| |
KO |
 Eukaryotic type
|
SSBR (single strand breaks repair)
|
 Direct repair
|
BER (base exicision repair)
|
DNA glycosylases
|
AP endonucleases
|
Long Patch-BER factors
|
DNA polymerase delta complex
|
DNA polymerase epsilon complex
|
 TRV_03815 hypothetical protein
|
K04802 PCNA; proliferating cell nuclear antigen |
TRV_07676 hypothetical protein
|
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] |
TRV_05913 hypothetical protein
|
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] |
Short Patch-BER factors
|
Other BER factors
|
NER (nucleotide excision repair)
|
GGR (global genome repair) factors
|
TCR (transcription coupled repair) factors
|
TFIIH complex
|
RPA (replication factor A)
|
Other NER factors
|
TRV_07906 hypothetical protein
TRV_05441 hypothetical protein
TRV_05859 hypothetical protein
TRV_01672 hypothetical protein
TRV_05913 hypothetical protein
TRV_04438 hypothetical protein
TRV_04113 hypothetical protein
TRV_02272 RNA polymerase II transcription factor SIII (Elongin) subunit A, putative
|
K10847 XPA; DNA-repair protein complementing XP-A cells
K10849 ERCC1; DNA excision repair protein ERCC-1
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K10846 ERCC5; DNA excision repair protein ERCC-5
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K15075 MET18; DNA repair/transcription protein MET18/MMS19
K03869 CUL3; cullin 3
K15077 ELA1; elongin-A
|
MMR (mismatch excision repair)
|
Mismatch and loop recognition factors
|
MutL homologs
|
DNA polymerase delta complex
|
RPA (replication factor A)
|
RFC (replication factor C)
|
Other MMR factors
|
TRV_03815 hypothetical protein
TRV_05186 exonuclease, putative
TRV_05913 hypothetical protein
TRV_06139 hypothetical protein
|
K04802 PCNA; proliferating cell nuclear antigen
K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K24755 WDR76; WD repeat-containing protein 76
|
DSBR (double strand breaks repair)
|
TLS (translesion DNA synthesis) factors
|
Check point factors
|
Other factors with a suspected DNA repair function
|
|
|
Prokaryotic type
|
DNA Repair and Recombination Proteins - Trichophyton verrucosum