Austrofundulus limnaeus (annual killifish): 106524096
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Entry
106524096 CDS
T06063
Symbol
pdgfra
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04010
MAPK signaling pathway
alim04020
Calcium signaling pathway
alim04144
Endocytosis
alim04510
Focal adhesion
alim04540
Gap junction
alim04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106524096 (pdgfra)
04020 Calcium signaling pathway
106524096 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106524096 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106524096 (pdgfra)
04540 Gap junction
106524096 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106524096 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
alim01001
]
106524096 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
alim04090
]
106524096 (pdgfra)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
106524096 (pdgfra)
Protein kinases [BR:
alim01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
106524096 (pdgfra)
CD molecules [BR:
alim04090
]
Proteins
106524096 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
C2-set_2
Izumo-Ig
Kinase-like
Motif
Other DBs
NCBI-GeneID:
106524096
NCBI-ProteinID:
XP_013873208
UniProt:
A0A2I4BZN3
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MYANKEAEQHHGGMLDDVAFIYIFVQDPDVLFVPETPENLIVPYNTFRVIVPCRVSHPTL
PVVLRSMSSGEKISDFYVDKTGFIERISPGQYQCETTVKGRTFTSAIYTVKDEEPEELED
FEVEVKASEETVRAGQPLNISCITPAGADYFQYWLHPKTQAPNALQTKQTSPDWVIYTLS
IPQASSQDSGTYQCSITHAASGKTRVSSVAVTVFEENSFLTLDHSGILTTEFVSIFEATE
FTILINAYPVPKVSWLKDGKELSENYYIFTKTSHTEGNRYESVLMFRHPLEKDNGNYTIT
VVCGSHRTQFSFSIKVRVSAGVMIPPSSAPVLLPDVDEMVVPLHTSFSLTCRGVARLGWD
MPFDMPEQTQEDSSGLFVTTITVDSATVTHTGYYTCFYSANSTGDTEESSIYIYVPDPNT
PFVPSLGHYLNHVLTDXEEMEIPCRVSNPQAHVTLVNVDTQQPVPSVYDSKRGALGIFTA
GTYVCKAVIQGEEHFSSEYIVHGVIGALNVELSAKKSTLLVGDTITVNCLARGSDILEDH
WKYPGKLVNRGSKTVRENKRDQEILYTLTIPQATTKDSGTYSCSITDIISNESRTKQLAI
QVFASKFVSIQPEFGDYESTELDDVREFRAKIDSFPDAHVTWLKDGVPLGDVTAEISTSL
QQISDISYMSILTLIRAKKEDSGNYTIHVQNGNQSRDVSFILEVKEPAVIVDLMDLHHGS
TSGQSVVCITRGQPTPVVEWFICSNIKHCANDSSSWLPLPINSTEITTESHFDDESNLES
QVMFGHLKSTLAVRCLARNEMAAVSREIKLVSNGPHPELTVAAAVLVLLVIVIISLIVLV
VIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEFPRDRLVLGRILGSGAFGK
VVEGTTYGLSRSQPVMQVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK
SGPIYIITEYCFYGDLVNYLHKNRENFHSLSPEKSKKDLDIFGINPADESSRSYVILSFE
RKGDYMDMKQADNTQYVPMLEMCSSSKYSDIRRSNYDHPPSQKDSNESEIDTLLSDDMNE
GLTTVDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNN
YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNK
IKSGYRMSKPEHAPPDVYEMMMKCWNSEPEKRPSFLGLSETVESLLPSSYKRHYERVNHD
FLKSDHPAVIRVGVETDADYVDIPYKNQAKLKDRESSFDEQRLSSDSGYIIPLPDLEPIS
DEDYGKRNRHSSQTSEESAIETGSSSSTYXKREGETLEDITLLDEMCLDCSDLAEDSFL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaaacaaggaggctgagcagcatcacggtggaatgctcgatgatgtggctttt
atttacatctttgtccaagatcctgatgtcctgtttgtcccagagacaccagaaaacctc
atcgttccttacaacacgttccgagtgattgtcccgtgtcgggtgtcccacccaacgctt
cctgtcgtcctgaggagcatgtccagcggggagaagatcagtgacttttatgttgacaag
acaggctttattgaaaggatctctcctgggcagtaccagtgtgagaccactgtgaagggc
cggaccttcaccagtgccatctacactgtaaaagatgaggaacctgaggagctggaggat
tttgaggtggaagttaaagccagtgaagagacggtgagggccgggcagcctctcaacatc
tcctgcatcaccccagctggagccgattactttcagtactggcttcatccaaaaacacag
gctccaaatgcgcttcagaccaagcagacttctcctgactgggtcatttacactctcagt
atcccacaagccagctctcaggacagcggcacctaccagtgctccatcacacacgcagcc
agtggaaaaacccgagtcagcagcgtggctgtaactgtgtttgaggagaattcattcctg
accctggaccacagtgggattcttacaactgagtttgttagcattttcgaggcgacagaa
tttaccattctcatcaacgcttaccccgtccccaaagtgtcatggctgaaagatggcaaa
