Arabidopsis lyrata (lyrate rockcress): 9326816
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Entry
9326816 CDS
T01578
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00600
Sphingolipid metabolism
aly01100
Metabolic pathways
Module
aly_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
9326816
Enzymes [BR:
aly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
9326816
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
9326816
NCBI-ProteinID:
XP_002890754
UniProt:
D7KBV9
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MDSFSYSSMKSMLIQARGSLNSRLSEFEPLVLLLAPLLTLFLAQMIGSVFGVVHDKGLKA
CLVGFLMGFLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNRTEVLPVKGLGVEVLEKME
NEKRNDAIWQGKCSGTVYIGGAESEGHFALINQACSMFAHTNPLHIDVFQSVVRFESEVV
AMTAALLGSKETVSGGKICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHS
AYDKAAQYFNIKLWRVPVDKDFRADVKATRRHINKNTIMIVGSAPGFPHGIIDPIEELGQ
LALSYGICFHVDLCLGGFVLPFARKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTV
LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIM
EASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIH
ICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM
DSQY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggattccttttcgtattcttcgatgaaatccatgttgattcaagctcgtggctcgtta
aactcgcgtttgtctgagtttgagcctctggttctgcttttggctccgcttctcactctg
tttctcgctcaaatgatcggatctgtcttcggcgttgttcatgataaaggtttgaaagcg
tgtcttgtcgggtttcttatgggtttcctcaaaatgattcctggagttcaaaattacata
gacgctgagaagcaaaaggttgttgatcaattacaatctggtagcagctcgaagaaaaag
aaccggactgaagtattgccagttaaaggtctaggagttgaagttctagagaaaatggag
aatgaaaagaggaatgatgctatttggcaaggaaaatgctctggcactgtatacataggt
ggagccgagtctgaaggacattttgcattgataaatcaagcatgttcaatgtttgcgcat
accaatccgttgcatatagacgtattccagagtgtggtgcggtttgagtcagaagtagtc
gcaatgactgctgcattactggggagtaaagaaacggtttcaggaggaaaaatatgcgga
aacatgacatctggaggaacagaaagtatagtgttggctgtgaagtcatctcgtgactat
atgaagtacaagaagggaatcacacggccagaaatgattatacctgaatcgggtcattcg
gcttatgataaggcggcccagtattttaacatcaagttgtggcgagttccagtagacaaa
gacttccgagctgatgtgaaggcaacaaggcggcatattaacaaaaacaccatcatgatt
gttggatcagcaccaggattccctcatggcatcatcgatcctatcgaggagcttggtcaa
ctggctcttagctatggaatatgctttcatgttgacctttgccttggtggttttgtgtta
cctttcgctcgtaaacttgggtaccagatcccaccttttgatttttctgtacaaggagtt
acttcaatttcggtggatgtgcataaatatggtttggctcctaaaggaactagtacagtt
ctctacagaaatcatgagatcagaaagcaccaatttgttgctgtaactgaatggtcagga
ggtctatacgtgtctccaactatagctgggagcaggcctggttctttggttgctggtgct
tgggctgcaatgatgtctctcggcgaagaaggctacctacaaaacacaagcaagataatg
gaagcatcaaagagactagaggaaggagtaagagaaatccatgaactattcgtcattgga
aagccagatatgacaatcgtggcgtttggttctaaagcattggatatctttgaagtaaat
gacatcatgtcttcgaaaggttggcatttgaatgcactacagagacccaacagcattcat
atatgtataactcttcaacacgtccctgtagtcgatgacttccttcgggatttgcgtgaa
gctgtagaaactgtgaaagcaaacccaggaccgatcactggaggcttggctccaatatat
ggagcagcagggaagatgccagaccgaggcatggtgaatgagcttctggttagtttcatg
gatagtcaatattaa
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