Agrobacterium vitis VAT03-9: RvVAT039_10570
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Entry
RvVAT039_10570 CDS
T08809
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00500
Starch and sucrose metabolism
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
Module
avv_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
avv_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RvVAT039_10570 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avv04147
]
RvVAT039_10570 (glgB)
Enzymes [BR:
avv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RvVAT039_10570 (glgB)
Exosome [BR:
avv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RvVAT039_10570 (glgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
Alpha-amylase
DUF5696
Motif
Other DBs
NCBI-ProteinID:
BCH63841
LinkDB
All DBs
Position
1:1103712..1105961
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AA seq
749 aa
AA seq
DB search
MKKTTRQTQVSAESGHPPSADHLSSAEIEAIVAGLHTDPFSVLGVHAGANGFIARCFVPG
ADSITALTLDGSLAGELACLDPAGFFAGPVAIKSQQPVRYRACRGDVEWSLTDPYSFGPV
LGPMDDYFLREGSHLRLFDKMGAHPIKHQGVDGFHFAVWAPNARRVSVVGDFNEWDGRRH
VMRLRRDTGIWEIFAPDVRPGSAYKYEIIGVNGELLPLKADPFARRSEFRPQTASVTAAE
LSQDWEDAAHLAHWGSIDKRRQPISVYEVHAGSWQKRADGTFLSWDELAERLIPYCTEMG
FTHIEFLPITEHPYDPSWGYQTTGLYAPSARFGEPEGFARFVNGCHKVGLSVILDWVPAH
FPTDAHGLRFFDGTALYEHEDPRKGFHPDWNTAIYNYGRIEVLSYLVNNALYWAEKFHLD
GVRVDAVASMLYLDYSRKEGEWIPNEYGGRENLEAVRFLQKMNEHLYGAHPQVMTIAEES
TSWPKVSQPVHEGGLGFGFKWNMGFMHDTLSYFARDPVHRKHHHHEITFGLIYAYSENFM
LPISHDEVVHGKGSMIAKMPGDDWQKFANLRAYYGFMWGYPGKKLLFMGQEFAQWSEWSE
ERSLDWNLLQYPLHEGMRRLVRDLNFTYRNKPALHARDCEGEGFEWLISEDADQSVFAWL
RKTPGERPVAVIANLTPIYYQRYDVPLPVAGRWREILNTDAEIYGGSGKGNGGRVEAVLD
AATASDKAPWAHATLSLPPLAVVMLELEQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacaacaaggcagacgcaggtatcagccgagagcggccatccgccctccgct
gaccacctttcttctgccgagatcgaagccatcgtcgccggcctgcacaccgatccgttt
tcggtgctcggcgttcatgccggagcgaatgggttcattgcccgctgttttgtgccgggc
gccgacagcattaccgcgctcacgctcgacggcagccttgccggagagctggcctgtctt
gacccagccggctttttcgccggtccggtggcgatcaaatcccagcagccagtgcgctac
cgcgcctgccgtggcgatgtggaatggtcgctgaccgatccctatagtttcggcccggtt
ctcgggccgatggacgattacttcctgcgcgaagggtcgcatcttcggctgttcgacaag
atgggcgcccatccgatcaagcatcagggcgttgatggctttcatttcgccgtctgggcg
ccgaatgcaagacgggtctcggtggtcggcgatttcaatgaatgggatggacgccgccat
gtgatgcggctgcgccgcgataccggcatctgggagattttcgctcctgatgtccggcca
ggttcggcctataaatacgagatcatcggcgtcaatggcgagcttttgccgctgaaggcc
gatccgttcgcccgccgcagcgagtttcgcccgcagaccgcttctgtcaccgccgccgag
ctttcccaggactgggaagatgcggcacatctggcccattggggcagcatcgacaagcgc
cgccagccgatctcggtctatgaggtccatgccggttcctggcagaagcgtgcggacggc
accttccttagctgggacgagctggcggaacggctgatcccctattgcaccgaaatgggc
tttacccatatcgaatttctgcctatcaccgaacatccctatgacccgtcctggggctat
cagacaacagggctttacgcgccaagcgcgcggtttggcgagccggaaggctttgcccgc
ttcgtcaatggctgtcacaaggtcggcctcagcgtcattctcgattgggttccggcccat
ttcccgaccgatgcccatgggttgcggtttttcgacggcacggctctttatgagcatgag
gacccgcgcaagggcttccaccccgactggaacaccgccatctacaattacgggcggatc
gaggttctctcctatctggtcaacaatgcgctgtattgggcggaaaaattccacctggac
ggcgtgcgggtcgatgcagtcgcctcgatgctctatctcgactattcccgcaaggaaggc
gagtggatacccaacgaatatggcgggcgggaaaacctggaggcggtgcgcttcctgcaa
aagatgaacgagcatctctacggtgcccatccacaagtgatgaccattgccgaggaaagc
acttcctggccgaaagtgtcccagccggtccacgaaggcggtctcggcttcggcttcaag
tggaacatgggcttcatgcatgacacgctgagctattttgcccgcgaccccgtgcatcgc
aagcatcatcaccatgagattacctttggcctgatctatgcctatagcgaaaatttcatg
ctgccgatttcccatgacgaagtggtgcatggcaaaggctcgatgattgccaaaatgcct
ggagacgattggcaaaaatttgccaatcttcgcgcctattatggcttcatgtggggttat
cctggcaagaaattgctgtttatggggcaggaatttgcccagtggagcgaatggagcgag
gaacggtcgctggactggaacctgctgcaatatccgctgcatgagggcatgcgccgcctg
gtgcgtgatctgaactttacctatcgtaacaagccggcgctgcatgcccgcgattgcgag
ggtgaaggcttcgaatggctgatcagcgaggatgccgatcaatcggtctttgcctggctg
cgcaagacgcccggcgaaaggccggtggctgttatcgccaacctgacgccgatctattac
cagcgttacgacgtacctctgccggtggcaggccggtggcgggaaatcctcaataccgat
gccgagatctatggcggtagcggaaagggcaatggcggccgggtggaggccgtactcgat
gcggcaaccgcctctgacaaggcgccatgggcgcacgcaacgctgtcactgccgccgctg
gcggtggttatgctggagttggaacagtaa
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