complex subunit 5
D 114137813 cdt1; DNA replication factor Cdt1 K10727 CDT1; chromatin licensing and DNA replication factor 1
D 114144572 cdc6; cell division control protein 6 homolog K02213 CDC6; cell division control protein 6
D 114136109 mcm2; DNA replication licensing factor MCM2 K02540 MCM2; DNA replication licensing factor MCM2 [EC:5.6.2.3]
D 114159065 mcm3; DNA replication licensing factor MCM3 K02541 MCM3; DNA replication licensing factor MCM3 [EC:5.6.2.3]
D 114146649 mcm4; DNA replication licensing factor MCM4 K02212 MCM4; DNA replication licensing factor MCM4 [EC:5.6.2.3]
D 114159703 mcm5; DNA replication licensing factor MCM5 K02209 MCM5; DNA replication licensing factor MCM5 [EC:5.6.2.3]
D 114147154 mcm6; DNA replication licensing factor MCM6 K02542 MCM6; DNA replication licensing factor MCM6 [EC:5.6.2.3]
D 114138799 mcm7; DNA replication licensing factor MCM7 isoform X1 K02210 MCM7; DNA replication licensing factor MCM7 [EC:5.6.2.3]
C CDK (cyclin dependent kinase)
D 114139206 ccna2; cyclin-A2 K06627 CCNA; cyclin-A
D 114152717 ccna1; cyclin-A1 isoform X1 K06627 CCNA; cyclin-A
D 114142529 ccne1; G1/S-specific cyclin-E1 isoform X1 K06626 CCNE; G1/S-specific cyclin-E1
D 114139015 ccne2; G1/S-specific cyclin-E2 K06626 CCNE; G1/S-specific cyclin-E1
D 114135983 cdk2; cyclin-dependent kinase 2 K02206 CDK2; cyclin-dependent kinase 2 [EC:2.7.11.22]
C DDK (Dbf-4 dependent kinase)
D 114147159 cdc7; cell division cycle 7-related protein kinase isoform X1 K02214 CDC7; cell division control protein 7 [EC:2.7.11.1]
D 114138392 dbf4; protein DBF4 homolog A K06629 DBF4; protein DBF4
D 114152387 protein DBF4 homolog B-like isoform X1 K06629 DBF4; protein DBF4
C GINS complex
D 114138075 gins1; DNA replication complex GINS protein PSF1 K10732 GINS1; GINS complex subunit 1
D 114143246 gins2; DNA replication complex GINS protein PSF2 K10733 GINS2; GINS complex subunit 2
D 114151119 gins3; DNA replication complex GINS protein PSF3 K10734 GINS3; GINS complex subunit 3
D 114155118 gins4; DNA replication complex GINS protein SLD5 K10735 GINS4; GINS complex subunit 4
C Other initiation factors
D 114137102 topbp1; DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D 114156654 recql4; ATP-dependent DNA helicase Q4 isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D 114155222 cdc45; cell division control protein 45 homolog isoform X1 K06628 CDC45; cell division control protein 45
D 114138370 DNA helicase MCM8-like isoform X1 K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
D 114158919 mcm9; DNA helicase MCM9 K10738 MCM9; DNA helicase MCM9 [EC:5.6.2.4]
D 114161036 mcm10; protein MCM10 homolog isoform X1 K10736 MCM10; minichromosome maintenance protein 10
D 114157454 protein FAM111A-like K24274 FAM111A; protein FAM111A
D 114153829 protein FAM111A-like K24274 FAM111A; protein FAM111A
D 114156815 protein FAM111A-like K24274 FAM111A; protein FAM111A
D 114155895 cinp; cyclin-dependent kinase 2-interacting protein isoform X1 K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 114142141 mtbp; mdm2-binding protein K26116 MTBP; Mdm2-binding protein
D 114158546 ticrr; treslin isoform X1 K26117 TICRR; Treslin
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
D 114137039 pola1; DNA polymerase alpha catalytic subunit isoform X1 K02320 POLA1; DNA polymerase alpha subunit A [EC:2.7.7.7]
D 114139671 pola2; DNA polymerase alpha subunit B K02321 POLA2; DNA polymerase alpha subunit B
D 114139013 prim1; DNA primase small subunit isoform X1 K02684 PRI1; DNA primase small subunit [EC:2.7.7.102]
D 114137778 prim2; DNA primase large subunit K02685 PRI2; DNA primase large subunit
C DNA polymerase epsilon complex
D 114154255 pole; DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
D 114133866 pole2; DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
D 114143694 pole3; DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
D 114150365 pole4; DNA polymerase epsilon subunit 4 K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
C DNA polymerase delta complex
D 114160466 pold1; DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
D 114154082 pold2; DNA polymerase delta subunit 2 K02328 POLD2; DNA polymerase delta subunit 2
D 114147227 pold3; DNA polymerase delta subunit 3 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
D 114144947 pold4; DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
C DNA polymerase gamma complex (mitochondrial)
D 114162014 polg; DNA polymerase subunit gamma-1 isoform X1 K02332 POLG; DNA polymerase gamma 1 [EC:2.7.7.7]
D 114144117 polg2; DNA polymerase subunit gamma-2, mitochondrial isoform X1 K02333 POLG2; DNA polymerase gamma 2
C RPA (replication protein A)
D 114153522 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
D 114133454 rpa1; replication protein A 70 kDa DNA-binding subunit isoform X1 K07466 RFA1; replication factor A1
D 114155489 replication protein A 32 kDa subunit-like K10739 RFA2; replication factor A2
D 114139588 rpa2; replication protein A 32 kDa subunit isoform X1 K10739 RFA2; replication factor A2
D 114155653 rpa3; replication protein A 14 kDa subunit K10740 RPA3; replication factor A3
C RFC (replication factor C)
