T number | T08809 |
Org_code | avv |
Name | Agrobacterium vitis VAT03-9 |
Annotation | yes |
Taxonomy | TAX: 373 |
Lineage | Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_013426715.1 Complete Genome) BioProject: 640767 |
Keywords | Plant pathogen |
Comment | Causal agent of crown gall disease in grapevine. Isolated from graft unions of nursery stock of grapevine (Vitis vinifera L. 'Seto Giants') in a field of Okayama Prefecture, Japan.
|
Chromosome | 1; Circular |
Sequence | GB: AP023279 |
Length | 3717176 |
Chromosome | 2; Circular |
Sequence | GB: AP023280 |
Length | 1132123 |
Plasmid | pRvVAT039a; Circular |
Sequence | GB: AP023281 |
Length | 609097 |
Plasmid | pRvVAT039b; Circular |
Sequence | GB: AP023282 |
Length | 371025 |
Plasmid | pRvVAT039c; Circular |
Sequence | GB: AP023284 |
Length | 88753 |
Plasmid | pRvVAT039d; Circular |
Sequence | GB: AP023285 |
Length | 48286 |
Plasmid | pTiRvVAT039; Circular |
Sequence | GB: AP023283 |
Length | 257173 |
Statistics | Number of nucleotides: 6223633 Number of protein genes: 5700 Number of RNA genes: 69
|
Created | 2023 |
Reference | PMID: 33000999 |
Authors | Noutoshi Y, Toyoda A, Ishii T, Saito K, Watanabe M, Kawaguchi A |
Title | Complete Genome Sequence Data of Tumorigenic Rhizobium vitis Strain VAT03-9, a Causal Agent of Grapevine Crown Gall Disease. |
Journal | Mol Plant Microbe Interact 33:1280-1282 (2020) DOI: 10.1094/MPMI-07-20-0180-A |