SSDB Best Search Result

Entry:hsm:HSM_0796 (147 a.a.)
Name:DNA-directed DNA polymerase
KO:K02339 DNA polymerase III subunit chi

Search Result : 119 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
apl:APL_1505 DNA polymerase III subunit chi             K02339     145      699     0.688      144     
pmu:PM0822 HolC                                         K02339     142      687     0.667      147     
hdu:HD_0667 DNA polymerase III chi subunit              K02339     153      660     0.646      144     
hin:HI_1397 DNA polymerase III, chi subunit (holC)      K02339     144      660     0.667      147     
plu:plu4482 DNA polymerase III, chi subunit             K02339     149      542     0.567      141     
pmr:PMI3463 DNA polymerase III, chi subunit             K02339     149      535     0.553      141     
ddd:Dda3937_01297 DNA polymerase III, chi subunit       K02339     149      532     0.538      143     
pam:PANA_0496 HolC                                      K02339     152      528     0.524      143     
eca:ECA0403 DNA polymerase III, chi subunit             K02339     149      528     0.524      143     
enc:ECL_04595 DNA polymerase III subunit chi            K02339     147      524     0.531      143     
kpn:KPN_04664 DNA polymerase III subunit chi            K02339     147      521     0.538      143     
smar:SM39_4832 DNA polymerase III, chi subunit          K02339     149      519     0.517      143     
sty:STY4815 DNA polymerase III, chi subunit             K02339     160      512     0.524      143     
stm:STM4476 DNA polymerase III, chi subunit             K02339     160      512     0.524      143     
yen:YE0499 DNA polymerase III, chi subunit              K02339     149      508     0.503      143     
yps:YPTB0530 DNA polymerase III, chi subunit            K02339     149      508     0.503      143     
ypk:y0745 DNA polymerase III, chi subunit               K02339     158      508     0.503      143     
ype:YPO3442 DNA polymerase III, chi subunit             K02339     149      508     0.503      143     
eco:b4259 DNA polymerase III subunit chi                K02339     147      504     0.510      143     
eam:EAMY_0375 DNA polymerase III, chi subunit           K02339     151      496     0.510      143     
sfl:SF4230 DNA polymerase III subunit chi               K02339     147      496     0.503      143     
ecs:ECs_5236 DNA polymerase III chi subunit HolC        K02339     147      494     0.503      143     
cro:ROD_33251 DNA polymerase III, chi subunit           K02339     147      491     0.503      143     
esa:ESA_03446 hypothetical protein                      K02339     153      490     0.490      143     
vfi:VF_0412 DNA polymerase III, chi subunit             K02339     147      389     0.424      144     
son:SO_3423 DNA polymerase III chi subunit HolC         K02339     154      373     0.390      146     
vpa:VP2645 DNA polymerase III, chi subunit              K02339     149      345     0.399      143     
cps:CPS_0739 DNA polymerase III, chi subunit            K02339     157      319     0.365      148     
vvu:VV1_1475 DNA polymerase III chi subunit             K02339     149      313     0.386      145     
vch:VC_2502 DNA polymerase III, chi subunit             K02339     149      289     0.386      145     
lpn:lpg2632 DNA polymerase III, chi subunit             K02339     144      271     0.319      144     
ppu:PP_0979 DNA polymerase III subunit chi              K02339     142      251     0.295      146     
pae:PA3832 DNA polymerase III subunit chi               K02339     142      250     0.288      146     
abo:ABO_0494 DNA polymerase III, chi subunit            K02339     148      248     0.295      146     
pst:PSPTO_1270 DNA polymerase III, chi subunit          K02339     142      244     0.306      147     
psb:Psyr_1090 DNA polymerase III, chi subunit           K02339     142      243     0.301      146     
avn:Avin_11640 DNA polymerase III chi subunit, HolC     K02339     142      239     0.295      146     
pfl:PFL_1065 DNA polymerase III, chi subunit            K02339     142      239     0.288      146     
cja:CJA_1447 DNA polymerase III, chi subunit            K02339     139      231     0.272      147     