gaactgtcagagaactattacatcttcaccaaaacaagccacactgaaggcaatcggtat
gaaagcgttctgatgttccgccatcctctggagaaagacaatggaaattacaccattaca
gtcgtgtgtggctctcacagaacccagttctctttttccattaaagtgagagtttctgct
ggagtgatgatccctccttcctcggcccccgtgttgctgccggatgtggatgagatggtg
gtgcctcttcacacgtcgttcagcttgacgtgtcgaggagtggctcggctgggatgggat
atgccatttgatatgcctgagcaaactcaagaggatagcagcggtctgtttgtcaccacc
atcaccgtcgacagtgcaacagtaacgcacactggctactatacatgcttctacagcgca
aacagcacaggcgacacagaggaaagcagcatctacatctatgtaccagatcccaatact
ccttttgtgccatcactggggcattatctaaaccatgtcctgactgactargaggagatg
gagataccatgtagggtgtctaacccccaagctcacgtgacgctcgtgaatgttgacaca
cagcagcctgtgccaagtgtttacgacagtaaaagaggtgctttggggatctttaccgca
ggaacatatgtttgtaaggctgtcatacaaggagaagagcacttcagcagtgaatacatc
gtacatggtgtgataggtgccttgaatgttgagctgtcagccaaaaagtccacactactg
gtgggagacactattactgtcaactgtctagctcgaggatctgacatattggaggaccac
tggaaataccctggaaagctggtcaaccgtggcagcaaaactgtccgtgaaaataagaga
gaccaagagatcctgtataccctaacaattcctcaagccacaaccaaagacagtggaacc
tactcctgttccattacggacattatttctaatgaaagtcggacaaagcaacttgccatc
caagtgtttgcgagtaaatttgtgtccatccagccggagttcggggattatgaatctact
gagctggatgatgtccgggagttcagagcaaagatcgactcctttcccgatgctcatgtc
acttggctcaaagatggcgttcctctcggtgatgtaactgctgagatctccaccagcctg
cagcagatcagtgacatcagctacatgagcattctcacattaattcgtgccaagaaggag
gacagtggaaactacaccattcatgtgcagaatggaaaccagagtcgtgatgtcagcttc
atcctggaggttaaagagcctgcagtcattgtagatttaatggatcttcaccacggttca
acctcaggccagtctgtggtgtgcatcaccagggggcagcccactcctgtggtggagtgg
tttatctgcagtaacatcaaacactgtgccaatgattcgtcttcctggctgccccttccg
atcaactccacagagatcaccacggagtcgcactttgatgacgagagcaacctggagagc
caggtcatgtttggtcatctgaaaagcacgctggcggtacgttgccttgccaggaatgaa
atggctgccgttagcagggaaatcaagctggtgtccaacggccctcaccctgagctgact
gtagctgctgctgtgctggtgctcctggtcattgtcatcatctcactcattgtcttggtt
gtcatctggaaacagaaaccaagatatgagatccggtggagggtcatagagtctgtaagc
ccagatggccatgagtacatctatgtggatcccatgcaacttccgtatgactccagatgg
gagtttccccgggacagacttgtgcttggtcgtatcctgggctctggagcttttgggaaa
gtggtggagggcaccacttatggactcagccgctctcagcctgttatgcaggtggcagtg
aaaatgttgaaacccacggctcggtccagtgagaaacaagccctgatgtctgaactcaag
atcatgactcatctcggaccccatctcaacatcgttaacctcctgggagcgtgcaccaag
tcaggccctatctacattatcaccgagtactgcttctacggagacctggtcaactatctg
cacaagaacagggagaacttccacagcctgagcccagagaaaagcaaaaaggatctggat
atctttggtatcaaccctgcagatgagagcagcaggagctacgtgatcctgtcctttgag
aggaaaggagactacatggatatgaagcaggcggacaacactcagtatgtccccatgctg
gagatgtgcagctcctccaagtattctgacatcaggaggtcgaactacgaccaccctccc
tcacagaaagactccaacgagtccgagatcgacaccctgctgtcagacgacatgaacgaa
ggcctcacaaccgtcgacctgctgagctttacctatcaggtggccagaggaatggagttt
cttgcctccaaaaattgtgtgcaccgcgaccttgcagccaggaatgttcttctttctcag
ggcaaaattgttaaaatctgtgactttggactggccagagacatcatgcatgataacaac
tatgtctccaaaggaagcacatttttgccagtaaagtggatggcaccagaaagcattttc
gacaacctctacacgactctcagtgatgtttggtcttatggtatcctcctctgggaaatt
ttttccttaggtggtacaccgtatccagggatggtggttgactccagcttctacaacaag
atcaagagtggatacaggatgtccaaaccagagcacgcaccacctgatgtgtatgagatg
atgatgaagtgctggaacagtgagccagagaagaggccttccttcttgggtctgagtgaa
actgtggagtctttgctgccctccagttataagagacattatgagagagtcaaccatgac
ttcctgaaaagtgaccatcccgctgtgattcgagtgggcgtggaaaccgatgcagattat
gttgacatcccatacaagaaccaggcaaagctaaaagaccgggaaagcagctttgatgag
cagcgactgagctctgacagtggctacattatcccacttccagacctcgaaccaatctca
gatgaagactatggaaagcggaacagacacagctctcaaacgtctgaggagagcgccatt
gagacgggctccagcagctccacctatgrtaaacgtgagggggagactttggaggacatc
acactgctggatgagatgtgtctggactgtagtgacctggcggaggacagctttctgtga
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integrated database retrieval system