D 114144787 rfc1; replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
D 114150715 rfc4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 114140816 rfc2; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 114153693 rfc3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 114154849 rfc5; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
C RNase H
D 114158974 rnaseh1; ribonuclease H1 K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D 114144162 rnaseh2a; ribonuclease H2 subunit A K10743 RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]
D 114148680 rnaseh2b; ribonuclease H2 subunit B isoform X1 K10744 RNASEH2B; ribonuclease H2 subunit B
D 114139036 ribonuclease H2 subunit C-like K10745 RNASEH2C; ribonuclease H2 subunit C
D 114139037 ribonuclease H2 subunit C-like isoform X1 K10745 RNASEH2C; ribonuclease H2 subunit C
C Other elongation factors
D 114154936 pcna; proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 114143446 dna2; DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
D 114145946 probable flap endonuclease 1 homolog K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D 114136544 fen1; flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D 114137418 exo1; exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
D 114140428 zranb3; DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 114145805 lig1; DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D 114159729 ATPase family AAA domain-containing protein 5-like K26118 ATAD5; ATPase family AAA domain-containing protein 5
B DNA Replication Termination Factors
C DNA methylation enzymes
D 114159856 dnmt1; DNA (cytosine-5)-methyltransferase 1 isoform X1 K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D 114134496 dnmt3a; DNA (cytosine-5)-methyltransferase 3A isoform X1 K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D 114158467 DNA (cytosine-5)-methyltransferase 3A-like isoform X1 K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D 114141193 uncharacterized protein LOC114141193 K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
D 114140801 DNA (cytosine-5)-methyltransferase 3B-like isoform X1 K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
D 114141147 uncharacterized protein LOC114141147 K17399 DNMT3B; DNA (cytosine-5)-methyltransferase 3B [EC:2.1.1.37]
C Prevention of re-replication factors
D 114155528 gmnn; geminin K10749 GMNN; geminin
D 114149794 ccnb1; G2/mitotic-specific cyclin-B1 K05868 CCNB1; G2/mitotic-specific cyclin-B1
D 114143200 G2/mitotic-specific cyclin-B2-like K21770 CCNB2; G2/mitotic-specific cyclin-B2
D 114161604 G2/mitotic-specific cyclin cdc13-like isoform X1 K21770 CCNB2; G2/mitotic-specific cyclin-B2
D 114156771 ccnb3; G2/mitotic-specific cyclin-B3 K21771 CCNB3; G2/mitotic-specific cyclin-B3
D 114138532 cdk1; cyclin-dependent kinase 1 K02087 CDK1; cyclin-dependent kinase 1 [EC:2.7.11.22 2.7.11.23]
C Telomere proteins
D Shelterin complex
E 114136391 pot1; protection of telomeres protein 1 isoform X1 K11109 POT1; protection of telomeres protein 1
E 114137082 terf1; telomeric repeat-binding factor 1 K11110 TERF1; telomeric repeat-binding factor 1
E 114142649 terf2; telomeric repeat-binding factor 2 K11111 TERF2; telomeric repeat-binding factor 2
E 114156805 uncharacterized protein LOC114156805 isoform X1 K11112 TINF2; TERF1-interacting nuclear factor 2
E 114135361 terf2ip; telomeric repeat-binding factor 2-interacting protein 1 K11113 TERF2IP; telomeric repeat-binding factor 2-interacting protein 1
E 114136070 uncharacterized protein LOC114136070 K11114 ACD; adrenocortical dysplasia protein
D TERB1-TERB2-MAJIN complex
E 114133952 terb1; telomere repeats-binding bouquet formation protein 1 isoform X1 K25749 TERB1; telomere repeats-binding bouquet formation protein 1
E 114142889 terb2; telomere repeats-binding bouquet formation protein 2 K25750 TERB2; telomere repeats-binding bouquet formation protein 2
E 114157978 majin; membrane-anchored junction protein K25751 MAJIN; membrane-anchored junction protein
D CST complex (animals)
E 114140513 ctc1; CST complex subunit CTC1 K23311 CTC1; CST complex subunit CTC1
E 114143918 stn1; CST complex subunit STN1 K23312 STN1; CST complex subunit STN1
E 114144968 ten1; CST complex subunit TEN1 K23313 TEN1; CST complex subunit TEN1
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D 114153156 smg6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
D 114141773 smg5; protein SMG5 K11125 SMG5; protein SMG5
D 114156360 tert; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D 114155381 telomerase reverse transcriptase-like K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D 114146690 tep1; telomerase protein component 1 isoform X1 K11127 TEP1; telomerase protein component 1
D Dyskerin complex
E 114139140 gar1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
E 114153336 nhp2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
E 114157237 nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
E 114155892 dkc1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
C Telomerase complex (fungi)
D 114156360 tert; telomerase reverse transcriptase K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D 114155381 telomerase reverse transcriptase-like K11126 TERT; telomerase reverse transcriptase [EC:2.7.7.49]
