Agrobacterium vitis VAT03-9: RvVAT039_pl07860
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Entry
RvVAT039_pl07860 CDS
T08809
Name
(GenBank) LysR family transcriptional regulator
Organism
avv
Agrobacterium vitis VAT03-9
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
BCH67953
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Position
pRvVAT039b:complement(244481..245299)
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AA seq
272 aa
AA seq
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MPRSTVTDAVKQLEARLGVRLLQRTTRHVSATLDGEAYYQRCISILDDIDDAEGAFAGAV
PKGLLRVDVHGTLARHFVLPNLQSFFAKYPGVDLYMTEGDRFVDLVREGIDCVLRVGEPQ
GGDMIGRRVAILEEITCASPKYLERYGTPKTLDDLANHAMVGFRSSASGGLISLEFSVGG
KVVTRELPTTITVNAAESFIASAKEGFGLIQIPRYHAQKNLDDCTLIHILQEFPPTPTPV
SLFYPPNRQLSPRVRVFIDWLIGVFRETPIKP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcgatcgaccgtcaccgatgcggtcaaacagctggaagctcggctcggcgtgcga
ctattgcagcgaaccacgcgccatgtcagcgcgacgctggacggtgaagcctactatcag
cgctgcatctcgatactggatgatatcgacgatgccgaaggcgcgtttgccggcgcggtt
cccaaggggctgcttcgggtggacgtgcacgggacgctcgcccgtcatttcgtcctgcca
aaccttcagtcttttttcgcaaagtatcccggcgtcgatctttacatgaccgagggagac
aggttcgtcgaccttgtgcgcgaaggcatcgactgcgttctgcgcgtaggcgaaccacaa
ggcggcgacatgattggccgccgtgtggcaattcttgaggaaatcacctgcgcctcaccg
aagtaccttgagcgctacggcacccccaagaccctcgacgatcttgcaaaccacgccatg
gtcggctttcgatcctccgcaagcggagggctaatctccttggaattcagcgtcggtggc
aaggtggtcacacgggagctgccgacgacgattaccgtcaatgctgcggagagctttatt
gcatcggcgaaagaaggcttcggtctgatccagataccgcggtatcacgctcaaaaaaac
ctcgacgactgcacgctcatccacattcttcaagagttccccccgacgccgacacccgtc
tcacttttctacccgccaaaccggcaactttcgccgcgcgtgcgggtgtttatagattgg
ctgatcggtgtttttcgtgagacgccgatcaaaccgtaa
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