| Motif id | From | To | Definition | E value | Score |
| pf:ABC_membrane | 51 | 336 | ABC transporter transmembrane region
| 6.4e-28 | - |
| pf:DUF4446 | 211 | 285 | Protein of unknown function (DUF4446)
| 0.26 | - |
| pf:DUF815 | 385 | 464 | Protein of unknown function (DUF815)
| 0.0099 | - |
| pf:T2SSE | 390 | 451 | Type II/IV secretion system protein
| 0.06 | - |
| pf:RsgA_GTPase | 404 | 441 | | 0.0029 | - |
| pf:ABC_tran | 409 | 558 | ABC transporter
| 4.1e-33 | - |
| pf:AAA_23 | 412 | 438 | AAA domain
| 0.23 | - |
| pf:AAA_7 | 412 | 447 | P-loop containing dynein motor region D3
| 0.13 | - |
| pf:AAA_29 | 416 | 436 | P-loop containing region of AAA domain
| 0.0022 | - |
| pf:AAA_16 | 420 | 477 | AAA ATPase domain
| 0.00057 | - |
| pf:Septin | 421 | 492 | Septin
| 0.027 | - |
| pf:NACHT | 421 | 440 | NACHT domain
| 0.26 | - |
| pf:SMC_N | 422 | 599 | RecF/RecN/SMC N terminal domain
| 0.0037 | - |
| pf:MMR_HSR1 | 422 | 466 | 50S ribosome-binding GTPase
| 0.0037 | - |
| pf:DUF87 | 422 | 450 | Domain of unknown function DUF87
| 0.0063 | - |
| pf:Zeta_toxin | 422 | 460 | Zeta toxin
| 0.017 | - |
| pf:AAA_22 | 422 | 444 | AAA domain
| 0.11 | - |
| pf:AAA_10 | 422 | 455 | AAA-like domain
| 0.064 | - |
| pf:AAA_18 | 422 | 441 | AAA domain
| 0.29 | - |
| pf:MobB | 422 | 445 | Molybdopterin guanine dinucleotide synthesis protein B
| 0.25 | - |
| pf:AAA_21 | 423 | 445 | AAA domain, putative AbiEii toxin, Type IV TA system
| 0.022 | - |
| pf:AAA_33 | 423 | 442 | AAA domain
| 0.19 | - |