SSDB Motif Search Result


Organism : Cellulosimicrobium sp. TH-20
Gene : B8281_10560
Definition : K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ATP-dependent DNA ligase
Motif idFromToDefinitionE valueScore
pf:LigD_Prim-Pol35288 1.3e-89-
pf:DNA_primase_S142262DNA primase small subunit 0.0083-
pf:Oxidored_nitro159222Nitrogenase component 1 type Oxidoreductase 0.34-
pf:LigD_N367459DNA polymerase Ligase (LigD) 1.5e-35-
pf:DNA_ligase_A_M562756ATP dependent DNA ligase domain 4e-36-
pf:RNA_ligase579754RNA ligase 5.8e-05-
pf:DNA_ligase_OB_2770823DNA ligase OB-like domain 0.12-
pf:DNA_ligase_A_C776879ATP dependent DNA ligase C terminal region 2.4e-27-

cet:B8281_10560 pf:LigD_Prim-Pol pf:DNA_primase_S pf:Oxidored_nitro pf:LigD_N pf:DNA_ligase_A_M pf:RNA_ligase pf:DNA_ligase_OB_2 pf:DNA_ligase_A_C

[ GENES | KEGG2 | KEGG | GenomeNet ]