KEGG   Agrobacterium vitis VAT03-9: RvVAT039_05060
Entry
RvVAT039_05060    CDS       T08809                                 
Name
(GenBank) transcriptional regulator ArgP
  KO
K05596  LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
avv  Agrobacterium vitis VAT03-9
Brite
KEGG Orthology (KO) [BR:avv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:avv03000]
    RvVAT039_05060
   03036 Chromosome and associated proteins [BR:avv03036]
    RvVAT039_05060
Transcription factors [BR:avv03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    RvVAT039_05060
Chromosome and associated proteins [BR:avv03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RvVAT039_05060
SSDB
Motif
Pfam: HTH_1 LysR_substrate HTH_50 HTH_30 P22_Cro Cro HTH_20 HTH_AsnC-type MarR_2 HTH_28 Sigma70_r4 HTH_11
Other DBs
NCBI-ProteinID: BCH63290
LinkDB
Position
1:complement(505018..505923)
AA seq 301 aa
MTFDGEQLSTLVAVLRSGSFEKAARQLGVTQSAISQRIKLLEERSGTALIIRGQPCLPTS
AGARLCRHAEEVALLERQVIGDLGLGQAAQVTVRLAVNADSLATWFVPAMAAVEGLLFDL
VLDDQDHSADWLRRGEVRAAVTSLAAPVQGCDCRPLGLLTYRATASPDFAARWFPQGVTA
EALAVAPCLTFNAKDGLQTAWMEQVAGCRLSPPCHWLPSSQAFIDASRLGLGWGMNPAVS
VAALIAEGVLVDLRPDQPLAVPLYWHWSRALGRALDPLTASVLAAARQCLLPMARKLPSM
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgttcgatggtgagcagttatcgacgctggtggctgtgctgcgcagcggcagtttc
gaaaaagcagcccgtcagttgggggtgacgcaatcggcgatctcgcagcgtatcaagctg
ctggaggagcgatccggcacggcgctgatcattcgtgggcaaccctgtttgccgacttcg
gcgggggcgcggctttgccgccatgccgaggaagtggccttgctggagcgccaggtgatc
ggtgatctcggtcttgggcaagctgcccaggtgacggtgcggctggcggtcaatgctgat
agtctcgcgacctggttcgtgccagccatggccgcagtggagggcctgttgttcgatctg
gtgctggatgatcaggaccacagcgccgattggctgcggcgcggtgaggtgcgggcggcg
gtgacctcgcttgccgcgcccgttcagggctgcgattgccgaccgcttggtttgctgacc
taccgcgccacggccagcccggatttcgcggcgcgatggtttccccagggcgtcaccgct
gaggctctggctgtcgccccttgccttaccttcaatgccaaggatggattgcaaaccgcc
tggatggagcaggtggccggatgccgcctgtcacccccttgccattggctgccctccagc
caggcttttatcgacgcgtcgcgtctggggctgggctggggcatgaacccggcggtttcg
gtggcggctttgatcgccgagggcgtgctggtggatctgaggccggatcaaccgcttgcc
gtgccgctttattggcattggagcagggcgctgggccgggcgctcgatccgctaacggca
agcgtccttgccgcagcacgccaatgcttgctgcccatggcgcgtaagcttccatcaatg
cggtaa

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