afr:AFE_2203 DNA polymerase III, chi subunit            K02339     141      227     0.320      122     
alv:Alvin_1215 DNA polymerase III chi subunit HolC      K02339     143      225     0.333      117     
mca:MCA2098 putative DNA polymerase III, chi subunit    K02339     152      219     0.288      139     
xfa:XF_0136 DNA polymerase III holoenzyme chi subunit   K02339     141      208     0.268      149     
sml:Smlt0674 putative DNA polymerase                    K02339     141      207     0.279      147     
csa:Csal_2921 DNA polymerase III chi subunit, HolC      K02339     150      205     0.233      146     
eba:ebA7175 DNA polymerase III, chi subunit             K02339     145      201     0.299      144     
hel:HELO_1355 DNA polymerase 3 chi subunit              K02339     151      193     0.238      151     
xom:XOO0758 DNA polymerase III holoenzyme chi subunit   K02339     141      192     0.272      147     
xac:XAC3558 DNA polymerase III holoenzyme chi subunit   K02339     141      191     0.272      147     
reu:Reut_A2682 DNA polymerase III chi subunit, HolC     K02339     144      185     0.298      121     
xcc:XCC0648 DNA polymerase III holoenzyme chi subunit   K02339     141      185     0.268      149     
bma:BMA0673 DNA polymerase III, chi subunit, putative   K02339     138      184     0.314      118     
bps:BPSL0966 putative DNA polymerase III chi subunit    K02339     138      179     0.293      116     
brh:RBRH_03149 DNA polymerase III, chi subunit (EC 2.7. K02339     138      178     0.283      120     
bxe:Bxe_A3637 Putative DNA polymerase III chi subunit   K02339     138      178     0.291      117     
cvi:CV_2913 DNA polymerase III, chi subunit             K02339     141      175     0.256      125     
neu:NE0442 putative DNA polymerase III (chi subunit) pr K02339     129      175     0.293      116     
rso:RSc2414 probable dna polymerase III (chi subunit) p K02339     142      175     0.288      125     
reh:H16_A2989 DNA polymerase III chi subunit            K02339     144      169     0.298      121     
cdn:BN940_05496 DNA polymerase III chi subunit          K02339     153      147     0.231      121     
bpe:BP2422 conserved hypothetical protein               K02339     151      141     0.211      128     
acb:A1S_0226 DNA polymerase III chi subunit             K02339     135      133     0.267      120     
aci:ACIAD0252 DNA polymerase III, chi subunit           K02339     135      132     0.245      143     
ngo:NGO_1226 DNA polymerase III subunit chi             K02339     146      131     0.263      137     
nme:NMB1568 putative DNA polymerase holoenzyme chi subu K02339     146      127     0.242      128     
rpa:TX73_015825 DNA polymerase III subunit chi          K02339     150      126     0.252      143     
sme:SMc00586 Putative DNA polymerase III chi subunit    K02339     149      120     0.273      128     
ptex:113451358 vomeronasal type-2 receptor 26-like      K04613     712      118     0.267      105     
sly:104647191 serine carboxypeptidase-like 10 isoform X K16296     459      118     0.309      97      
mgr:MGG_07468 ubiquitin C-terminal hydrolase            K11838    1175      117     0.207      82      
gox:GOX0292 DNA polymerase III, chi subunit             K02339     147      116     0.250      108     
zmo:ZMO1308 DNA polymerase III chi subunit HolC         K02339     148      116     0.252      139     
rcp:RCAP_rcc02696 DNA polymerase III, chi subunit       K02339     150      113     0.236      140     
mea:Mex_1p5105 conserved hypothetical protein           K02339     150      112     0.222      126     
ccr:CC_1693 DNA polymerase III, chi subunit, putative   K02339     153      112     0.240      104     
atu:Atu1111 DNA polymerase III subunit chi              K02339     149      111     0.246      130     
bhe:BH05460 hypothetical protein                        K02339     154      109     0.242      120     
sur:STAUR_6406 D-alanine--D-alanine ligase              K01921     326      107     0.286      98      
spo:2541903 alpha,alpha-trehalose-phosphate synthase    K22337     891      107     0.289      114     
