Amphiprion ocellaris (clown anemonefish): 111579172
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Entry
111579172 CDS
T06018
Name
(RefSeq) retinoic acid receptor alpha-A isoform X1
KO
K08527
retinoic acid receptor alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111579172
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aoce03310
]
111579172
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111579172
Nuclear receptors [BR:
aoce03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
111579172
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111579172
NCBI-ProteinID:
XP_023142109
Ensembl:
ENSAOCG00000021967
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MMYESVDVVGLNPSPNPFLMMDYYNQSRGCLIPEKGLVPGAPHPYSTSIRNQHWNGSNHS
IETQSTSSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKQECTESYVL
SPDTEQMIDRVRKAHQDTFPSLCQLGKYTTTNSSERRVSLDVDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEEADKVDILQEPLLEALK
IYVRKRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGL
ESGAAGGRPSGAPPGSCSPSLSPSSAQSSPATQSP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatgagagtgtggacgttgtgggactgaaccccagcccgaacccgtttttaatg
atggattactacaaccagagcagaggatgcttgatcccggagaaaggactggtgcccgga
gcgccccatccctacagcacgtccatcaggaaccagcactggaacggctccaatcactcg
atagagacccagagtaccagctcagaggagatagtgccaagcccgccctcacctcccccg
ccaccccgcgtctacaagccctgctttgtgtgccaggacaagtcctcagggtaccactat
ggtgtcagcgcctgtgagggctgcaagggtttctttcggagaagcatccagaagaacatg
gtgtacacttgtcatcgggagaagaactgcatcatcaacaaagtcacccgcaatcgctgc
cagtattgtcggttgcagaagtgcctggaagtggggatgtcaaaggagtctgtgaggaac
gaccggaacaagaagaaaaaggatgagaagaagcaagagtgcacagagagctacgtgctg
agtcctgacacagaacagatgatcgacagggttcgcaaggcacaccaggatactttcccc
tctctctgccagctgggcaaatacactacgaccaacagctcagaacgacgtgtatccttg
gatgtagatctgtgggacaagttcagtgaactttcaaccaagtgcatcataaaaacagtg
gagtttgctaagcagctgcctggcttcacaacgcttaccatcgccgaccagatcactctg
ctcaaagccgcatgtctggatatcctgatactgcggatctgtacacgctacacaccagag
caagacaccatgactttctcagatggactcacgctaaaccgaacccagatgcacaacgct
ggcttcggtcccctcactgacctggtttttgccttcgccaaccagctccttcctctggag
atggacgatgcagagacggggctgctcagcgccatctgtttgctgtgtggagatcgacag
gacttggaagaggcggacaaagtagacatcctgcaggagccccttctggaggcgctgaag
atttatgtaaggaagaggaggccccacaaaccgcatatgttccccaagatgctcatgaag
atcactgatctgagaagcatcagtgctaaaggagctgagcgtgtcatcactctgaagatg
gagatccctggctcaatgccgcctctcatccaggagatgctggagaactcagaaggtctg
gagtctggagcagcaggcggccgacccagtggagctcctccaggcagctgcagccccagt
ctgtcccccagctctgcccaaagcagtccagccacacaatcgccgtag
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