Austrofundulus limnaeus (annual killifish): 106517345
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Entry
106517345 CDS
T06063
Symbol
rara
Name
(RefSeq) retinoic acid receptor alpha
KO
K08527
retinoic acid receptor alpha
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517345 (rara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alim03310
]
106517345 (rara)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106517345 (rara)
Nuclear receptors [BR:
alim03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
106517345 (rara)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106517345
NCBI-ProteinID:
XP_013863573
UniProt:
A0A2I4B762
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Position
Unknown
AA seq
455 aa
AA seq
DB search
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQETFPSLCQLGKYTTSNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDVLQEPLLEALK
IYVRRRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGSRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgttgtgggrctgaatcccagcccgaacccgtttctaatg
atggattattacaaccagagccgagggtgcttgatcccagagaaaggactggtgcccggt
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggatccaatcactca
atagaaacccagagtaccagctcagaggagatagtgccaagcccaccctcgcctcccccg
ccgccccgcgtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgaaggctgcaagggattcttccggagaagcatccagaagaacatg
gtgtacacatgtcatcgggagaaaaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtactgtcggttacagaagtgcctggaagtcgggatgtctaaagagtccgtgaggaac
gaccggaacaaaaagaagaaggatgagaagaagcaggagtgcacagagagctacgtgctg
agtccggacacagagcagatgattgacagggttcgcaaggcgcaccaggagaccttcccc
tccctctgccagctgggcaaatacactacgtctaacagctcagaaaggcgcgtgtccttg
gacgttgacctgtgggataagttcagcgagctgtccaccaagtgcatcataaagacggtg
gagtttgcgaaacagctgccgggcttcacgacgctcaccatcgctgaccagatcactctg
ctcaaagccgcctgtctggatatcctgatactgcggatctgtacgcgctacacaccagag
caggacaccatgactttctcagatggactcacgctaaacagaacccagatgcacaacgct
ggcttcggacccctcacagacctggtttttgcctttgccaaccagctccttcctctggag
atggatgacgcagagacggggctgcttagygccatctgtttgctgtgtggagatcgacag
gacttggaagaagcggacaaggtggacgtcctgcaggagcctcttctggaggcgctgaag
atttacgtaagaaggcggcggcctcacaaacctcatatgtttcccaagatgctgatgaag
ataacggacctgaggagcatcagtgcgaaaggagctgagcgcgtcatcacgctgaagatg
gagatccccggctccatgccacccctcatccaggagatgctggagaactcagagggtcta
gaaagcggggccgcaggcagcaggcctagcggcgcccccccggggagctgcagtcccagt
ctgtcccccagctcggcccaaagcagtcccgccacacaatcgccgtag
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