SSDB Motif Search Result
Organism :
Pseudomonas simiae PICF7
Gene :
PFLUOLIPICF724270
Definition :
K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | (GenBank) ligD; ATP-dependent DNA ligase
Motif id
From
To
Definition
E value
Score
pf:LigD_N
39
144
DNA polymerase Ligase (LigD)
6.1e-44
-
pf:DNA_ligase_A_M
208
388
ATP dependent DNA ligase domain
6.5e-24
-
pf:RNA_ligase
221
372
RNA ligase
0.04
-
pf:DNA_ligase_A_C
407
501
ATP dependent DNA ligase C terminal region
1.2e-27
-
pf:LigD_Prim-Pol
544
796
3.7e-90
-
pf:DNA_primase_S
646
766
DNA primase small subunit
3.2e-06
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]