Auxenochlorella protothecoides: F751_3781
Help
Entry
F751_3781 CDS
T04132
Name
(RefSeq) Polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
F751_3781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_3781
Enzymes [BR:
apro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
F751_3781
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
F751_3781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
ABC_tran
AAA_29
MMR_HSR1
AAA_21
RsgA_GTPase
AAA_23
nSTAND3
GTP_EFTU
AAA_22
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
23615172
NCBI-ProteinID:
XP_011397657
UniProt:
A0A087SGB5
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MQSYVNVHDVLEARRQQALTEQRRGPTTVIVGPTDAGKSTLCKILINYAIRCRWTPALVD
LDIGQGSITVPGCIAATSVEAPIDVEEGFPVDAPLVYYAGTVAGGENMALYQHLVERVAD
ALERRAGTDAKVAASGMMVNTMGWIEGDGYSLLRHTIASLAADVVLVVGSDRLHSQLSSD
LATSSPAISVVKLAKSGGVVTRTRELRQEARKVRVEEYFYGPTRSLAPASQTLKLEGVEV
YRVGGGPKAPPSALPIGATSVADPLKLARVTNPQELLYTVLGVSHAPTPDLLLSASVAGF
VYVQDVDLAKGSMSVLAPRPGPLPGSLLLAGNFKVYLD
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctatgtgaacgtccacgatgttctagaggctcgccggcagcaggctctgacc
gagcagcggcgcggacccacgaccgtgatcgttgggcccaccgacgccgggaagagcacg
ctgtgcaagatcctgatcaactatgccatccggtgccgctggactccagcgctggtcgac
ctggacataggtcaaggcagcatcacagtcccaggctgcatcgctgcaacctccgtggag
gcgcccatcgacgtagaggagggcttccccgtggatgccccgctggtctactatgcagga
acggtggccggcggagaaaacatggccctgtatcagcatctcgtggaacgggtggctgat
gccctggagcgaagagctgggacggatgccaaggtcgctgcctccggcatgatggtcaac
accatgggctggatagagggcgatggctacagcctgttgcgacacaccattgcatccctg
gcggccgatgttgtgcttgtggtgggcagcgatcgcctgcactcccagctctcttctgac
ctggccaccagctcgccagccatttcggtagtgaagcttgccaagtcgggcggggtggtg
acgcggacgcgcgagctccgccaggaagcgcgcaaggtccgggtggaggagtacttttac
gggcccacccgctctctggcccccgcgtcccagacgctgaagctggagggggtggaggtg
taccgggtgggcggcggccccaaggccccaccctccgccctgcccatcggcgcgacctcc
gtggccgaccccctgaagctggcgcgggtgaccaacccccaggagctgctgtacacggtg
ctgggggtgagccatgcacccaccccggacctcctcctctccgcctccgtggcggggttt
gtgtatgtccaggatgtggacctggccaagggcagcatgagcgtcctggcaccgcggccg
gggcccctgcccggctcgctgctgctggccgggaacttcaaggtgtacctggactga
DBGET
integrated database retrieval system
