Agrobacterium vitis VAT03-9: RvVAT039_28930
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Entry
RvVAT039_28930 CDS
T08809
Symbol
birA
Name
(GenBank) biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00780
Biotin metabolism
avv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
RvVAT039_28930 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avv03000
]
RvVAT039_28930 (birA)
Enzymes [BR:
avv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
RvVAT039_28930 (birA)
Transcription factors [BR:
avv03000
]
Prokaryotic type
Helix-turn-helix
Other families
RvVAT039_28930 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-ProteinID:
BCH65677
LinkDB
All DBs
Position
1:3149241..3150029
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AA seq
262 aa
AA seq
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MSDYSTHRRKALDAFRHIALDEVDSTNQQCLIRARDGDPGDLWITANRQTGGRGRRGRPW
ASEPGNLYSSLLLIDPAPLADLASLPLAVAVAVHDAIGVVLPSGAPPLEIKWPNDVLIGR
AKTSGILLEAERTPDGRNALVIGIGINLRFKPTETPYPTASLAEHGAAVTPDELFTHLFA
AMADALALWDRGRGVKAVMQRWRQVACGIGEKITVNLPDRSISGVFSGIDDKGILLLDRG
SLGITPVAAGDVFFEPNGPRKE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgactattccacccatcgtcggaaggcgctcgacgccttccgacatattgcgctg
gacgaggtggattccaccaaccagcaatgcttgatcagagcccgtgacggtgatccggga
gatctctggatcacagccaaccgccagacaggcgggcgagggcgtcgtggcaggccttgg
gcctcggagcccggcaatctctacagctctcttttattgatcgatccggcgcctttggcc
gatttggcttcgcttcctctggccgtggccgtggcggtgcatgatgcgattggcgtcgtg
ttgccgtcgggtgcaccgcctttggaaatcaaatggccgaatgatgtgctgattggtcgt
gccaagacctccggcattctgctggaagcggagcggacaccggatggacgaaacgctctg
gtcattggcattggcatcaatcttcgtttcaaacccactgaaacgccgtatcccacggcc
tcgctagccgagcatggcgcagccgttacgcctgatgagcttttcacgcatcttttcgcc
gccatggccgatgcactggcgctctgggatcggggccgtggcgtcaaggccgtgatgcag
cgctggcggcaggtggcttgtgggatcggtgagaaaatcaccgtcaatctcccggatcgg
tcgatttccggtgtgttttcaggaatcgatgataaagggatattattgctcgaccggggc
tcgctaggcatcacgccagttgcggcgggagatgtgtttttcgagccgaatgggccaagg
aaagaatga
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