nta:107778956 uncharacterized protein LOC107778956                 441      106     0.283      99      
vg:54989754 Yersinia phage YpP-Y; terminase large subun K26951     586      105     0.231      117     
ava:Ava_0215 Protein of unknown function DUF820                    259      105     0.245      147     
ncr:NCU09124 hypothetical protein                                  410      104     0.236      127     
rsp:RSP_2898 DNA polymerase III, chi subunit            K02339     152      103     0.272      125     
sco:SCP1.264 hypothetical protein                                  460      103     0.287      101     
fca:101081596 serine/threonine-protein phosphatase CPPE K21814     313      101     0.244      127     
nar:Saro_0892 DNA polymerase III chi subunit, HolC      K02339     143      101     0.297      64      
cne:CNC04230 conserved hypothetical protein             K01673     221      100     0.312      80      
mlo:mlr7869 unknown protein                             K02339     149      100     0.242      132     
pde:Pden_0904 DNA polymerase III chi subunit, HolC      K02339     149       99     0.278      72      
osa:107278282 uncharacterized protein                              537       99     0.258      97      
rru:Rru_A0214 MutT/nudix family protein                            292       99     0.294      136     
ftu:FTT_0298 DNA polymerase III (CHI subunit) protein   K02339     146       99     0.262      149     
bja:blr4109 ORF_ID:blr4109; hypothetical protein        K02339     150       99     0.241      112     
rfq:117012337 synaptobrevin homolog YKT6                K08516     198       98     0.252      107     
ocu:100341165 serine/threonine-protein phosphatase CPPE K21814     313       98     0.244      123     
fgr:FGSG_13439 hypothetical protein                     K11662     358       98     0.328      67      
sil:SPO2452 DNA polymerase III, chi subunit, putative   K02339     154       98     0.241      137     
mtr:11412153 uncharacterized protein LOC11412153                   173       97     0.200      95      
azc:AZC_0540 DNA polymerase III chi subunit             K02339     149       97     0.235      132     
bta:507409 synaptobrevin homolog YKT6                   K08516     198       97     0.252      107     
pmur:114923340 Fanconi anemia group G protein           K10894     381       96     0.300      80      
sjp:SJA_C1-25510 DNA polymerase III chi subunit         K02339     149       96     0.244      78      
ssc:100513964 synaptobrevin homolog YKT6                K08516     198       96     0.243      107     
ssy:SLG_14930 conserved hypothetical protein            K02339     145       95     0.216      139     
xau:Xaut_1459 DNA polymerase III chi subunit HolC       K02339     153       95     0.261      138     
elm:ELI_1120 hypothetical protein                                  191       94     0.292      89      
mar:MAE_51770 unknown protein                                      195       94     0.286      70      
mmu:27379 protein TCL1B1                                K16836     116       94     0.273      66      
ame:410563 uncharacterized protein LOC410563 isoform X1            177       92     0.231      91      
yli:2906639 Hypothetical protein                                   201       92     0.230      126     
spn:SP_1259 conserved hypothetical protein                         111       89     0.282      103     
sno:Snov_1098 DNA polymerase III chi subunit HolC       K02339     148       88     0.250      112     
rcu:112536872 protein SENESCENCE-ASSOCIATED GENE 21, mi             91       88     0.293      75      
ctt:CtCNB1_2859 DNA polymerase III chi subunit, HolC    K02339      77       87     0.259      54      
ola:105358827 coiled-coil-helix-coiled-coil-helix domai            115       86     0.289      97      
ape:APE_0883c hypothetical protein                                  76       83     0.321      53      
dre:751762 mapk-regulated corepressor-interacting prote             97       80     0.394      33      
fvr:FVEG_11898 hypothetical protein                                 39       67     0.381      21      

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