D Sm core complex
E 114135291 small nuclear ribonucleoprotein-associated protein B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 114156264 snrpd1; small nuclear ribonucleoprotein Sm D1 K11087 SNRPD1; small nuclear ribonucleoprotein D1
E 114161306 snrpd2; small nuclear ribonucleoprotein Sm D2 K11096 SNRPD2; small nuclear ribonucleoprotein D2
E 114150175 snrpd3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 114135247 snrpe; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 114141338 snrpf; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 114147030 snrpg; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
C ELG1-RFC complex
D 114150715 rfc4; replication factor C subunit 4 K10755 RFC2_4; replication factor C subunit 2/4
D 114140816 rfc2; replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 114153693 rfc3; replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 114154849 rfc5; replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
C MRN complex
D 114161901 mre11; double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
D 114153478 rad50; DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D 114142137 nbn; nibrin K10867 NBN; nibrin
C Other termination factors
D 114161922 atm; serine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 114161024 blm; Bloom syndrome protein isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D 114137103 prkdc; DNA-dependent protein kinase catalytic subunit isoform X1 K06642 PRKDC; DNA-dependent protein kinase catalytic subunit [EC:2.7.11.1]
D 114154710 ercc4; DNA repair endonuclease XPF isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
D 114158908 parp1; poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
D 114147643 parp4; protein mono-ADP-ribosyltransferase PARP4 isoform X1 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 114147036 parp2; poly [ADP-ribose] polymerase 2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 114135817 parp3; protein mono-ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
D 114149257 poly [ADP-ribose] polymerase tankyrase-1-like K10799 TNKS; tankyrase [EC:2.4.2.30]
D 114154375 poly [ADP-ribose] polymerase tankyrase-1 isoform X1 K10799 TNKS; tankyrase [EC:2.4.2.30]
D 114158653 pinx1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1
D 114141869 rtel1; regulator of telomere elongation helicase 1 K11136 RTEL1; regulator of telomere elongation helicase 1 [EC:5.6.2.3]
D 114133764 telo2; telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 114148259 trir; telomerase RNA component interacting RNase K01149 TRIR; telomerase RNA component interacting RNase [EC:3.1.13.-]
D 114148408 rif1; telomere-associated protein RIF1 isoform X1 K11138 RIF1; telomere-associated protein RIF1
D 114147026 pif1; ATP-dependent DNA helicase PIF1 K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D 114153212 pura; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
D 114139378 transcriptional activator protein Pur-alpha-like K21772 PURA; transcriptional activator protein Pur-alpha
D 114149120 purine-rich element-binding protein gamma-like K21800 PURG; purine-rich element-binding protein gamma
D 114157764 wrap53; telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
D 114144106 sde2; replication stress response regulator SDE2 isoform X1 K25059 SDE2; replication stress response regulator SDE2
D 114135301 rtf2; protein RTF2 homolog isoform X1 K25186 RTF2; replication termination factor 2
B DNA Topoisomerases
C 114148714 DNA topoisomerase 1-like K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 114135803 DNA topoisomerase 1-like K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 114153428 DNA topoisomerase I, mitochondrial-like K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
C 114156536 top2b; DNA topoisomerase 2-beta isoform X1 K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C 114151371 top2a; DNA topoisomerase 2-alpha K03164 TOP2; DNA topoisomerase II [EC:5.6.2.2]
C 114154862 top3b; DNA topoisomerase 3-beta-1 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
C 114160058 top3a; DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D 114160943 ssbp1; single-stranded DNA-binding protein, mitochondrial K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
D RNase H
E 114158974 rnaseh1; ribonuclease H1 K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Other elongation factors
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E 114158974 rnaseh1; ribonuclease H1 K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
E 114143446 dna2; DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 K10742 DNA2; DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
E 114145946 probable flap endonuclease 1 homolog K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 114136544 fen1; flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 114145805 lig1; DNA ligase 1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DNA Replication Termination Factors
C Terminus site-binding protein
C DNA methylation enzymes
C Prevention of re-replication factors
B DNA Topoisomerases
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022