SSDB Motif Search Result
Organism :
Ectopseudomonas mendocina NK-01
Gene :
MDS_1012
Definition :
K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] | (GenBank) D-alanine--D-alanine ligase
Motif id
From
To
Definition
E value
Score
pf:Dala_Dala_lig_N
14
52
D-ala D-ala ligase N-terminus
3.9e-08
-
pf:Dala_Dala_lig_N
62
96
D-ala D-ala ligase N-terminus
2.4e-11
-
pf:RimK
104
187
RimK-like ATP-grasp domain
0.44
-
pf:ATP-grasp_3
105
275
ATP-grasp domain
4.9e-05
-
pf:ATP-grasp_5
105
150
ATP-grasp domain
0.0087
-
pf:CPSase_L_D2
106
277
Carbamoyl-phosphate synthase L chain, ATP binding domain
2.8e-08
-
pf:GARS_A
107
196
Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
0.0033
-
pf:Dala_Dala_lig_C
114
305
D-ala D-ala ligase C-terminus
1.5e-57
-
pf:ATP-grasp
114
187
ATP-grasp domain
7.8e-08
-
pf:ATP-grasp_4
141
277
ATP-grasp domain
4.9e-07
-
pf:ATPgrasp_YheCD
258
283
YheC/D like ATP-grasp
0.068
-
pf:TTL
258
283
Tubulin-tyrosine ligase family
0.3
-
[
GENES
|
KEGG2
|
KEGG
|
GenomeNet
]